PFAM Domains • Camillea tinctor CBS 203.56 v1.0
Annotations/GenomesAntav1Bisnum1CtCBS203_1DalEC12_1Entma1HypEC38_3Xylhyp1TotalAnnotation Description
PFAMs
10,48610,39411,0438,53210,2119,14911,45971,274
1127 transmembrane receptor (rhodopsin family)
121267 transmembrane receptor (Secretin family)
88546053505862425ATPase family associated with various cellular activities (AAA)
49384343384745303ABC transporter
444444428ATP synthase alpha/beta family, nucleotide-binding domain
14151514151415102Elongation factor Tu GTP binding domain
13891011101172Helix-loop-helix DNA-binding domain
222212112Hsp20/alpha crystallin family
8101071171568Hsp70 protein
878879754KH domain
1113SH2 domain
27121226122511125SH3 domain
9101010991067Actin
172252766168932427Ankyrin repeat
212312112PAN domain
788878753ADP-ribosylation factor family
22222217221621142Eukaryotic aspartyl protease
444444428Cyclic nucleotide-binding domain
112Cytochrome b(C-terminal)/b6/petD
11Cytochrome b/b6/petB
11111117Cytochrome c
112Double-stranded RNA binding motif
172119318262EF hand
11134Fe-4S binding domain
211212110Fibronectin type III domain
222223215Globin
2081215151911100Glutathione S-transferase, C-terminal domain
21111129Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
855858544Homeodomain
322222215lactate/malate dehydrogenase, NAD binding domain
444445429Myosin head (motor domain)
2381221701181291601941,131Cytochrome P450
181115136113133125174977Protein kinase domain
19131317141418108Pyridine nucleotide-disulphide oxidoreductase
28282925272630193Ras family
1311111310121484Response regulator receiver domain
1255264741RNase H
60515259576049388RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
11Reverse transcriptase (RNA-dependent DNA polymerase)
233232318Copper/zinc superoxide dismutase (SODC)
222222214Iron/manganese superoxide dismutases, alpha-hairpin domain
17252620182121148Subtilase family
59787959536959456Sugar (and other) transporter
1312121112131285Thioredoxin
4121513Trypsin
566445535Tubulin/FtsZ family, GTPase domain
5114415von Willebrand factor type A domain
91232163257029322Zinc finger, C2H2 type
5477437455168Zinc finger, C3HC4 type (RING finger)
10331116337Zinc knuckle
222222214Protein-tyrosine phosphatase
2001151231471171701611,033short chain dehydrogenase
99536763527175480Zinc-binding dehydrogenase
666565640Thiolase, N-terminal domain
69343528333757293Beta-ketoacyl synthase, N-terminal domain
7458574402Fe-2S iron-sulfur cluster binding domain
112Papain family cysteine protease
11111117Enolase, C-terminal TIM barrel domain
112Cytochrome C and Quinol oxidase polypeptide I
119981181066Glutamine amidotransferase class-I
1010101010101070TCP-1/cpn60 chaperonin family
11ATP synthase A chain
444435327Glutamine synthetase, catalytic domain
222222214Triosephosphate isomerase
15212118191820132E1-E2 ATPase
1287888859Core histone H2A/H2B/H3/H4
11Copper binding proteins, plastocyanin/azurin family
677444537Alpha amylase, catalytic domain
222222214Phorbol esters/diacylglycerol binding domain (C1 domain)
777787851Bacterial transferase hexapeptide (six repeats)
455363531tRNA synthetases class I (I, L, M and V)
1077686852Cyclin, N-terminal domain
27182119141822139Carboxylesterase family
444454429DNA polymerase family B
644545533ATP synthase subunit C
555566638Peroxidase
18781015131889Beta-lactamase
444333425C-5 cytosine-specific DNA methylase
11NADH dehydrogenase
28232226242527175Calcineurin-like phosphoesterase
10152012171217103Cellulase (glycosyl hydrolase family 5)
877878752tRNA synthetases class II (D, K and N)
38373738373939265Mitochondrial carrier protein
1113recA bacterial DNA recombination protein
19182316211521133Aminotransferase class I and II
864857442Phosphoribosyl transferase domain
1010101010101070Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1124Ribosome inactivating protein
11111117Phosphoglycerate kinase
222222214Ribosomal protein S4/S9 N-terminal domain
222222214Ribosomal protein S12/S23
1111116Bacterial regulatory helix-turn-helix proteins, AraC family
11111117Chaperonin 10 Kd subunit
1311101210121078C2 domain
188919818989PH domain
1117141015101794bZIP transcription factor
20202418221823145Aldehyde dehydrogenase family
2321561881701501961901,282Fungal Zn(2)-Cys(6) binuclear cluster domain
25242523232425169Cytochrome b5-like Heme/Steroid binding domain
422433321Oxidoreductase molybdopterin binding domain
17121418141817110Oxidoreductase NAD-binding domain
33272826263131202SNF2 family N-terminal domain
222221213Ribosomal protein S7p/S5e
23212121222122151Ubiquitin-conjugating enzyme
788676749Isocitrate/isopropylmalate dehydrogenase
222222214Ribosomal Proteins L2, RNA binding domain
11111117Hsp90 protein
222222214Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111117Dihydrofolate reductase
543615327Chitin recognition protein
222323317Cysteine-rich secretory protein family
11111117Ribosomal protein S3, C-terminal domain
444434326Cupin
221313113Annexin
11111117Eukaryotic-type carbonic anhydrase
211121210Chalcone and stilbene synthases, N-terminal domain
3333333212-oxoacid dehydrogenases acyltransferase (catalytic domain)
546738538Catalase
11111117Disintegrin
14421315UDP-glucoronosyl and UDP-glucosyl transferase
9119768757Aminotransferase class-III
232223216Ribosomal protein S19
11111117DNA gyrase B
744445432Thiamine pyrophosphate enzyme, central domain
454333325Lyase
222232215Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
112Sodium:neurotransmitter symporter family
11111117Adenylate and Guanylate cyclase catalytic domain
11111117ATP synthase delta (OSCP) subunit
11111117Orotidine 5'-phosphate decarboxylase / HUMPS family
11111117Indole-3-glycerol phosphate synthase
22122110Aromatic amino acid lyase
11111117Pyruvate kinase, barrel domain
1212121211121384Kinesin motor domain
31362926283030210DnaJ domain
1413141414141497Proteasome subunit
23242215Major intrinsic protein
11111117ATP synthase
112112210Glycosyl hydrolase family 1
111111173'5'-cyclic nucleotide phosphodiesterase
11111117Profilin
122121211Ribosomal protein L22p/L17e
233222216Ribosomal protein L14p/L23e
1110791010966Ubiquitin family
555555535Cofilin/tropomyosin-type actin-binding protein
23323231814-3-3 protein
521525222Alkaline phosphatase
655565638Zinc carboxypeptidase
39323634273633237Aldo/keto reductase family
157912717673Myb-like DNA-binding domain
844444331Forkhead domain
2211118Glycosyl hydrolases family 32 N-terminal domain
122121211Ribosomal protein L16p/L10e
322222215Ribosomal protein S14p/S29e
433333322FKBP-type peptidyl-prolyl cis-trans isomerase
11111117Glutathione peroxidase
3227
858767748Flavodoxin
11111117Calreticulin family
1491212981478Common central domain of tyrosinase
119101112101174Aminotransferase class-V
11111117Ribonucleotide reductase, small chain
41454345444247307DEAD/DEAH box helicase
93757578708080551Helicase conserved C-terminal domain
11111117EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
222222214Ribosomal protein L23
11111117Pyridoxal-dependent decarboxylase, C-terminal sheet domain
11221119Ribosomal protein L5
778676849Pyridoxal-dependent decarboxylase conserved domain
854343633Citrate synthase, C-terminal domain
555555535GHMP kinases N terminal domain
866766645Biotin carboxylase, N-terminal domain
11111117Tryptophan synthase alpha chain
1011111111121177Pyridoxal-phosphate dependent enzyme
24181719172016131NUDIX domain
766686847pfkB family carbohydrate kinase
765373738Glycosyl hydrolases family 28
332210Luciferase-like monooxygenase
222222214Ribosomal protein L3
222212213Ribosomal protein L11, RNA binding domain
18191916171816123Histidine phosphatase superfamily (branch 1)
11111117Thymidylate synthase
441312Lipoxygenase
444444428ATP synthase alpha/beta chain, C terminal domain
555455534Calponin homology (CH) domain
522436224Glutamine amidotransferases class-II
222122213Ribosomal protein S15
21111118Thaumatin family
222222214Fructose-1-6-bisphosphatase, N-terminal domain
11111117Ribonucleotide reductase, all-alpha domain
222122213Ribosomal protein S2
313222215SRF-type transcription factor (DNA-binding and dimerisation domain)
666676643GATA zinc finger
34161833123715165Amino acid permease
667565742Prolyl oligopeptidase family
222212213Ribosomal protein L30p/L7e
6771069550Histidine phosphatase superfamily (branch 2)
11111117Respiratory-chain NADH dehydrogenase, 30 Kd subunit
644544532Aconitase family (aconitate hydratase)
323323218Glycosyl hydrolase family 10
421414218Glycosyl hydrolases family 17
222222214Ribosomal protein S5, N-terminal domain
11111117Nucleoside diphosphate kinase
11125Tetraspanin family
122121211Ribosomal protein S10p/S20e
333342321Arrestin (or S-antigen), N-terminal domain
11111117Phosphoglucose isomerase
11111117Carbohydrate phosphorylase
11111117SecY translocase
11111117Respiratory-chain NADH dehydrogenase, 49 Kd subunit
222222214Ribosomal protein L6
1033353431Polyprenyl synthetase
444535530Hexokinase
11151281291784Dynamin family
31111119Transcription factor TFIID (or TATA-binding protein, TBP)
776676544Rieske [2Fe-2S] domain
1111116Phytochrome region
314Proton-conducting membrane transporter
988988757Biotin-requiring enzyme
11111117Phosphofructokinase
122222112Ribosomal protein S17
11111117Hydroxymethylglutaryl-coenzyme A reductase
333333220FGGY family of carbohydrate kinases, N-terminal domain
1688811101273Enoyl-CoA hydratase/isomerase
222222214Ribosomal protein S9/S16
222222214Transcription factor TFIIB repeat
899879959Cytidine and deoxycytidylate deaminase zinc-binding region
11111117Molybdopterin oxidoreductase
1266957651Chromo (CHRromatin Organisation MOdifier) domain
444444428Phosphatidylinositol-specific phospholipase C, Y domain
555565637Phosphatidylinositol-specific phospholipase C, X domain
81212967963D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
222222214Malic enzyme, N-terminal domain
2222121126-phosphogluconate dehydrogenase, C-terminal domain
14141381291383Multicopper oxidase
1111910910969WW domain
122112211Ribosomal RNA adenine dimethylase
1113Yeast PIR protein repeat
122106106103106108108759WD domain, G-beta repeat
455446432Heavy-metal-associated domain
577363637Adenylate kinase
222222214Phosphoglucomutase/phosphomannomutase, C-terminal domain
122122313Ribosomal protein S8
222222214Ribosomal protein S11
443444427LIM domain
112Matrixin
243264526Regulator of chromosome condensation (RCC1) repeat
222222214Ribosomal protein S13/S18
322242318chorismate binding enzyme
33333332160s Acidic ribosomal protein
444444529Prenyltransferase and squalene oxidase repeat
645656537Protein kinase C terminal domain
11111117Single-strand binding protein family
11111117S-adenosylmethionine synthetase, N-terminal domain
989898859Bromodomain
1291161191371Acyl-CoA dehydrogenase, C-terminal domain
1413131413141394Ubiquitin carboxyl-terminal hydrolase
1111116Ribosomal protein L36
422242521Ribonuclease T2 family
333333220HSF-type DNA-binding
222232316SRP54-type protein, GTPase domain
11111117Urease alpha-subunit, N-terminal domain
1079988758Serine carboxypeptidase
888888856Phosphatidylinositol 3- and 4-kinase
123121212Transketolase, thiamine diphosphate binding domain
1022332527Glycosyl hydrolases family 11
433343424Inositol monophosphatase family
444444428Glutaredoxin
522524222Isocitrate lyase family
222222214Serine hydroxymethyltransferase
221414317Iron-containing alcohol dehydrogenase
222222214Ribosomal protein L10
423444324KOW motif
111115Ribosomal protein L34
11114Ribosomal protein L33
333333321RF-1 domain
222324217Sodium:solute symporter family
11111117Imidazoleglycerol-phosphate dehydratase
11111117DNA polymerase family A
11111117IMP dehydrogenase / GMP reductase domain
11111117Glucose-6-phosphate dehydrogenase, NAD binding domain
766666744Protein phosphatase 2C
222222214Nucleotidyl transferase
633333425Carbonic anhydrase
112121210Phosphoribulokinase / Uridine kinase family
788555745Fatty acid desaturase
666666642MutS domain V
11112118Delta-aminolevulinic acid dehydratase
545434429Arginase family
666666642MCM P-loop domain
232232317Squalene/phytoene synthase
91012101010970FHA domain
11NADH-ubiquinone/plastoquinone oxidoreductase chain 6
79476043514759386AMP-binding enzyme
533344426G-protein alpha subunit
19888108970HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
107710891061His Kinase A (phospho-acceptor) domain
333333321Armadillo/beta-catenin-like repeat
32111226132612132Tetratricopeptide repeat
333424322Ion transport protein
11111117DNA gyrase/topoisomerase IV, subunit A
10789611657BRCA1 C Terminus (BRCT) domain
656636436Glycosyl transferases group 1
422324219Glycosyl transferase family 2
131111210SAM domain (Sterile alpha motif)
11111117linker histone H1 and H5 family
11111117Ribosomal protein L7/L12 C-terminal domain
754171429Pectate lyase
432323320ribonuclease
11111117Urease, gamma subunit
444444428CoA-ligase
60375120423166307Phosphopantetheine attachment site
333342321Formyl transferase
9101191191271Metallopeptidase family M24
133115316253Leucine Rich Repeat
57101038115115192alpha/beta hydrolase fold
333333321RNA polymerase Rpb2, domain 6
444443427PB1 domain
222222214Staphylococcal nuclease homologue
9121291291275Rab-GTPase-TBC domain
11111117Tudor domain
11111117WH1 domain
443353325Zinc finger, ZZ type
222212213HRDC domain
966869650CBS domain
222222214Ribosomal protein L13
222222214Ribosomal protein L4/L1 family
11111117Clp protease
444545430S1 RNA binding domain
11111117HIUase/Transthyretin family
533536328AhpC/TSA family
444444428tRNA synthetases class I (W and Y)
1211117UvrD/REP helicase N-terminal domain
587795849Rhodanese-like domain
222222214Universal stress protein family
56283441284033260Acetyltransferase (GNAT) family
1111116SecE/Sec61-gamma subunits of protein translocation complex
11111117C-terminal regulatory domain of Threonine dehydratase
222222214AIR synthase related protein, N-terminal domain
877888955tRNA synthetase class II core domain (G, H, P, S and T)
11111117SpoU rRNA Methylase family
222222214Tetrapyrrole (Corrin/Porphyrin) Methylases
11111117Glycosyl transferase family, a/b domain
1113PDZ domain
546343631Class II Aldolase and Adducin N-terminal domain
444444428Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
554555534Fes/CIP4, and EFC/F-BAR homology domain
522425222IQ calmodulin-binding motif
222222214Phosphoinositide 3-kinase family, accessory domain (PIK domain)
533536227Phospholipase D Active site motif
155141421Regulator of G protein signaling domain
444444428GTPase-activator protein for Ras-like GTPase
444344427RasGEF domain
444344427RasGEF N-terminal motif
1099999964RhoGAP domain
666666642RhoGEF domain
336333324SPRY domain
333333321RNA polymerase Rpb1, domain 2
322232317Guanylate kinase
544434428Gelsolin repeat
645646536UBA/TS-N domain
178101715171498PHD-finger
11111117GGL domain
666666642HECT-domain (ubiquitin-transferase)
211212110Helix-hairpin-helix motif
11111117MSP (Major sperm protein) domain
533435427Ribonuclease III domain
244232421Region in Clathrin and VPS
321233317RanBP1 domain
222222214PPIC-type PPIASE domain
332423219Zn-finger in Ran binding protein and others
1810817818887Zinc finger C-x8-C-x5-C-x3-H type (and similar)
422323319Poly(ADP-ribose) polymerase catalytic domain
11111117Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
5912136696617242F-box domain
11111117Elongation factor 1 gamma, conserved domain
433444527Calpain family cysteine protease
111222211Copper fist DNA binding domain
866585745CRAL/TRIO domain
1091231251061BTB/POZ domain
222213214Ricin-type beta-trefoil lectin domain
11111128Inhibitor of Apoptosis domain
333333321Voltage gated chloride channel
836526434Caspase domain
1877157151281GDSL-like Lipase/Acylhydrolase
11111117Poly-adenylate binding protein, unique domain
29192322202323159ABC transporter transmembrane region
678757949FAD binding domain
3410139131114104Condensation domain
11111117S-adenosyl-L-homocysteine hydrolase, NAD binding domain
11111117HAMP domain
222222214ribosomal L5P family C-terminus
556565638Insulinase (Peptidase family M16)
333333321Dehydrogenase E1 component
11111117Lumazine binding domain
566666641Elongation factor G C-terminus
544654432HMGL-like
444444428DnaJ central domain
323233420Starch binding domain
233332319Ribosomal protein L1p/L10e family
799877855Cation transporting ATPase, C-terminus
9101011910968Cation transporter/ATPase, N-terminus
11112118dUTPase
644544633Aconitase C-terminal domain
444444428Amino acid kinase family
11111117N-(5'phosphoribosyl)anthranilate (PRA) isomerase
66323328333960291Acyl transferase domain
11111117Urease beta subunit
689565645Dihydrodipicolinate synthetase family
35171735153815172haloacid dehalogenase-like hydrolase
866697951Glycosyl hydrolases family 2
24131416161720120Glycosyl hydrolases family 18
11111117Proliferating cell nuclear antigen, N-terminal domain
111216Translation initiation factor IF-3, C-terminal domain
11111117Acylphosphatase
312212213Adenylosuccinate synthetase
122112110Asparaginase, N-terminal
313323318Peptidase S24-like
11111117Inorganic pyrophosphatase
14191813151316108Glycosyl hydrolases family 16
322232317Glycosyl hydrolases family 15
1076968854NADH:flavin oxidoreductase / NADH oxidase family
111111173-hydroxyacyl-CoA dehydrogenase, C-terminal domain
333332320Glycosyl hydrolase family 20, catalytic domain
567466741HhH-GPD superfamily base excision DNA repair protein
11111117AIR carboxylase
34303928283435228GMC oxidoreductase
333222217Asparagine synthase
2261161271781Fungal cellulose binding domain
566565639Septin
11111117EF-1 guanine nucleotide exchange domain
11111117Homoserine dehydrogenase
388324129Flavin-binding monooxygenase-like
11LPXTG cell wall anchor motif
533333424tRNA synthetases class I (E and Q), catalytic domain
311112110tRNA synthetases class I (R)
444434427XPG N-terminal domain
126107610657Metallo-beta-lactamase superfamily
1111116F5/8 type C domain
434232422Choline/Carnitine o-acyltransferase
211222111Putative esterase
11111117Ferrochelatase
222222214Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
111121411Arginosuccinate synthase
11111117Electron transfer flavoprotein FAD-binding domain
333333321RNB domain
81112777860Dioxygenase
333333321CNH domain
222222214Diacylglycerol kinase catalytic domain
877777750Dual specificity phosphatase, catalytic domain
322223216P21-Rho-binding domain
1312121313111387PX domain
322323217Ras association (RalGDS/AF-6) domain
544545431UBX domain
444444428VHS domain
11111117Phosphoinositide 3-kinase C2
222222315DAHP synthetase I family
9121111911972Carbon-nitrogen hydrolase
2121129N-acetyltransferase
11111117Prephenate dehydratase
444444428Syntaxin
544545431Pumilio-family RNA binding repeat
677677747Histone-like transcription factor (CBF/NF-Y) and archaeal histone
11111117Pterin binding enzyme
222222214ER lumen protein retaining receptor
322222215Glycoprotease family
11121219Histidinol dehydrogenase
444444428impB/mucB/samB family
1113
11111117Ribosomal L15
133141417Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
11111117Ribosomal L28 family
11111117Ribosomal L29 protein
11111117Ribosomal L39 protein
11111117Ribosomal S17
11111117Ribulose-phosphate 3 epimerase family
11111117Translationally controlled tumour protein
744555535Glycosyl hydrolase family 7
21115Ring hydroxylating alpha subunit (catalytic domain)
11111117RNA pseudouridylate synthase
443444427Histone deacetylase domain
644664535POT family
11111117PWWP domain
22211919202023144SET domain
117787121062Isochorismatase family
333333321Permease family