PFAM Domains • Porodaedalea chrysoloma FP-135951 v1.0
Annotations/GenomesFomme1Onnsc1Porchr1Pornie1_2Schpa1Triab1_1TotalAnnotation Description
PFAMs
7,6007,20810,12610,5528,8588,60552,949
117 transmembrane receptor (rhodopsin family)
414248455147274ATPase family associated with various cellular activities (AAA)
374447535451286ABC transporter
415454436ATP synthase alpha/beta family, nucleotide-binding domain
11EGF-like domain
14141414161688Elongation factor Tu GTP binding domain
12111311121069Helix-loop-helix DNA-binding domain
7616137857Hsp20/alpha crystallin family
91314119763Hsp70 protein
88768946KH domain
1113SH2 domain
282815182629144SH3 domain
12201415121386Actin
2023592823108Ankyrin repeat
777781349ADP-ribosylation factor family
354641442737230Eukaryotic aspartyl protease
33333318Cyclic nucleotide-binding domain
1111116Cytochrome c
8111111131468Double-stranded RNA binding motif
151733212281EF hand
111254Fe-4S binding domain
1111116Fibronectin type III domain
19769161875Glutathione S-transferase, C-terminal domain
1211117Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
9910119755Homeodomain
22332214lactate/malate dehydrogenase, NAD binding domain
54545730Myosin head (motor domain)
120116126133206181882Cytochrome P450
2441482582952922511,488Protein kinase domain
1717910161584Pyridine nucleotide-disulphide oxidoreductase
242427282424151Ras family
99101112960Response regulator receiver domain
14564222RNase H
596163596260364RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
66Reverse transcriptase (RNA-dependent DNA polymerase)
1111116Copper/zinc superoxide dismutase (SODC)
22332214Iron/manganese superoxide dismutases, alpha-hairpin domain
58111162667Subtilase family
322543482834210Sugar (and other) transporter
1210999958Thioredoxin
55574430Tubulin/FtsZ family, GTPase domain
327214von Willebrand factor type A domain
546421205661276Zinc finger, C2H2 type
485210115758236Zinc finger, C3HC4 type (RING finger)
141477202587Zinc knuckle
22222212Protein-tyrosine phosphatase
9559847897113526short chain dehydrogenase
513151634253291Zinc-binding dehydrogenase
56554429Thiolase, N-terminal domain
67542630Beta-ketoacyl synthase, N-terminal domain
331133142Fe-2S iron-sulfur cluster binding domain
2111218Enolase, C-terminal TIM barrel domain
8811128754Glutamine amidotransferase class-I
1311121410969TCP-1/cpn60 chaperonin family
11ATP synthase A chain
33333318Glutamine synthetase, catalytic domain
1111116Triosephosphate isomerase
12111215111172E1-E2 ATPase
161718161718102Core histone H2A/H2B/H3/H4
1236Copper binding proteins, plastocyanin/azurin family
57111011953Alpha amylase, catalytic domain
55555530Phorbol esters/diacylglycerol binding domain (C1 domain)
24336321Bacterial transferase hexapeptide (six repeats)
33554323tRNA synthetases class I (I, L, M and V)
81099111057Cyclin, N-terminal domain
221221221724118Carboxylesterase family
33333318DNA polymerase family B
24333318ATP synthase subunit C
18619221917101Peroxidase
11474522Beta-lactamase
54445426C-5 cytosine-specific DNA methylase
11NADH dehydrogenase
302321282626154Calcineurin-like phosphoesterase
151326231218107Cellulase (glycosyl hydrolase family 5)
55755532tRNA synthetases class II (D, K and N)
343636403440220Mitochondrial carrier protein
14111516131483Aminotransferase class I and II
55446630Phosphoribosyl transferase domain
12121214131174Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111116Phosphoglycerate kinase
22222212Ribosomal protein S4/S9 N-terminal domain
32223214Ribosomal protein S12/S23
1111116Chaperonin 10 Kd subunit
291726241215123C2 domain
1821108192197PH domain
669108645bZIP transcription factor
16151818151698Aldehyde dehydrogenase family
8273758711890525Fungal Zn(2)-Cys(6) binuclear cluster domain
212322272022135Cytochrome b5-like Heme/Steroid binding domain
211138Oxidoreductase molybdopterin binding domain
677710744Oxidoreductase NAD-binding domain
202223242224135SNF2 family N-terminal domain
22222212Ribosomal protein S7p/S5e
212121222620131Ubiquitin-conjugating enzyme
66676637Isocitrate/isopropylmalate dehydrogenase
22222212Ribosomal Proteins L2, RNA binding domain
32342216Hsp90 protein
32342115Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111116Dihydrofolate reductase
112Chitin recognition protein
12224213Cysteine-rich secretory protein family
1111116Ribosomal protein S3, C-terminal domain
22213515Cupin
343533212-oxoacid dehydrogenases acyltransferase (catalytic domain)
22222414Catalase
1111116Disintegrin
71891228UDP-glucoronosyl and UDP-glucosyl transferase
55655531Aminotransferase class-III
22222212Ribosomal protein S19
1111116DNA gyrase B
32333418Thiamine pyrophosphate enzyme, central domain
33333318Lyase
12221210Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
3111118Adenylate and Guanylate cyclase catalytic domain
1111116ATP synthase delta (OSCP) subunit
1111116Orotidine 5'-phosphate decarboxylase / HUMPS family
2211219Indole-3-glycerol phosphate synthase
1112128Aromatic amino acid lyase
1111116Pyruvate kinase, barrel domain
10991191159Kinesin motor domain
272930363228182DnaJ domain
14141616141690Proteasome subunit
22224315Major intrinsic protein
1111116ATP synthase
52454323Glycosyl hydrolase family 1
11111163'5'-cyclic nucleotide phosphodiesterase
1111116Profilin
22221211Ribosomal protein L22p/L17e
22212211Ribosomal protein L14p/L23e
161617211815103Ubiquitin family
56584634Cofilin/tropomyosin-type actin-binding protein
2222221214-3-3 protein
11349Alkaline phosphatase
1111116Zinc carboxypeptidase
562546505559291Aldo/keto reductase family
111387131567Myb-like DNA-binding domain
56665735Forkhead domain
14211110Ribosomal protein L16p/L10e
12222211Ribosomal protein S14p/S29e
33333318FKBP-type peptidyl-prolyl cis-trans isomerase
1111116Glutathione peroxidase
22116
77668539Flavodoxin
11Protamine P1
1111116Calreticulin family
1451213Common central domain of tyrosinase
679107645Aminotransferase class-V
11115211Ribonucleotide reductase, small chain
414449516256303DEAD/DEAH box helicase
697578809689487Helicase conserved C-terminal domain
1112117Fructose-bisphosphate aldolase class-I
1111116EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22222212Ribosomal protein L23
1111116Pyridoxal-dependent decarboxylase, C-terminal sheet domain
1111116Ribosomal protein L5
46446630Pyridoxal-dependent decarboxylase conserved domain
32453320Citrate synthase, C-terminal domain
56555531GHMP kinases N terminal domain
671096846Biotin carboxylase, N-terminal domain
1111116Tryptophan synthase alpha chain
87897847Pyridoxal-phosphate dependent enzyme
15141917131492NUDIX domain
44445425pfkB family carbohydrate kinase
14191251253Glycosyl hydrolases family 28
22222212Ribosomal protein L3
13222212Ribosomal protein L11, RNA binding domain
711799750Histidine phosphatase superfamily (branch 1)
1111116Thymidylate synthase
412454433ATP synthase alpha/beta chain, C terminal domain
44463425Calponin homology (CH) domain
55335526Glutamine amidotransferases class-II
22222212Ribosomal protein S15
83781532Thaumatin family
1111116Fructose-1-6-bisphosphatase, N-terminal domain
1111127Ribonucleotide reductase, all-alpha domain
32992227Ribosomal protein S2
13333215SRF-type transcription factor (DNA-binding and dimerisation domain)
9999121159GATA zinc finger
21208122123105Amino acid permease
66586637Prolyl oligopeptidase family
1122118Ribosomal protein L30p/L7e
1081314111066Histidine phosphatase superfamily (branch 2)
1111116Respiratory-chain NADH dehydrogenase, 30 Kd subunit
74554530Aconitase family (aconitate hydratase)
445551033Glycosyl hydrolase family 10
1111116Glycosyl hydrolases family 17
22222212Ribosomal protein S5, N-terminal domain
22222212Nucleoside diphosphate kinase
32444118Tetraspanin family
22221211Ribosomal protein S10p/S20e
35543323Arrestin (or S-antigen), N-terminal domain
1111116Phosphoglucose isomerase
1111116Carbohydrate phosphorylase
11241110SecY translocase
1111116Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222212Ribosomal protein L6
33334521Polyprenyl synthetase
22222212Hexokinase
77121211756Dynamin family
1111116Transcription factor TFIID (or TATA-binding protein, TBP)
55573530Rieske [2Fe-2S] domain
11Bacterial regulatory proteins, lacI family
112Phytochrome region
33Proton-conducting membrane transporter
89910101359Biotin-requiring enzyme
1111116Phosphofructokinase
22222212Ribosomal protein S17
1121117Hydroxymethylglutaryl-coenzyme A reductase
44333421FGGY family of carbohydrate kinases, N-terminal domain
129101191061Enoyl-CoA hydratase/isomerase
22222212Ribosomal protein S9/S16
42223215Transcription factor TFIIB repeat
58777842Cytidine and deoxycytidylate deaminase zinc-binding region
2111117Molybdopterin oxidoreductase
115108151059Chromo (CHRromatin Organisation MOdifier) domain
12222413Phosphatidylinositol-specific phospholipase C, Y domain
14332417Phosphatidylinositol-specific phospholipase C, X domain
67667638D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
22222212Malic enzyme, N-terminal domain
11111276-phosphogluconate dehydrogenase, C-terminal domain
1187761857Multicopper oxidase
91010109957WW domain
22222212Ribosomal RNA adenine dimethylase
190131161134172151939WD domain, G-beta repeat
33333318Heavy-metal-associated domain
33333318Adenylate kinase
22331213Phosphoglucomutase/phosphomannomutase, C-terminal domain
1122219Ribosomal protein S8
12322111Ribosomal protein S11
75556634LIM domain
11Matrixin
238114533Regulator of chromosome condensation (RCC1) repeat
22222212Ribosomal protein S13/S18
11
22222212chorismate binding enzyme
3333431960s Acidic ribosomal protein
54444425Prenyltransferase and squalene oxidase repeat
77567638Protein kinase C terminal domain
111115Single-strand binding protein family
1111116S-adenosylmethionine synthetase, N-terminal domain
12101211101065Bromodomain
88889950Acyl-CoA dehydrogenase, C-terminal domain
14141917151594Ubiquitin carboxyl-terminal hydrolase
1111116Ribosomal protein L36
42433420Ribonuclease T2 family
44443423HSF-type DNA-binding
22222212SRP54-type protein, GTPase domain
1111116Urease alpha-subunit, N-terminal domain
14141316191995Serine carboxypeptidase
88889849Phosphatidylinositol 3- and 4-kinase
1111116Transketolase, thiamine diphosphate binding domain
11Glycosyl hydrolases family 11
11114WHEP-TRS domain
32222213Inositol monophosphatase family
44444424Glutaredoxin
33223316Isocitrate lyase family
111115Serine hydroxymethyltransferase
33443320Iron-containing alcohol dehydrogenase
11222210Ribosomal protein L10
56555531KOW motif
1111116Ribosomal protein L34
112Ribosomal protein L33
23442419RF-1 domain
22322415Sodium:solute symporter family
1111116Imidazoleglycerol-phosphate dehydratase
1111116DNA polymerase family A
14131111IMP dehydrogenase / GMP reductase domain
1111116Glucose-6-phosphate dehydrogenase, NAD binding domain
88889950Protein phosphatase 2C
43432319Nucleotidyl transferase
23224417Carbonic anhydrase
1111116Phosphoribulokinase / Uridine kinase family
86869946Fatty acid desaturase
66676637MutS domain V
1111116Delta-aminolevulinic acid dehydratase
34333420Arginase family
67676638MCM P-loop domain
11341111Squalene/phytoene synthase
91011991058FHA domain
11NADH-ubiquinone/plastoquinone oxidoreductase chain 6
262935323144197AMP-binding enzyme
12121312151377G-protein alpha subunit
241722321727139HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
123Cytochrome c oxidase subunit III
56767839His Kinase A (phospho-acceptor) domain
22334317Armadillo/beta-catenin-like repeat
632315143636187Tetratricopeptide repeat
34333420Ion transport protein
1111116DNA gyrase/topoisomerase IV, subunit A
985871148BRCA1 C Terminus (BRCT) domain
58556433Glycosyl transferases group 1
33233620Glycosyl transferase family 2
112SAM domain (Sterile alpha motif)
44353322linker histone H1 and H5 family
111115Ribosomal protein L7/L12 C-terminal domain
1124Pectate lyase
1111116ribonuclease
1111116Urease, gamma subunit
33333318CoA-ligase
81012106854Phosphopantetheine attachment site
22222212Formyl transferase
1091112101062Metallopeptidase family M24
151533161567Leucine Rich Repeat
493311114548197alpha/beta hydrolase fold
33433319RNA polymerase Rpb2, domain 6
358104434PB1 domain
22832219Staphylococcal nuclease homologue
9912119959Rab-GTPase-TBC domain
1111116Tudor domain
1111116WH1 domain
34334623Zinc finger, ZZ type
1111116HRDC domain
88578844CBS domain
22222212Ribosomal protein L13
213232224Ribosomal protein L4/L1 family
1111116Clp protease
43434422S1 RNA binding domain
111126HIUase/Transthyretin family
45445527AhpC/TSA family
44444424tRNA synthetases class I (W and Y)
112UvrD/REP helicase N-terminal domain
33994432Rhodanese-like domain
22222212Universal stress protein family
282617153627149Acetyltransferase (GNAT) family
11114SecE/Sec61-gamma subunits of protein translocation complex
1111116C-terminal regulatory domain of Threonine dehydratase
22222212AIR synthase related protein, N-terminal domain
6640337698tRNA synthetase class II core domain (G, H, P, S and T)
52322216Tetrapyrrole (Corrin/Porphyrin) Methylases
1112117Glycosyl transferase family, a/b domain
436136335Class II Aldolase and Adducin N-terminal domain
34444322Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
55555530Fes/CIP4, and EFC/F-BAR homology domain
35336525IQ calmodulin-binding motif
22222212Phosphoinositide 3-kinase family, accessory domain (PIK domain)
33114416Phospholipase D Active site motif
11431111Regulator of G protein signaling domain
44445425GTPase-activator protein for Ras-like GTPase
6991013855RasGEF domain
777710846RasGEF N-terminal motif
14131313131278RhoGAP domain
12141717141387RhoGEF domain
43455627SPRY domain
334113327RNA polymerase Rpb1, domain 2
111115Guanylate kinase
23335218Gelsolin repeat
876810746UBA/TS-N domain
151915171918103PHD-finger
2222210GGL domain
55565531HECT-domain (ubiquitin-transferase)
22112210Helix-hairpin-helix motif
1111116MSP (Major sperm protein) domain
46336628Ribonuclease III domain
22442216Region in Clathrin and VPS
13333316RanBP1 domain
22212211PPIC-type PPIASE domain
11Phosphotyrosine interaction domain (PTB/PID)
31233315Zn-finger in Ran binding protein and others
202212132120108Zinc finger C-x8-C-x5-C-x3-H type (and similar)
11114B-box zinc finger
14115517Poly(ADP-ribose) polymerase catalytic domain
13222212Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
84952123325181729F-box domain
1111116Elongation factor 1 gamma, conserved domain
23222415Calpain family cysteine protease
12222211Copper fist DNA binding domain
66786740CRAL/TRIO domain
131141526929215BTB/POZ domain
32113212Ricin-type beta-trefoil lectin domain
1112117Inhibitor of Apoptosis domain
33333318Voltage gated chloride channel
7791281558Caspase domain
84897743GDSL-like Lipase/Acylhydrolase
1111116Poly-adenylate binding protein, unique domain
1111116POLO box duplicated region
192023262225135ABC transporter transmembrane region
325Integrase core domain
44446527FAD binding domain
1111116Condensation domain
1111116S-adenosyl-L-homocysteine hydrolase, NAD binding domain
1111127HAMP domain
22222212ribosomal L5P family C-terminus
238666655Insulinase (Peptidase family M16)
45444526Dehydrogenase E1 component
1111116Lumazine binding domain
66667738Elongation factor G C-terminus
44454425HMGL-like
34444423DnaJ central domain
23332417Starch binding domain
22332214Ribosomal protein L1p/L10e family
65435427Cation transporting ATPase, C-terminus
76446532Cation transporter/ATPase, N-terminus
1111116dUTPase
75554531Aconitase C-terminal domain
33333318Amino acid kinase family
1111116N-(5'phosphoribosyl)anthranilate (PRA) isomerase
57652631Acyl transferase domain
1111116Urease beta subunit
32222213Dihydrodipicolinate synthetase family
262310102827124haloacid dehalogenase-like hydrolase
1122129Glycosyl hydrolases family 2
121013128964Glycosyl hydrolases family 18
1111116Proliferating cell nuclear antigen, N-terminal domain
112Translation initiation factor IF-3, C-terminal domain
111115Adenylosuccinate synthetase
1111116Asparaginase, N-terminal
32333418Peptidase S24-like
1111116Inorganic pyrophosphatase
5413139549Glycosyl hydrolases family 16
13332315Glycosyl hydrolases family 15
8830411215114NADH:flavin oxidoreductase / NADH oxidase family
11112173-hydroxyacyl-CoA dehydrogenase, C-terminal domain
62752325Glycosyl hydrolase family 20, catalytic domain
44655428HhH-GPD superfamily base excision DNA repair protein
1112117AIR carboxylase
321012103018112GMC oxidoreductase
22222212Asparagine synthase
681313203090Fungal cellulose binding domain
66765636Septin
1111116EF-1 guanine nucleotide exchange domain
1112117Homoserine dehydrogenase
25367629Flavin-binding monooxygenase-like
33443320tRNA synthetases class I (E and Q), catalytic domain
1111116tRNA synthetases class I (R)
66776638XPG N-terminal domain
12878131462Metallo-beta-lactamase superfamily
11F5/8 type C domain
44544425Choline/Carnitine o-acyltransferase
1111116Putative esterase
1111116Glycosyl hydrolase family 9
1111116Ferrochelatase
22222212Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1111116Arginosuccinate synthase
1111116Electron transfer flavoprotein FAD-binding domain
33343218RNB domain
74555632Dioxygenase
34657429CNH domain
22222212Diacylglycerol kinase catalytic domain
221416181617103Dual specificity phosphatase, catalytic domain
1111116MyTH4 domain
35323319P21-Rho-binding domain
13151414131584PX domain
33442521Ras association (RalGDS/AF-6) domain
44444424UBX domain
45564529VHS domain
1111116Phosphoinositide 3-kinase C2
22222212DAHP synthetase I family
44445425Carbon-nitrogen hydrolase
222118N-acetyltransferase
1111116Prephenate dehydratase
33442420Syntaxin
55556531Pumilio-family RNA binding repeat
67677740Histone-like transcription factor (CBF/NF-Y) and archaeal histone
1111116Pterin binding enzyme
1111116ER lumen protein retaining receptor
22222212Glycoprotease family
1111116Histidinol dehydrogenase
44444323impB/mucB/samB family
11114
1111116Ribosomal L15
11342112Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
1111116Ribosomal prokaryotic L21 protein
1111116Ribosomal L28 family
1111116Ribosomal L29 protein
111115Ribosomal L39 protein
1111116Ribosomal S17
1111116Ribulose-phosphate 3 epimerase family
1111116Translationally controlled tumour protein
21792627Glycosyl hydrolase family 7
246Ring hydroxylating alpha subunit (catalytic domain)
22223213RNA pseudouridylate synthase
87877744Histone deacetylase domain
42332216POT family
21222110PWWP domain
121722211717106SET domain
53554325Isochorismatase family
21224314Permease family
1111116Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
567712643XPG I-region
111115Acetokinase family
21332213DNA photolyase
1111116Cation-independent mannose-6-phosphate receptor repeat
1111239Cytosol aminopeptidase family, catalytic domain
1113Sulfatase
11111166,7-dimethyl-8-ribityllumazine synthase
111115Ribosomal protein S16
23333317Acyl CoA binding protein
56554934Cullin family
2112118Elongation factor TS
55464630FAD binding domain
12766271270O-methyltransferase domain
23683527EamA-like transporter family
222511
779107747ThiF family
1111116Ribosomal family S4e
1111217Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
24232417Ammonium Transporter Family
33335320Sulfate permease family
1111116MATH domain
33343319Dehydratase family
12221311Transaldolase/Fructose-6-phosphate aldolase
31334317Mechanosensitive ion channel
1122118GTP cyclohydrolase II
11111163,4-dihydroxy-2-butanone 4-phosphate synthase
43444423Adaptor complexes medium subunit family
788711950Exonuclease
1111116Dipeptidyl peptidase IV (DPP IV) N-terminal region
11NB-ARC domain
810788950Glycosyl hydrolase family 3 N terminal domain
11PE family
1122118Ribosomal protein L44
112Sodium:sulfate symporter transmembrane region
1111116DNA-dependent RNA polymerase
11Peptidase S7, Flavivirus NS3 serine protease
1111116Glycosyl transferase family 4
1111116HCO3- transporter family
43442219Nucleosome assembly protein (NAP)
45434525Synaptobrevin
1111116GMP synthase C terminal domain
11LAGLIDADG endonuclease
33335522Adenosine/AMP deaminase
23333317Oxidoreductase FAD-binding domain
12441517Thioesterase domain
12222211Histidine biosynthesis protein
33333318Glycosyltransferase family 20
1111116UDP-glucose/GDP-mannose dehydrogenase family, central domain
22342114Carbamoyl-phosphate synthase small chain, CPSase domain
3115PAS fold
11223211Probable molybdopterin binding domain
44444424Sec1 family
22332214GDP dissociation inhibitor
85886843Sodium/hydrogen exchanger family
22222212RNA polymerase Rpb3/RpoA insert domain
34444322Initiation factor 2 subunit family
11PQQ enzyme repeat
22222212Electron transfer flavoprotein domain
1111116Uricase
1111116Ribosomal S3Ae family
211116Ribosomal L27 protein
1122118GTP1/OBG
24333318Gamma-glutamyltranspeptidase
11Ribosomal L40e family
1111116GrpE
32333317TatD related DNase
1122118Inhibitor of apoptosis-promoting Bax1
1211117Eukaryotic DNA topoisomerase I, catalytic core
75987238Dynamin central region
232222136-O-methylguanine DNA methyltransferase, DNA binding domain
22222111Carboxyl transferase domain
1317912151682UbiA prenyltransferase family
24553423Endoribonuclease L-PSP
145111Phosphorylase superfamily
22116Mannose-6-phosphate isomerase
777