PFAM Domains • Russula brevipes BPL707 v1.0
Annotations/GenomesAurvu1Clapy1Glocon1Lacqui1Lenvul1Rusbre1Rusdis1TotalAnnotation Description
PFAMs
8,4328,4879,26510,5907,7348,6938,30261,503
44463740423739285ATPase family associated with various cellular activities (AAA)
38424041343640271ABC transporter
4441044434ATP synthase alpha/beta family, nucleotide-binding domain
17161417151617112Elongation factor Tu GTP binding domain
1112111313111182Helix-loop-helix DNA-binding domain
6109464544Hsp20/alpha crystallin family
101591488771Hsp70 protein
987797855KH domain
11Ribulose bisphosphate carboxylase large chain, catalytic domain
1113SH2 domain
27281418271513142SH3 domain
1311111312111384Actin
33323338294125231Ankyrin repeat
677977750ADP-ribosylation factor family
44302347232122210Eukaryotic aspartyl protease
333333321Cyclic nucleotide-binding domain
211121210Cytochrome c
9581278857Double-stranded RNA binding motif
181924152363EF hand
11134Fe-4S binding domain
1113Fibronectin type III domain
12814687964Glutathione S-transferase, C-terminal domain
11111117Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
11Hemopexin
171011111181078Homeodomain
11Laminin EGF domain
222222214lactate/malate dehydrogenase, NAD binding domain
655557437Myosin head (motor domain)
1672721861771081471111,168Cytochrome P450
2171951472031601981831,303Protein kinase domain
1722129229899Pyridine nucleotide-disulphide oxidoreductase
26263837244032223Ras family
887789855Response regulator receiver domain
3011331114274RNase H
69756568716666480RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
1111116Copper/zinc superoxide dismutase (SODC)
322222215Iron/manganese superoxide dismutases, alpha-hairpin domain
163171955118255Subtilase family
26393027292521197Sugar (and other) transporter
91413179101183Thioredoxin
557856642Tubulin/FtsZ family, GTPase domain
45615von Willebrand factor type A domain
76621723622332295Zinc finger, C2H2 type
6472696857231Zinc finger, C3HC4 type (RING finger)
141496127971Zinc knuckle
222222214Protein-tyrosine phosphatase
11Zinc finger, C4 type (two domains)
116120118431045236589short chain dehydrogenase
41373418431816207Zinc-binding dehydrogenase
455665536Thiolase, N-terminal domain
292242223Beta-ketoacyl synthase, N-terminal domain
331131122Fe-2S iron-sulfur cluster binding domain
11131119Enolase, C-terminal TIM barrel domain
979877855Glutamine amidotransferase class-I
1010101310101982TCP-1/cpn60 chaperonin family
333633324Glutamine synthetase, catalytic domain
12111118Triosephosphate isomerase
12141630151821126E1-E2 ATPase
19191424221313124Core histone H2A/H2B/H3/H4
1416Copper binding proteins, plastocyanin/azurin family
686777950Alpha amylase, catalytic domain
664469439Phorbol esters/diacylglycerol binding domain (C1 domain)
334424424Bacterial transferase hexapeptide (six repeats)
334536428tRNA synthetases class I (I, L, M and V)
141210101016981Cyclin, N-terminal domain
25262233161112145Carboxylesterase family
444444428DNA polymerase family B
333732324ATP synthase subunit C
89112133248Peroxidase
274246227Beta-lactamase
645553533C-5 cytosine-specific DNA methylase
32282623262330188Calcineurin-like phosphoesterase
1312191010111287Cellulase (glycosyl hydrolase family 5)
555555535tRNA synthetases class II (D, K and N)
36374041353133253Mitochondrial carrier protein
11recA bacterial DNA recombination protein
1413121915121297Aminotransferase class I and II
664365434Phosphoribosyl transferase domain
13131414141715100Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11111117Phosphoglycerate kinase
222222214Ribosomal protein S4/S9 N-terminal domain
222222214Ribosomal protein S12/S23
11Bacterial regulatory helix-turn-helix proteins, AraC family
11111117Chaperonin 10 Kd subunit
1515121414131598C2 domain
21201092010999PH domain
64912691157bZIP transcription factor
21231814181616126Aldehyde dehydrogenase family
62704544564442363Fungal Zn(2)-Cys(6) binuclear cluster domain
27242318262118157Cytochrome b5-like Heme/Steroid binding domain
1326Oxidoreductase molybdopterin binding domain
885775444Oxidoreductase NAD-binding domain
25262025262120163SNF2 family N-terminal domain
222322316Ribosomal protein S7p/S5e
21212023211820144Ubiquitin-conjugating enzyme
555655536Isocitrate/isopropylmalate dehydrogenase
222322215Ribosomal Proteins L2, RNA binding domain
222225217Hsp90 protein
221322214Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
111115Dihydrofolate reductase
11Chitin recognition protein
11121129Cysteine-rich secretory protein family
11111117Ribosomal protein S3, C-terminal domain
4711114Cupin
3433334232-oxoacid dehydrogenases acyltransferase (catalytic domain)
223122517Catalase
11111117Disintegrin
233210UDP-glucoronosyl and UDP-glucosyl transferase
555656638Aminotransferase class-III
22222212Ribosomal protein S19
11111117DNA gyrase B
222225520Thiamine pyrophosphate enzyme, central domain
333333321Lyase
111111915Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
11121118Adenylate and Guanylate cyclase catalytic domain
11111117ATP synthase delta (OSCP) subunit
11111117Orotidine 5'-phosphate decarboxylase / HUMPS family
11111117Indole-3-glycerol phosphate synthase
222222214Aromatic amino acid lyase
11111117Pyruvate kinase, barrel domain
1010991010967Kinesin motor domain
30302930302928206DnaJ domain
15141415141415101Proteasome subunit
874765542Major intrinsic protein
11111117ATP synthase
432211Glycosyl hydrolase family 1
111111173'5'-cyclic nucleotide phosphodiesterase
11Protease inhibitor/seed storage/LTP family
12111118Profilin
112212211Ribosomal protein L22p/L17e
232223216Ribosomal protein L14p/L23e
14171618151617113Ubiquitin family
764664538Cofilin/tropomyosin-type actin-binding protein
32222241714-3-3 protein
2226Alkaline phosphatase
11121118Zinc carboxypeptidase
49493329462219247Aldo/keto reductase family
11121512125774Myb-like DNA-binding domain
654565536Forkhead domain
112412213Ribosomal protein L16p/L10e
232222215Ribosomal protein S14p/S29e
344334425FKBP-type peptidyl-prolyl cis-trans isomerase
2226
573644332Flavodoxin
11Tropomyosin
11111117Calreticulin family
2551316739Common central domain of tyrosinase
668665643Aminotransferase class-V
422122215Ribonucleotide reductase, small chain
65546363635458420DEAD/DEAH box helicase
103938391997575619Helicase conserved C-terminal domain
11121118EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
232222215Ribosomal protein L23
1111127Pyridoxal-dependent decarboxylase, C-terminal sheet domain
11111117Ribosomal protein L5
547545636Pyridoxal-dependent decarboxylase conserved domain
334335425Citrate synthase, C-terminal domain
566664437GHMP kinases N terminal domain
665664538Biotin carboxylase, N-terminal domain
11111117Tryptophan synthase alpha chain
988886653Pyridoxal-phosphate dependent enzyme
14161415161414103NUDIX domain
643444530pfkB family carbohydrate kinase
32229Glycosyl hydrolases family 28
222222214Ribosomal protein L3
212222213Ribosomal protein L11, RNA binding domain
9779771056Histidine phosphatase superfamily (branch 1)
1112117Thymidylate synthase
444544429ATP synthase alpha/beta chain, C terminal domain
554557435Calponin homology (CH) domain
553152223Glutamine amidotransferases class-II
222122213Ribosomal protein S15
3233911251Thaumatin family
141111110Fructose-1-6-bisphosphatase, N-terminal domain
11111117Ribonucleotide reductase, all-alpha domain
232222215Ribosomal protein S2
222222214SRF-type transcription factor (DNA-binding and dimerisation domain)
1010131311111482GATA zinc finger
2333682357105Amino acid permease
10979135861Prolyl oligopeptidase family
111212210Ribosomal protein L30p/L7e
101497109766Histidine phosphatase superfamily (branch 2)
11111117Respiratory-chain NADH dehydrogenase, 30 Kd subunit
464445431Aconitase family (aconitate hydratase)
636419Glycosyl hydrolase family 10
11111117Glycosyl hydrolases family 17
222122213Ribosomal protein S5, N-terminal domain
222222214Nucleoside diphosphate kinase
223223216Tetraspanin family
132212314Ribosomal protein S10p/S20e
423224421Arrestin (or S-antigen), N-terminal domain
11111117Phosphoglucose isomerase
11111117Carbohydrate phosphorylase
11121118SecY translocase
11111117Respiratory-chain NADH dehydrogenase, 49 Kd subunit
222222214Ribosomal protein L6
534744431Polyprenyl synthetase
222222214Hexokinase
107798101263Dynamin family
11111319Transcription factor TFIID (or TATA-binding protein, TBP)
334332220Rieske [2Fe-2S] domain
787787751Biotin-requiring enzyme
11111117Phosphofructokinase
222222214Ribosomal protein S17
11111117Hydroxymethylglutaryl-coenzyme A reductase
433533324FGGY family of carbohydrate kinases, N-terminal domain
7781296655Enoyl-CoA hydratase/isomerase
322222215Ribosomal protein S9/S16
222233216Transcription factor TFIIB repeat
677775645Cytidine and deoxycytidylate deaminase zinc-binding region
11111117Molybdopterin oxidoreductase
1666896657Chromo (CHRromatin Organisation MOdifier) domain
221121110Phosphatidylinositol-specific phospholipase C, Y domain
222121111Phosphatidylinositol-specific phospholipase C, X domain
1389493349D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
333433322Malic enzyme, N-terminal domain
11111166-phosphogluconate dehydrogenase, C-terminal domain
12179209151395Multicopper oxidase
109688111264WW domain
222222214Ribosomal RNA adenine dimethylase
153139128121136119111907WD domain, G-beta repeat
444938638Heavy-metal-associated domain
333532322Adenylate kinase
212222213Phosphoglucomutase/phosphomannomutase, C-terminal domain
212222213Ribosomal protein S8
122212212Ribosomal protein S11
6661068850LIM domain
156Matrixin
344344426Regulator of chromosome condensation (RCC1) repeat
222222214Ribosomal protein S13/S18
11REV protein (anti-repression trans-activator protein)
232222215chorismate binding enzyme
43233332160s Acidic ribosomal protein
444344427Prenyltransferase and squalene oxidase repeat
775676644Protein kinase C terminal domain
11111117Single-strand binding protein family
1111116S-adenosylmethionine synthetase, N-terminal domain
1010101111111073Bromodomain
981010109864Acyl-CoA dehydrogenase, C-terminal domain
13141420131415103Ubiquitin carboxyl-terminal hydrolase
1111116Ribosomal protein L36
222223316Ribonuclease T2 family
543445429HSF-type DNA-binding
232222215SRP54-type protein, GTPase domain
11111117Urease alpha-subunit, N-terminal domain
18141617139794Serine carboxypeptidase
9888810859Phosphatidylinositol 3- and 4-kinase
223222215Transketolase, thiamine diphosphate binding domain
415Glycosyl hydrolases family 11
223225218Inositol monophosphatase family
5451045538Glutaredoxin
452232220Isocitrate lyase family
11111139Serine hydroxymethyltransferase
222223316Iron-containing alcohol dehydrogenase
322221214Ribosomal protein L10
445756536KOW motif
11111117Ribosomal protein L34
11114Ribosomal protein L33
233333320RF-1 domain
231132113Sodium:solute symporter family
11111117Imidazoleglycerol-phosphate dehydratase
21111118DNA polymerase family A
11111117IMP dehydrogenase / GMP reductase domain
11111117Glucose-6-phosphate dehydrogenase, NAD binding domain
897897755Protein phosphatase 2C
343233321Nucleotidyl transferase
334251220Carbonic anhydrase
11111117Phosphoribulokinase / Uridine kinase family
1312105147768Fatty acid desaturase
666768645MutS domain V
11111117Delta-aminolevulinic acid dehydratase
343333322Arginase family
6666713650MCM P-loop domain
112212211Squalene/phytoene synthase
91411101191175FHA domain
31261823231515151AMP-binding enzyme
1715121113141799G-protein alpha subunit
19161317231415117HMG (high mobility group) box
553355329His Kinase A (phospho-acceptor) domain
342232218Armadillo/beta-catenin-like repeat
46481530391514207Tetratricopeptide repeat
443636329Ion transport protein
111114211DNA gyrase/topoisomerase IV, subunit A
9114696752BRCA1 C Terminus (BRCT) domain
665665539Glycosyl transferases group 1
643342224Glycosyl transferase family 2
211116SAM domain (Sterile alpha motif)
543243324linker histone H1 and H5 family
11121118Ribosomal protein L7/L12 C-terminal domain
11111117Urease, gamma subunit
333333321CoA-ligase
573343328Phosphopantetheine attachment site
222222315Formyl transferase
111011131191075Metallopeptidase family M24
151421181152Leucine Rich Repeat
29349133345127alpha/beta hydrolase fold
333333321RNA polymerase Rpb2, domain 6
545745535PB1 domain
222322215Staphylococcal nuclease homologue
99121210131277Rab-GTPase-TBC domain
11121118Tudor domain
1213119WH1 domain
443544327Zinc finger, ZZ type
11111117HRDC domain
996786752CBS domain
222222214Ribosomal protein L13
222222214Ribosomal protein L4/L1 family
11111117Clp protease
434455328S1 RNA binding domain
11111117HIUase/Transthyretin family
344434426AhpC/TSA family
445644431tRNA synthetases class I (W and Y)
122117UvrD/REP helicase N-terminal domain
449949847Rhodanese-like domain
222222214Universal stress protein family
3440251438916176Acetyltransferase (GNAT) family
11111117SecE/Sec61-gamma subunits of protein translocation complex
11121118C-terminal regulatory domain of Threonine dehydratase
222222214AIR synthase related protein, N-terminal domain
865663539tRNA synthetase class II core domain (G, H, P, S and T)
222221213Tetrapyrrole (Corrin/Porphyrin) Methylases
11111117Glycosyl transferase family, a/b domain
11111117Class II Aldolase and Adducin N-terminal domain
335435427Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
4542966458Fes/CIP4, and EFC/F-BAR homology domain
442232219IQ calmodulin-binding motif
222224216Phosphoinositide 3-kinase family, accessory domain (PIK domain)
43251217Phospholipase D Active site motif
113214214Regulator of G protein signaling domain
444443427GTPase-activator protein for Ras-like GTPase
8899815966RasGEF domain
9888812760RasGEF N-terminal motif
15131346141414129RhoGAP domain
14131619131313101RhoGEF domain
444343426SPRY domain
333343322RNA polymerase Rpb1, domain 2
1111116Guanylate kinase
544352225Gelsolin repeat
986696549UBA/TS-N domain
14151516171615108PHD-finger
1213119GGL domain
575658945HECT-domain (ubiquitin-transferase)
311111210Helix-hairpin-helix motif
11111117MSP (Major sperm protein) domain
9735103441Ribonuclease III domain
228424426Region in Clathrin and VPS
333333220RanBP1 domain
222122213PPIC-type PPIASE domain
322343219Zn-finger in Ran binding protein and others
27281213291110130Zinc finger C-x8-C-x5-C-x3-H type (and similar)
13116B-box zinc finger
341152521Poly(ADP-ribose) polymerase catalytic domain
222212213Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
27925437261813630843F-box domain
1111110116Elongation factor 1 gamma, conserved domain
1111116Calpain family cysteine protease
222322215Copper fist DNA binding domain
777877750CRAL/TRIO domain
51344782345245345BTB/POZ domain
134Ricin-type beta-trefoil lectin domain
11111117Inhibitor of Apoptosis domain
333433322Voltage gated chloride channel
1112826192114111Caspase domain
76451124GDSL-like Lipase/Acylhydrolase
112211210Poly-adenylate binding protein, unique domain
211411111POLO box duplicated region
17232112131612114ABC transporter transmembrane region
333334322FAD binding domain
1113Condensation domain
11111117S-adenosyl-L-homocysteine hydrolase, NAD binding domain
331122113HAMP domain
222222113ribosomal L5P family C-terminus
555755537Insulinase (Peptidase family M16)
444455430Dehydrogenase E1 component
11111117Lumazine binding domain
876667747Elongation factor G C-terminus
444447431HMGL-like
444444428DnaJ central domain
362444326Starch binding domain
223323318Ribosomal protein L1p/L10e family
5561175847Cation transporting ATPase, C-terminus
7871196856Cation transporter/ATPase, N-terminus
11112118dUTPase
454444429Aconitase C-terminal domain
333333321Amino acid kinase family
11111117N-(5'phosphoribosyl)anthranilate (PRA) isomerase
292242324Acyl transferase domain
11111117Urease beta subunit
222222214Dihydrodipicolinate synthetase family
27331323281817159haloacid dehalogenase-like hydrolase
222121111Glycosyl hydrolases family 2
1276898757Glycosyl hydrolases family 18
11111117Proliferating cell nuclear antigen, N-terminal domain
11114Translation initiation factor IF-3, C-terminal domain
11111117Adenylosuccinate synthetase
11111117Asparaginase, N-terminal
323223318Peptidase S24-like
11111117Inorganic pyrophosphatase
441094131054Glycosyl hydrolases family 16
1014911107465Glycosyl hydrolases family 15
202453219177124NADH:flavin oxidoreductase / NADH oxidase family
111111173-hydroxyacyl-CoA dehydrogenase, C-terminal domain
222231113Glycosyl hydrolase family 20, catalytic domain
665565639HhH-GPD superfamily base excision DNA repair protein
11111218AIR carboxylase
48472236351113212GMC oxidoreductase
322222215Asparagine synthase
23232520192Fungal cellulose binding domain
666666642Septin
11111117EF-1 guanine nucleotide exchange domain
11111117Homoserine dehydrogenase
434452123Flavin-binding monooxygenase-like
343333221tRNA synthetases class I (E and Q), catalytic domain
111111612tRNA synthetases class I (R)
465556536XPG N-terminal domain
11987105656Metallo-beta-lactamase superfamily
546743433Choline/Carnitine o-acyltransferase
11111117Putative esterase
11111117Glycosyl hydrolase family 9
11121118Ferrochelatase
222221213Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
11111117Arginosuccinate synthase
11111117Electron transfer flavoprotein FAD-binding domain
333333321RNB domain
111211310Dioxygenase
344103111045CNH domain
322222417Diacylglycerol kinase catalytic domain
15191413161513105Dual specificity phosphatase, catalytic domain
11111117MyTH4 domain
323238425P21-Rho-binding domain
111212913121382PX domain
323222216Ras association (RalGDS/AF-6) domain
443444427UBX domain
555556637VHS domain
11111218Phosphoinositide 3-kinase C2
222321214DAHP synthetase I family
443473328Carbon-nitrogen hydrolase
112Geminivirus Rep catalytic domain
11111117Prephenate dehydratase
454444429Syntaxin
565454534Pumilio-family RNA binding repeat
778678750Histone-like transcription factor (CBF/NF-Y) and archaeal histone
11111117Pterin binding enzyme
11111117ER lumen protein retaining receptor
223222215Glycoprotease family
11111117Histidinol dehydrogenase
334333322impB/mucB/samB family
1124
11111117Ribosomal L15
113413316Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
11111117Ribosomal prokaryotic L21 protein
11111117Ribosomal L28 family
11111117Ribosomal L29 protein
11111117Ribosomal L39 protein
11111117Ribosomal S17
11111117Ribulose-phosphate 3 epimerase family
11111117Translationally controlled tumour protein
523313Glycosyl hydrolase family 7
222222214RNA pseudouridylate synthase
877877751Histone deacetylase domain
11111218POT family
122212212PWWP domain
25231735171517149SET domain
234131115Isochorismatase family
222322114Permease family
11111117Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
6761075546XPG I-region
2111128Acetokinase family
221121110DNA photolyase
1113Cation-independent mannose-6-phosphate receptor repeat
11211118Cytosol aminopeptidase family, catalytic domain
123Sulfatase
111111176,7-dimethyl-8-ribityllumazine synthase
11111117Ribosomal protein S16
233133318Acyl CoA binding protein
555667438Cullin family
11241110Elongation factor TS
553352225FAD binding domain
1724168151687O-methyltransferase domain
4431744541EamA-like transporter family
2226
7711978857ThiF family
11111218Ribosomal family S4e
21111118Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
222121111Ammonium Transporter Family
333532322Sulfate permease family
11111117MATH domain
222222214Dehydratase family
123221213Transaldolase/Fructose-6-phosphate aldolase
333131115Mec