PFAM Domains • Urocystis primulicola RUB 030670 v1.0
Annotations/GenomesCersp1Exomac1Malgl1Melen1Spore1Tilalb1Uropr1Ustma2_2Ustsp1TotalAnnotation Description
PFAMs
5,6899,3204,0576,6795,9007,5196,5607,1946,00458,922
1111157 transmembrane receptor (rhodopsin family)
314630292932292929284ATPase family associated with various cellular activities (AAA)
324123263434233933285ABC transporter
45444444437ATP synthase alpha/beta family, nucleotide-binding domain
131814141415161514133Elongation factor Tu GTP binding domain
111277121110111192Helix-loop-helix DNA-binding domain
11111117Hsp20/alpha crystallin family
79877787969Hsp70 protein
810778878871KH domain
1113SH2 domain
241715152316161622164SH3 domain
1010910101010101089Actin
172131161221569Ankyrin repeat
325PAN domain
69798888871ADP-ribosylation factor family
111417258139910116Eukaryotic aspartyl protease
33233333326Cyclic nucleotide-binding domain
11Cytochrome b(C-terminal)/b6/petD
11Cytochrome b/b6/petB
1111111119Cytochrome c
24223221119Double-stranded RNA binding motif
151131161211868EF hand
1221174Fe-4S binding domain
11114Fibronectin type III domain
11Globin
810226544748Glutathione S-transferase, C-terminal domain
11111112110Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
67156455443Homeodomain
23222222219lactate/malate dehydrogenase, NAD binding domain
58644554546Myosin head (motor domain)
22276191526162022173Cytochrome P450
961268210392101979599891Protein kinase domain
13177101411101513110Pyridine nucleotide-disulphide oxidoreductase
223614242426252523219Ras family
10184121112121112102Response regulator receiver domain
36145113125RNase H
566141536152505458486RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
11Retroviral aspartyl protease
347Reverse transcriptase (RNA-dependent DNA polymerase)
22222222218Iron/manganese superoxide dismutases, alpha-hairpin domain
6113214645565Subtilase family
20388182739232426223Sugar (and other) transporter
912711101010101089Thioredoxin
11Trypsin
45444444437Tubulin/FtsZ family, GTPase domain
12126von Willebrand factor type A domain
291815103010151030167Zinc finger, C2H2 type
3142173955739158Zinc finger, C3HC4 type (RING finger)
1075814887875Zinc knuckle
22222212217Protein-tyrosine phosphatase
507912254553263946375short chain dehydrogenase
283317142531122125206Zinc-binding dehydrogenase
66366766551Thiolase, N-terminal domain
611535351140Beta-ketoacyl synthase, N-terminal domain
424241224252Fe-2S iron-sulfur cluster binding domain
11211111110Enolase, C-terminal TIM barrel domain
11Cytochrome C and Quinol oxidase polypeptide I
7126779107873Glutamine amidotransferase class-I
91491191010101092TCP-1/cpn60 chaperonin family
12122222115Glutamine synthetase, catalytic domain
24222122320Triosephosphate isomerase
12219181418141814138E1-E2 ATPase
89877977971Core histone H2A/H2B/H3/H4
11Copper binding proteins, plastocyanin/azurin family
4324324426Alpha amylase, catalytic domain
42155445535Phorbol esters/diacylglycerol binding domain (C1 domain)
66455546445Bacterial transferase hexapeptide (six repeats)
35343444333tRNA synthetases class I (I, L, M and V)
612610910910880Cyclin, N-terminal domain
129159848965Carboxylesterase family
45444444437DNA polymerase family B
22222222218ATP synthase subunit C
22223223523Peroxidase
1411212214Beta-lactamase
254222320C-5 cytosine-specific DNA methylase
202916172222162021183Calcineurin-like phosphoesterase
1113495121111682Cellulase (glycosyl hydrolase family 5)
68666666757tRNA synthetases class II (D, K and N)
354730323636343735322Mitochondrial carrier protein
132210141314141415129Aminotransferase class I and II
74647444747Phosphoribosyl transferase domain
912810101111111193Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111111119Phosphoglycerate kinase
24222222220Ribosomal protein S4/S9 N-terminal domain
22222212217Ribosomal protein S12/S23
1111111119Chaperonin 10 Kd subunit
11147101214891196C2 domain
181413131711131221132PH domain
684137111011777bZIP transcription factor
820691417131816121Aldehyde dehydrogenase family
63945598741587586568Fungal Zn(2)-Cys(6) binuclear cluster domain
172410151720161819156Cytochrome b5-like Heme/Steroid binding domain
25242116Oxidoreductase molybdopterin binding domain
79657858762Oxidoreductase NAD-binding domain
192515211921191721177SNF2 family N-terminal domain
24222222220Ribosomal protein S7p/S5e
182511171820191816162Ubiquitin-conjugating enzyme
58558668758Isocitrate/isopropylmalate dehydrogenase
21222222217Ribosomal Proteins L2, RNA binding domain
1111111119Hsp90 protein
23222222219Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111111119Dihydrofolate reductase
112Chitin recognition protein
1332222217Cysteine-rich secretory protein family
1111111119Ribosomal protein S3, C-terminal domain
11114Cupin
111111118Annexin
332334333272-oxoacid dehydrogenases acyltransferase (catalytic domain)
352242220Catalase
111111118Disintegrin
14117UDP-glucoronosyl and UDP-glucosyl transferase
58455655750Aminotransferase class-III
23212212217Ribosomal protein S19
1111111119DNA gyrase B
34522222224Thiamine pyrophosphate enzyme, central domain
34333334329Lyase
23122222319Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1111111119Adenylate and Guanylate cyclase catalytic domain
12121111111ATP synthase delta (OSCP) subunit
1111111119Orotidine 5'-phosphate decarboxylase / HUMPS family
1111111119Indole-3-glycerol phosphate synthase
2111212212Aromatic amino acid lyase
1111111119Pyruvate kinase, barrel domain
119991010910986Kinesin motor domain
263220282727282728243DnaJ domain
141614161414141414130Proteasome subunit
612165855654Major intrinsic protein
1111111119ATP synthase
214119Glycosyl hydrolase family 1
1123'5'-cyclic nucleotide phosphodiesterase
12111111110Profilin
22222222218Ribosomal protein L22p/L17e
24222222220Ribosomal protein L14p/L23e
131181210119121096Ubiquitin family
34344444535Cofilin/tropomyosin-type actin-binding protein
1211111111014-3-3 protein
41114222421Alkaline phosphatase
11111117Zinc carboxypeptidase
162710121525121515147Aldo/keto reductase family
1388696671376Myb-like DNA-binding domain
38354545441Forkhead domain
2322112316Glycosyl hydrolases family 32 N-terminal domain
12121222114Ribosomal protein L16p/L10e
23122222218Ribosomal protein S14p/S29e
33333333327FKBP-type peptidyl-prolyl cis-trans isomerase
1111111119Glutathione peroxidase
22217
44344333533Flavodoxin
12111111110Calreticulin family
1112218Common central domain of tyrosinase
47367578653Aminotransferase class-V
12111111110Ribonucleotide reductase, small chain
415636464040434838388DEAD/DEAH box helicase
678560696966616569611Helicase conserved C-terminal domain
22Fructose-bisphosphate aldolase class-I
21111111110EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
12121222114Ribosomal protein L23
1111111119Pyridoxal-dependent decarboxylase, C-terminal sheet domain
1111111119Ribosomal protein L5
55344545540Pyridoxal-dependent decarboxylase conserved domain
22151432222Citrate synthase, C-terminal domain
56565555547GHMP kinases N terminal domain
512467957762Biotin carboxylase, N-terminal domain
1111111119Tryptophan synthase alpha chain
89589118101179Pyridoxal-phosphate dependent enzyme
12177101212111212105NUDIX domain
34433434331pfkB family carbohydrate kinase
1112311313Glycosyl hydrolases family 28
11114Luciferase-like monooxygenase
23222222219Ribosomal protein L3
12222222217Ribosomal protein L11, RNA binding domain
91061110109101085Histidine phosphatase superfamily (branch 1)
1111111119Thymidylate synthase
45444444437ATP synthase alpha/beta chain, C terminal domain
54235435435Calponin homology (CH) domain
54435333535Glutamine amidotransferases class-II
22222222218Ribosomal protein S15
113117Thaumatin family
1111111119Fructose-1-6-bisphosphatase, N-terminal domain
1111111119Ribonucleotide reductase, all-alpha domain
22222222218Ribosomal protein S2
22222222218SRF-type transcription factor (DNA-binding and dimerisation domain)
91381010119101090GATA zinc finger
12108619771021100Amino acid permease
58263844444Prolyl oligopeptidase family
12122222115Ribosomal protein L30p/L7e
8116681059972Histidine phosphatase superfamily (branch 2)
1111111119Respiratory-chain NADH dehydrogenase, 30 Kd subunit
47544444440Aconitase family (aconitate hydratase)
23212111Glycosyl hydrolase family 10
1222212113Glycosyl hydrolases family 17
23222222219Ribosomal protein S5, N-terminal domain
22223433324Nucleoside diphosphate kinase
121217Tetraspanin family
12121222215Ribosomal protein S10p/S20e
5121231116Arrestin (or S-antigen), N-terminal domain
11111111210Phosphoglucose isomerase
12121111111SecY translocase
1111111119Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222222218Ribosomal protein L6
34333333328Polyprenyl synthetase
22122222217Hexokinase
36363544337Dynamin family
1111111119Transcription factor TFIID (or TATA-binding protein, TBP)
35224323327Rieske [2Fe-2S] domain
111115Phytochrome region
11Proton-conducting membrane transporter
7144891179877Biotin-requiring enzyme
1111111119Phosphofructokinase
11222222216Ribosomal protein S17
1111111119Hydroxymethylglutaryl-coenzyme A reductase
2422322320FGGY family of carbohydrate kinases, N-terminal domain
101758121210121298Enoyl-CoA hydratase/isomerase
22222222218Ribosomal protein S9/S16
23222222219Transcription factor TFIIB repeat
67577776961Cytidine and deoxycytidylate deaminase zinc-binding region
11111211110Molybdopterin oxidoreductase
75357562444Chromo (CHRromatin Organisation MOdifier) domain
22112222216Phosphatidylinositol-specific phospholipase C, Y domain
23112333220Phosphatidylinositol-specific phospholipase C, X domain
44356646543D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
13111211112Malic enzyme, N-terminal domain
11111111196-phosphogluconate dehydrogenase, C-terminal domain
42646846848Multicopper oxidase
1010378767866WW domain
22222222218Ribosomal RNA adenine dimethylase
971239110410310510499104930WD domain, G-beta repeat
28133223327Heavy-metal-associated domain
34333333328Adenylate kinase
24231333122Phosphoglucomutase/phosphomannomutase, C-terminal domain
13222222218Ribosomal protein S8
12222222217Ribosomal protein S11
69466565653LIM domain
23132433324Regulator of chromosome condensation (RCC1) repeat
24222222220Ribosomal protein S13/S18
22222222218chorismate binding enzyme
3333333332760s Acidic ribosomal protein
44324424431Prenyltransferase and squalene oxidase repeat
67336444643Protein kinase C terminal domain
1111111119Single-strand binding protein family
11Type II/IV secretion system protein
1111111119S-adenosylmethionine synthetase, N-terminal domain
914101210111111997Bromodomain
9144911139111090Acyl-CoA dehydrogenase, C-terminal domain
121912131314131313122Ubiquitin carboxyl-terminal hydrolase
12111111110Ribosomal protein L36
11122222114Ribonuclease T2 family
65255654644HSF-type DNA-binding
22222222218SRP54-type protein, GTPase domain
1111111119Urease alpha-subunit, N-terminal domain
610586756659Serine carboxypeptidase
812788887874Phosphatidylinositol 3- and 4-kinase
22111211112Transketolase, thiamine diphosphate binding domain
112Glycosyl hydrolases family 11
2111117WHEP-TRS domain
33222322322Inositol monophosphatase family
49344434439Glutaredoxin
23323222221Isocitrate lyase family
1111111119Serine hydroxymethyltransferase
2412222217Iron-containing alcohol dehydrogenase
12233233221Ribosomal protein L10
4625454333KOW motif
111111118Ribosomal protein L34
1111116Ribosomal protein L33
23232223221RF-1 domain
4414644431Sodium:solute symporter family
1111111119Imidazoleglycerol-phosphate dehydratase
1111111119DNA polymerase family A
21111111110IMP dehydrogenase / GMP reductase domain
1111111119Glucose-6-phosphate dehydrogenase, NAD binding domain
56555555546Protein phosphatase 2C
14122122217Nucleotidyl transferase
33111221115Carbonic anhydrase
12111122112Phosphoribulokinase / Uridine kinase family
54354444437Fatty acid desaturase
68466656653MutS domain V
13111111111Delta-aminolevulinic acid dehydratase
14111522320Arginase family
69766666658MCM P-loop domain
23122333221Squalene/phytoene synthase
412366766757FHA domain
273412212527203027223AMP-binding enzyme
46144444435G-protein alpha subunit
78388998969HMG (high mobility group) box
612266875759His Kinase A (phospho-acceptor) domain
32232434326Armadillo/beta-catenin-like repeat
2118208231013818139Tetratricopeptide repeat
21223232320Ion transport protein
1111111119DNA gyrase/topoisomerase IV, subunit A
67755643750BRCA1 C Terminus (BRCT) domain
47344444539Glycosyl transferases group 1
33223222423Glycosyl transferase family 2
1113SAM domain (Sterile alpha motif)
1321121314linker histone H1 and H5 family
1111111119Ribosomal protein L7/L12 C-terminal domain
11125Pectate lyase
22111211213ribonuclease
1111111119Urease, gamma subunit
56245545541CoA-ligase
121159897121285Phosphopantetheine attachment site
43244544434Formyl transferase
510776887664Metallopeptidase family M24
131133153441773Leucine Rich Repeat
2461372352418102alpha/beta hydrolase fold
34333343329RNA polymerase Rpb2, domain 6
36122332224PB1 domain
22122222217Staphylococcal nuclease homologue
91871381313139103Rab-GTPase-TBC domain
111111118Tudor domain
1111111119WH1 domain
56132432329Zinc finger, ZZ type
21121111212HRDC domain
65678765858CBS domain
22222222218Ribosomal protein L13
22222222218Ribosomal protein L4/L1 family
45434434233S1 RNA binding domain
21111118HIUase/Transthyretin family
34233333327AhpC/TSA family
44444434435tRNA synthetases class I (W and Y)
1312112213UvrD/REP helicase N-terminal domain
29363866548Rhodanese-like domain
32233433326Universal stress protein family
17279131814121515140Acetyltransferase (GNAT) family
1111111119SecE/Sec61-gamma subunits of protein translocation complex
1111111119C-terminal regulatory domain of Threonine dehydratase
23222222219AIR synthase related protein, N-terminal domain
98979777972tRNA synthetase class II core domain (G, H, P, S and T)
22122222217Tetrapyrrole (Corrin/Porphyrin) Methylases
12121111111Glycosyl transferase family, a/b domain
2422312117Class II Aldolase and Adducin N-terminal domain
46132332327Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
34144444331Fes/CIP4, and EFC/F-BAR homology domain
53423323227IQ calmodulin-binding motif
23222222219Phosphoinositide 3-kinase family, accessory domain (PIK domain)
32223221421Phospholipase D Active site motif
1541343122Regulator of G protein signaling domain
45244444435GTPase-activator protein for Ras-like GTPase
55355555543RasGEF domain
54445445540RasGEF N-terminal motif
1010911111010101293RhoGAP domain
121810141214121213117RhoGEF domain
21222121215SPRY domain
33333333327RNA polymerase Rpb1, domain 2
12111111211Guanylate kinase
33323322425Gelsolin repeat
75659656554UBA/TS-N domain
161312111611121213116PHD-finger
111111118GGL domain
49555555548HECT-domain (ubiquitin-transferase)
42112111215Helix-hairpin-helix motif
112BRCA2 repeat
1111111119MSP (Major sperm protein) domain
34124322324Ribonuclease III domain
25152344228Region in Clathrin and VPS
26333323328RanBP1 domain
111111118PPIC-type PPIASE domain
221142113Zn-finger in Ran binding protein and others
151010617891016101Zinc finger C-x8-C-x5-C-x3-H type (and similar)
11Poly(ADP-ribose) polymerase catalytic domain
11111117Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
233673216120117F-box domain
11111121110Elongation factor 1 gamma, conserved domain
13111111111Calpain family cysteine protease
1111111119Copper fist DNA binding domain
1017688788880CRAL/TRIO domain
3645775744BTB/POZ domain
1111111119Inhibitor of Apoptosis domain
12122222216Voltage gated chloride channel
1111111119Caspase domain
3148GDSL-like Lipase/Acylhydrolase
22111122214Poly-adenylate binding protein, unique domain
1111111119POLO box duplicated region
162214111615122017143ABC transporter transmembrane region
134Integrase core domain
35343333431FAD binding domain
34243113526Condensation domain
12111111110S-adenosyl-L-homocysteine hydrolase, NAD binding domain
1111111119HAMP domain
13121221215ribosomal L5P family C-terminus
56555555546Insulinase (Peptidase family M16)
35243433330Dehydrogenase E1 component
12111111110Lumazine binding domain
67556666653Elongation factor G C-terminus
47344444438HMGL-like
44444444436DnaJ central domain
24232333224Ribosomal protein L1p/L10e family
66477857757Cation transporting ATPase, C-terminus
77410109711974Cation transporter/ATPase, N-terminus
111111118dUTPase
46444444438Aconitase C-terminal domain
43233333327Amino acid kinase family
1111111119N-(5'phosphoribosyl)anthranilate (PRA) isomerase
62243435736Acyl transferase domain
1111111119Urease beta subunit
2111139Dihydrodipicolinate synthetase family
221615132714111325156haloacid dehalogenase-like hydrolase
111115Glycosyl hydrolases family 2
34132233324Glycosyl hydrolases family 18
1111111119Proliferating cell nuclear antigen, N-terminal domain
11114Translation initiation factor IF-3, C-terminal domain
112Acylphosphatase
13111111111Adenylosuccinate synthetase
2111211110Asparaginase, N-terminal
2313223218Peptidase S24-like
1111111119Inorganic pyrophosphatase
491466412450Glycosyl hydrolases family 16
1111211210Glycosyl hydrolases family 15
36333833537NADH:flavin oxidoreductase / NADH oxidase family
241222222193-hydroxyacyl-CoA dehydrogenase, C-terminal domain
2122312215Glycosyl hydrolase family 20, catalytic domain
58356645648HhH-GPD superfamily base excision DNA repair protein
13111111111AIR carboxylase
1215689149101194GMC oxidoreductase
23222422221Asparagine synthase
4544