PFAM Domains • Penicillium chrysogenum v1.0
Annotations/GenomesAscru1Canar1Canca1Cante1Dekbr1Hanpo2Lipst1_1Nadfu1Pacta1_2Pench1Picme2Picst3Sacce1Spapa3Wican1TotalAnnotation Description
PFAMs
5,3295,1224,4745,0504,7905,0066,3675,3245,2229,1404,8884,5715,5355,2595,80781,884
313330343232353734403228333333497ATPase family associated with various cellular activities (AAA)
302825242322562628543031313136475ABC transporter
44444444444444460ATP synthase alpha/beta family, nucleotide-binding domain
112EGF-like domain
171412131414141415141414161414213Elongation factor Tu GTP binding domain
13107898989101077810133Helix-loop-helix DNA-binding domain
4121244252229Hsp20/alpha crystallin family
10979997109791214910140Hsp70 protein
885778999888888118KH domain
11Ribulose bisphosphate carboxylase large chain, catalytic domain
111111111111113SH2 domain
221816191717212120231822221921296SH3 domain
1010891110101110109891011146Actin
121510131412161514591314181616257Ankyrin repeat
11PAN domain
767666778857776100ADP-ribosylation factor family
119484586988971412122Eukaryotic aspartyl protease
23434344344433351Cyclic nucleotide-binding domain
112Cytochrome b/b6/petB
21112112111121119Cytochrome c
53111232222123535Double-stranded RNA binding motif
20111491114151512161013111111193EF hand
11112111111111154Fe-4S binding domain
1121221212Fibronectin type III domain
7213122332228240Globin
952686745148266896Glutathione S-transferase, C-terminal domain
21122112211431226Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
11Hemopexin
53233566574385469Homeodomain
43233322343333344lactate/malate dehydrogenase, NAD binding domain
3232355342353144Myosin head (motor domain)
46511452145104510395201Cytochrome P450
10210179899597869896145969511493971,483Protein kinase domain
775751010971578959120Pyridine nucleotide-disulphide oxidoreductase
352119201822232424231923242021336Ras family
4646357971756489100Response regulator receiver domain
141221151111122RNase H
515240405152625849654647484659766RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
11Retroviral aspartyl protease
1124Reverse transcriptase (RNA-dependent DNA polymerase)
23132211232313231Copper/zinc superoxide dismutase (SODC)
11111111121212219Iron/manganese superoxide dismutases, alpha-hairpin domain
1046444555544412581Subtilase family
8301039303210314251121460342539575Sugar (and other) transporter
987898897117910810128Thioredoxin
3111211111215Trypsin
43533354543343355Tubulin/FtsZ family, GTPase domain
1146von Willebrand factor type A domain
374130383034414133753349383339592Zinc finger, C2H2 type
302630282926343131393024223337450Zinc finger, C3HC4 type (RING finger)
48324293483567472Zinc knuckle
62242222322234341Protein-tyrosine phosphatase
1617204214258020261171731133340511short chain dehydrogenase
211623171519401519791624171829368Zinc-binding dehydrogenase
33322253362424549Thiolase, N-terminal domain
222222522252222256Beta-ketoacyl synthase, N-terminal domain
333333333533233462Fe-2S iron-sulfur cluster binding domain
21111111311151223Enolase, C-terminal TIM barrel domain
213Cytochrome C and Quinol oxidase polypeptide I
112Cytochrome C oxidase subunit II, periplasmic domain
8777778881187987117Glutamine amidotransferase class-I
111091091091010101010101011149TCP-1/cpn60 chaperonin family
11ATP synthase A chain
11211112131111119Glutamine synthetase, catalytic domain
11111131121111118Triosephosphate isomerase
129810981711720911121013166E1-E2 ATPase
14105111097131171011101110149Core histone H2A/H2B/H3/H4
1113621941161683476Alpha amylase, catalytic domain
21211121123111121Phorbol esters/diacylglycerol binding domain (C1 domain)
554546663115548784Bacterial transferase hexapeptide (six repeats)
43433434433733354tRNA synthetases class I (I, L, M and V)
1110610810710117711131211144Cyclin, N-terminal domain
11173212440Carboxylesterase family
44444444444444460DNA polymerase family B
33333343453333349ATP synthase subunit C
22112222232212127Peroxidase
113112121123Beta-lactamase
22C-5 cytosine-specific DNA methylase
112NADH dehydrogenase
192115191821291818312018211821307Calcineurin-like phosphoesterase
321511332111443347Cellulase (glycosyl hydrolase family 5)
66666666675666690tRNA synthetases class II (D, K and N)
343233333131353833423034343335508Mitochondrial carrier protein
11recA bacterial DNA recombination protein
151311151211111112251010111314194Aminotransferase class I and II
1086888810109881188128Phosphoribosyl transferase domain
68461089121111688811126Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11111111111111115Phosphoglycerate kinase
22122223212232230Ribosomal protein S4/S9 N-terminal domain
22222223222232232Ribosomal protein S12/S23
122218Bacterial regulatory helix-turn-helix proteins, AraC family
12111212111111118Chaperonin 10 Kd subunit
109610611899116911911135C2 domain
121314131113141517151215241218218PH domain
66362678795585487bZIP transcription factor
101010101011119103710109915181Aldehyde dehydrogenase family
617043865773125395930980855359931,292Fungal Zn(2)-Cys(6) binuclear cluster domain
17131216151419131627121471313221Cytochrome b5-like Heme/Steroid binding domain
121217Oxidoreductase molybdopterin binding domain
5776898781987879123Oxidoreductase NAD-binding domain
191817181916191818251918171719277SNF2 family N-terminal domain
22223223222222232Ribosomal protein S7p/S5e
131415131414211515201413141316224Ubiquitin-conjugating enzyme
96566666686676695Isocitrate/isopropylmalate dehydrogenase
23232223223333237Ribosomal Proteins L2, RNA binding domain
11111112111121117Hsp90 protein
22222222222222230Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111111111111115Dihydrofolate reductase
12115Chitin recognition protein
4244223222339345Cysteine-rich secretory protein family
11111111111111115Ribosomal protein S3, C-terminal domain
123Cupin
1124Annexin
11Chalcone and stilbene synthases, N-terminal domain
112Trypsin and protease inhibitor
223222232322222332-oxoacid dehydrogenases acyltransferase (catalytic domain)
11221162281121233Catalase
1113Disintegrin
1113UDP-glucoronosyl and UDP-glucosyl transferase
610375848499745897Aminotransferase class-III
22222123222222230Ribosomal protein S19
11111111111111115DNA gyrase B
26534554494373468Thiamine pyrophosphate enzyme, central domain
44333333433434350Lyase
22222222222232231Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
11Sodium:neurotransmitter symporter family
11Ferritin-like domain
21211112111111118Adenylate and Guanylate cyclase catalytic domain
11111112111111116ATP synthase delta (OSCP) subunit
11111111111111115Orotidine 5'-phosphate decarboxylase / HUMPS family
11111111111111115Indole-3-glycerol phosphate synthase
11Neurohypophysial hormones, N-terminal Domain
11Aromatic amino acid lyase
21111112111121118Pyruvate kinase, barrel domain
79864861081146668107Kinesin motor domain
242421212123242524272324212325350DnaJ domain
141414141413141414141414141414209Proteasome subunit
21111121361141228Major intrinsic protein
11111111111111115ATP synthase
33Glycosyl hydrolase family 1
111111111111111153'5'-cyclic nucleotide phosphodiesterase
1111111121111115Profilin
21121212111121120Ribosomal protein L22p/L17e
22122222222232230Ribosomal protein L14p/L23e
96875711117976978117Ubiquitin family
43244442474334557Cofilin/tropomyosin-type actin-binding protein
1121112212112112014-3-3 protein
11222231141211327Alkaline phosphatase
1111111121111115Zinc carboxypeptidase
1015617131641813341717161824265Aldo/keto reductase family
151311101414131414161312151214200Myb-like DNA-binding domain
23333233243344446Forkhead domain
1861218Glycosyl hydrolases family 32 N-terminal domain
111111111111113Ribosomal protein L16p/L10e
22222223222132231Ribosomal protein S14p/S29e
53322333343343347FKBP-type peptidyl-prolyl cis-trans isomerase
41121112211232226Glutathione peroxidase
11211121121121220
8668771078688767109Flavodoxin
11111112111111116Calreticulin family
55Common central domain of tyrosinase
45654564485334672Aminotransferase class-V
11111111111121116Ribonucleotide reductase, small chain
353330273131363632393337563134521DEAD/DEAH box helicase
585653495559705956705856795959896Helicase conserved C-terminal domain
11111111111111115EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22222222222222230Ribosomal protein L23
11111111121111116Pyridoxal-dependent decarboxylase, C-terminal sheet domain
12112112212131223Ribosomal protein L5
43333363373323352Pyridoxal-dependent decarboxylase conserved domain
21211133131131226Citrate synthase, C-terminal domain
54554375554465572GHMP kinases N terminal domain
55766565686575688Biotin carboxylase, N-terminal domain
11111111121111116Tryptophan synthase alpha chain
85785688617787811119Pyridoxal-phosphate dependent enzyme
77987691082078787128NUDIX domain
33443434383244355pfkB family carbohydrate kinase
1517Glycosyl hydrolases family 28
112Luciferase-like monooxygenase
22222222222222230Ribosomal protein L3
22222223222232232Ribosomal protein L11, RNA binding domain
13121015121211131213128121512182Histidine phosphatase superfamily (branch 1)
11111111111111115Thymidylate synthase
44444444444444460ATP synthase alpha/beta chain, C terminal domain
65454445554544367Calponin homology (CH) domain
54555466454475473Glutamine amidotransferases class-II
22222222522222233Ribosomal protein S15
21111111111111116Fructose-1-6-bisphosphatase, N-terminal domain
12122211212222225Ribonucleotide reductase, all-alpha domain
22222222221232230Ribosomal protein S2
12232222242241233SRF-type transcription factor (DNA-binding and dimerisation domain)
975888710877910810121GATA zinc finger
46271430242992322643036242943450Amino acid permease
22222222232222332Prolyl oligopeptidase family
23231314323243238Ribosomal protein L30p/L7e
143344984113365674Histidine phosphatase superfamily (branch 2)
111111111111113Respiratory-chain NADH dehydrogenase, 30 Kd subunit
54444444464544464Aconitase family (aconitate hydratase)
314Glycosyl hydrolase family 10
12234333455234347Glycosyl hydrolases family 17
22122222212222228Ribosomal protein S5, N-terminal domain
11111111111111115Nucleoside diphosphate kinase
22Galactoside-binding lectin
22112212222121225Ribosomal protein S10p/S20e
4553126345232449Arrestin (or S-antigen), N-terminal domain
11111111111111115Phosphoglucose isomerase
1111111111111114Carbohydrate phosphorylase
12122112212222225SecY translocase
111111111111113Respiratory-chain NADH dehydrogenase, 49 Kd subunit
33224323322232339Ribosomal protein L6
33333333373333349Polyprenyl synthetase
34334324463353353Hexokinase
33333334383333351Dynamin family
11111111111111115Transcription factor TFIID (or TATA-binding protein, TBP)
321224213102211339Rieske [2Fe-2S] domain
11Phytochrome region
235Proton-conducting membrane transporter
6697677771076867106Biotin-requiring enzyme
22122213212222228Phosphofructokinase
22222223212232231Ribosomal protein S17
11111111231121119Hydroxymethylglutaryl-coenzyme A reductase
34333433452332449FGGY family of carbohydrate kinases, N-terminal domain
337322442142334460Enoyl-CoA hydratase/isomerase
22222223222232232Ribosomal protein S9/S16
22222232222233233Transcription factor TFIIB repeat
676666467107666594Cytidine and deoxycytidylate deaminase zinc-binding region
111111112111114Molybdopterin oxidoreductase
22122242252122233Chromo (CHRromatin Organisation MOdifier) domain
11111111121111116Phosphatidylinositol-specific phospholipase C, Y domain
11112111121211118Phosphatidylinositol-specific phospholipase C, X domain
865645845104446685D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
11111111221111117Malic enzyme, N-terminal domain
211111111211211186-phosphogluconate dehydrogenase, C-terminal domain
22132292393232550Multicopper oxidase
653546810595756690WW domain
21221122221222226Ribosomal RNA adenine dimethylase
310124423101545Yeast PIR protein repeat
8887848586861001049011486848889931,364WD domain, G-beta repeat
33344353453534456Heavy-metal-associated domain
43333433333333347Adenylate kinase
23222322222232334Phosphoglucomutase/phosphomannomutase, C-terminal domain
13233312313222233Ribosomal protein S8
11111112111121117Ribosomal protein S11
43322333333342243LIM domain
2121111221111118Regulator of chromosome condensation (RCC1) repeat
22222214222232232Ribosomal protein S13/S18
11
22222222222222230chorismate binding enzyme
5535453553555556860s Acidic ribosomal protein
44444444454444360Prenyltransferase and squalene oxidase repeat
97576668666486595Protein kinase C terminal domain
11111111111111115Single-strand binding protein family
1111111211121116S-adenosylmethionine synthetase, N-terminal domain
998989711981091089133Bromodomain
721651432242Acyl-CoA dehydrogenase, C-terminal domain
151512141513171315151416161515220Ubiquitin carboxyl-terminal hydrolase
11111111111112Ribosomal protein L36
11121111121211118Ribonuclease T2 family
44344434434452557HSF-type DNA-binding
22222222222222230SRP54-type protein, GTPase domain
22Urease alpha-subunit, N-terminal domain
732523234103433357Serine carboxypeptidase
878788878778988116Phosphatidylinositol 3- and 4-kinase
13131332151221231Transketolase, thiamine diphosphate binding domain
11Glycosyl hydrolases family 11
11211121141131324Inositol monophosphatase family
55245547445477472Glutaredoxin
21221322151121228Isocitrate lyase family
22222212222222229Serine hydroxymethyltransferase
1114119Iron-containing alcohol dehydrogenase
22222223222222231Ribosomal protein L10
31423347332674456KOW motif
1111