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PFAM Domains • Corynespora cassiicola CCP v1.0
Annotations/GenomesCorca1Karrh1Lenfl1Melpu1Plesi1Trepe1TotalAnnotation Description
PFAMs
10,9499,56610,23510,4998,75110,38260,382
111147 transmembrane receptor (rhodopsin family)
595753524276339ATPase family associated with various cellular activities (AAA)
554755544253306ABC transporter
44444424ATP synthase alpha/beta family, nucleotide-binding domain
2114EGF-like domain
13141414141483Elongation factor Tu GTP binding domain
12101410101268Helix-loop-helix DNA-binding domain
33333318Hsp20/alpha crystallin family
88898849Hsp70 protein
87988848KH domain
1111116SH2 domain
232324232624143SH3 domain
10111011101062Actin
1068118013659119681Ankyrin repeat
64345325PAN domain
79788847ADP-ribosylation factor family
1291111101669Eukaryotic aspartyl protease
44444424Cyclic nucleotide-binding domain
11Cytochrome b/b6/petB
1111116Cytochrome c
1211128Double-stranded RNA binding motif
161718201817106EF hand
11111164Fe-4S binding domain
33263320Fibronectin type III domain
1111217Globin
191722191416107Glutathione S-transferase, C-terminal domain
1111116Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
1078781050Homeodomain
34343320lactate/malate dehydrogenase, NAD binding domain
112Low-density lipoprotein receptor repeat class B
44455426Myosin head (motor domain)
2301581841851191861,062Cytochrome P450
149127172171120254993Protein kinase domain
251821221921126Pyridine nucleotide-disulphide oxidoreductase
252526262528155Ras family
212323222320132Response regulator receiver domain
25213518RNase H
606062636465374RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
33333217Copper/zinc superoxide dismutase (SODC)
22222212Iron/manganese superoxide dismutases, alpha-hairpin domain
15141517101384Subtilase family
1259283967891565Sugar (and other) transporter
10131312111170Thioredoxin
46332119Trypsin
44444424Tubulin/FtsZ family, GTPase domain
63633526von Willebrand factor type A domain
906269805887446Zinc finger, C2H2 type
6569646861102429Zinc finger, C3HC4 type (RING finger)
44957938Zinc knuckle
22222313Protein-tyrosine phosphatase
2241711872311491851,147short chain dehydrogenase
9873931016085510Zinc-binding dehydrogenase
67666637Thiolase, N-terminal domain
362035461622175Beta-ketoacyl synthase, N-terminal domain
687667402Fe-2S iron-sulfur cluster binding domain
11125Papain family cysteine protease
1111127Enolase, C-terminal TIM barrel domain
11Cytochrome C and Quinol oxidase polypeptide I
998108852Glutamine amidotransferase class-I
10101010101060TCP-1/cpn60 chaperonin family
33343319Glutamine synthetase, catalytic domain
22222212Triosephosphate isomerase
221418181317102E1-E2 ATPase
87788745Core histone H2A/H2B/H3/H4
111216Copper binding proteins, plastocyanin/azurin family
871013101058Alpha amylase, catalytic domain
221229Phorbol esters/diacylglycerol binding domain (C1 domain)
77887744Bacterial transferase hexapeptide (six repeats)
43453322tRNA synthetases class I (I, L, M and V)
87877744Cyclin, N-terminal domain
443234404031221Carboxylesterase family
44444424DNA polymerase family B
44444424ATP synthase subunit C
9913751053Peroxidase
241720261224123Beta-lactamase
34234319C-5 cytosine-specific DNA methylase
262826302629165Calcineurin-like phosphoesterase
14161315121585Cellulase (glycosyl hydrolase family 5)
77787743tRNA synthetases class II (D, K and N)
434042414043249Mitochondrial carrier protein
232220221819124Aminotransferase class I and II
99999954Phosphoribosyl transferase domain
1091110101060Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111116Phosphoglycerate kinase
32222213Ribosomal protein S4/S9 N-terminal domain
22222212Ribosomal protein S12/S23
1111116Bacterial regulatory helix-turn-helix proteins, AraC family
1111116Chaperonin 10 Kd subunit
13131410101272C2 domain
181920211818114PH domain
898119853bZIP transcription factor
312321241926144Aldehyde dehydrogenase family
3032352412901942341,497Fungal Zn(2)-Cys(6) binuclear cluster domain
282324252324147Cytochrome b5-like Heme/Steroid binding domain
54332320Oxidoreductase molybdopterin binding domain
281817171716113Oxidoreductase NAD-binding domain
292832302526170SNF2 family N-terminal domain
22222212Ribosomal protein S7p/S5e
242423242226143Ubiquitin-conjugating enzyme
98877645Isocitrate/isopropylmalate dehydrogenase
22222212Ribosomal Proteins L2, RNA binding domain
1111116Hsp90 protein
22222212Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111116Dihydrofolate reductase
667114741Chitin recognition protein
64453325Cysteine-rich secretory protein family
1111116Ribosomal protein S3, C-terminal domain
66644733Cupin
22222212Annexin
22221211Eukaryotic-type carbonic anhydrase
1113Chalcone and stilbene synthases, N-terminal domain
433333192-oxoacid dehydrogenases acyltransferase (catalytic domain)
62642626Catalase
1111116Disintegrin
2215UDP-glucoronosyl and UDP-glucosyl transferase
810889952Aminotransferase class-III
22222212Ribosomal protein S19
1111116DNA gyrase B
107798849Thiamine pyrophosphate enzyme, central domain
54444425Lyase
22222212Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
3121119Sodium:neurotransmitter symporter family
1111116Adenylate and Guanylate cyclase catalytic domain
1111116ATP synthase delta (OSCP) subunit
1111116Orotidine 5'-phosphate decarboxylase / HUMPS family
1111116Indole-3-glycerol phosphate synthase
22321212Aromatic amino acid lyase
1111116Pyruvate kinase, barrel domain
10111211111065Kinesin motor domain
323638313243212DnaJ domain
14141414141484Proteasome subunit
888671047Major intrinsic protein
1111116ATP synthase
46333322Glycosyl hydrolase family 1
11111163'5'-cyclic nucleotide phosphodiesterase
1111116Profilin
1111116Ribosomal protein L22p/L17e
22222212Ribosomal protein L14p/L23e
10141210101268Ubiquitin family
75555431Cofilin/tropomyosin-type actin-binding protein
2222221214-3-3 protein
76465533Alkaline phosphatase
96767338Zinc carboxypeptidase
414136392843228Aldo/keto reductase family
19141813121894Myb-like DNA-binding domain
44444424Forkhead domain
24422216Glycosyl hydrolases family 32 N-terminal domain
1111116Ribosomal protein L16p/L10e
23323417Ribosomal protein S14p/S29e
55445427FKBP-type peptidyl-prolyl cis-trans isomerase
1111116Glutathione peroxidase
1111116
1378108854Flavodoxin
112Protamine P1
1111116Calreticulin family
24181315141397Common central domain of tyrosinase
788107848Aminotransferase class-V
1111116Ribonucleotide reductase, small chain
383940404240239DEAD/DEAH box helicase
767780778276468Helicase conserved C-terminal domain
1111116EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22122211Ribosomal protein L23
1111116Pyridoxal-dependent decarboxylase, C-terminal sheet domain
22222212Ribosomal protein L5
67687741Pyridoxal-dependent decarboxylase conserved domain
33322316Citrate synthase, C-terminal domain
65565633GHMP kinases N terminal domain
87676741Biotin carboxylase, N-terminal domain
1111116Tryptophan synthase alpha chain
1211121081164Pyridoxal-phosphate dependent enzyme
15161614171997NUDIX domain
56655936pfkB family carbohydrate kinase
12127710957Glycosyl hydrolases family 28
22116Luciferase-like monooxygenase
22222212Ribosomal protein L3
22222313Ribosomal protein L11, RNA binding domain
15121515141788Histidine phosphatase superfamily (branch 1)
1111116Thymidylate synthase
1113Lipoxygenase
44444424ATP synthase alpha/beta chain, C terminal domain
55554529Calponin homology (CH) domain
55645429Glutamine amidotransferases class-II
22222212Ribosomal protein S15
1111116Thaumatin family
22222212Fructose-1-6-bisphosphatase, N-terminal domain
1111116Ribonucleotide reductase, all-alpha domain
22222212Ribosomal protein S2
22212211SRF-type transcription factor (DNA-binding and dimerisation domain)
67676739GATA zinc finger
574748564858314Amino acid permease
95666537Prolyl oligopeptidase family
32333216Ribosomal protein L30p/L7e
11121313111272Histidine phosphatase superfamily (branch 2)
1111116Respiratory-chain NADH dehydrogenase, 30 Kd subunit
65445428Aconitase family (aconitate hydratase)
55543527Glycosyl hydrolase family 10
12333315Glycosyl hydrolases family 17
22222212Ribosomal protein S5, N-terminal domain
1111116Nucleoside diphosphate kinase
1111116Ribosomal protein S10p/S20e
66677537Arrestin (or S-antigen), N-terminal domain
1111116Phosphoglucose isomerase
1111116Carbohydrate phosphorylase
1111116SecY translocase
1111116Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222212Ribosomal protein L6
53334422Polyprenyl synthetase
56545530Hexokinase
786107644Dynamin family
1111116Transcription factor TFIID (or TATA-binding protein, TBP)
86655636Rieske [2Fe-2S] domain
1113Phytochrome region
109898953Biotin-requiring enzyme
1111116Phosphofructokinase
22222212Ribosomal protein S17
4111119Hydroxymethylglutaryl-coenzyme A reductase
33333318FGGY family of carbohydrate kinases, N-terminal domain
11114Sodium:dicarboxylate symporter family
14141415141485Enoyl-CoA hydratase/isomerase
22222212Ribosomal protein S9/S16
22222212Transcription factor TFIIB repeat
68977845Cytidine and deoxycytidylate deaminase zinc-binding region
1111116Molybdopterin oxidoreductase
54746834Chromo (CHRromatin Organisation MOdifier) domain
33333318Phosphatidylinositol-specific phospholipase C, Y domain
33334319Phosphatidylinositol-specific phospholipase C, X domain
1471112111267D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
22222212Malic enzyme, N-terminal domain
222112106-phosphogluconate dehydrogenase, C-terminal domain
20121520141798Multicopper oxidase
1012101091061WW domain
1111116Ribosomal RNA adenine dimethylase
22221211Yeast PIR protein repeat
115105160117103111711WD domain, G-beta repeat
65555531Heavy-metal-associated domain
54543627Adenylate kinase
33333217Phosphoglucomutase/phosphomannomutase, C-terminal domain
21222211Ribosomal protein S8
22221110Ribosomal protein S11
44454425LIM domain
11321311Matrixin
1111127Regulator of chromosome condensation (RCC1) repeat
21222211Ribosomal protein S13/S18
33322215chorismate binding enzyme
3444442360s Acidic ribosomal protein
54554528Prenyltransferase and squalene oxidase repeat
66566736Protein kinase C terminal domain
1111116Single-strand binding protein family
1111116S-adenosylmethionine synthetase, N-terminal domain
76888744Bromodomain
16101518161691Acyl-CoA dehydrogenase, C-terminal domain
16171416151492Ubiquitin carboxyl-terminal hydrolase
1111116Ribosomal protein L36
22222212Ribonuclease T2 family
11Gonadotropin-releasing hormone
34333319HSF-type DNA-binding
22222212SRP54-type protein, GTPase domain
1111116Urease alpha-subunit, N-terminal domain
12121113111372Serine carboxypeptidase
1113Apoptosis regulator proteins, Bcl-2 family
88888848Phosphatidylinositol 3- and 4-kinase
44323420Transketolase, thiamine diphosphate binding domain
45455528Glycosyl hydrolases family 11
55555530Inositol monophosphatase family
44444424Glutaredoxin
65455429Isocitrate lyase family
22322314Serine hydroxymethyltransferase
53444424Iron-containing alcohol dehydrogenase
22222212Ribosomal protein L10
42333419KOW motif
1111116Ribosomal protein L34
22221211RF-1 domain
46276328Sodium:solute symporter family
1211117Imidazoleglycerol-phosphate dehydratase
1111116DNA polymerase family A
1111116IMP dehydrogenase / GMP reductase domain
1111116Glucose-6-phosphate dehydrogenase, NAD binding domain
66666636Protein phosphatase 2C
33333419Nucleotidyl transferase
43442421Carbonic anhydrase
1111116Phosphoribulokinase / Uridine kinase family
879118750Fatty acid desaturase
66666636MutS domain V
1111116Delta-aminolevulinic acid dehydratase
76555432Arginase family
66666636MCM P-loop domain
22232213Squalene/phytoene synthase
112Bacterial extracellular solute-binding proteins, family 5 Middle
11Bacterial extracellular solute-binding proteins, family 3
986991152FHA domain
654957594753330AMP-binding enzyme
54654529G-protein alpha subunit
98977848HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
182120192016114His Kinase A (phospho-acceptor) domain
43335321Armadillo/beta-catenin-like repeat
342139322635187Tetratricopeptide repeat
53454526Ion transport protein
1111116DNA gyrase/topoisomerase IV, subunit A
12121412121375BRCA1 C Terminus (BRCT) domain
67877742Glycosyl transferases group 1
85372328Glycosyl transferase family 2
34332419SAM domain (Sterile alpha motif)
1111116linker histone H1 and H5 family
1111116Ribosomal protein L7/L12 C-terminal domain
168656344Pectate lyase
1121117ribonuclease
1111116Urease, gamma subunit
44444424CoA-ligase
361931301523154Phosphopantetheine attachment site
33333318Formyl transferase
109899954Metallopeptidase family M24
14121515151485Leucine Rich Repeat
716046533851319alpha/beta hydrolase fold
33333419RNA polymerase Rpb2, domain 6
33443320PB1 domain
22222212Staphylococcal nuclease homologue
11111211111167Rab-GTPase-TBC domain
1121117Tudor domain
1111116WH1 domain
65354326Zinc finger, ZZ type
33433319HRDC domain
991099955CBS domain
22222212Ribosomal protein L13
22222212Ribosomal protein L4/L1 family
1111116Clp protease
24244218S1 RNA binding domain
1111116HIUase/Transthyretin family
45753731AhpC/TSA family
44454526tRNA synthetases class I (W and Y)
1112117UvrD/REP helicase N-terminal domain
44755631Rhodanese-like domain
22221211Universal stress protein family
535451553854305Acetyltransferase (GNAT) family
1111116SecE/Sec61-gamma subunits of protein translocation complex
1111116C-terminal regulatory domain of Threonine dehydratase
22222212AIR synthase related protein, N-terminal domain
88888848tRNA synthetase class II core domain (G, H, P, S and T)
22222212SpoU rRNA Methylase family
22222212Tetrapyrrole (Corrin/Porphyrin) Methylases
1221129Glycosyl transferase family, a/b domain
1111116PDZ domain
96797846Class II Aldolase and Adducin N-terminal domain
43433421Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
55544528Fes/CIP4, and EFC/F-BAR homology domain
44345424IQ calmodulin-binding motif
22222212Phosphoinositide 3-kinase family, accessory domain (PIK domain)
55566532Phospholipase D Active site motif
111115Regulator of G protein signaling domain
33333318GTPase-activator protein for Ras-like GTPase
44444424RasGEF domain
44444424RasGEF N-terminal motif
88888848RhoGAP domain
66656736RhoGEF domain
23222314SPRY domain
33333318RNA polymerase Rpb1, domain 2
1112128Guanylate kinase
44444424Gelsolin repeat
101091191059UBA/TS-N domain
181818201719110PHD-finger
1111116GGL domain
55555530HECT-domain (ubiquitin-transferase)
12222110Helix-hairpin-helix motif
1111116MSP (Major sperm protein) domain
97647740Ribonuclease III domain
22223213Region in Clathrin and VPS
22222212RanBP1 domain
22222212PPIC-type PPIASE domain
2211118Zn-finger in Ran binding protein and others
192816222223130Zinc finger C-x8-C-x5-C-x3-H type (and similar)
42333318Poly(ADP-ribose) polymerase catalytic domain
22221211Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
79101839678131568F-box domain
1111116Elongation factor 1 gamma, conserved domain
33433319Calpain family cysteine protease
22232112Copper fist DNA binding domain
55555530CRAL/TRIO domain
152626211739144BTB/POZ domain
41132314Ricin-type beta-trefoil lectin domain
1111116Inhibitor of Apoptosis domain
43444423Voltage gated chloride channel
42532420Caspase domain
172014171517100GDSL-like Lipase/Acylhydrolase
1111116Poly-adenylate binding protein, unique domain
1112128POLO box duplicated region
262323281923142ABC transporter transmembrane region
1478118856FAD binding domain
10119107956Condensation domain
1111116S-adenosyl-L-homocysteine hydrolase, NAD binding domain
1111116HAMP domain
22222212ribosomal L5P family C-terminus
75566534Insulinase (Peptidase family M16)
33333318Dehydrogenase E1 component
1111116Lumazine binding domain
67666637Elongation factor G C-terminus
55444426HMGL-like
44455426DnaJ central domain
34355424Starch binding domain
33333318Ribosomal protein L1p/L10e family
1461095953Cation transporting ATPase, C-terminus
13711107755Cation transporter/ATPase, N-terminus
1211117dUTPase
55445427Aconitase C-terminal domain
33344320Amino acid kinase family
1111116N-(5'phosphoribosyl)anthranilate (PRA) isomerase
341833411420160Acyl transferase domain
1111116Urease beta subunit
98786745Dihydrodipicolinate synthetase family
453239373338224haloacid dehalogenase-like hydrolase
126677846Glycosyl hydrolases family 2
13131311141377Glycosyl hydrolases family 18
1111116Proliferating cell nuclear antigen, N-terminal domain
1111116Acylphosphatase
1111116Adenylosuccinate synthetase
32233316Asparaginase, N-terminal
42211212Peptidase S24-like
2111117Inorganic pyrophosphatase
1111109101162Glycosyl hydrolases family 16
24344421Glycosyl hydrolases family 15
149597751NADH:flavin oxidoreductase / NADH oxidase family
531222153-hydroxyacyl-CoA dehydrogenase, C-terminal domain
44343422Glycosyl hydrolase family 20, catalytic domain
46554428HhH-GPD superfamily base excision DNA repair protein
1111116AIR carboxylase
452932312133191GMC oxidoreductase
33322215Asparagine synthase
913109121467Fungal cellulose binding domain
66666535Septin
1111116EF-1 guanine nucleotide exchange domain
1111116Homoserine dehydrogenase
34232216Flavin-binding monooxygenase-like
11LPXTG cell wall anchor motif
33333318tRNA synthetases class I (E and Q), catalytic domain
32323417tRNA synthetases class I (R)
54453425XPG N-terminal domain
2513141591692Metallo-beta-lactamase superfamily
121318F5/8 type C domain
33232215Choline/Carnitine o-acyltransferase
1111116Putative esterase
1111116Ferrochelatase
22222212Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1121117Arginosuccinate synthase
1111116Electron transfer flavoprotein FAD-binding domain
33333318RNB domain
1271010111060Dioxygenase
33333318CNH domain
2111117Diacylglycerol kinase catalytic domain
98999953Dual specificity phosphatase, catalytic domain
42333318P21-Rho-binding domain
12121212141375PX domain
32233316Ras association (RalGDS/AF-6) domain
66666636UBX domain
44444424VHS domain
1111116Phosphoinositide 3-kinase C2
22222212DAHP synthetase I family
179101691273Carbon-nitrogen hydrolase
312219N-acetyltransferase
1111116Prephenate dehydratase
44544425Syntaxin
55555530Pumilio-family RNA binding repeat
67666637Histone-like transcription factor (CBF/NF-Y) and archaeal histone
1111116Pterin binding enzyme
22222212ER lumen protein retaining receptor
22222212tRNA N6-adenosine threonylcarbamoyltransferase
1121117Histidinol dehydrogenase
44444424impB/mucB/samB family
1111116
1111116Ribosomal L15
1111116Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
1111116Ribosomal L28 family
1111116Ribosomal L29 protein
1111116Ribosomal L39 protein
2111128Ribosomal S17
1111116Ribulose-phosphate 3 epimerase family
1111116Translationally controlled tumour protein
66578739Glycosyl hydrolase family 7
1111116RNA pseudouridylate synthase
43444423Histone deacetylase domain
910786848POT family
1111116PWWP domain
252625181729140SET domain
11111118111375Isochorismatase family
43443422Permease family
1111116Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
55455529XPG I-region
11114Acetokinase family
22333215DNA photolyase
11114NlpC/P60 family
213Nitroreductase family
1024531438Sulfatase
11111166,7-dimethyl-8-ribityllumazine synthase
1111116Ribosomal protein S16
22222212Acyl CoA binding protein
44454425Cullin family
17111214131683FAD binding domain
301530181426133O-methyltransferase domain
46354325EamA-like transporter family
22222212
88888848ThiF family
1111116Ribosomal family S4e
9781261355Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
53655630Ammonium Transporter Family
87765740Sulfate permease family
2111117MATH domain
33322215Dehydratase family
2121129Transaldolase/Fructose-6-phosphate aldolase
23222213Mechanosensitive ion channel
1111116GTP cyclohydrolase II
11111163,4-dihydroxy-2-butanone 4-phosphate synthase
44444424Adaptor complexes medium subunit family
76566535Exonuclease
42222214Dipeptidyl peptidase IV (DPP IV) N-terminal region
1315NB-ARC domain
281515181414104Glycosyl hydrolase family 3 N terminal domain
1111116Ribosomal protein L44
1111116DNA-dependent RNA polymerase
22222212FAD binding domain in molybdopterin dehydrogenase
1111116Glycosyl transferase family 4
22321212HCO3- transporter family
22222212Nucleosome assembly protein (NAP)
44444424Synaptobrevin
1111116GMP synthase C terminal domain
1113Phage lysozyme
33LAGLIDADG endonuclease
76565534Adenosine/AMP deaminase
9118810753Oxidoreductase FAD-binding domain
94884437Thioesterase domain
22222212Histidine biosynthesis protein
33333318Glycosyltransferase family 20
1225UDP-glucose/GDP-mannose dehydrogenase family, central domain
22222212Carbamoyl-phosphate synthase small chain, CPSase domain
33443320PAS fold
112Diguanylate cyclase, GGDEF domain
23222213Probable molybdopterin binding domain
44444424Sec1 family
22222212GDP dissociation inhibitor
1281065950Sodium/hydrogen exchanger family
22222212RNA polymerase Rpb3/RpoA insert domain
55545529Initiation factor 2 subunit family
22PQQ enzyme repeat
22222212Electron transfer flavoprotein domain
1111116Uricase
1111116Ribosomal S3Ae family
1111116Ribosomal L27 protein
1111116GTP1/OBG
23232214Gamma-glutamyltranspeptidase
1113Ribosomal L40e family
1111116GrpE
33222214TatD related DNase
1111116Inhibitor of apoptosis-promoting Bax1
1111116Eukaryotic DNA topoisomerase I, catalytic core
33354