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PFAM Domains • Triparticalcar arcticum BR59 v1.0
Annotations/GenomesBlyhe1Chylag1Chytri1Gaesem1Obemuc1Rhihy1Spipu1Triarc1TotalAnnotation Description
PFAMs
6,5469,27712,4088,39912,19810,0538,3749,19376,448
31311381115221047 transmembrane receptor (rhodopsin family)
14387 transmembrane receptor (Secretin family)
5321715854216222347 transmembrane sweet-taste receptor of 3 GCPR
2745544554494845367ATPase family associated with various cellular activities (AAA)
6610110746991305548652ABC transporter
4484444436ATP synthase alpha/beta family, nucleotide-binding domain
11EGF-like domain
1418201721181717142Elongation factor Tu GTP binding domain
71523827181211121Helix-loop-helix DNA-binding domain
13613414128474Hsp20/alpha crystallin family
118988138974Hsp70 protein
87101281012875KH domain
11114Kunitz/Bovine pancreatic trypsin inhibitor domain
11SH2 domain
2130511860606926335SH3 domain
11101011119111487Actin
332231439128536298Ankyrin repeat
256191134PAN domain
111191013915987ADP-ribosylation factor family
3710386153099154Eukaryotic aspartyl protease
1522631076772316302Cyclic nucleotide-binding domain
11Cystatin domain
1157Cytochrome b(C-terminal)/b6/petD
11Cytochrome b/b6/petB
1113211111Cytochrome c
2144257227Double-stranded RNA binding motif
33124247199EF hand
1234Fe-4S binding domain
213Fibronectin type II domain
232135117Fibronectin type III domain
112Globin
6713411186368Glutathione S-transferase, C-terminal domain
1133112214Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
910611161571811238Homeodomain
1919Kazal-type serine protease inhibitor domain
4334224325lactate/malate dehydrogenase, NAD binding domain
11Lectin C-type domain
101217812139889Myosin head (motor domain)
212441103146124189Cytochrome P450
1251852551382722541511501,530Protein kinase domain
8111111912121084Pyridine nucleotide-disulphide oxidoreductase
2241553037343233284Ras family
1023112816124239181Response regulator receiver domain
323267225RNase H
46757866761038970603RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
123Reverse transcriptase (RNA-dependent DNA polymerase)
22Serpin (serine protease inhibitor)
1463635331Copper/zinc superoxide dismutase (SODC)
341222115Iron/manganese superoxide dismutases, alpha-hairpin domain
1643171117221328167Subtilase family
910345111181098Sugar (and other) transporter
1014301222171513133Thioredoxin
55Trefoil (P-type) domain
2259Trypsin
5577787652Tubulin/FtsZ family, GTPase domain
31225114von Willebrand factor type A domain
62211113von Willebrand factor type D domain
165310418691618634541Zinc finger, C2H2 type
4775982697190Zinc finger, C3HC4 type (RING finger)
49781022121385Zinc knuckle
3435453633Protein-tyrosine phosphatase
2632562633453629283short chain dehydrogenase
810161314212115118Zinc-binding dehydrogenase
4555645438Thiolase, N-terminal domain
3223433323Beta-ketoacyl synthase, N-terminal domain
22231432192Fe-2S iron-sulfur cluster binding domain
1315Papain family cysteine protease
11112118Enolase, C-terminal TIM barrel domain
1236Cytochrome C and Quinol oxidase polypeptide I
2125Cytochrome C oxidase subunit II, periplasmic domain
8787878861Glutamine amidotransferase class-I
13111310910101086TCP-1/cpn60 chaperonin family
1135ATP synthase A chain
3462443228Glutamine synthetase, catalytic domain
1121121110Triosephosphate isomerase
3628392332312228239E1-E2 ATPase
1518191338271413157Core histone H2A/H2B/H3/H4
11Bacterial regulatory helix-turn-helix protein, lysR family
11114Copper binding proteins, plastocyanin/azurin family
24310118635Alpha amylase, catalytic domain
528691012860Phorbol esters/diacylglycerol binding domain (C1 domain)
55108989660Bacterial transferase hexapeptide (six repeats)
1554423529tRNA synthetases class I (I, L, M and V)
8113011121399103Cyclin, N-terminal domain
7942123230Carboxylesterase family
751044126452DNA polymerase family B
4353343631ATP synthase subunit C
1113Legume lectin domain
33817211132187Peroxidase
1277213172262Beta-lactamase
5569885652C-5 cytosine-specific DNA methylase
224NADH dehydrogenase
11Fibrinogen beta and gamma chains, C-terminal globular domain
1514321427291917167Calcineurin-like phosphoesterase
241061075549Cellulase (glycosyl hydrolase family 5)
4655556642tRNA synthetases class II (D, K and N)
2544674052555141375Mitochondrial carrier protein
719221620191614133Aminotransferase class I and II
6465689549Phosphoribosyl transferase domain
1215201519191816134Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
121321111Phosphoglycerate kinase
1233332219Ribosomal protein S4/S9 N-terminal domain
2224233220Ribosomal protein S12/S23
112111119Chaperonin 10 Kd subunit
622221517172722148C2 domain
98101313194617135PH domain
611411439201415160bZIP transcription factor
12122010161699104Aldehyde dehydrogenase family
713691345802517269Fungal Zn(2)-Cys(6) binuclear cluster domain
2323412436343526242Cytochrome b5-like Heme/Steroid binding domain
1232114115Oxidoreductase molybdopterin binding domain
67139131617889Oxidoreductase NAD-binding domain
2222302528312926213SNF2 family N-terminal domain
1222222215Ribosomal protein S7p/S5e
1224342230292622199Ubiquitin-conjugating enzyme
5575555744Isocitrate/isopropylmalate dehydrogenase
2242222218Ribosomal Proteins L2, RNA binding domain
8211039Chitinase class I
3222322218Hsp90 protein
232322216Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
211111119Dihydrofolate reductase
23215619Chitin recognition protein
31030122172186Cysteine-rich secretory protein family
1123211213Ribosomal protein S3, C-terminal domain
333211Annexin
391761128Eukaryotic-type carbonic anhydrase
53443343292-oxoacid dehydrogenases acyltransferase (catalytic domain)
2226Catalase
11121118Disintegrin
322331418UDP-glucoronosyl and UDP-glucosyl transferase
345345428Aminotransferase class-III
2242222218Ribosomal protein S19
5112112215DNA gyrase B
11211219Thiamine pyrophosphate enzyme, central domain
2463334429Lyase
224541119Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
112Sodium:neurotransmitter symporter family
11316Ferritin-like domain
104227725191213155Adenylate and Guanylate cyclase catalytic domain
112111119ATP synthase delta (OSCP) subunit
111111118Orotidine 5'-phosphate decarboxylase / HUMPS family
11ATP:guanido phosphotransferase, C-terminal catalytic domain
211111119Indole-3-glycerol phosphate synthase
2518Aromatic amino acid lyase
2453433327Pyruvate kinase, barrel domain
2526241830262720196Kinesin motor domain
1927413137353734261DnaJ domain
1414221414141414120Proteasome subunit
24926103339Major intrinsic protein
111111118ATP synthase
3465422Glycosyl hydrolase family 1
51312591088703'5'-cyclic nucleotide phosphodiesterase
2242112216Profilin
343222319Ribosomal protein L22p/L17e
1323322319Ribosomal protein L14p/L23e
456116Resolvase, N terminal domain
1616211314202317140Ubiquitin family
455546534Cofilin/tropomyosin-type actin-binding protein
11112111914-3-3 protein
22314105229Alkaline phosphatase
314731194556Zinc carboxypeptidase
91517101515129102Aldo/keto reductase family
8775913211080Myb-like DNA-binding domain
1422123318Forkhead domain
222331215Ribosomal protein L16p/L10e
233522219Ribosomal protein S14p/S29e
5812810117869FKBP-type peptidyl-prolyl cis-trans isomerase
2232242118Glutathione peroxidase
112
15767810549Flavodoxin
11Tropomyosin
3231222217Calreticulin family
111032121123898Common central domain of tyrosinase
4785775548Aminotransferase class-V
6223222221Ribonucleotide reductase, small chain
4854614768534966446DEAD/DEAH box helicase
62799281989591100698Helicase conserved C-terminal domain
11114Fructose-bisphosphate aldolase class-I
1111221110EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
223212214Ribosomal protein L23
2111121110Pyridoxal-dependent decarboxylase, C-terminal sheet domain
11122119Ribosomal protein L5
4693565442Pyridoxal-dependent decarboxylase conserved domain
4565534436Citrate synthase, C-terminal domain
3785666546GHMP kinases N terminal domain
61077797659Biotin carboxylase, N-terminal domain
2121111110Tryptophan synthase alpha chain
6912715149981Pyridoxal-phosphate dependent enzyme
711131068151484NUDIX domain
4563586441pfkB family carbohydrate kinase
145120Glycosyl hydrolases family 28
1232322217Ribosomal protein L3
1243222218Ribosomal protein L11, RNA binding domain
38767710654Histidine phosphatase superfamily (branch 1)
2111112110Thymidylate synthase
41510Lipoxygenase
3384444434ATP synthase alpha/beta chain, C terminal domain
7131299912879Calponin homology (CH) domain
4254367435Glutamine amidotransferases class-II
1113Phosphoenolpyruvate carboxylase
1222222215Ribosomal protein S15
31111119'Cold-shock' DNA-binding domain
1212410Thaumatin family
111111118Fructose-1-6-bisphosphatase, N-terminal domain
5121111113Ribonucleotide reductase, all-alpha domain
1232232217Ribosomal protein S2
231213416SRF-type transcription factor (DNA-binding and dimerisation domain)
1222331141272317186GATA zinc finger
7315111319380Amino acid permease
61113101213111591Prolyl oligopeptidase family
2342221218Ribosomal protein L30p/L7e
35373310438Histidine phosphatase superfamily (branch 2)
11122119Respiratory-chain NADH dehydrogenase, 30 Kd subunit
3444534431Aconitase family (aconitate hydratase)
112Glycosyl hydrolases family 17
222223215Ribosomal protein S5, N-terminal domain
1685685746Nucleoside diphosphate kinase
3233224221Tetraspanin family
2212211213Ribosomal protein S10p/S20e
651551694969Arrestin (or S-antigen), N-terminal domain
211111119Phosphoglucose isomerase
1121211110Carbohydrate phosphorylase
331221214SecY translocase
13111119Respiratory-chain NADH dehydrogenase, 49 Kd subunit
3233222219Ribosomal protein L6
1353333324Polyprenyl synthetase
1142332218Hexokinase
11556745649Dynamin family
25221113Biopterin-dependent aromatic amino acid hydroxylase
112111119Transcription factor TFIID (or TATA-binding protein, TBP)
755569340Rieske [2Fe-2S] domain
314Phytochrome region
358Proton-conducting membrane transporter
61098898664Biotin-requiring enzyme
1211221111Phosphofructokinase
1223332218Ribosomal protein S17
121131110Hydroxymethylglutaryl-coenzyme A reductase
1232223419FGGY family of carbohydrate kinases, N-terminal domain
223331317FERM central domain
21112119Sodium:dicarboxylate symporter family
11MerR family regulatory protein
613129101211679Enoyl-CoA hydratase/isomerase
2142232117Ribosomal protein S9/S16
2232222217Transcription factor TFIIB repeat
3475796647Cytidine and deoxycytidylate deaminase zinc-binding region
12111118Molybdopterin oxidoreductase
7178615813882Chromo (CHRromatin Organisation MOdifier) domain
11111117Phosphatidylinositol-specific phospholipase C, Y domain
11111117Phosphatidylinositol-specific phospholipase C, X domain
2442532426D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
221123213Malic enzyme, N-terminal domain
21111121106-phosphogluconate dehydrogenase, C-terminal domain
3111198235Multicopper oxidase
7112182022149112WW domain
111111118Ribosomal RNA adenine dimethylase
1281731821591861912021711,392WD domain, G-beta repeat
112Calponin family repeat
3434535431Heavy-metal-associated domain
5797786857Adenylate kinase
3252322221Phosphoglucomutase/phosphomannomutase, C-terminal domain
1232222216Ribosomal protein S8
1322222216Ribosomal protein S11
6961275141372LIM domain
11Matrixin
53104853745Regulator of chromosome condensation (RCC1) repeat
2242222218Ribosomal protein S13/S18
11111229Tau and MAP protein, tubulin-binding repeat
11NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
2222222216chorismate binding enzyme
224253632760s Acidic ribosomal protein
31111119CUB domain
2334445328Prenyltransferase and squalene oxidase repeat
24107101412766Protein kinase C terminal domain
213211111Single-strand binding protein family
1111116S-adenosylmethionine synthetase, N-terminal domain
915101412111916106Bromodomain
811161315161111101Acyl-CoA dehydrogenase, C-terminal domain
915201517171817128Ubiquitin carboxyl-terminal hydrolase
1111116Ribosomal protein L36
426410127Ribonuclease T2 family
5565466643HSF-type DNA-binding
2422212SRP54-type protein, GTPase domain
11111117Urease alpha-subunit, N-terminal domain
13111538123368Serine carboxypeptidase
5913111213101083Phosphatidylinositol 3- and 4-kinase
111111118Transketolase, thiamine diphosphate binding domain
1213112213WHEP-TRS domain
122332215Inositol monophosphatase family
2473365434Glutaredoxin
221112110Isocitrate lyase family
1232232217Serine hydroxymethyltransferase
111111129Iron-containing alcohol dehydrogenase
122332316Ribosomal protein L10
1759686446KOW motif
1111116Ribosomal protein L34
111111118Ribosomal protein L33
333322319RF-1 domain
4122110Sodium:solute symporter family
11211219Imidazoleglycerol-phosphate dehydratase
212112110DNA polymerase family A
121221110IMP dehydrogenase / GMP reductase domain
1111213212Glucose-6-phosphate dehydrogenase, NAD binding domain
79109779866Protein phosphatase 2C
2565566540Nucleotidyl transferase
1263432324Carbonic anhydrase
1143222217Phosphoribulokinase / Uridine kinase family
3617718157881Fatty acid desaturase
5676665647MutS domain V
142111111Delta-aminolevulinic acid dehydratase
221222112Arginase family
69881088966MCM P-loop domain
3352332223Squalene/phytoene synthase
1017161513181913121FHA domain
134NADH-ubiquinone/plastoquinone oxidoreductase chain 6
1922331630312817196AMP-binding enzyme
46305353164121G-protein alpha subunit
129219151312899HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
1113Cytochrome c oxidase subunit III
514517653120103His Kinase A (phospho-acceptor) domain
36668810754Armadillo/beta-catenin-like repeat
1715221521575521223Tetratricopeptide repeat
510193162411896Ion transport protein
4112112214DNA gyrase/topoisomerase IV, subunit A
35476813955BRCA1 C Terminus (BRCT) domain
3913719129779Glycosyl transferases group 1
5252569236Glycosyl transferase family 2
2111041075352SAM domain (Sterile alpha motif)
313122315linker histone H1 and H5 family
1221111110Ribosomal protein L7/L12 C-terminal domain
111111118Urease, gamma subunit
3363333327CoA-ligase
25369912551Phosphopantetheine attachment site
2233224321Formyl transferase
112Cellulose binding domain
6912101012101281Metallopeptidase family M24
12457910137299609651Leucine Rich Repeat
85112937275104alpha/beta hydrolase fold
4363334228RNA polymerase Rpb2, domain 6
78134657858PB1 domain
1212112212Staphylococcal nuclease homologue
1116191718111017119Rab-GTPase-TBC domain
111111118Tudor domain
11111117WH1 domain
16112976446Zinc finger, ZZ type
132212112HRDC domain
1113241215212219137CBS domain
243223218Ribosomal protein L13
2232222217Ribosomal protein L4/L1 family
112111119Clp protease
3354444330S1 RNA binding domain
111115HIUase/Transthyretin family
4475787547AhpC/TSA family
2344444429tRNA synthetases class I (W and Y)
122112110UvrD/REP helicase N-terminal domain
291291688771Rhodanese-like domain
1191992130148121Universal stress protein family
915321623472816186Acetyltransferase (GNAT) family
2121118SecE/Sec61-gamma subunits of protein translocation complex
222221213C-terminal regulatory domain of Threonine dehydratase
2122322115AIR synthase related protein, N-terminal domain
3686887753tRNA synthetase class II core domain (G, H, P, S and T)
1122221112SpoU rRNA Methylase family
344344224Tetrapyrrole (Corrin/Porphyrin) Methylases
2121111110Glycosyl transferase family, a/b domain
1124PDZ domain
112111119Class II Aldolase and Adducin N-terminal domain
12137Diacylglycerol kinase accessory domain
6533357739Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
5878109121271Fes/CIP4, and EFC/F-BAR homology domain
913191017242114127IQ calmodulin-binding motif
1232222216Phosphoinositide 3-kinase family, accessory domain (PIK domain)
11226Phospholipase D Active site motif
101312169471586Regulator of G protein signaling domain
4776537746GTPase-activator protein for Ras-like GTPase
1016151616111417115RasGEF domain
261011108111270RasGEF N-terminal motif
718251323252315149RhoGAP domain
1218161611132018124RhoGEF domain
1776785546SPRY domain
7333333328RNA polymerase Rpb1, domain 2
333232117Guanylate kinase
3766657747Gelsolin repeat
6101381512181092UBA/TS-N domain
711121316143116120PHD-finger
122211211GGL domain
61010510127666HECT-domain (ubiquitin-transferase)
11116111Helix-hairpin-helix motif
11BRCA2 repeat
2112258324MSP (Major sperm protein) domain
1233444324Ribonuclease III domain
5445432532Region in Clathrin and VPS
1442323221RanBP1 domain
1241632120PPIC-type PPIASE domain
6293994547Zn-finger in Ran binding protein and others
4811131327278111Zinc finger C-x8-C-x5-C-x3-H type (and similar)
1113224317B-box zinc finger
3134732427Poly(ADP-ribose) polymerase catalytic domain
1122312214Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
610148231657313312F-box domain
213118Elongation factor 1 gamma, conserved domain
3431641224Calpain family cysteine protease
421111111Copper fist DNA binding domain
482183015910105CRAL/TRIO domain
581292914928114BTB/POZ domain
48111124141Ricin-type beta-trefoil lectin domain
111211119Inhibitor of Apoptosis domain
3373494639Voltage gated chloride channel
462952331Caspase domain
41011612269482GDSL-like Lipase/Acylhydrolase
11112118Poly-adenylate binding protein, unique domain
111111219POLO box duplicated region
11NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
3148492150722217310ABC transporter transmembrane region
485856440FAD binding domain
314546326Condensation domain
111111118S-adenosyl-L-homocysteine hydrolase, NAD binding domain
12225315HAMP domain
232322216ribosomal L5P family C-terminus
3678876752Insulinase (Peptidase family M16)
2385554436Dehydrogenase E1 component
111121119Lumazine binding domain
4576997855Elongation factor G C-terminus
2454445432HMGL-like
252333523DnaJ central domain
112Sulfotransferase domain
123Starch binding domain
2433423324Ribosomal protein L1p/L10e family
1310211416171215118Cation transporting ATPase, C-terminus
1613221217171616129Cation transporter/ATPase, N-terminus
22311110dUTPase
2454534431Aconitase C-terminal domain
4343454330Amino acid kinase family
111111118N-(5'phosphoribosyl)anthranilate (PRA) isomerase
2223333321Acyl transferase domain
11111117Urease beta subunit
2016271622484219210haloacid dehalogenase-like hydrolase
121116Glycosyl hydrolases family 2
92319483585147Glycosyl hydrolases family 18
6121111114Proliferating cell nuclear antigen, N-terminal domain
1111116Translation initiation factor IF-3, C-terminal domain
1113Acylphosphatase
11111117Adenylosuccinate synthetase
121111119Asparaginase, N-terminal
2142344323Peptidase S24-like
121111119Inorganic pyrophosphatase
79411093346Glycosyl hydrolases family 16
6954252437Glycosyl hydrolases family 15
12433553237NADH:flavin oxidoreductase / NADH oxidase family
32222222173-hydroxyacyl-CoA dehydrogenase, C-terminal domain
17223144253Glycosyl hydrolase family 20, catalytic domain
4434336431HhH-GPD superfamily base excision DNA repair protein
11111117AIR carboxylase
1142332218GMC oxidoreductase
232344321Asparagine synthase
189Fungal cellulose binding domain
611119989