PFAM Domains • Paxillus adelphus Ve08.2h10 v2.0
Annotations/GenomesBoled1Gyrli1Hydpi2Paxam1Paxin1Paxru1Paxru2TotalAnnotation Description
PFAMs
7,9317,2708,1997,6698,9487,1697,00654,192
38414141454242290ATPase family associated with various cellular activities (AAA)
31355337473436273ABC transporter
454444429ATP synthase alpha/beta family, nucleotide-binding domain
1414141414131396Elongation factor Tu GTP binding domain
1211111110111177Helix-loop-helix DNA-binding domain
1355668952Hsp20/alpha crystallin family
788797753Hsp70 protein
788888855KH domain
11111117SH2 domain
26253227262727190SH3 domain
1013101011101074Actin
66363949985246386Ankyrin repeat
1189898962ADP-ribosylation factor family
421753927342222361Eukaryotic aspartyl protease
333333321Cyclic nucleotide-binding domain
11Cytochrome b(C-terminal)/b6/petD
11Cytochrome b/b6/petB
1111116Cytochrome c
8107988858Double-stranded RNA binding motif
17171718171615117EF hand
11111164Fe-4S binding domain
1112117Fibronectin type III domain
2012241214810100Glutathione S-transferase, C-terminal domain
11111117Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
14111011109974Homeodomain
11Laminin EGF domain
2310222223lactate/malate dehydrogenase, NAD binding domain
2767666664Myosin head (motor domain)
112Neuraminidase
12698129133196112112906Cytochrome P450
1711591621942741531581,271Protein kinase domain
14132315161111103Pyridine nucleotide-disulphide oxidoreductase
26232523242223166Ras family
679776648Response regulator receiver domain
1461631242RNase H
67626665656262449RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
314Reverse transcriptase (RNA-dependent DNA polymerase)
11111117Copper/zinc superoxide dismutase (SODC)
422222216Iron/manganese superoxide dismutases, alpha-hairpin domain
222122213Subtilase family
35294327322623215Sugar (and other) transporter
1012121112111179Thioredoxin
755555537Tubulin/FtsZ family, GTPase domain
644774537von Willebrand factor type A domain
73555461745764438Zinc finger, C2H2 type
61595664615858417Zinc finger, C3HC4 type (RING finger)
182314191615105Zinc knuckle
232222215Protein-tyrosine phosphatase
63498657634445407short chain dehydrogenase
31233322251616166Zinc-binding dehydrogenase
445443327Thiolase, N-terminal domain
367694439Beta-ketoacyl synthase, N-terminal domain
3334433232Fe-2S iron-sulfur cluster binding domain
11111117Enolase, C-terminal TIM barrel domain
1113Cytochrome C and Quinol oxidase polypeptide I
11Cytochrome C oxidase subunit II, periplasmic domain
778998856Glutamine amidotransferase class-I
1510111013101079TCP-1/cpn60 chaperonin family
11ATP synthase A chain
333442423Glutamine synthetase, catalytic domain
11211118Triosephosphate isomerase
1411121317121291E1-E2 ATPase
16212121201918136Core histone H2A/H2B/H3/H4
11Copper binding proteins, plastocyanin/azurin family
677666644Alpha amylase, catalytic domain
566664538Phorbol esters/diacylglycerol binding domain (C1 domain)
343444426Bacterial transferase hexapeptide (six repeats)
744544432tRNA synthetases class I (I, L, M and V)
1010999101067Cyclin, N-terminal domain
22142522411520159Carboxylesterase family
244454427DNA polymerase family B
533333323ATP synthase subunit C
11112118Peroxidase
6131112Beta-lactamase
444444428C-5 cytosine-specific DNA methylase
112NADH dehydrogenase
32283432313031218Calcineurin-like phosphoesterase
1071411910970Cellulase (glycosyl hydrolase family 5)
556575538tRNA synthetases class II (D, K and N)
35383938433436263Mitochondrial carrier protein
16162018191717123Aminotransferase class I and II
766787748Phosphoribosyl transferase domain
1514141316121296Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11111117Phosphoglycerate kinase
222222214Ribosomal protein S4/S9 N-terminal domain
222222214Ribosomal protein S12/S23
11111117Chaperonin 10 Kd subunit
1312141214121289C2 domain
19191919171818129PH domain
566555537bZIP transcription factor
17151916181111107Aldehyde dehydrogenase family
59535260605453391Fungal Zn(2)-Cys(6) binuclear cluster domain
29262430412424198Cytochrome b5-like Heme/Steroid binding domain
233212215Oxidoreductase molybdopterin binding domain
7108886754Oxidoreductase NAD-binding domain
24232522232224163SNF2 family N-terminal domain
222222214Ribosomal protein S7p/S5e
22232120211919145Ubiquitin-conjugating enzyme
555676640Isocitrate/isopropylmalate dehydrogenase
222222214Ribosomal Proteins L2, RNA binding domain
222222214Hsp90 protein
222212213Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111229Dihydrofolate reductase
11Chitin recognition protein
2211118Cysteine-rich secretory protein family
11111117Ribosomal protein S3, C-terminal domain
2211118Cupin
11Annexin
3333333212-oxoacid dehydrogenases acyltransferase (catalytic domain)
243342220Catalase
11UDP-glucoronosyl and UDP-glucosyl transferase
555555535Aminotransferase class-III
222222214Ribosomal protein S19
11211118DNA gyrase B
433253323Thiamine pyrophosphate enzyme, central domain
444443326Lyase
11111117Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
11111117Adenylate and Guanylate cyclase catalytic domain
11111117ATP synthase delta (OSCP) subunit
11111117Orotidine 5'-phosphate decarboxylase / HUMPS family
11111117Indole-3-glycerol phosphate synthase
11111117Aromatic amino acid lyase
11111117Pyruvate kinase, barrel domain
9109999964Kinesin motor domain
29313029373030216DnaJ domain
14141514161415102Proteasome subunit
344444528Major intrinsic protein
11112118ATP synthase
613131116Glycosyl hydrolase family 1
111111173'5'-cyclic nucleotide phosphodiesterase
21111118Profilin
222222214Ribosomal protein L22p/L17e
222222214Ribosomal protein L14p/L23e
25171520311917144Ubiquitin family
655555536Cofilin/tropomyosin-type actin-binding protein
22223221514-3-3 protein
30284831292424214Aldo/keto reductase family
1313141312121390Myb-like DNA-binding domain
655555536Forkhead domain
11111117Ribosomal protein L16p/L10e
222222214Ribosomal protein S14p/S29e
333343322FKBP-type peptidyl-prolyl cis-trans isomerase
11111117Glutathione peroxidase
111222211
755655538Flavodoxin
11111117Calreticulin family
3469145546Common central domain of tyrosinase
567665540Aminotransferase class-V
422215622Ribonucleotide reductase, small chain
58515250725767407DEAD/DEAH box helicase
97818986110100109672Helicase conserved C-terminal domain
11111117Fructose-bisphosphate aldolase class-I
11111117EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
222222214Ribosomal protein L23
11112118Pyridoxal-dependent decarboxylase, C-terminal sheet domain
11111117Ribosomal protein L5
433252221Pyridoxal-dependent decarboxylase conserved domain
323232217Citrate synthase, C-terminal domain
555545534GHMP kinases N terminal domain
767665542Biotin carboxylase, N-terminal domain
112322213Tryptophan synthase alpha chain
9989117760Pyridoxal-phosphate dependent enzyme
12151615151515103NUDIX domain
433333322pfkB family carbohydrate kinase
449432228Glycosyl hydrolases family 28
222222214Ribosomal protein L3
222222214Ribosomal protein L11, RNA binding domain
987898857Histidine phosphatase superfamily (branch 1)
11112118Thymidylate synthase
444454530ATP synthase alpha/beta chain, C terminal domain
544464431Calponin homology (CH) domain
555555535Glutamine amidotransferases class-II
222223316Ribosomal protein S15
215131114Thaumatin family
11111117Fructose-1-6-bisphosphatase, N-terminal domain
11111117Ribonucleotide reductase, all-alpha domain
222232215Ribosomal protein S2
222222214SRF-type transcription factor (DNA-binding and dimerisation domain)
81099910964GATA zinc finger
23273037452526213Amino acid permease
98139119968Prolyl oligopeptidase family
11111117Ribosomal protein L30p/L7e
12172117221212113Histidine phosphatase superfamily (branch 2)
1111116Respiratory-chain NADH dehydrogenase, 30 Kd subunit
445454430Aconitase family (aconitate hydratase)
213111110Glycosyl hydrolase family 10
11111117Glycosyl hydrolases family 17
223222215Ribosomal protein S5, N-terminal domain
11111117Nucleoside diphosphate kinase
1211117Tetraspanin family
222222214Ribosomal protein S10p/S20e
535462328Arrestin (or S-antigen), N-terminal domain
21112119Phosphoglucose isomerase
11111117Carbohydrate phosphorylase
11111117SecY translocase
11111117Respiratory-chain NADH dehydrogenase, 49 Kd subunit
222222214Ribosomal protein L6
555875540Polyprenyl synthetase
222222214Hexokinase
61081012101066Dynamin family
11121118Transcription factor TFIID (or TATA-binding protein, TBP)
234434424Rieske [2Fe-2S] domain
1124Proton-conducting membrane transporter
789867752Biotin-requiring enzyme
21112119Phosphofructokinase
222222214Ribosomal protein S17
11111117Hydroxymethylglutaryl-coenzyme A reductase
223244421FGGY family of carbohydrate kinases, N-terminal domain
7886139960Enoyl-CoA hydratase/isomerase
11Insect cuticle protein
222222214Ribosomal protein S9/S16
322322216Transcription factor TFIIB repeat
879888856Cytidine and deoxycytidylate deaminase zinc-binding region
21111118Molybdopterin oxidoreductase
10671218101376Chromo (CHRromatin Organisation MOdifier) domain
122232214Phosphatidylinositol-specific phospholipase C, Y domain
133232216Phosphatidylinositol-specific phospholipase C, X domain
557674438D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
233222216Malic enzyme, N-terminal domain
111111176-phosphogluconate dehydrogenase, C-terminal domain
1011111515171796Multicopper oxidase
119117119967WW domain
122222213Ribosomal RNA adenine dimethylase
2901823193384781771851,969WD domain, G-beta repeat
443453326Heavy-metal-associated domain
444444428Adenylate kinase
21211119Phosphoglucomutase/phosphomannomutase, C-terminal domain
11111117Ribosomal protein S8
11111117Ribosomal protein S11
666666642LIM domain
11Matrixin
223222215Regulator of chromosome condensation (RCC1) repeat
222222214Ribosomal protein S13/S18
112NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
222353320chorismate binding enzyme
33212221560s Acidic ribosomal protein
544768640Prenyltransferase and squalene oxidase repeat
988777753Protein kinase C terminal domain
11111117Single-strand binding protein family
11211118S-adenosylmethionine synthetase, N-terminal domain
1410101010101074Bromodomain
798886652Acyl-CoA dehydrogenase, C-terminal domain
14151614151414102Ubiquitin carboxyl-terminal hydrolase
11111117Ribosomal protein L36
222221112Ribonuclease T2 family
654444431HSF-type DNA-binding
222232215SRP54-type protein, GTPase domain
11112118Urease alpha-subunit, N-terminal domain
1610810106666Serine carboxypeptidase
888888856Phosphatidylinositol 3- and 4-kinase
223222215Transketolase, thiamine diphosphate binding domain
11111117WHEP-TRS domain
433222218Inositol monophosphatase family
554766639Glutaredoxin
333333321Isocitrate lyase family
11122119Serine hydroxymethyltransferase
222232215Iron-containing alcohol dehydrogenase
222222214Ribosomal protein L10
244454427KOW motif
11211118Ribosomal protein L34
313222215RF-1 domain
334321117Sodium:solute symporter family
21111118Imidazoleglycerol-phosphate dehydratase
1111116DNA polymerase family A
11113119IMP dehydrogenase / GMP reductase domain
11111117Glucose-6-phosphate dehydrogenase, NAD binding domain
7710898857Protein phosphatase 2C
233333320Nucleotidyl transferase
232444423Carbonic anhydrase
11111117Phosphoribulokinase / Uridine kinase family
1381315269993Fatty acid desaturase
667666643MutS domain V
11111117Delta-aminolevulinic acid dehydratase
334543325Arginase family
666666642MCM P-loop domain
111122311Squalene/phytoene synthase
1111998101068FHA domain
11NADH-ubiquinone/plastoquinone oxidoreductase chain 6
25294134473028234AMP-binding enzyme
18121512131619105G-protein alpha subunit
20151616151616114HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
11Cytochrome c oxidase subunit III
135343322His Kinase A (phospho-acceptor) domain
323333320Armadillo/beta-catenin-like repeat
46303326262626213Tetratricopeptide repeat
722222219Ion transport protein
11211118DNA gyrase/topoisomerase IV, subunit A
121010999968BRCA1 C Terminus (BRCT) domain
766666643Glycosyl transferases group 1
344434426Glycosyl transferase family 2
11111117SAM domain (Sterile alpha motif)
334233321linker histone H1 and H5 family
11111117Ribosomal protein L7/L12 C-terminal domain
178ribonuclease
1111116Urease, gamma subunit
333343322CoA-ligase
79149117764Phosphopantetheine attachment site
422332218Formyl transferase
109109109966Metallopeptidase family M24
17161818141515113Leucine Rich Repeat
29323426262323193alpha/beta hydrolase fold
333333321RNA polymerase Rpb2, domain 6
564555535PB1 domain
222222214Staphylococcal nuclease homologue
11111011119972Rab-GTPase-TBC domain
11111117Tudor domain
222222214WH1 domain
333333321Zinc finger, ZZ type
1111116HRDC domain
9899118862CBS domain
222222214Ribosomal protein L13
222222214Ribosomal protein L4/L1 family
11111117Clp protease
454464431S1 RNA binding domain
1111116HIUase/Transthyretin family
455565535AhpC/TSA family
945444434tRNA synthetases class I (W and Y)
1211117UvrD/REP helicase N-terminal domain
444444428Rhodanese-like domain
122132213Universal stress protein family
30273426232223185Acetyltransferase (GNAT) family
11111117SecE/Sec61-gamma subunits of protein translocation complex
131332215C-terminal regulatory domain of Threonine dehydratase
222222214AIR synthase related protein, N-terminal domain
666666642tRNA synthetase class II core domain (G, H, P, S and T)
1315Phage integrase family
223222215Tetrapyrrole (Corrin/Porphyrin) Methylases
12111118Glycosyl transferase family, a/b domain
122222213Class II Aldolase and Adducin N-terminal domain
333343322Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
555455534Fes/CIP4, and EFC/F-BAR homology domain
433343323IQ calmodulin-binding motif
222222214Phosphoinositide 3-kinase family, accessory domain (PIK domain)
444443326Phospholipase D Active site motif
11111117Regulator of G protein signaling domain
445464431GTPase-activator protein for Ras-like GTPase
666666642RasGEF domain
777797751RasGEF N-terminal motif
11Caspase recruitment domain
1213161213131392RhoGAP domain
1412141415131395RhoGEF domain
454444429SPRY domain
334563428RNA polymerase Rpb1, domain 2
11111117Guanylate kinase
334332220Gelsolin repeat
978777752UBA/TS-N domain
18181719161920127PHD-finger
1111116GGL domain
555555535HECT-domain (ubiquitin-transferase)
422222216Helix-hairpin-helix motif
11111117MSP (Major sperm protein) domain
798899959Ribonuclease III domain
222222214Region in Clathrin and VPS
333333321RanBP1 domain
222222214PPIC-type PPIASE domain
412433421Zn-finger in Ran binding protein and others
21252423212524163Zinc finger C-x8-C-x5-C-x3-H type (and similar)
112116B-box zinc finger
444453428Poly(ADP-ribose) polymerase catalytic domain
222222214Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
99607461775152474F-box domain
11111117Elongation factor 1 gamma, conserved domain
1111116Calpain family cysteine protease
222222214Copper fist DNA binding domain
667766644CRAL/TRIO domain
15162112291414121BTB/POZ domain
513110Ricin-type beta-trefoil lectin domain
11111117Inhibitor of Apoptosis domain
222222214Voltage gated chloride channel
13810769659Caspase domain
715431122GDSL-like Lipase/Acylhydrolase
11111117Poly-adenylate binding protein, unique domain
11111117POLO box duplicated region
11NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
11142220161111105ABC transporter transmembrane region
240749Integrase core domain
333433322FAD binding domain
255444428Condensation domain
11111117S-adenosyl-L-homocysteine hydrolase, NAD binding domain
11111117HAMP domain
222222214ribosomal L5P family C-terminus
656655538Insulinase (Peptidase family M16)
555575537Dehydrogenase E1 component
11111117Lumazine binding domain
666666642Elongation factor G C-terminus
444565533HMGL-like
444444428DnaJ central domain
22221110Starch binding domain
222222214Ribosomal protein L1p/L10e family
556585539Cation transporting ATPase, C-terminus
776675543Cation transporter/ATPase, N-terminus
11111117dUTPase
345454429Aconitase C-terminal domain
333343322Amino acid kinase family
11111117N-(5'phosphoribosyl)anthranilate (PRA) isomerase
467674438Acyl transferase domain
11111117Urease beta subunit
222221112Dihydrodipicolinate synthetase family
26252725282424179haloacid dehalogenase-like hydrolase
11211118Glycosyl hydrolases family 2
129111313151386Glycosyl hydrolases family 18
11111117Proliferating cell nuclear antigen, N-terminal domain
21112119Adenylosuccinate synthetase
11111117Asparaginase, N-terminal
223222215Peptidase S24-like
11111117Inorganic pyrophosphatase
344333323Glycosyl hydrolases family 16
122342216Glycosyl hydrolases family 15
13515694456NADH:flavin oxidoreductase / NADH oxidase family
111131193-hydroxyacyl-CoA dehydrogenase, C-terminal domain
454362226Glycosyl hydrolase family 20, catalytic domain
567666642HhH-GPD superfamily base excision DNA repair protein
11112118AIR carboxylase
149127710766GMC oxidoreductase
222222214Asparagine synthase
111618Fungal cellulose binding domain
666666642Septin
11211118EF-1 guanine nucleotide exchange domain
11111117Homoserine dehydrogenase
334442222Flavin-binding monooxygenase-like
333333321tRNA synthetases class I (E and Q), catalytic domain
21111118tRNA synthetases class I (R)
564656840XPG N-terminal domain
981510108969Metallo-beta-lactamase superfamily
112F5/8 type C domain
744444431Choline/Carnitine o-acyltransferase
11111117Putative esterase
1111318Glycosyl hydrolase family 9
11111117Ferrochelatase
322222215Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
11111117Arginosuccinate synthase
11111117Electron transfer flavoprotein FAD-binding domain
334333322RNB domain
214332217Dioxygenase
333453324CNH domain
222221112Diacylglycerol kinase catalytic domain
1312121314111186Dual specificity phosphatase, catalytic domain
11111117MyTH4 domain
333343322P21-Rho-binding domain
1313141312121289PX domain
335333323Ras association (RalGDS/AF-6) domain
344443325UBX domain
557554435VHS domain
11111117Phosphoinositide 3-kinase C2
222222214DAHP synthetase I family
444443326Carbon-nitrogen hydrolase
11Geminivirus Rep catalytic domain
11111117Prephenate dehydratase
555765538Syntaxin
655555536Pumilio-family RNA binding repeat
877787751Histone-like transcription factor (CBF/NF-Y) and archaeal histone
21111118Pterin binding enzyme
11111117ER lumen protein retaining receptor
222222214Glycoprotease family
11111117Histidinol dehydrogenase
333333321impB/mucB/samB family
131121110
11111117Ribosomal L15
11111117Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
11111117Ribosomal prokaryotic L21 protein
11111117Ribosomal L28 family
11111117Ribosomal L29 protein
11111117Ribosomal L39 protein
11113119Ribosomal S17
11111117Ribulose-phosphate 3 epimerase family
11111117Translationally controlled tumour protein
44Glycosyl hydrolase family 7
222222214RNA pseudouridylate synthase
666676643Histone deacetylase domain
21111118POT family
221222213PWWP domain
1513181312101091SET domain
343443324Isochorismatase family
222242216Permease family
11111117Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
91471021131791XPG I-region
11112118Acetokinase family
11211118DNA photolyase
11111117Cation-independent mannose-6-phosphate receptor repeat
11111117Cytosol aminopeptidase family, catalytic domain
111115Sulfatase
111111176,7-dimethyl-8-ribityllumazine synthase
11111117Ribosomal protein S16
333233320Acyl CoA binding protein
9710886654Cullin family
11111117Elongation factor TS
447452228FAD binding domain
447864437O-methyltransferase domain
235443324EamA-like transporter family
222222214
1377777755ThiF family
11111117Ribosomal family S4e
11111117Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
222222214Ammonium Transporter Family
438454533Sulfate permease family
11211118MATH domain
222222214Dehydratase family
335333323Transaldolase/Fructose-6-phosphate aldolase