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PFAM Domains • Microbotryum lychnidis-dioicae p1A1 Lamole
Annotations/GenomesHetpy1Hyabl1Leucr1Mereb1Micld1Rhoto1Spopa1Sporo1TotalAnnotation Description
PFAMs
5,5785,6218,6307,8997,6366,4587,3494,22253,393
2137 transmembrane receptor (rhodopsin family)
3333303733363129262ATPase family associated with various cellular activities (AAA)
2830414332303031265ABC transporter
4444454433ATP synthase alpha/beta family, nucleotide-binding domain
1113EGF-like domain
1414151314131414111Elongation factor Tu GTP binding domain
910810898365Helix-loop-helix DNA-binding domain
8210Hsp20/alpha crystallin family
7799788661Hsp70 protein
8868776959KH domain
11114SH2 domain
2523132218231417155SH3 domain
99101010910774Actin
171731941941396Ankyrin repeat
7777777756ADP-ribosylation factor family
1313153019121512129Eukaryotic aspartyl protease
3334433326Cyclic nucleotide-binding domain
11Cytochrome b(C-terminal)/b6/petD
11Cytochrome b/b6/petB
11111117Cytochrome c
112413113Double-stranded RNA binding motif
161621811541789EF hand
11112174Fe-4S binding domain
11112118Fibronectin type III domain
112Globin
4411185156568Glutathione S-transferase, C-terminal domain
1123221113Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
8848566449Homeodomain
1113Laminin EGF domain
2222222216lactate/malate dehydrogenase, NAD binding domain
5655555541Myosin head (motor domain)
10123029101586120Cytochrome P450
14214810711312610110092929Protein kinase domain
111115151213111199Pyridine nucleotide-disulphide oxidoreductase
2526252829232524205Ras family
1415242515171312135Response regulator receiver domain
221481119RNase H
6466616156565752473RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
11314Reverse transcriptase (RNA-dependent DNA polymerase)
11211219Iron/manganese superoxide dismutases, alpha-hairpin domain
55731666351Subtilase family
2224657531374042336Sugar (and other) transporter
11111213131413693Thioredoxin
5566654441Tubulin/FtsZ family, GTPase domain
43242217von Willebrand factor type A domain
3535187717341526257Zinc finger, C2H2 type
31341041639514180Zinc finger, C3HC4 type (RING finger)
16118910146983Zinc knuckle
5528224129Protein-tyrosine phosphatase
29306710846513731399short chain dehydrogenase
1917315026322731233Zinc-binding dehydrogenase
45710866652Thiolase, N-terminal domain
111111118Beta-ketoacyl synthase, N-terminal domain
44353434302Fe-2S iron-sulfur cluster binding domain
111111219Enolase, C-terminal TIM barrel domain
11Cytochrome C and Quinol oxidase polypeptide I
11Cytochrome C oxidase subunit II, periplasmic domain
8898988664Glutamine amidotransferase class-I
10111010101110981TCP-1/cpn60 chaperonin family
2232222217Glutamine synthetase, catalytic domain
111211119Triosephosphate isomerase
1212141516121210103E1-E2 ATPase
2920252723151622177Core histone H2A/H2B/H3/H4
1111116Copper binding proteins, plastocyanin/azurin family
33414733340Alpha amylase, catalytic domain
3423453125Phorbol esters/diacylglycerol binding domain (C1 domain)
5568867550Bacterial transferase hexapeptide (six repeats)
3343434630tRNA synthetases class I (I, L, M and V)
98109141110879Cyclin, N-terminal domain
9101312788572Carboxylesterase family
4444654435DNA polymerase family B
3334333426ATP synthase subunit C
2222222216Peroxidase
229824330Beta-lactamase
2223223117C-5 cytosine-specific DNA methylase
1817162221211614145Calcineurin-like phosphoesterase
111051211141Cellulase (glycosyl hydrolase family 5)
4444444432tRNA synthetases class II (D, K and N)
3334414440363734299Mitochondrial carrier protein
11recA bacterial DNA recombination protein
1515171815191615130Aminotransferase class I and II
6646563642Phosphoribosyl transferase domain
131311121212121196Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
111111118Phosphoglycerate kinase
2223222217Ribosomal protein S4/S9 N-terminal domain
2223222217Ribosomal protein S12/S23
11Bacterial regulatory helix-turn-helix proteins, AraC family
111111118Chaperonin 10 Kd subunit
1415111614129899C2 domain
2020112313221012131PH domain
910191191311486bZIP transcription factor
1211212717121111122Aldehyde dehydrogenase family
544611119354764723604Fungal Zn(2)-Cys(6) binuclear cluster domain
1718233021231818168Cytochrome b5-like Heme/Steroid binding domain
2121511Oxidoreductase molybdopterin binding domain
7777785553Oxidoreductase NAD-binding domain
2020242324222317173SNF2 family N-terminal domain
2222232217Ribosomal protein S7p/S5e
1717202122192017153Ubiquitin-conjugating enzyme
5566555542Isocitrate/isopropylmalate dehydrogenase
2222222216Ribosomal Proteins L2, RNA binding domain
2222232217Hsp90 protein
2212322317Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
111111118Dihydrofolate reductase
11Chitin recognition protein
453523325Cysteine-rich secretory protein family
111111118Ribosomal protein S3, C-terminal domain
11Cupin
111216Annexin
2215Eukaryotic-type carbonic anhydrase
33333444272-oxoacid dehydrogenases acyltransferase (catalytic domain)
1142122114Catalase
111111118Disintegrin
31116UDP-glucoronosyl and UDP-glucosyl transferase
6679555548Aminotransferase class-III
2322122216Ribosomal protein S19
111121119DNA gyrase B
1134333321Thiamine pyrophosphate enzyme, central domain
3333533326Lyase
2212222215Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
112Sodium:neurotransmitter symporter family
2211111110Adenylate and Guanylate cyclase catalytic domain
111111118ATP synthase delta (OSCP) subunit
111111118Orotidine 5'-phosphate decarboxylase / HUMPS family
111112119Indole-3-glycerol phosphate synthase
112111119Aromatic amino acid lyase
111111118Pyruvate kinase, barrel domain
9999888868Kinesin motor domain
2422232726292722200DnaJ domain
1415131414151414113Proteasome subunit
3385465539Major intrinsic protein
111111118ATP synthase
11114Glycosyl hydrolase family 1
1111111183'5'-cyclic nucleotide phosphodiesterase
121111119Profilin
1121212111Ribosomal protein L22p/L17e
2222223217Ribosomal protein L14p/L23e
1010191411221611113Ubiquitin family
4534544231Cofilin/tropomyosin-type actin-binding protein
222222221614-3-3 protein
1134232218Alkaline phosphatase
111111118Zinc carboxypeptidase
1010313618171513150Aldo/keto reductase family
14128339116699Myb-like DNA-binding domain
4433422123Forkhead domain
111115Glycosyl hydrolases family 32 N-terminal domain
1121212111Ribosomal protein L16p/L10e
2222222115Ribosomal protein S14p/S29e
3335433327FKBP-type peptidyl-prolyl cis-trans isomerase
111111118Glutathione peroxidase
111216
6634343332Flavodoxin
111111118Calreticulin family
5577756345Aminotransferase class-V
1122222214Ribonucleotide reductase, small chain
3940494551444947364DEAD/DEAH box helicase
7071777876767367588Helicase conserved C-terminal domain
111111118EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
2212222215Ribosomal protein L23
111111118Pyridoxal-dependent decarboxylase, C-terminal sheet domain
2211111110Ribosomal protein L5
3355455535Pyridoxal-dependent decarboxylase conserved domain
2232333220Citrate synthase, C-terminal domain
5645555439GHMP kinases N terminal domain
5556766646Biotin carboxylase, N-terminal domain
11111218Tryptophan synthase alpha chain
6679686553Pyridoxal-phosphate dependent enzyme
101010121112131189NUDIX domain
3355344330pfkB family carbohydrate kinase
46111Glycosyl hydrolases family 28
712111Luciferase-like monooxygenase
2222222216Ribosomal protein L3
1122222214Ribosomal protein L11, RNA binding domain
991413101110581Histidine phosphatase superfamily (branch 1)
111112119Thymidylate synthase
4444464434ATP synthase alpha/beta chain, C terminal domain
4443444431Calponin homology (CH) domain
4424542429Glutamine amidotransferases class-II
3232221217Ribosomal protein S15
2242453224'Cold-shock' DNA-binding domain
336845433Thaumatin family
111111118Fructose-1-6-bisphosphatase, N-terminal domain
111111118Ribonucleotide reductase, all-alpha domain
2232322218Ribosomal protein S2
4444444331SRF-type transcription factor (DNA-binding and dimerisation domain)
101112991212782GATA zinc finger
21232437821916159Amino acid permease
5575658344Prolyl oligopeptidase family
1121212111Ribosomal protein L30p/L7e
4477976448Histidine phosphatase superfamily (branch 2)
111111118Respiratory-chain NADH dehydrogenase, 30 Kd subunit
4456444435Aconitase family (aconitate hydratase)
223119Glycosyl hydrolases family 17
2222222216Ribosomal protein S5, N-terminal domain
2222122215Nucleoside diphosphate kinase
11Tetraspanin family
1121112211Ribosomal protein S10p/S20e
4435344128Arrestin (or S-antigen), N-terminal domain
111111118Phosphoglucose isomerase
111111118Carbohydrate phosphorylase
111111118SecY translocase
111111118Respiratory-chain NADH dehydrogenase, 49 Kd subunit
2222222216Ribosomal protein L6
3333433325Polyprenyl synthetase
2322322218Hexokinase
5443435432Dynamin family
111111118Transcription factor TFIID (or TATA-binding protein, TBP)
2244242222Rieske [2Fe-2S] domain
412119Phytochrome region
7776897859Biotin-requiring enzyme
111111118Phosphofructokinase
2222212114Ribosomal protein S17
111111118Hydroxymethylglutaryl-coenzyme A reductase
2243222219FGGY family of carbohydrate kinases, N-terminal domain
112Sodium:dicarboxylate symporter family
77912877764Enoyl-CoA hydratase/isomerase
2222222115Ribosomal protein S9/S16
2223222217Transcription factor TFIIB repeat
661071097459Cytidine and deoxycytidylate deaminase zinc-binding region
111112119Molybdopterin oxidoreductase
5248686342Chromo (CHRromatin Organisation MOdifier) domain
11112118Phosphatidylinositol-specific phospholipase C, Y domain
221131111Phosphatidylinositol-specific phospholipase C, X domain
671314646561D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
2222222216Malic enzyme, N-terminal domain
1111111186-phosphogluconate dehydrogenase, C-terminal domain
3355441126Multicopper oxidase
22Granulin
66911686860WW domain
1122112212Ribosomal RNA adenine dimethylase
979710610811310710295825WD domain, G-beta repeat
4423322222Heavy-metal-associated domain
3323333323Adenylate kinase
1132323217Phosphoglucomutase/phosphomannomutase, C-terminal domain
1122122213Ribosomal protein S8
111111118Ribosomal protein S11
5436766340LIM domain
2243637229Regulator of chromosome condensation (RCC1) repeat
2322222217Ribosomal protein S13/S18
2222222216chorismate binding enzyme
333333332460s Acidic ribosomal protein
7735343436Prenyltransferase and squalene oxidase repeat
7767474446Protein kinase C terminal domain
2211111110Single-strand binding protein family
111121119S-adenosylmethionine synthetase, N-terminal domain
9999989769Bromodomain
8811161212101390Acyl-CoA dehydrogenase, C-terminal domain
1515151714161612120Ubiquitin carboxyl-terminal hydrolase
11111117Ribosomal protein L36
113211110Ribonuclease T2 family
761514101010476HSF-type DNA-binding
2212222215SRP54-type protein, GTPase domain
111121119Urease alpha-subunit, N-terminal domain
5546845441Serine carboxypeptidase
7788988762Phosphatidylinositol 3- and 4-kinase
1123111111Transketolase, thiamine diphosphate binding domain
1111222212WHEP-TRS domain
2233233321Inositol monophosphatase family
4446554234Glutaredoxin
2324222219Isocitrate lyase family
111111118Serine hydroxymethyltransferase
1122132214Iron-containing alcohol dehydrogenase
2221222215Ribosomal protein L10
6535354738KOW motif
11114Ribosomal protein L34
111115Ribosomal protein L33
2233323119RF-1 domain
45223218Sodium:solute symporter family
111121119Imidazoleglycerol-phosphate dehydratase
111111118DNA polymerase family A
121111119IMP dehydrogenase / GMP reductase domain
111111118Glucose-6-phosphate dehydrogenase, NAD binding domain
6656766547Protein phosphatase 2C
2232322218Nucleotidyl transferase
1134132217Carbonic anhydrase
1121112110Phosphoribulokinase / Uridine kinase family
5589555547Fatty acid desaturase
6656667749MutS domain V
111111118Delta-aminolevulinic acid dehydratase
2243122218Arginase family
6666666648MCM P-loop domain
1111323214Squalene/phytoene synthase
87681069559FHA domain
11NADH-ubiquinone/plastoquinone oxidoreductase chain 6
1212252924161514147AMP-binding enzyme
11131111779877G-protein alpha subunit
131461110911781HMG (high mobility group) box
111121221014109108His Kinase A (phospho-acceptor) domain
333233219Armadillo/beta-catenin-like repeat
2324102311311225159Tetratricopeptide repeat
1125133319Ion transport protein
111121119DNA gyrase/topoisomerase IV, subunit A
89997108565BRCA1 C Terminus (BRCT) domain
55611988456Glycosyl transferases group 1
33410645439Glycosyl transferase family 2
11111128SAM domain (Sterile alpha motif)
1212219linker histone H1 and H5 family
111111118Ribosomal protein L7/L12 C-terminal domain
111121119Urease, gamma subunit
3335333326CoA-ligase
2254333325Phosphopantetheine attachment site
2222322116Formyl transferase
991010101010775Metallopeptidase family M24
161811721631386Leucine Rich Repeat
151574162577123alpha/beta hydrolase fold
3333333324RNA polymerase Rpb2, domain 6
3275565336PB1 domain
3322222117Staphylococcal nuclease homologue
99121113912782Rab-GTPase-TBC domain
111121119Tudor domain
111111118WH1 domain
3233332221Zinc finger, ZZ type
112152113HRDC domain
7769785453CBS domain
2212222215Ribosomal protein L13
2222222115Ribosomal protein L4/L1 family
11111117Clp protease
4424444329S1 RNA binding domain
111111118HIUase/Transthyretin family
3334233324AhpC/TSA family
4444444432tRNA synthetases class I (W and Y)
2223112114UvrD/REP helicase N-terminal domain
55104939247Rhodanese-like domain
2125222117Universal stress protein family
1514202612221518142Acetyltransferase (GNAT) family
111111118SecE/Sec61-gamma subunits of protein translocation complex
111111118C-terminal regulatory domain of Threonine dehydratase
2222222216AIR synthase related protein, N-terminal domain
6656565645tRNA synthetase class II core domain (G, H, P, S and T)
2322222217Tetrapyrrole (Corrin/Porphyrin) Methylases
111111118Glycosyl transferase family, a/b domain
11114PDZ domain
3347233328Class II Aldolase and Adducin N-terminal domain
11121129Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
3344524227Fes/CIP4, and EFC/F-BAR homology domain
6713152631IQ calmodulin-binding motif
2232222217Phosphoinositide 3-kinase family, accessory domain (PIK domain)
3323242423Phospholipase D Active site motif
1141415118Regulator of G protein signaling domain
4444543331GTPase-activator protein for Ras-like GTPase
4555644336RasGEF domain
4555544133RasGEF N-terminal motif
1213131512141211102RhoGAP domain
891212141112886RhoGEF domain
3333332222SPRY domain
3333333324RNA polymerase Rpb1, domain 2
111111118Guanylate kinase
4455333330Gelsolin repeat
7969597355UBA/TS-N domain
1815151814191411124PHD-finger
111115GGL domain
6667466647HECT-domain (ubiquitin-transferase)
22116Helix-hairpin-helix motif
112BRCA2 repeat
111111118MSP (Major sperm protein) domain
3328176333Ribonuclease III domain
2242325222Region in Clathrin and VPS
3332233322RanBP1 domain
2212121213PPIC-type PPIASE domain
1113Zn-finger in Ran binding protein and others
141481491481091Zinc finger C-x8-C-x5-C-x3-H type (and similar)
221211110Poly(ADP-ribose) polymerase catalytic domain
114221112Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
342822583592478306F-box domain
1121121110Elongation factor 1 gamma, conserved domain
1121117Calpain family cysteine protease
3332122218Copper fist DNA binding domain
8857855551CRAL/TRIO domain
65186554150BTB/POZ domain
1111116Inhibitor of Apoptosis domain
2233433323Voltage gated chloride channel
2232111113Caspase domain
43614753143GDSL-like Lipase/Acylhydrolase
112111119Poly-adenylate binding protein, unique domain
1111116POLO box duplicated region
910171816121311106ABC transporter transmembrane region
156Integrase core domain
3333333223FAD binding domain
2122222215Condensation domain
111111118S-adenosyl-L-homocysteine hydrolase, NAD binding domain
111121119HAMP domain
2222222216ribosomal L5P family C-terminus
5568557647Insulinase (Peptidase family M16)
3345444431Dehydrogenase E1 component
111111118Lumazine binding domain
5555555540Elongation factor G C-terminus
4545544435HMGL-like
4444344431DnaJ central domain
112Sulfotransferase domain
1112117Starch binding domain
2232323219Ribosomal protein L1p/L10e family
5575864444Cation transporting ATPase, C-terminus
66610975655Cation transporter/ATPase, N-terminus
111111118dUTPase
4456444435Aconitase C-terminal domain
3333433224Amino acid kinase family
111111118N-(5'phosphoribosyl)anthranilate (PRA) isomerase
1222222215Acyl transferase domain
111121119Urease beta subunit
1124111112Dihydrodipicolinate synthetase family
2525102913271022161haloacid dehalogenase-like hydrolase
111115Glycosyl hydrolases family 2
44712967756Glycosyl hydrolases family 18
1212111110Proliferating cell nuclear antigen, N-terminal domain
1113Translation initiation factor IF-3, C-terminal domain
111111118Adenylosuccinate synthetase
1122133316Asparaginase, N-terminal
2222333219Peptidase S24-like
111111118Inorganic pyrophosphatase
331272410243Glycosyl hydrolases family 16
2224323321Glycosyl hydrolases family 15
111014455343NADH:flavin oxidoreductase / NADH oxidase family
22242222183-hydroxyacyl-CoA dehydrogenase, C-terminal domain
23221111Glycosyl hydrolase family 20, catalytic domain
2255435329HhH-GPD superfamily base excision DNA repair protein
111111118AIR carboxylase
12121313545367GMC oxidoreductase
2222222115Asparagine synthase
2334416Fungal cellulose binding domain
5555644438Septin
2211111110EF-1 guanine nucleotide exchange domain
11111218Homoserine dehydrogenase
116121214Flavin-binding monooxygenase-like
11LPXTG cell wall anchor motif
3333333324tRNA synthetases class I (E and Q), catalytic domain
2211111110tRNA synthetases class I (R)
5565556239XPG N-terminal domain
663103106549Metallo-beta-lactamase superfamily
2715318F5/8 type C domain
4444444432Choline/Carnitine o-acyltransferase
111111118Putative esterase
111111118Ferrochelatase
2212222215Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
111111118Arginosuccinate synthase
111111118Electron transfer flavoprotein FAD-binding domain
3343433326RNB domain
1164243324Dioxygenase
2242423221CNH domain
223222215Diacylglycerol kinase catalytic domain
6676856448Dual specificity phosphatase, catalytic domain
44
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