PFAM Domains • Gigaspora rosea v1.0
Annotations/GenomesGigro1Gloin1Lacbi2Morel2Mucci2Phybl2Rhice1_1Rhidi1Rhiir2_1RhiirA1_1RhiirA4RhiirA5RhiirB3RhiirC2Rhimi1_1Tubme1TotalAnnotation Description
PFAMs
18,49712,1048,65610,1609,5849,21613,29314,19915,93111,38410,45010,42910,48710,4088,6265,899179,323
815121443341557 transmembrane receptor (rhodopsin family)
117 transmembrane receptor (Secretin family)
5433157 transmembrane sweet-taste receptor of 3 GCPR
57513947444853464953485251483845769ATPase family associated with various cellular activities (AAA)
64424994524847444162424045403435779ABC transporter
5446912444545557487ATP synthase alpha/beta family, nucleotide-binding domain
31217EGF-like domain
22141619172120161618141617151816275Elongation factor Tu GTP binding domain
2111202637351212131212121212398294Helix-loop-helix DNA-binding domain
17111057141515141114131173167Hsp20/alpha crystallin family
2637151411123853633435373737109468Hsp70 protein
1126813141220283232282529291311331KH domain
213Methyl-accepting chemotaxis protein (MCP) signalling domain
1111111111111SH2 domain
18284039413723202131312930334820489SH3 domain
11101511111110101010101010101111171Actin
6319559423746830292930304517498Ankyrin repeat
11PAN domain
9892112109999999997157ADP-ribosylation factor family
10892438273377812119109203335Eukaryotic aspartyl protease
443577444544447474Cyclic nucleotide-binding domain
11Cystatin domain
1111116Cytochrome b(C-terminal)/b6/petD
12126Cytochrome b/b6/petB
111311111111112119Cytochrome c
871131178891089713101Double-stranded RNA binding motif
1291843433533330323131303317382EF hand
121111111112144Fe-4S binding domain
1111111111111215Fibronectin type III domain
22127Globin
212313141371430293337333028118344Glutathione S-transferase, C-terminal domain
425233222322223241Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
6910122728776991099294191Homeodomain
55Kazal-type serine protease inhibitor domain
1111111119Laminin EGF domain
332555333343333253lactate/malate dehydrogenase, NAD binding domain
6577171655555555166120Myosin head (motor domain)
3461918630415411416320220120620919719035262,291Cytochrome P450
7941,009217202237220589763931603519539582516210938,024Protein kinase domain
12814111816999999991510176Pyridine nucleotide-disulphide oxidoreductase
69295341605428313030292830295125617Ras family
13017720151813131319141414141712350Response regulator receiver domain
17368522220347881109921004608RNase H
948871888897938789103981021099796621,462RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
117312Reverse transcriptase (RNA-dependent DNA polymerase)
314Serpin (serine protease inhibitor)
731532334434433254Copper/zinc superoxide dismutase (SODC)
113221222222221229Iron/manganese superoxide dismutases, alpha-hairpin domain
152252216241524222623252225157308Subtilase family
18721144728978677672218232Sugar (and other) transporter
128101915131211111091099168182Thioredoxin
121111119Trefoil (P-type) domain
20554211565663271Trypsin
6666895667566686102Tubulin/FtsZ family, GTPase domain
116631223252623207153von Willebrand factor type A domain
2391631051402033024359810210811010887411,368Zinc finger, C2H2 type
5576669645543458566059646036720Zinc finger, C3HC4 type (RING finger)
3256341845701821227583948154239735Zinc knuckle
232365444333335255Protein-tyrosine phosphatase
69414952453343414857454342422745722short chain dehydrogenase
19223130292314192125222221212314356Zinc-binding dehydrogenase
8546105655644445485Thiolase, N-terminal domain
1115232121221232444Beta-ketoacyl synthase, N-terminal domain
6477442224444443652Fe-2S iron-sulfur cluster binding domain
33Papain family cysteine protease
1211222111111112131Enolase, C-terminal TIM barrel domain
552223513111435Cytochrome C and Quinol oxidase polypeptide I
11111112110Cytochrome C oxidase subunit II, periplasmic domain
88131091088810889897141Glutamine amidotransferase class-I
10101312111510101010101010101112174TCP-1/cpn60 chaperonin family
11111117ATP synthase A chain
557556555556555382Glutamine synthetase, catalytic domain
111211111211111118Triosephosphate isomerase
30242035302625333125232421242615412E1-E2 ATPase
1621241414202123222123212222149307Core histone H2A/H2B/H3/H4
437Bacterial regulatory helix-turn-helix protein, lysR family
4232422223329Copper binding proteins, plastocyanin/azurin family
239311222322221744Alpha amylase, catalytic domain
2568475555545511284Phorbol esters/diacylglycerol binding domain (C1 domain)
98468568710978888119Bacterial transferase hexapeptide (six repeats)
610354477996128644104tRNA synthetases class I (I, L, M and V)
10714151818111091010101110207190Cyclin, N-terminal domain
2153031333322221375Carboxylesterase family
75254554485433232528284744412DNA polymerase family B
444654344333334461ATP synthase subunit C
112Legume lectin domain
11Sigma-70 factor, region 1.2
223142222222223134Peroxidase
822181222422221151Beta-lactamase
764324644465451368C-5 cytosine-specific DNA methylase
12111231111116NADH dehydrogenase
31303335373425292928273227283321479Calcineurin-like phosphoesterase
429634433333334360Cellulase (glycosyl hydrolase family 5)
675666866666666698tRNA synthetases class II (D, K and N)
40364162635438363737374037365234680Mitochondrial carrier protein
11recA bacterial DNA recombination protein
13111217202012111117111111111810216Aminotransferase class I and II
5108813115551010111110107139Phosphoribosyl transferase domain
112Sigma-54 interaction domain
1210131415141010109101011101610184Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
211121111211111119Phosphoglycerate kinase
323433222222223239Ribosomal protein S4/S9 N-terminal domain
222344322222224240Ribosomal protein S12/S23
314Bacterial regulatory helix-turn-helix proteins, AraC family
111122111111111118Chaperonin 10 Kd subunit
21271831232221242225242727242012368C2 domain
24292432444820211929292827315318476PH domain
105715281913161376777269195bZIP transcription factor
22121516151215121222131212121210224Aldehyde dehydrogenase family
97207340464730212029262526305256638Fungal Zn(2)-Cys(6) binuclear cluster domain
48292328413927263129303031273719495Cytochrome b5-like Heme/Steroid binding domain
233421222222221234Oxidoreductase molybdopterin binding domain
171481316131415151415151614139221Oxidoreductase NAD-binding domain
15192222202016171620181820202219304SNF2 family N-terminal domain
223243222222223237Ribosomal protein S7p/S5e
32542325222035475551586551532221634Ubiquitin-conjugating enzyme
766788555755557596Isocitrate/isopropylmalate dehydrogenase
232354223333334247Ribosomal Proteins L2, RNA binding domain
11Chitinase class I
1322344222222224149Hsp90 protein
222336222322222239Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
111122111111112119Dihydrofolate reductase
211111111313Chitin recognition protein
7391161233433332265Cysteine-rich secretory protein family
211154322111113130Ribosomal protein S3, C-terminal domain
112Cupin
2226Annexin
238233333333342Eukaryotic-type carbonic anhydrase
81211Bacterial regulatory proteins, luxR family
3335643333333343552-oxoacid dehydrogenases acyltransferase (catalytic domain)
13423316Catalase
111432111111112123Disintegrin
471810116212721222524237262UDP-glucoronosyl and UDP-glucosyl transferase
446466333545435368Aminotransferase class-III
224344222222223240Ribosomal protein S19
531111622322221135DNA gyrase B
233163333333333449Thiamine pyrophosphate enzyme, central domain
334544333533333456Lyase
233433333433333248Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
13221211Ferritin-like domain
111222111111112120Adenylate and Guanylate cyclase catalytic domain
111211111111111117ATP synthase delta (OSCP) subunit
121111111111111117Orotidine 5'-phosphate decarboxylase / HUMPS family
112111111121311120Indole-3-glycerol phosphate synthase
325Aromatic amino acid lyase
111333111211113125Pyruvate kinase, barrel domain
22301015282017222422242221232810338Kinesin motor domain
37373633393441333736363535353726567DnaJ domain
14151414141414151516161516171414237Proteasome subunit
337722333433331252Major intrinsic protein
111222111111111119ATP synthase
22Glycosyl hydrolase family 1
2213862222222261453'5'-cyclic nucleotide phosphodiesterase
111115Protease inhibitor/seed storage/LTP family
111211111111112118Profilin
331345222222224241Ribosomal protein L22p/L17e
322333212222223236Ribosomal protein L14p/L23e
54732131222351647172797473722112813Ubiquitin family
855764766666666494Cofilin/tropomyosin-type actin-binding protein
22143322222222433814-3-3 protein
122443222222223338Alkaline phosphatase
15118Zinc carboxypeptidase
3748241726202843525252535045188573Aldo/keto reductase family
21511438232026292952585753553316575Myb-like DNA-binding domain
55571010455554556490Forkhead domain
112Glycosyl hydrolases family 32 N-terminal domain
211111322111111121Ribosomal protein L16p/L10e
222244222223223238Ribosomal protein S14p/S29e
326966222222225457FKBP-type peptidyl-prolyl cis-trans isomerase
111212111111112119Glutathione peroxidase
22353222224231
4556151355566666114108Flavodoxin
11Tropomyosin
221512223222221132Calreticulin family
183211429Common central domain of tyrosinase
112Thymidine kinase
776117577710788755114Aminotransferase class-V
11Gram-negative porin
311231211111111122Ribonucleotide reductase, small chain
62568056484758565155535356504735863DEAD/DEAH box helicase
9586115918174868188908290848077651,365Helicase conserved C-terminal domain
231111132322221128EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
522343222222223240Ribosomal protein L23
121411222222321129Pyridoxal-dependent decarboxylase, C-terminal sheet domain
11133511111111426Ribosomal protein L5
1044545444464443473Pyridoxal-dependent decarboxylase conserved domain
323212333242221338Citrate synthase, C-terminal domain
666666666666666595GHMP kinases N terminal domain
776811117778787782118Biotin carboxylase, N-terminal domain
111111111111111217Tryptophan synthase alpha chain
87791098778777799126Pyridoxal-phosphate dependent enzyme
11114'Paired box' domain
84141417231613151421151719142011327NUDIX domain
665476766866666394pfkB family carbohydrate kinase
61297227Glycosyl hydrolases family 28
222243322222223237Ribosomal protein L3
222345222222224240Ribosomal protein L11, RNA binding domain
6107811111010101010101091012154Histidine phosphatase superfamily (branch 1)
11Rubredoxin
11Chloramphenicol acetyltransferase
311111111211111422Thymidylate synthase
11Gamma-thionin family
11Lipoxygenase
5446912444545557487ATP synthase alpha/beta chain, C terminal domain
6551312985577777126121Calponin homology (CH) domain
2114Bacterial dnaA protein
48510126644666666499Glutamine amidotransferases class-II
722232222322223240Ribosomal protein S15
642211121221126'Cold-shock' DNA-binding domain
345416Thaumatin family
111111111111111116Fructose-1-6-bisphosphatase, N-terminal domain
321342332321223137Ribonucleotide reductase, all-alpha domain
322344322222223240Ribosomal protein S2
4234107233343339265SRF-type transcription factor (DNA-binding and dimerisation domain)
2124122436352919202225232724398388GATA zinc finger
62337211911121010101816193Amino acid permease
11Bacterial regulatory proteins, crp family
66810668786666666107Prolyl oligopeptidase family
221255222222224239Ribosomal protein L30p/L7e
16681152455555564496Histidine phosphatase superfamily (branch 2)
211111111111111117Respiratory-chain NADH dehydrogenase, 30 Kd subunit
448665444444445474Aconitase family (aconitate hydratase)
112Glycosyl hydrolase family 10
35313318Glycosyl hydrolases family 17
212345222222223238Ribosomal protein S5, N-terminal domain
212264111211115132Nucleoside diphosphate kinase
22346553212122343Tetraspanin family
22Galactoside-binding lectin
322233222221223235Ribosomal protein S10p/S20e
201581222222325271717171717203282Arrestin (or S-antigen), N-terminal domain
111111111111111116Phosphoglucose isomerase
12112111111112118Carbohydrate phosphorylase
111122111211112120SecY translocase
22Pili and flagellar-assembly chaperone, PapD N-terminal domain
115111111111111120Respiratory-chain NADH dehydrogenase, 49 Kd subunit
222434222222223238Ribosomal protein L6
538354333433335361Polyprenyl synthetase
2226117122222228255Hexokinase
116811781112138888874138Dynamin family
1121111111111115Biopterin-dependent aromatic amino acid hydroxylase
112122111121111120Transcription factor TFIID (or TATA-binding protein, TBP)
255755323555554470Rieske [2Fe-2S] domain
11Bacterial regulatory proteins, lacI family
22Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
343124333329Proton-conducting membrane transporter
67810121088898988104133Biotin-requiring enzyme
111122111211112120Phosphofructokinase
212322222322222132Ribosomal protein S17
412131222111112126Hydroxymethylglutaryl-coenzyme A reductase
222366232222226347FGGY family of carbohydrate kinases, N-terminal domain
1142657645555Hemocyanin, copper containing domain
12115Sodium:dicarboxylate symporter family
4149MerR family regulatory protein
12981014119981211101111126163Enoyl-CoA hydratase/isomerase
222344222222224239Ribosomal protein S9/S16
433533333333332249Transcription factor TFIIB repeat
857694555655556591Cytidine and deoxycytidylate deaminase zinc-binding region
131312111111111121Molybdopterin oxidoreductase
188211692211881413151211183207Chromo (CHRromatin Organisation MOdifier) domain
214111111111117Phosphatidylinositol-specific phospholipase C, Y domain
214111111111319Phosphatidylinositol-specific phospholipase C, X domain
334555323423345660D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
216254111211115236Malic enzyme, N-terminal domain
213PEP-utilising enzyme, mobile domain
156Bacterial regulatory proteins, gntR family
1211321132122121266-phosphogluconate dehydrogenase, C-terminal domain
2481365510812131114111235160Multicopper oxidase
1414S-layer homology domain
1111116Granulin
9