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PFAM Domains • Phycomyces blakesleeanus L51 v1.0
Annotations/GenomesPhybl2Phybl_L51_1Phybla1PnitS607_1PnitS608_1PnitS609_1Spifus1TotalAnnotation Description
PFAMs
9,21611,24310,97210,86311,13211,0879,37173,884
1111157 transmembrane receptor (Secretin family)
3231223167 transmembrane sweet-taste receptor of 3 GCPR
48474643454642317ATPase family associated with various cellular activities (AAA)
48494845464528309ABC transporter
121212288862ATP synthase alpha/beta family, nucleotide-binding domain
21171718171819127Elongation factor Tu GTP binding domain
35403836404033262Helix-loop-helix DNA-binding domain
12282829313313174Hsp70 protein
1212121010101076KH domain
11SH2 domain
37333235333531236SH3 domain
1111121112111583Actin
371391315139109Ankyrin repeat
1011111111111176ADP-ribosylation factor family
33333433353621225Eukaryotic aspartyl protease
776777546Cyclic nucleotide-binding domain
11111117Cytochrome c
111222110Double-stranded RNA binding motif
3533222350EF hand
114Fe-4S binding domain
11Fibronectin type III domain
2114Globin
7887651051Glutathione S-transferase, C-terminal domain
333333220Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
28212120212116148Homeodomain
555444330lactate/malate dehydrogenase, NAD binding domain
16151516151614107Myosin head (motor domain)
54545244464677373Cytochrome P450
2202302242222292322051,562Protein kinase domain
16161615151411103Pyridine nucleotide-disulphide oxidoreductase
54555454545551377Ras family
18162019182013124Response regulator receiver domain
233112315RNase H
9710710210110110094702RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
33Reverse transcriptase (RNA-dependent DNA polymerase)
222222214Copper/zinc superoxide dismutase (SODC)
11111117Iron/manganese superoxide dismutases, alpha-hairpin domain
24262520212015151Subtilase family
28282827273021189Sugar (and other) transporter
1313121212121185Thioredoxin
222222113Trypsin
9107354341Tubulin/FtsZ family, GTPase domain
203484749524024463Zinc finger, C2H2 type
5576666692Zinc finger, C3HC4 type (RING finger)
7011101615189149Zinc knuckle
588777749Protein-tyrosine phosphatase
33272723272726190short chain dehydrogenase
23232219222221152Zinc-binding dehydrogenase
566766440Thiolase, N-terminal domain
233322217Beta-ketoacyl synthase, N-terminal domain
4111111102Fe-2S iron-sulfur cluster binding domain
222222113Enolase, C-terminal TIM barrel domain
10910111111870Glutamine amidotransferase class-I
15151516161714108TCP-1/cpn60 chaperonin family
665666338Glutamine synthetase, catalytic domain
11111117Triosephosphate isomerase
26383734363531237E1-E2 ATPase
20201814141814118Core histone H2A/H2B/H3/H4
11111117Alpha amylase, catalytic domain
7101091010662Phorbol esters/diacylglycerol binding domain (C1 domain)
544544632Bacterial transferase hexapeptide (six repeats)
466566639tRNA synthetases class I (I, L, M and V)
18111315151612100Cyclin, N-terminal domain
122243418Carboxylesterase family
444444428DNA polymerase family B
444444327ATP synthase subunit C
11111117Legume lectin domain
222222214Peroxidase
444444428C-5 cytosine-specific DNA methylase
34312929323327215Calcineurin-like phosphoesterase
455555332Cellulase (glycosyl hydrolase family 5)
665666641tRNA synthetases class II (D, K and N)
54555354565446372Mitochondrial carrier protein
20191918191912126Aminotransferase class I and II
1155555541Phosphoribosyl transferase domain
1414141214141496Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111116Phosphoglycerate kinase
333332320Ribosomal protein S4/S9 N-terminal domain
444444428Ribosomal protein S12/S23
222222113Chaperonin 10 Kd subunit
22201918182119137C2 domain
48383736393631265PH domain
19272728282923181bZIP transcription factor
1213131213141592Aldehyde dehydrogenase family
47364138353925261Fungal Zn(2)-Cys(6) binuclear cluster domain
39373334343529241Cytochrome b5-like Heme/Steroid binding domain
11111117Oxidoreductase molybdopterin binding domain
1313121213131591Oxidoreductase NAD-binding domain
20242324242522162SNF2 family N-terminal domain
344455429Ribosomal protein S7p/S5e
20202020202118139Ubiquitin-conjugating enzyme
887888552Isocitrate/isopropylmalate dehydrogenase
442444426Ribosomal Proteins L2, RNA binding domain
444544429Hsp90 protein
666855238Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
222222214Dihydrofolate reductase
1112229Cysteine-rich secretory protein family
444444327Ribosomal protein S3, C-terminal domain
4444444282-oxoacid dehydrogenases acyltransferase (catalytic domain)
222222113Catalase
222212213Disintegrin
133333218UDP-glucoronosyl and UDP-glucosyl transferase
656666540Aminotransferase class-III
444444428Ribosomal protein S19
11111117DNA gyrase B
333333220Thiamine pyrophosphate enzyme, central domain
444444428Lyase
333333220Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
222222214Ferritin-like domain
232222215Adenylate and Guanylate cyclase catalytic domain
11111117ATP synthase delta (OSCP) subunit
1111116Orotidine 5'-phosphate decarboxylase / HUMPS family
11111117Indole-3-glycerol phosphate synthase
333233118Pyruvate kinase, barrel domain
20232223222233165Kinesin motor domain
34373737393930253DnaJ domain
1414141414141498Proteasome subunit
222222113Major intrinsic protein
221221212ATP synthase
6666665413'5'-cyclic nucleotide phosphodiesterase
11111117Profilin
555522529Ribosomal protein L22p/L17e
333333321Ribosomal protein L14p/L23e
23212022232215146Ubiquitin family
477787646Cofilin/tropomyosin-type actin-binding protein
33333332114-3-3 protein
333333422Alkaline phosphatase
20211921212212136Aldo/keto reductase family
20212022232318147Myb-like DNA-binding domain
101110111111973Forkhead domain
1111116Glycosyl hydrolases family 32 N-terminal domain
144444425Ribosomal protein L16p/L10e
444433325Ribosomal protein S14p/S29e
665566640FKBP-type peptidyl-prolyl cis-trans isomerase
222222113Glutathione peroxidase
33
13108910101272Flavodoxin
222212112Calreticulin family
566566539Aminotransferase class-V
11111117Ribonucleotide reductase, small chain
47585550555855378DEAD/DEAH box helicase
74878579858386579Helicase conserved C-terminal domain
11111117EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
333444425Ribosomal protein L23
1111116Pyridoxal-dependent decarboxylase, C-terminal sheet domain
554444430Ribosomal protein L5
555555232Pyridoxal-dependent decarboxylase conserved domain
233333118Citrate synthase, C-terminal domain
666666642GHMP kinases N terminal domain
111011101111670Biotin carboxylase, N-terminal domain
11111117Tryptophan synthase alpha chain
999999862Pyridoxal-phosphate dependent enzyme
112'Paired box' domain
16171716171818119NUDIX domain
655555536pfkB family carbohydrate kinase
99988851Glycosyl hydrolases family 28
333333321Ribosomal protein L3
554555433Ribosomal protein L11, RNA binding domain
11101091010868Histidine phosphatase superfamily (branch 1)
11111117Thymidylate synthase
121212277860ATP synthase alpha/beta chain, C terminal domain
913151211121486Calponin homology (CH) domain
644444228Glutamine amidotransferases class-II
222222214Ribosomal protein S15
22222111'Cold-shock' DNA-binding domain
555554433Thaumatin family
11111117Fructose-1-6-bisphosphatase, N-terminal domain
222222214Ribonucleotide reductase, all-alpha domain
444443427Ribosomal protein S2
787888450SRF-type transcription factor (DNA-binding and dimerisation domain)
35403939394032264GATA zinc finger
1977877863Amino acid permease
677656744Prolyl oligopeptidase family
566777644Ribosomal protein L30p/L7e
222222214Histidine phosphatase superfamily (branch 2)
11111117Respiratory-chain NADH dehydrogenase, 30 Kd subunit
555555434Aconitase family (aconitate hydratase)
133222215Glycosyl hydrolases family 17
555534330Ribosomal protein S5, N-terminal domain
456554231Nucleoside diphosphate kinase
553555432Tetraspanin family
332333320Ribosomal protein S10p/S20e
22312729303020189Arrestin (or S-antigen), N-terminal domain
11111117Phosphoglucose isomerase
222122112SecY translocase
11111117Respiratory-chain NADH dehydrogenase, 49 Kd subunit
444344326Ribosomal protein L6
444444428Polyprenyl synthetase
788888754Hexokinase
81010101010866Dynamin family
11111117Biopterin-dependent aromatic amino acid hydroxylase
222211111Transcription factor TFIID (or TATA-binding protein, TBP)
555555333Rieske [2Fe-2S] domain
101111101111973Biotin-requiring enzyme
222221213Phosphofructokinase
212222213Ribosomal protein S17
11111117Hydroxymethylglutaryl-coenzyme A reductase
677777546FGGY family of carbohydrate kinases, N-terminal domain
11111117Sodium:dicarboxylate symporter family
1199788557Enoyl-CoA hydratase/isomerase
444444428Ribosomal protein S9/S16
333333220Transcription factor TFIIB repeat
466666539Cytidine and deoxycytidylate deaminase zinc-binding region
222221112Molybdopterin oxidoreductase
22891189976Chromo (CHRromatin Organisation MOdifier) domain
544555230D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
444444327Malic enzyme, N-terminal domain
2222221136-phosphogluconate dehydrogenase, C-terminal domain
555555535Multicopper oxidase
712131414151489WW domain
333233421Ribosomal RNA adenine dimethylase
1621681581641681671561,143WD domain, G-beta repeat
11Calponin family repeat
455544431Heavy-metal-associated domain
566667642Adenylate kinase
233333320Phosphoglucomutase/phosphomannomutase, C-terminal domain
333333321Ribosomal protein S8
333333220Ribosomal protein S11
14151613171514104LIM domain
476766541Regulator of chromosome condensation (RCC1) repeat
233344524Ribosomal protein S13/S18
111115Tau and MAP protein, tubulin-binding repeat
222222214chorismate binding enzyme
77768995360s Acidic ribosomal protein
434444528Prenyltransferase and squalene oxidase repeat
1189789658Protein kinase C terminal domain
11111117Single-strand binding protein family
1113Type II/IV secretion system protein
11111117S-adenosylmethionine synthetase, N-terminal domain
14151717171715112Bromodomain
16161617171712111Acyl-CoA dehydrogenase, C-terminal domain
21191818191817130Ubiquitin carboxyl-terminal hydrolase
11111117Ribosomal protein L36
444333324Ribonuclease T2 family
14151414141514100HSF-type DNA-binding
222222214SRP54-type protein, GTPase domain
222222113Urease alpha-subunit, N-terminal domain
777656341Serine carboxypeptidase
1010810108965Phosphatidylinositol 3- and 4-kinase
222222214Transketolase, thiamine diphosphate binding domain
11111117WHEP-TRS domain
22222313Inositol monophosphatase family
554455533Glutaredoxin
11111117Isocitrate lyase family
222222214Serine hydroxymethyltransferase
11111128Iron-containing alcohol dehydrogenase
233244321Ribosomal protein L10
81110111111668KOW motif
11111117Ribosomal protein L34
1111116Ribosomal protein L33
233333320RF-1 domain
11111128Imidazoleglycerol-phosphate dehydratase
11111117DNA polymerase family A
11111128IMP dehydrogenase / GMP reductase domain
333232117Glucose-6-phosphate dehydrogenase, NAD binding domain
111311111111876Protein phosphatase 2C
455554533Nucleotidyl transferase
222222113Carbonic anhydrase
122222213Phosphoribulokinase / Uridine kinase family
16161615161613108Fatty acid desaturase
666666541MutS domain V
11111117Delta-aminolevulinic acid dehydratase
333233118Arginase family
666466640MCM P-loop domain
455555332Squalene/phytoene synthase
18212020211915134FHA domain
36363436363636250AMP-binding enzyme
1010101010101171G-protein alpha subunit
23262423212121159HMG (high mobility group) box
888888755His Kinase A (phospho-acceptor) domain
1076777650Armadillo/beta-catenin-like repeat
31222121202216153Tetratricopeptide repeat
787778751Ion transport protein
11111117DNA gyrase/topoisomerase IV, subunit A
665776542BRCA1 C Terminus (BRCT) domain
877767648Glycosyl transferases group 1
522222318Glycosyl transferase family 2
386555335SAM domain (Sterile alpha motif)
22222212linker histone H1 and H5 family
11111117Ribosomal protein L7/L12 C-terminal domain
222222113Urease, gamma subunit
333333119CoA-ligase
887999757Phosphopantetheine attachment site
222222214Formyl transferase
1414141414141397Metallopeptidase family M24
33111215171612116Leucine Rich Repeat
2366575658alpha/beta hydrolase fold
333333321RNA polymerase Rpb2, domain 6
1012121112131181PB1 domain
222222214Staphylococcal nuclease homologue
29323229313125209Rab-GTPase-TBC domain
11111128Tudor domain
122222213WH1 domain
565666640Zinc finger, ZZ type
11111218HRDC domain
18171616181715117CBS domain
555655435Ribosomal protein L13
444344427Ribosomal protein L4/L1 family
11111117Clp protease
344545429S1 RNA binding domain
11111117HIUase/Transthyretin family
566666439AhpC/TSA family
443444427tRNA synthetases class I (W and Y)
1111116UvrD/REP helicase N-terminal domain
814151415151293Rhodanese-like domain
121312131413885Universal stress protein family
27211921212114144Acetyltransferase (GNAT) family
222222113SecE/Sec61-gamma subunits of protein translocation complex
11111117C-terminal regulatory domain of Threonine dehydratase
222222214AIR synthase related protein, N-terminal domain
1188788959tRNA synthetase class II core domain (G, H, P, S and T)
333333220SpoU rRNA Methylase family
333332219Tetrapyrrole (Corrin/Porphyrin) Methylases
111115Glycosyl transferase family, a/b domain
1113PDZ domain
222222214Class II Aldolase and Adducin N-terminal domain
22222212Diacylglycerol kinase accessory domain
6109101110763Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
816121314151189Fes/CIP4, and EFC/F-BAR homology domain
888778753IQ calmodulin-binding motif
332332218Phosphoinositide 3-kinase family, accessory domain (PIK domain)
866665441Phospholipase D Active site motif
10191820191912117Regulator of G protein signaling domain
1010111010101071GTPase-activator protein for Ras-like GTPase
18202020202017135RasGEF domain
1010101413141384RasGEF N-terminal motif
29363431333528226RhoGAP domain
28343434343425223RhoGEF domain
101111111111772SPRY domain
333333321RNA polymerase Rpb1, domain 2
11111117Guanylate kinase
888898554Gelsolin repeat
1512121111121083UBA/TS-N domain
26202021232417151PHD-finger
332444323GGL domain
99109991065HECT-domain (ubiquitin-transferase)
11111117Helix-hairpin-helix motif
243333220MSP (Major sperm protein) domain
21111118Ribonuclease III domain
266666537Region in Clathrin and VPS
222222214RanBP1 domain
222222214PPIC-type PPIASE domain
455435531Zn-finger in Ran binding protein and others
1414141012131592Zinc finger C-x8-C-x5-C-x3-H type (and similar)
224211113B-box zinc finger
11111117Poly(ADP-ribose) polymerase catalytic domain
1221118Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
20226212923247332F-box domain
222222113Elongation factor 1 gamma, conserved domain
11111117Calpain family cysteine protease
776677444Copper fist DNA binding domain
888989555CRAL/TRIO domain
31363527252519198BTB/POZ domain
811910109764Ricin-type beta-trefoil lectin domain
11111117Inhibitor of Apoptosis domain
221222213Voltage gated chloride channel
566667339Caspase domain
898889757GDSL-like Lipase/Acylhydrolase
576777645Poly-adenylate binding protein, unique domain
111115POLO box duplicated region
24242422232311151ABC transporter transmembrane region
44Integrase core domain
9978991162FAD binding domain
111115Condensation domain
11111117S-adenosyl-L-homocysteine hydrolase, NAD binding domain
333333220HAMP domain
554555433ribosomal L5P family C-terminus
910101010101170Insulinase (Peptidase family M16)
444444428Dehydrogenase E1 component
11111117Lumazine binding domain
777677748Elongation factor G C-terminus
112Viral RNA-dependent RNA polymerase
666666642HMGL-like
665777442DnaJ central domain
366665638Ribosomal protein L1p/L10e family
1315151215151398Cation transporting ATPase, C-terminus
15202119222115133Cation transporter/ATPase, N-terminus
1111116dUTPase
555555434Aconitase C-terminal domain
777777446Amino acid kinase family
11111117N-(5'phosphoribosyl)anthranilate (PRA) isomerase
222222214Acyl transferase domain
222222113Urease beta subunit
1111116Dihydrodipicolinate synthetase family
42282723262522193haloacid dehalogenase-like hydrolase
899989961Glycosyl hydrolases family 18
11111117Proliferating cell nuclear antigen, N-terminal domain
11111117Translation initiation factor IF-3, C-terminal domain
11111117Adenylosuccinate synthetase
11111117Asparaginase, N-terminal
333333321Peptidase S24-like
444444327Inorganic pyrophosphatase
111115Virus coat protein (TMV like)
455554331Glycosyl hydrolases family 16
355555533Glycosyl hydrolases family 15
172118111617100NADH:flavin oxidoreductase / NADH oxidase family
2222222143-hydroxyacyl-CoA dehydrogenase, C-terminal domain
444444428Glycosyl hydrolase family 20, catalytic domain
333332421HhH-GPD superfamily base excision DNA repair protein
11111117AIR carboxylase
555444229GMC oxidoreductase
222222214Asparagine synthase
1111116Fungal cellulose binding domain
16161516161615110Septin
444444226EF-1 guanine nucleotide exchange domain
111222110Homoserine dehydrogenase
122222516Flavin-binding monooxygenase-like
333333321tRNA synthetases class I (E and Q), catalytic domain
333333220tRNA synthetases class I (R)
576777645XPG N-terminal domain
11910999764Metallo-beta-lactamase superfamily
1111116F5/8 type C domain
444444731Choline/Carnitine o-acyltransferase
11111117Putative esterase
222222113Glycosyl hydrolase family 9
11111117Ferrochelatase
333333321Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
11111117Arginosuccinate synthase
11111117Electron transfer flavoprotein FAD-binding domain
888788754RNB domain
1112121012121180CNH domain
444444327Diacylglycerol kinase catalytic domain
1313131213131289Dual specificity phosphatase, catalytic domain
11111117MyTH4 domain
81211111111973P21-Rho-binding domain
25323132322933214PX domain
445665636Ras association (RalGDS/AF-6) domain
666887647UBX domain
776767646VHS domain
11114Phosphoinositide 3-kinase C2
332233319DAHP synthetase I family
554555534Carbon-nitrogen hydrolase
11111117Prephenate dehydratase
766666643Syntaxin
99108109762Pumilio-family RNA binding repeat
677677646Histone-like transcription factor (CBF/NF-Y) and archaeal histone
222222113Pterin binding enzyme
222222113ER lumen protein retaining receptor
122222213tRNA N6-adenosine threonylcarbamoyltransferase
11111117Histidinol dehydrogenase
333333220impB/mucB/samB family
111115Ribonuclease P
33
333333321Ribosomal L15
488656845Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
11111117Ribosomal prokaryotic L21 protein
11111117Ribosomal L28 family
333444324Ribosomal L29 protein
233233319Ribosomal L39 protein
222122213Ribosomal S17
11111128Ribulose-phosphate 3 epimerase family
11111117Translationally controlled tumour protein
122222213RNA pseudouridylate synthase
777777749Histone deacetylase domain
1111116Glycosyltransferase family 10 (fucosyltransferase) C-term
333333321POT family
222132416PWWP domain
17212118191820134SET domain
222222214Isochorismatase family
665666237Permease family
333333220Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
466565537XPG I-region
11111117DNA photolyase
1113Zinc dependent phospholipase C
222222214Cytosol aminopeptidase family, catalytic domain
2121118Sulfatase
111111176,7-dimethyl-8-ribityllumazine synthase
11111117Ribosomal protein S16
655555536Acyl CoA binding protein
666666642Cullin family
1111116Elongation factor TS
533333222FAD binding domain
777888651EamA-like transporter family
22
998998860ThiF family
222222214Ribosomal family S4e
322222215Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
444444226Ammonium Transporter Family
788777549Sulfate permease family
33