PFAM Domains • Mixia osmundae IAM 14324 v1.0
Annotations/GenomesMalgl1Mellp1Mixos1Pucgr1Rhoba1_1Sporo1Ustma1Walse1TotalAnnotation Description
PFAMs
4,0575,1325,5626,7845,9494,2225,6584,82442,188
117 transmembrane receptor (rhodopsin family)
3027303532293031244ATPase family associated with various cellular activities (AAA)
2328292531313824229ABC transporter
4445444433ATP synthase alpha/beta family, nucleotide-binding domain
1113EGF-like domain
1412131713141315111Elongation factor Tu GTP binding domain
77877312758Helix-loop-helix DNA-binding domain
1341817Hsp20/alpha crystallin family
8779767758Hsp70 protein
7888998865KH domain
11111117SH2 domain
1525202821172220168SH3 domain
951099710968Actin
1314171618131514120Ankyrin repeat
7768778757ADP-ribosylation factor family
17233816111292128Eukaryotic aspartyl protease
2233333221Cyclic nucleotide-binding domain
111111118Cytochrome c
2111212111Double-stranded RNA binding motif
1322152114171714133EF hand
21122121124Fe-4S binding domain
11111117Fibronectin type III domain
112Globin
24981054547Glutathione S-transferase, C-terminal domain
1211211110Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
1278546235Homeodomain
2322222217lactate/malate dehydrogenase, NAD binding domain
6355554639Myosin head (motor domain)
6231416116195100Cytochrome P450
821189511299928878764Protein kinase domain
78108131113777Pyridine nucleotide-disulphide oxidoreductase
1430242524242421186Ras family
410159151211783Response regulator receiver domain
11219516944RNase H
4170578555525660476RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
12728Retroviral aspartyl protease
112114Reverse transcriptase (RNA-dependent DNA polymerase)
321520Copper/zinc superoxide dismutase (SODC)
231112212Iron/manganese superoxide dismutases, alpha-hairpin domain
39514334546Subtilase family
829131630422113172Sugar (and other) transporter
788813610969Thioredoxin
4535544535Tubulin/FtsZ family, GTPase domain
1112117von Willebrand factor type A domain
1579315228262827286Zinc finger, C2H2 type
21363511033143524308Zinc finger, C3HC4 type (RING finger)
548814299118240Zinc knuckle
2122212214Protein-tyrosine phosphatase
1231502945314233273short chain dehydrogenase
1713191131312315160Zinc-binding dehydrogenase
3544766237Thiolase, N-terminal domain
1112115113Beta-ketoacyl synthase, N-terminal domain
43324444282Fe-2S iron-sulfur cluster binding domain
211111119Enolase, C-terminal TIM barrel domain
11Cytochrome C oxidase subunit II, periplasmic domain
6787866856Glutamine amidotransferase class-I
9911129910978TCP-1/cpn60 chaperonin family
11ATP synthase A chain
1433222219Glutamine synthetase, catalytic domain
2111112110Triosephosphate isomerase
9131210101013986E1-E2 ATPase
81911241922719129Core histone H2A/H2B/H3/H4
11Copper binding proteins, plastocyanin/azurin family
62423320Alpha amylase, catalytic domain
1345214121Phorbol esters/diacylglycerol binding domain (C1 domain)
4858754748Bacterial transferase hexapeptide (six repeats)
3535363331tRNA synthetases class I (I, L, M and V)
6129109881072Cyclin, N-terminal domain
12386959263Carboxylesterase family
4446444434DNA polymerase family B
2443341324ATP synthase subunit C
2222223116Peroxidase
336Beta-lactamase
22217C-5 cytosine-specific DNA methylase
1618191717142116138Calcineurin-like phosphoesterase
473925535Cellulase (glycosyl hydrolase family 5)
6444446537tRNA synthetases class II (D, K and N)
3032343435343630265Mitochondrial carrier protein
1011131517151311105Aminotransferase class I and II
6578667752Phosphoribosyl transferase domain
8141114121191089Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
111111118Phosphoglycerate kinase
2222122215Ribosomal protein S4/S9 N-terminal domain
2323222218Ribosomal protein S12/S23
111111118Chaperonin 10 Kd subunit
71013710891074C2 domain
1314201818121620131PH domain
44751044644bZIP transcription factor
612812111116884Aldehyde dehydrogenase family
534292463238334295Fungal Zn(2)-Cys(6) binuclear cluster domain
1015211921181816138Cytochrome b5-like Heme/Steroid binding domain
1225212Oxidoreductase molybdopterin binding domain
6776757752Oxidoreductase NAD-binding domain
1530165822171714189SNF2 family N-terminal domain
2222122215Ribosomal protein S7p/S5e
1119191720171616135Ubiquitin-conjugating enzyme
5552557539Isocitrate/isopropylmalate dehydrogenase
2222221215Ribosomal Proteins L2, RNA binding domain
123122112Hsp90 protein
2222231216Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
111111118Dihydrofolate reductase
10372224Cysteine-rich secretory protein family
111211119Ribosomal protein S3, C-terminal domain
11Cupin
11Annexin
25334433272-oxoacid dehydrogenases acyltransferase (catalytic domain)
282631123Catalase
21211119Disintegrin
1113UDP-glucoronosyl and UDP-glucosyl transferase
44511555847Aminotransferase class-III
222222214Ribosomal protein S19
111211119DNA gyrase B
5421432223Thiamine pyrophosphate enzyme, central domain
3333333324Lyase
1121222213Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
111111118Adenylate and Guanylate cyclase catalytic domain
111111118ATP synthase delta (OSCP) subunit
111111118Orotidine 5'-phosphate decarboxylase / HUMPS family
111121119Indole-3-glycerol phosphate synthase
11Neurohypophysial hormones, N-terminal Domain
2121129Aromatic amino acid lyase
111111118Pyruvate kinase, barrel domain
9117138810874Kinesin motor domain
2050253227222626228DnaJ domain
1414141515141414114Proteasome subunit
116810556354Major intrinsic protein
111111118ATP synthase
11Glycosyl hydrolase family 1
1111153'5'-cyclic nucleotide phosphodiesterase
111111118Profilin
2211112111Ribosomal protein L22p/L17e
2222222216Ribosomal protein L14p/L23e
811991511111084Ubiquitin family
3253523427Cofilin/tropomyosin-type actin-binding protein
122222111314-3-3 protein
1233324220Alkaline phosphatase
21115Zinc carboxypeptidase
1012101218131317105Aldo/keto reductase family
8107711612869Myb-like DNA-binding domain
333221519Forkhead domain
212112211Glycosyl hydrolases family 32 N-terminal domain
111111118Ribosomal protein L16p/L10e
1112211211Ribosomal protein S14p/S29e
3443333326FKBP-type peptidyl-prolyl cis-trans isomerase
111111118Glutathione peroxidase
2211112212
3535434431Flavodoxin
11Protamine P1
11Tropomyosin
11111117Calreticulin family
2147Common central domain of tyrosinase
3356537537Aminotransferase class-V
1121221111Ribonucleotide reductase, small chain
3645396941474034351DEAD/DEAH box helicase
60916315875676756637Helicase conserved C-terminal domain
11Fructose-bisphosphate aldolase class-I
1113111110EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
1111221110Ribosomal protein L23
111111118Pyridoxal-dependent decarboxylase, C-terminal sheet domain
111111129Ribosomal protein L5
3552555333Pyridoxal-dependent decarboxylase conserved domain
1222221113Citrate synthase, C-terminal domain
5556545540GHMP kinases N terminal domain
4655665441Biotin carboxylase, N-terminal domain
12121119Tryptophan synthase alpha chain
56787510755Pyridoxal-phosphate dependent enzyme
715121091112985NUDIX domain
4345434431pfkB family carbohydrate kinase
311117Glycosyl hydrolases family 28
2222222216Ribosomal protein L3
2221221214Ribosomal protein L11, RNA binding domain
66101310510868Histidine phosphatase superfamily (branch 1)
111111118Thymidylate synthase
4445444433ATP synthase alpha/beta chain, C terminal domain
2435445431Calponin homology (CH) domain
4457445336Glutamine amidotransferases class-II
2212222215Ribosomal protein S15
3133212'Cold-shock' DNA-binding domain
174416Thaumatin family
111111118Fructose-1-6-bisphosphatase, N-terminal domain
111111118Ribonucleotide reductase, all-alpha domain
2223223218Ribosomal protein S2
2332432221SRF-type transcription factor (DNA-binding and dimerisation domain)
86878710761GATA zinc finger
81712201816169116Amino acid permease
2264633329Prolyl oligopeptidase family
1121112110Ribosomal protein L30p/L7e
6385749446Histidine phosphatase superfamily (branch 2)
111111118Respiratory-chain NADH dehydrogenase, 30 Kd subunit
5444444433Aconitase family (aconitate hydratase)
55212Glycosyl hydrolase family 10
11125Glycosyl hydrolases family 17
2222222216Ribosomal protein S5, N-terminal domain
2221223216Nucleoside diphosphate kinase
11Tetraspanin family
1111121210Ribosomal protein S10p/S20e
12141110Arrestin (or S-antigen), N-terminal domain
11111117Phosphoglucose isomerase
112Carbohydrate phosphorylase
111111118SecY translocase
111111118Respiratory-chain NADH dehydrogenase, 49 Kd subunit
2223222217Ribosomal protein L6
3634333328Polyprenyl synthetase
1324222218Hexokinase
3336342327Dynamin family
111111118Transcription factor TFIID (or TATA-binding protein, TBP)
2443524125Rieske [2Fe-2S] domain
111115Phytochrome region
4977889557Biotin-requiring enzyme
121111119Phosphofructokinase
2122212214Ribosomal protein S17
111111118Hydroxymethylglutaryl-coenzyme A reductase
223222215FGGY family of carbohydrate kinases, N-terminal domain
59888711460Enoyl-CoA hydratase/isomerase
2222212215Ribosomal protein S9/S16
2223222217Transcription factor TFIIB repeat
5555747543Cytidine and deoxycytidylate deaminase zinc-binding region
111121119Molybdopterin oxidoreductase
3318433328Chromo (CHRromatin Organisation MOdifier) domain
11111128Phosphatidylinositol-specific phospholipase C, Y domain
121211210Phosphatidylinositol-specific phospholipase C, X domain
3341656432D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
112221211Malic enzyme, N-terminal domain
1111111186-phosphogluconate dehydrogenase, C-terminal domain
618112216248Multicopper oxidase
3776788551WW domain
2111221212Ribosomal RNA adenine dimethylase
911051011061059510094797WD domain, G-beta repeat
1232221316Heavy-metal-associated domain
3534333327Adenylate kinase
2222221215Phosphoglucomutase/phosphomannomutase, C-terminal domain
2122122214Ribosomal protein S8
2112112212Ribosomal protein S11
4646535235LIM domain
1241422117Regulator of chromosome condensation (RCC1) repeat
2222222216Ribosomal protein S13/S18
11REV protein (anti-repression trans-activator protein)
2224222218chorismate binding enzyme
333233332360s Acidic ribosomal protein
3849344439Prenyltransferase and squalene oxidase repeat
3658644642Protein kinase C terminal domain
1111116Single-strand binding protein family
111211119S-adenosylmethionine synthetase, N-terminal domain
1010989710871Bromodomain
4101010111311372Acyl-CoA dehydrogenase, C-terminal domain
1218121413121312106Ubiquitin carboxyl-terminal hydrolase
111115Ribosomal protein L36
111111219Ribonuclease T2 family
2676744440HSF-type DNA-binding
2222222216SRP54-type protein, GTPase domain
111211119Urease alpha-subunit, N-terminal domain
511712446251Serine carboxypeptidase
71188876661Phosphatidylinositol 3- and 4-kinase
1121111210Transketolase, thiamine diphosphate binding domain
11Glycosyl hydrolases family 11
1122219WHEP-TRS domain
2222332117Inositol monophosphatase family
3554524331Glutaredoxin
3222223117Isocitrate lyase family
111211119Serine hydroxymethyltransferase
121222212Iron-containing alcohol dehydrogenase
2222223217Ribosomal protein L10
633473430KOW motif
111115Ribosomal protein L34
112Ribosomal protein L33
2211212314RF-1 domain
224210Sodium:solute symporter family
111111118Imidazoleglycerol-phosphate dehydratase
111111118DNA polymerase family A
111111118IMP dehydrogenase / GMP reductase domain
121111119Glucose-6-phosphate dehydrogenase, NAD binding domain
5556655542Protein phosphatase 2C
1423221217Nucleotidyl transferase
1232321115Carbonic anhydrase
11111117Phosphoribulokinase / Uridine kinase family
3758454440Fatty acid desaturase
4565676544MutS domain V
111111118Delta-aminolevulinic acid dehydratase
1121222213Arginase family
7867666652MCM P-loop domain
1222222114Squalene/phytoene synthase
3654755641FHA domain
11NADH-ubiquinone/plastoquinone oxidoreductase chain 6
1213191217142910126AMP-binding enzyme
1634684335G-protein alpha subunit
38811878760HMG (high mobility group) box
11Cytochrome c oxidase subunit III
261141396354His Kinase A (phospho-acceptor) domain
2332323321Armadillo/beta-catenin-like repeat
2021202726252320182Tetratricopeptide repeat
2222233117Ion transport protein
111211119DNA gyrase/topoisomerase IV, subunit A
76116754753BRCA1 C Terminus (BRCT) domain
35661145444Glycosyl transferases group 1
2333643125Glycosyl transferase family 2
2125SAM domain (Sterile alpha motif)
2111117linker histone H1 and H5 family
111111118Ribosomal protein L7/L12 C-terminal domain
32117Pectate lyase
112ribonuclease
111211119Urease, gamma subunit
2334335326CoA-ligase
52344311335Phosphopantetheine attachment site
2322214319Formyl transferase
7767976655Metallopeptidase family M24
1320111515131511113Leucine Rich Repeat
131021202172218132alpha/beta hydrolase fold
3333333324RNA polymerase Rpb2, domain 6
1234432524PB1 domain
1222112213Staphylococcal nuclease homologue
791061078663Rab-GTPase-TBC domain
11111117Tudor domain
111211119WH1 domain
1324222319Zinc finger, ZZ type
121116HRDC domain
6477747850CBS domain
2522222219Ribosomal protein L13
2322212216Ribosomal protein L4/L1 family
11114Clp protease
4445434331S1 RNA binding domain
11111117HIUase/Transthyretin family
2242333221AhpC/TSA family
4444444432tRNA synthetases class I (W and Y)
1111127UvrD/REP helicase N-terminal domain
3664323431Rhodanese-like domain
2221213518Universal stress protein family
911221117181812118Acetyltransferase (GNAT) family
1111116SecE/Sec61-gamma subunits of protein translocation complex
111111118C-terminal regulatory domain of Threonine dehydratase
2222222216AIR synthase related protein, N-terminal domain
9778769659tRNA synthetase class II core domain (G, H, P, S and T)
11Phage integrase family
1221222214Tetrapyrrole (Corrin/Porphyrin) Methylases
111111118Glycosyl transferase family, a/b domain
11PDZ domain
212332417Class II Aldolase and Adducin N-terminal domain
22Adenoviral fibre protein (repeat/shaft region)
12331111Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
1657323330Fes/CIP4, and EFC/F-BAR homology domain
4322363326IQ calmodulin-binding motif
2222222216Phosphoinositide 3-kinase family, accessory domain (PIK domain)
2334443225Phospholipase D Active site motif
11111117Regulator of G protein signaling domain
2435334327GTPase-activator protein for Ras-like GTPase
3544435533RasGEF domain
4344415530RasGEF N-terminal motif
9131013131110786RhoGAP domain
10111114108101185RhoGEF domain
2233322320SPRY domain
3333333324RNA polymerase Rpb1, domain 2
111111118Guanylate kinase
3333333223Gelsolin repeat
6598637953UBA/TS-N domain
121216121611159103PHD-finger
111115GGL domain
5547665442HECT-domain (ubiquitin-transferase)
1121112110Helix-hairpin-helix motif
11BRCA2 repeat
111111118MSP (Major sperm protein) domain
1126732325Ribonuclease III domain
1121222213Region in Clathrin and VPS
3323233322RanBP1 domain
1222221214PPIC-type PPIASE domain
123Zn-finger in Ran binding protein and others
10141291510151095Zinc finger C-x8-C-x5-C-x3-H type (and similar)
11Poly(ADP-ribose) polymerase catalytic domain
111115Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
741252653781722269F-box domain
111111118Elongation factor 1 gamma, conserved domain
1111116Calpain family cysteine protease
11112219Copper fist DNA binding domain
6999458454CRAL/TRIO domain
132314115BTB/POZ domain
112Ricin-type beta-trefoil lectin domain
1221118Inhibitor of Apoptosis domain
1324332321Voltage gated chloride channel
111111129Caspase domain
15237119GDSL-like Lipase/Acylhydrolase
111111118Poly-adenylate binding protein, unique domain
111115POLO box duplicated region
14813111211181198ABC transporter transmembrane region
11316131Integrase core domain
3333323323FAD binding domain
211224113Condensation domain
111111118S-adenosyl-L-homocysteine hydrolase, NAD binding domain
1212111110HAMP domain
1121221212ribosomal L5P family C-terminus
5654665542Insulinase (Peptidase family M16)
2333443325Dehydrogenase E1 component
111111118Lumazine binding domain
5556555642Elongation factor G C-terminus
3545444332HMGL-like
4433444329DnaJ central domain
11Starch binding domain
2221222316Ribosomal protein L1p/L10e family
4754547339Cation transporting ATPase, C-terminus
4888668452Cation transporter/ATPase, N-terminus
11111117dUTPase
4444544433Aconitase C-terminal domain
2334323323Amino acid kinase family
111111118N-(5'phosphoribosyl)anthranilate (PRA) isomerase
2322225119Acyl transferase domain
111211119Urease beta subunit
21126Dihydrodipicolinate synthetase family
1522262324222519176haloacid dehalogenase-like hydrolase
3511212Glycosyl hydrolases family 2
115617672256Glycosyl hydrolases family 18
111111118Proliferating cell nuclear antigen, N-terminal domain
112Acylphosphatase
111111118Adenylosuccinate synthetase
111431213Asparaginase, N-terminal
233322217Peptidase S24-like
111111118Inorganic pyrophosphatase
1121529122Glycosyl hydrolases family 16
413231115Glycosyl hydrolases family 15
3253732530NADH:flavin oxidoreductase / NADH oxidase family
13222221153-hydroxyacyl-CoA dehydrogenase, C-terminal domain
332112113Glycosyl hydrolase family 20, catalytic domain
3464435332HhH-GPD superfamily base excision DNA repair protein
111111118AIR carboxylase
6849539650GMC oxidoreductase
2322212216Asparagine synthase
11Fungal cellulose binding domain
47413443544Septin
111111118EF-1 guanine nucleotide exchange domain
11122119Homoserine dehydrogenase
22Flavin-binding monooxygenase-like
11LPXTG cell wall anchor motif
3333333324tRNA synthetases class I (E and Q), catalytic domain
111111118tRNA synthetases class I (R)
2454526533XPG N-terminal domain
4465857544Metallo-beta-lactamase superfamily
1236F5/8 type C domain
2345443429Choline/Carnitine o-acyltransferase
11111117Putative esterase
112Glycosyl hydrolase family 9
111111118Ferrochelatase
212222112Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
111211119Arginosuccinate synthase
121111119Electron transfer flavoprotein FAD-binding domain
3333333324RNB domain
43233116Dioxygenase
3234222321CNH domain
212222314Diacylglycerol kinase catalytic domain
3576547441Dual specificity phosphatase, catalytic domain
145
2334334325P21-Rho-binding domain
7131114129121088PX domain
3252323323Ras association (RalGDS/AF-6) domain
3343423426UBX domain
2554445231VHS domain
11111117Phosphoinositide 3-kinase C2
3426222223DAHP synthetase I family
4446756339Carbon-nitrogen hydrolase
1121319N-acetyltransferase
11111117Prephenate dehydratase
3354424328Syntaxin
11Pentapeptide repeats (8 copies)
7544644539Pumilio-family RNA binding repeat
5465637642Histone-like transcription factor (CBF/NF-Y) and archaeal histone
1312111111Pterin binding enzyme
111111118ER lumen protein retaining receptor
2223222217Glycoprotease family
111111118Histidinol dehydrogenase
224434423impB/mucB/samB family
11111117
111111118Ribosomal L15
111111118Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
1113Ribosomal prokaryotic L21 protein
111111118Ribosomal L28 family
111111118Ribosomal L29 protein
1111116Ribosomal L39 protein
111211119Ribosomal S17
11111