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PFAM Domains • Hyaloraphidium curvatum SAG235-1 v1.0
Annotations/GenomesAnasp1Caecom1Chylag1Chytri1Gaesem1Ganpr1Hyacur1Neosp1Obemuc1Orpsp1_1PirE2_1Pirfi3Rhihy1Spipu1TotalAnnotation Description
PFAMs
9,30513,5899,27712,4088,3999,34112,60613,98712,19810,8388,4228,15110,0538,374146,948
13113281115817 transmembrane receptor (rhodopsin family)
4377 transmembrane receptor (Secretin family)
45783217153488541104042164727 transmembrane sweet-taste receptor of 3 GCPR
4241455445564760544340404948664ATPase family associated with various cellular activities (AAA)
1041081011074664881389910114462130551,347ABC transporter
4448424645444461ATP synthase alpha/beta family, nucleotide-binding domain
2151315119EGF-like domain
12111820171617152169121817209Elongation factor Tu GTP binding domain
79152386814273781812165Helix-loop-helix DNA-binding domain
525561344514614223223128396Hsp20/alpha crystallin family
171089896788342431138263Hsp70 protein
91171012128218127111012150KH domain
1113Kunitz/Bovine pancreatic trypsin inhibitor domain
112116SH2 domain
101863051181721615060115858960691,102SH3 domain
11101010119151711141010911158Actin
55221532231419821578391,084709268128533,914Ankyrin repeat
1125226622219151PAN domain
11211191089181391312915168ADP-ribosylation factor family
11103866321511309123Eukaryotic aspartyl protease
11152263101571676118107723364Cyclic nucleotide-binding domain
11Cystatin domain
11Cytochrome b(C-terminal)/b6/petD
112Cytochrome b/b6/petB
1131121111Cytochrome c
2214442323115741Double-stranded RNA binding motif
3931316123527384247326EF hand
22232212164Fe-4S binding domain
22Fibronectin type II domain
13222311113525Fibronectin type III domain
2114Globin
4871341719711133186121Glutathione S-transferase, C-terminal domain
3413331713331238Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
1210106111952361411135718305Homeodomain
1919Kazal-type serine protease inhibitor domain
1333433421222437lactate/malate dehydrogenase, NAD binding domain
41218Lectin C-type domain
22Ligand-gated ion channel
131212178842412271314139186Myosin head (motor domain)
2441106473314612301Cytochrome P450
1831941852551382342933212722141521832541513,029Protein kinase domain
341111112217692331212126Pyridine nucleotide-disulphide oxidoreductase
3747415530251664373327333432511Ras family
5323112815335164331242203Response regulator receiver domain
1123231161728RNase H
9092757866806114376877691103891,207RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
11Retroviral aspartyl protease
1213812153Reverse transcriptase (RNA-dependent DNA polymerase)
1212322112413169Serpin (serine protease inhibitor)
4633463534Copper/zinc superoxide dismutase (SODC)
113412112112222Iron/manganese superoxide dismutases, alpha-hairpin domain
1485843171168571710780392213626Subtilase family
252110345121111411272517118331Sugar (and other) transporter
2122143012161729223215171715279Thioredoxin
11Thyroglobulin type-1 repeat
61151528Trefoil (P-type) domain
2183712565Trypsin
11Thrombospondin type 1 domain
885777412766987101Tubulin/FtsZ family, GTPase domain
101214162161255184von Willebrand factor type A domain
6221112von Willebrand factor type D domain
4818531041810435806928475016186901Zinc finger, C2H2 type
65477510769193648688269604Zinc finger, C3HC4 type (RING finger)
3024978221441106920232212311Zinc knuckle
3343544743445356Protein-tyrosine phosphatase
15153256261162491733121294536673short chain dehydrogenase
561016134010413143672121279Zinc-binding dehydrogenase
11555813261114558Thiolase, N-terminal domain
1512223342849151133114Beta-ketoacyl synthase, N-terminal domain
21223654122343402Fe-2S iron-sulfur cluster binding domain
351624Papain family cysteine protease
1111111211112116Enolase, C-terminal TIM barrel domain
22Cytochrome C and Quinol oxidase polypeptide I
11Cytochrome C oxidase subunit II, periplasmic domain
8778791014888878117Glutamine amidotransferase class-I
12141113109102191411121010166TCP-1/cpn60 chaperonin family
11ATP synthase A chain
22462810441224354Glutamine synthetase, catalytic domain
111211121112116Triosephosphate isomerase
1318283923263022321212163122324E1-E2 ATPase
77181913151814385682714209Core histone H2A/H2B/H3/H4
11518Copper binding proteins, plastocyanin/azurin family
11843102812111751891Alpha amylase, catalytic domain
131228683259248141012154Phorbol esters/diacylglycerol binding domain (C1 domain)
10751086201691081689142Bacterial transferase hexapeptide (six repeats)
3455423545442353tRNA synthetases class I (I, L, M and V)
17181130112113281217818139226Cyclin, N-terminal domain
3212942181147145402623252Carboxylesterase family
8651045554861012694DNA polymerase family B
3335333631334346ATP synthase subunit C
113117Legume lectin domain
81721051113268Peroxidase
772195613172123Beta-lactamase
2256927481228563C-5 cytosine-specific DNA methylase
22NADH dehydrogenase
11Fibrinogen beta and gamma chains, C-terminal globular domain
6949143214252166274940382919492Calcineurin-like phosphoesterase
2521410684491042362475251Cellulase (glycosyl hydrolase family 5)
3365565653235663tRNA synthetases class II (D, K and N)
1315446740496324521311135551510Mitochondrial carrier protein
2025192216161647202226261916310Aminotransferase class I and II
1054651181768101089117Phosphoribosyl transferase domain
1517152015141419191315161918229Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
2212111431222125Phosphoglycerate kinase
222332233123230Ribosomal protein S4/S9 N-terminal domain
122242232223330Ribosomal protein S12/S23
112Bacterial regulatory helix-turn-helix proteins, AraC family
111211121111115Chaperonin 10 Kd subunit
3744222215222361174131331727412C2 domain
40248101317372134627451946383PH domain
91011411416814395772014215bZIP transcription factor
151220102424116111169141Aldehyde dehydrogenase family
189136913686129451313178025473Fungal Zn(2)-Cys(6) binuclear cluster domain
1372341244048123658133435339Cytochrome b5-like Heme/Steroid binding domain
2324611423Oxidoreductase molybdopterin binding domain
32713911132132131617112Oxidoreductase NAD-binding domain
1820223025262829282318163129343SNF2 family N-terminal domain
122222232112224Ribosomal protein S7p/S5e
2627243422292444302014262926375Ubiquitin-conjugating enzyme
3557568653335569Isocitrate/isopropylmalate dehydrogenase
1124222121112224Ribosomal Proteins L2, RNA binding domain
82211041Chitinase class I
4422234533332242Hsp90 protein
3323212531332235Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111111211111115Dihydrofolate reductase
13019623115186218022392151,036Chitin recognition protein
102110301411142216238172189Cysteine-rich secretory protein family
1112322221111121Ribosomal protein S3, C-terminal domain
6833119656360Annexin
11Extracellular link domain
3914171116135Eukaryotic-type carbonic anhydrase
34433334272-oxoacid dehydrogenases acyltransferase (catalytic domain)
21126Catalase
111112119Disintegrin
32224232213127UDP-glucoronosyl and UDP-glucosyl transferase
11345812231114551Aminotransferase class-III
212422222112225Ribosomal protein S19
111121121111216DNA gyrase B
4411238511451242Thiamine pyrophosphate enzyme, central domain
3246345632233450Lyase
1416242412571474192Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
3212423219Sodium:neurotransmitter symporter family
121138Ferritin-like domain
35422776107252231912170Adenylate and Guanylate cyclase catalytic domain
121111119ATP synthase delta (OSCP) subunit
1111111111111114Orotidine 5'-phosphate decarboxylase / HUMPS family
11ATP:guanido phosphotransferase, C-terminal catalytic domain
2211111311221120Indole-3-glycerol phosphate synthase
2518Aromatic amino acid lyase
145335542213341Pyruvate kinase, barrel domain
2528262418221436303524242627359Kinesin motor domain
3640274131333654372426363537493DnaJ domain
1314142214161427141011141414211Proteasome subunit
1149249261110353Major intrinsic protein
1111111111111114ATP synthase
774613165101610489Glycosyl hydrolase family 1
61013125531693781081153'5'-cyclic nucleotide phosphodiesterase
12242312121223Profilin
1134322221112227Ribosomal protein L22p/L17e
1132322232112227Ribosomal protein L14p/L23e
4851624Resolvase, N terminal domain
2322162113201946142115242023297Ubiquitin family
910455651658394695Cofilin/tropomyosin-type actin-binding protein
111112122111111714-3-3 protein
1223142242110539Alkaline phosphatase
441473764113349483Zinc carboxypeptidase
2332151710373727151419121512285Aldo/keto reductase family
2277751352091712201321178Myb-like DNA-binding domain
4442245711442347Forkhead domain
21111116Glycosyl hydrolases family 32 N-terminal domain
1223123115Ribosomal protein L16p/L10e
122332225112228Ribosomal protein S14p/S29e
66812865910456117103FKBP-type peptidyl-prolyl cis-trans isomerase
22232452722514263Glutathione peroxidase
12211119
54576773774481084Flavodoxin
3323111426332236Calreticulin family
1032112112380Common central domain of tyrosinase
1113Thymidine kinase
33785912471337577Aminotransferase class-V
2231222216Ribonucleotide reductase, small chain
4247546147454852684235425349685DEAD/DEAH box helicase
71767992817971929863557495911,117Helicase conserved C-terminal domain
1111116Fructose-bisphosphate aldolase class-I
1111113122112119EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
1122322221111223Ribosomal protein L23
2111121211112118Pyridoxal-dependent decarboxylase, C-terminal sheet domain
2211111423222125Ribosomal protein L5
2269398555316569Pyridoxal-dependent decarboxylase conserved domain
1156524251113441Citrate synthase, C-terminal domain
6478558666456682GHMP kinases N terminal domain
33107799672339785Biotin carboxylase, N-terminal domain
2212111111221119Tryptophan synthase alpha chain
11991271315161521110149153Pyridoxal-phosphate dependent enzyme
11171113102832186141212815207NUDIX domain
3356345351238657pfkB family carbohydrate kinase
513111122Glycosyl hydrolases family 28
1123222231112225Ribosomal protein L3
112432222112225Ribosomal protein L11, RNA binding domain
878761113107556710110Histidine phosphatase superfamily (branch 1)
1113Rubredoxin
24118Chloramphenicol acetyltransferase
1111111112111216Thymidylate synthase
41510Lipoxygenase
4438425644444460ATP synthase alpha/beta chain, C terminal domain
1615131291010239111015912174Calponin homology (CH) domain
3425463532336756Glutamine amidotransferases class-II
11114Phosphoenolpyruvate carboxylase
3222222322222230Ribosomal protein S15
213111141221121'Cold-shock' DNA-binding domain
1211128Thaumatin family
111121119Fructose-1-6-bisphosphatase, N-terminal domain
1212111110Ribonucleotide reductase, all-alpha domain
2323222321223231Ribosomal protein S2
233121161222329SRF-type transcription factor (DNA-binding and dimerisation domain)
141422331117162441712142723275GATA zinc finger
13151381211311319117Amino acid permease
58111310689123351311117Prolyl oligopeptidase family
2234212323212130Ribosomal protein L30p/L7e
54537646355531071Histidine phosphatase superfamily (branch 2)
1111122110Respiratory-chain NADH dehydrogenase, 30 Kd subunit
4444444855453462Aconitase family (aconitate hydratase)
1512158292821164Glycosyl hydrolase family 10
11Glycosyl hydrolases family 17
112222222112323Ribosomal protein S5, N-terminal domain
4568552463238566Nucleoside diphosphate kinase
182332422122436Tetraspanin family
12121222111117Ribosomal protein S10p/S20e
115155216219461Arrestin (or S-antigen), N-terminal domain
11Interleukin-1 / 18
111111121111114Phosphoglucose isomerase
1112112223111120Carbohydrate phosphorylase
233111221112121SecY translocase
1311111110Respiratory-chain NADH dehydrogenase, 49 Kd subunit
1123322221112225Ribosomal protein L6
2235333232223338Polyprenyl synthetase
4414221835443247Hexokinase
41255655772434574Dynamin family
251122114Biopterin-dependent aromatic amino acid hydroxylase
2212111215221124Transcription factor TFIID (or TATA-binding protein, TBP)
33RTX calcium-binding nonapeptide repeat (4 copies)
75510856955Rieske [2Fe-2S] domain
33Phytochrome region
336Proton-conducting membrane transporter
11109891128119878Biotin-requiring enzyme
5321133824342142Phosphofructokinase
112232223113225Ribosomal protein S17
1211133113Hydroxymethylglutaryl-coenzyme A reductase
2123244221212331FGGY family of carbohydrate kinases, N-terminal domain
332332143423134FERM central domain
2221112112116Sodium:dicarboxylate symporter family
11MerR family regulatory protein
213129386921021211180Enoyl-CoA hydratase/isomerase
2114212221113225Ribosomal protein S9/S16
252323232322233Transcription factor TFIIB repeat
554751012673259686Cytidine and deoxycytidylate deaminase zinc-binding region
121111119Molybdopterin oxidoreductase
44178610671522174813141Chromo (CHRromatin Organisation MOdifier) domain
11111132121116Phosphatidylinositol-specific phospholipase C, Y domain
41411114718351152Phosphatidylinositol-specific phospholipase C, X domain
444421017751343270D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
2322122611222331Malic enzyme, N-terminal domain
351292123PEP-utilising enzyme, mobile domain
11121112106-phosphogluconate dehydrogenase, C-terminal domain
11116398241Multicopper oxidase
11Granulin
13121121812121920147152214200WW domain
1111111112111115Ribosomal RNA adenine dimethylase
1781841731821591471222651862131501971912022,549WD domain, G-beta repeat
11Calponin family repeat
4343553532Heavy-metal-associated domain
5679763978548690Adenylate kinase
11Pathogenesis-related protein Bet v I family
2225233431222235Phosphoglucomutase/phosphomannomutase, C-terminal domain
112322222112223Ribosomal protein S8
113222222112223Ribosomal protein S11
1524961266247161214514170LIM domain
123Matrixin
23310435281125352Regulator of chromosome condensation (RCC1) repeat
1124222221112225Ribosomal protein S13/S18
112
11111128Tau and MAP protein, tubulin-binding repeat
11NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
1122222121112222chorismate binding enzyme
562424495354366260s Acidic ribosomal protein
1111116CUB domain
4333444542344552Prenyltransferase and squalene oxidase repeat
1111410793221065121412136Protein kinase C terminal domain
131121110Single-strand binding protein family
11Type II/IV secretion system protein
211111413241123S-adenosylmethionine synthetase, N-terminal domain
151615101491323121513141119199Bromodomain
1116132537151611144Acyl-CoA dehydrogenase, C-terminal domain
1620152015211726172314141718253Ubiquitin carboxyl-terminal hydrolase
11111117Ribosomal protein L36
222613431110136Ribonuclease T2 family
87565341746556687HSF-type DNA-binding
2342223312226SRP54-type protein, GTPase domain
111211119Urease alpha-subunit, N-terminal domain
2211153344821212372Serine carboxypeptidase
913913111071412131081310152Phosphatidylinositol 3- and 4-kinase
2311121317421130Transketolase, thiamine diphosphate binding domain
292824435636216Glycosyl hydrolases family 11
1121313212111222WHEP-TRS domain
2212222333223231Inositol monophosphatase family
6547365835246569Glutaredoxin
21111129Isocitrate lyase family
2223222323223232Serine hydroxymethyltransferase
713111151415961166Iron-containing alcohol dehydrogenase
322233243112230Ribosomal protein L10
5475