PFAM Domains • Septoria musiva SO2202 v1.0
Annotations/GenomesAltbr1Bauco1CocheC5_1Dotse1Hyspu1Lepmu1Mycfi2Mycgr3Pyrtr1Pyrtt1Rhyru1Sepmu1Seppo1Settu1Stano2TotalAnnotation Description
PFAMs
5,9037,2846,8948,1109,0167,5038,2796,4206,7138,5169,3077,5277,1768,6618,291115,600
117 transmembrane receptor (rhodopsin family)
324237456241494239465541393948657ATPase family associated with various cellular activities (AAA)
373042324738404340404832343943585ABC transporter
44444434444444459ATP synthase alpha/beta family, nucleotide-binding domain
1113EGF-like domain
131413141313141412131414141415204Elongation factor Tu GTP binding domain
1181214101013101112913121412171Helix-loop-helix DNA-binding domain
13223322123223334Hsp20/alpha crystallin family
677777777777777104Hsp70 protein
8108898999879789126KH domain
1113Ribulose bisphosphate carboxylase large chain, catalytic domain
11111111111111115SH2 domain
212124212324212324231923232321334SH3 domain
910810101110771011991010141Actin
3535493710032414158528731285368747Ankyrin repeat
42562251422413456PAN domain
777767777767777103ADP-ribosylation factor family
812121012613191213911101212171Eukaryotic aspartyl protease
24444444444444458Cyclic nucleotide-binding domain
112Cytochrome b(C-terminal)/b6/petD
11111111111111115Cytochrome c
22211122211322125Double-stranded RNA binding motif
182019171816182019171619171717268EF hand
221122111221112224Fe-4S binding domain
22432133323422339Fibronectin type III domain
1111111111111114Globin
10125211712181664181411811183Glutathione S-transferase, C-terminal domain
1111111111111114Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
11Hemopexin
558610643910956810104Homeodomain
43422432332334446lactate/malate dehydrogenase, NAD binding domain
64455655555454573Myosin head (motor domain)
635312078158639173879819574631331171,466Cytochrome P450
8493951051471141061131041121271181111061151,650Protein kinase domain
91513162214191512141913131515224Pyridine nucleotide-disulphide oxidoreductase
222323242724242422232223242523353Ras family
211725251822202224261922212522329Response regulator receiver domain
2334545351215649RNase H
495847656153625758566559595855862RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
3126434Reverse transcriptase (RNA-dependent DNA polymerase)
12232212222222330Copper/zinc superoxide dismutase (SODC)
22222222222222129Iron/manganese superoxide dismutases, alpha-hairpin domain
74104111089998641210121Subtilase family
74579755786291938862110514464811,107Sugar (and other) transporter
101110121210101099101091213157Thioredoxin
51221321221113431Trypsin
43444434445334457Tubulin/FtsZ family, GTPase domain
13344341345334348von Willebrand factor type A domain
564870615451476270553946476147814Zinc finger, C2H2 type
354140527357513943605448475147738Zinc finger, C3HC4 type (RING finger)
163293886523201231125154Zinc knuckle
22222222222222230Protein-tyrosine phosphatase
981271171331727913812411311317698831311211,823short chain dehydrogenase
525266607545606860638049416861900Zinc-binding dehydrogenase
95966667766656696Thiolase, N-terminal domain
10521102916101423264113123122283Beta-ketoacyl synthase, N-terminal domain
445465646666666802Fe-2S iron-sulfur cluster binding domain
11112111111111116Enolase, C-terminal TIM barrel domain
123Cytochrome C and Quinol oxidase polypeptide I
11Cytochrome C oxidase subunit II, periplasmic domain
7871088886998998122Glutamine amidotransferase class-I
10101010101010101011101010109150TCP-1/cpn60 chaperonin family
11ATP synthase A chain
33324332333223342Glutamine synthetase, catalytic domain
22222222222222230Triosephosphate isomerase
131217101316111316151712121716210E1-E2 ATPase
587778663176282096161Core histone H2A/H2B/H3/H4
112Copper binding proteins, plastocyanin/azurin family
67611961313679121266129Alpha amylase, catalytic domain
22132222222221229Phorbol esters/diacylglycerol binding domain (C1 domain)
69675810988691098118Bacterial transferase hexapeptide (six repeats)
73744346854544573tRNA synthetases class I (I, L, M and V)
578667678786796103Cyclin, N-terminal domain
242122172822221722222416142331325Carboxylesterase family
44444444444444460DNA polymerase family B
34444355444454461ATP synthase subunit C
11Legume lectin domain
74945734776337682Peroxidase
876101951110781866511137Beta-lactamase
2332321333333236C-5 cytosine-specific DNA methylase
112NADH dehydrogenase
233024273124262726292620212724385Calcineurin-like phosphoesterase
10118816774691455713130Cellulase (glycosyl hydrolase family 5)
7777107777787778110tRNA synthetases class II (D, K and N)
363839383738384040414238374041583Mitochondrial carrier protein
11114recA bacterial DNA recombination protein
7131215151515139152015171614211Aminotransferase class I and II
688989899910108109130Phosphoribosyl transferase domain
11121212111212121212912121210173Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11111111111111115Phosphoglycerate kinase
22212221222122227Ribosomal protein S4/S9 N-terminal domain
22221122221221226Ribosomal protein S12/S23
21112111111Bacterial regulatory helix-turn-helix proteins, AraC family
11111111111111115Chaperonin 10 Kd subunit
111111141110131311121113131110175C2 domain
161817181720171718201917171920270PH domain
696988888988886117bZIP transcription factor
201827222017201821223115151919304Aldehyde dehydrogenase family
791201151529111612110492107116123112160811,689Fungal Zn(2)-Cys(6) binuclear cluster domain
182123262021242422242423202623339Cytochrome b5-like Heme/Steroid binding domain
34473335334543559Oxidoreductase molybdopterin binding domain
91414191211141210161714111614203Oxidoreductase NAD-binding domain
212324232724242626263022242426370SNF2 family N-terminal domain
22222222222222230Ribosomal protein S7p/S5e
212021262521252421252423222523346Ubiquitin-conjugating enzyme
787866997798867112Isocitrate/isopropylmalate dehydrogenase
22222222222222230Ribosomal Proteins L2, RNA binding domain
11111111112111116Hsp90 protein
12222222222222229Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111111111111115Dihydrofolate reductase
9210248653115662Chitin recognition protein
33133344222552446Cysteine-rich secretory protein family
21111111111111116Ribosomal protein S3, C-terminal domain
35437346667346572Cupin
12222222222222229Annexin
11112111211215Eukaryotic-type carbonic anhydrase
1111111119Chalcone and stilbene synthases, N-terminal domain
233332333333333432-oxoacid dehydrogenases acyltransferase (catalytic domain)
45466433556444467Catalase
11111111111111115Disintegrin
112UDP-glucoronosyl and UDP-glucosyl transferase
6699786989118889121Aminotransferase class-III
12122122222222126Ribosomal protein S19
11111111111111115DNA gyrase B
463894104348544581Thiamine pyrophosphate enzyme, central domain
44444445444334459Lyase
12222222222222229Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
11111323215Sodium:neurotransmitter symporter family
1111111111111114Adenylate and Guanylate cyclase catalytic domain
1111111111111114ATP synthase delta (OSCP) subunit
11111111111111115Orotidine 5'-phosphate decarboxylase / HUMPS family
11111111111111115Indole-3-glycerol phosphate synthase
1113Neurohypophysial hormones, N-terminal Domain
11111229Aromatic amino acid lyase
11111111111111115Pyruvate kinase, barrel domain
10101110131111111010121010913161Kinesin motor domain
302827263828282832303128253128438DnaJ domain
121414141414141414141314141414207Proteasome subunit
785115711107769887116Major intrinsic protein
11111111111111115ATP synthase
233233423333236Glycosyl hydrolase family 1
11111111111111143'5'-cyclic nucleotide phosphodiesterase
1111111111111114Profilin
2111111111111115Ribosomal protein L22p/L17e
21222222221222228Ribosomal protein L14p/L23e
1011816161017101112121091110173Ubiquitin family
24244442253445453Cofilin/tropomyosin-type actin-binding protein
3222222222222223114-3-3 protein
55635643454446670Alkaline phosphatase
101833823773338877Zinc carboxypeptidase
223023283521332221323421182724391Aldo/keto reductase family
111511151712171214131116151612207Myb-like DNA-binding domain
24355446444454462Forkhead domain
22321254333333544Glycosyl hydrolases family 32 N-terminal domain
11111111111111115Ribosomal protein L16p/L10e
1312331132223330Ribosomal protein S14p/S29e
54544544554445567FKBP-type peptidyl-prolyl cis-trans isomerase
11111111111111115Glutathione peroxidase
12123122112221124
669875987786686106Flavodoxin
1112117Protamine P1
1111111111111114Calreticulin family
846813711761091191010129Common central domain of tyrosinase
383997843889896102Aminotransferase class-V
11111111111111115Ribonucleotide reductase, small chain
444144393840424652474040404238633DEAD/DEAH box helicase
6572767376747572778081737273761,115Helicase conserved C-terminal domain
11111111111111115EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22222222222222230Ribosomal protein L23
1111122111111116Pyridoxal-dependent decarboxylase, C-terminal sheet domain
22121222222222228Ribosomal protein L5
65657567665556787Pyridoxal-dependent decarboxylase conserved domain
22332223222222233Citrate synthase, C-terminal domain
55555555555555474GHMP kinases N terminal domain
77676676677777699Biotin carboxylase, N-terminal domain
11111111111111115Tryptophan synthase alpha chain
8911101112111110141211111112164Pyridoxal-phosphate dependent enzyme
111313141813141514131513131513207NUDIX domain
54444575556665677pfkB family carbohydrate kinase
65447652657556477Glycosyl hydrolases family 28
111121122113Luciferase-like monooxygenase
32222222222222231Ribosomal protein L3
12222221122222227Ribosomal protein L11, RNA binding domain
101311151512161110131514121214193Histidine phosphatase superfamily (branch 1)
11111111111111115Thymidylate synthase
11111111311Lipoxygenase
44444444444444359ATP synthase alpha/beta chain, C terminal domain
55554555455555371Calponin homology (CH) domain
65664544554445370Glutamine amidotransferases class-II
12222222222222229Ribosomal protein S15
11111111111111115Thaumatin family
21212211221112122Fructose-1-6-bisphosphatase, N-terminal domain
11111111111111115Ribonucleotide reductase, all-alpha domain
22222222222222230Ribosomal protein S2
22222243232322235SRF-type transcription factor (DNA-binding and dimerisation domain)
57673598566885593GATA zinc finger
222338355429483332335138373233538Amino acid permease
23233532263556757Prolyl oligopeptidase family
21212311221113225Ribosomal protein L30p/L7e
610910111010710129991212146Histidine phosphatase superfamily (branch 2)
11111111111111115Respiratory-chain NADH dehydrogenase, 30 Kd subunit
44454465457454469Aconitase family (aconitate hydratase)
545133124445849Glycosyl hydrolase family 10
14165261235653353Glycosyl hydrolases family 17
22122222122222228Ribosomal protein S5, N-terminal domain
11111111112111116Nucleoside diphosphate kinase
111126Tetraspanin family
21211112211111220Ribosomal protein S10p/S20e
32324322445226549Arrestin (or S-antigen), N-terminal domain
11111211111111116Phosphoglucose isomerase
11111111111111115Carbohydrate phosphorylase
11111111111111115SecY translocase
11111111111111115Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222222222222230Ribosomal protein L6
54733345553443361Polyprenyl synthetase
54445433554334561Hexokinase
468577569576611597Dynamin family
11111112111111116Transcription factor TFIID (or TATA-binding protein, TBP)
44574555555555675Rieske [2Fe-2S] domain
639Proton-conducting membrane transporter
699987889999896123Biotin-requiring enzyme
11111111111111115Phosphofructokinase
22122222222222128Ribosomal protein S17
11111111111112116Hydroxymethylglutaryl-coenzyme A reductase
34343344333443351FGGY family of carbohydrate kinases, N-terminal domain
111111118Sodium:dicarboxylate symporter family
812112211920169101513111011188Enoyl-CoA hydratase/isomerase
22222222222222230Ribosomal protein S9/S16
22222222222222230Transcription factor TFIIB repeat
596787886568865102Cytidine and deoxycytidylate deaminase zinc-binding region
21111111111111116Molybdopterin oxidoreductase
4725665221275510684Chromo (CHRromatin Organisation MOdifier) domain
21332333333333341Phosphatidylinositol-specific phospholipase C, Y domain
33452355434553357Phosphatidylinositol-specific phospholipase C, X domain
9881098867815881010132D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
12222212222212227Malic enzyme, N-terminal domain
122222221221122266-phosphogluconate dehydrogenase, C-terminal domain
5101013206148981687810152Multicopper oxidase
9810810109910119881111141WW domain
11111111112111116Ribosomal RNA adenine dimethylase
13632522532135Yeast PIR protein repeat
971001181061071011011041031011091021001171001,566WD domain, G-beta repeat
64434433445444460Heavy-metal-associated domain
11Transferrin
43443332443343350Adenylate kinase
31322222322112230Phosphoglucomutase/phosphomannomutase, C-terminal domain
22221211111111221Ribosomal protein S8
11112111111111116Ribosomal protein S11
35443444442554459LIM domain
1214Matrixin
12111112221112221Regulator of chromosome condensation (RCC1) repeat
32221222222222230Ribosomal protein S13/S18
112NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
22222222231222230chorismate binding enzyme
4334433333533445260s Acidic ribosomal protein
44444444444444460Prenyltransferase and squalene oxidase repeat
57376664566775787Protein kinase C terminal domain
1111111111111114Single-strand binding protein family
11111111111111115S-adenosylmethionine synthetase, N-terminal domain
676888867977688109Bromodomain
14131616151214151212131181414199Acyl-CoA dehydrogenase, C-terminal domain
151516151515171517141617171417235Ubiquitin carboxyl-terminal hydrolase
111111111110Ribosomal protein L36
23222222222222231Ribonuclease T2 family
23333333333333243HSF-type DNA-binding
22222222222222230SRP54-type protein, GTPase domain
11111111111111115Urease alpha-subunit, N-terminal domain
96111416816131010111191111166Serine carboxypeptidase
788889887888888119Phosphatidylinositol 3- and 4-kinase
22223222222222231Transketolase, thiamine diphosphate binding domain
4252421342115743Glycosyl hydrolases family 11
53544444453