PFAM Domains • Laccaria amethystina LaAM-08-1 v2.0
Annotations/GenomesAmamu1Corgl3Hebcy2Lacam1Lacam2Lacbi2LacbiD101_1Trima3TotalAnnotation Description
PFAMs
7,8558,1797,6757,9307,7938,6568,9697,49964,556
117 transmembrane receptor (rhodopsin family)
4343453939394344335ATPase family associated with various cellular activities (AAA)
3551444543495046363ABC transporter
4445544535ATP synthase alpha/beta family, nucleotide-binding domain
1214EGF-like domain
1716181717161715133Elongation factor Tu GTP binding domain
1411121314201412110Helix-loop-helix DNA-binding domain
14107881012574Hsp20/alpha crystallin family
991213131515995Hsp70 protein
912799810771KH domain
111111118SH2 domain
2632283232403827255SH3 domain
1113111616152012114Actin
4546314827954260394Ankyrin repeat
78899911869ADP-ribosylation factor family
3123152525243615194Eukaryotic aspartyl protease
3333333324Cyclic nucleotide-binding domain
1113Cytochrome b(C-terminal)/b6/petD
224Cytochrome b/b6/petB
111111118Cytochrome c
148814141114891Double-stranded RNA binding motif
2217191919182015149EF hand
1111121194Fe-4S binding domain
11111117Fibronectin type III domain
1915599132118109Glutathione S-transferase, C-terminal domain
212101253136Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
246Hemopexin
889111110111583Homeodomain
112Laminin EGF domain
2222222216lactate/malate dehydrogenase, NAD binding domain
55566710549Myosin head (motor domain)
12517189868786101103848Cytochrome P450
1621652061911932172551501,539Protein kinase domain
2015171212141611117Pyridine nucleotide-disulphide oxidoreductase
4325293737535528307Ras family
9877777860Response regulator receiver domain
619511581064RNase H
7069657983717871586RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
22711Reverse transcriptase (RNA-dependent DNA polymerase)
12111118Copper/zinc superoxide dismutase (SODC)
3223333221Iron/manganese superoxide dismutases, alpha-hairpin domain
1261255511359Subtilase family
2726222323213126199Sugar (and other) transporter
9111011111012983Thioredoxin
6595566547Tubulin/FtsZ family, GTPase domain
13654465649von Willebrand factor type A domain
8071587566637749539Zinc finger, C2H2 type
6059566867667455505Zinc finger, C3HC4 type (RING finger)
51322029113416193Zinc knuckle
2322222217Protein-tyrosine phosphatase
4859485151495754417short chain dehydrogenase
2829252526313530229Zinc-binding dehydrogenase
4554444434Thiolase, N-terminal domain
4945555239Beta-ketoacyl synthase, N-terminal domain
33344743312Fe-2S iron-sulfur cluster binding domain
347Papain family cysteine protease
111111118Enolase, C-terminal TIM barrel domain
11215Cytochrome C and Quinol oxidase polypeptide I
112Cytochrome C oxidase subunit II, periplasmic domain
710788139870Glutamine amidotransferase class-I
11101112121313991TCP-1/cpn60 chaperonin family
111115ATP synthase A chain
3443373330Glutamine synthetase, catalytic domain
111111118Triosephosphate isomerase
1116141313201517119E1-E2 ATPase
1915162725241923168Core histone H2A/H2B/H3/H4
11223312Copper binding proteins, plastocyanin/azurin family
55877910657Alpha amylase, catalytic domain
5546666644Phorbol esters/diacylglycerol binding domain (C1 domain)
4554444636Bacterial transferase hexapeptide (six repeats)
3333334325tRNA synthetases class I (I, L, M and V)
101011141414131197Cyclin, N-terminal domain
121516141415177110Carboxylesterase family
444444731DNA polymerase family B
3433343326ATP synthase subunit C
21683334241Peroxidase
474423125Beta-lactamase
3444444330C-5 cytosine-specific DNA methylase
1113NADH dehydrogenase
2727313233333530248Calcineurin-like phosphoesterase
810109999872Cellulase (glycosyl hydrolase family 5)
8565555544tRNA synthetases class II (D, K and N)
3840373737414437311Mitochondrial carrier protein
1712141415121213109Aminotransferase class I and II
67677811759Phosphoribosyl transferase domain
1312121212131712103Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
111111118Phosphoglycerate kinase
2222234219Ribosomal protein S4/S9 N-terminal domain
2222222216Ribosomal protein S12/S23
112111119Chaperonin 10 Kd subunit
1424171414181817136C2 domain
1620162322242220163PH domain
6866675650bZIP transcription factor
1321121515151520126Aldehyde dehydrogenase family
5861667779738073567Fungal Zn(2)-Cys(6) binuclear cluster domain
2022242222232524182Cytochrome b5-like Heme/Steroid binding domain
243334120Oxidoreductase molybdopterin binding domain
7888889662Oxidoreductase NAD-binding domain
2323272524222323190SNF2 family N-terminal domain
2222233218Ribosomal protein S7p/S5e
2124232222232521181Ubiquitin-conjugating enzyme
5856666648Isocitrate/isopropylmalate dehydrogenase
2222224218Ribosomal Proteins L2, RNA binding domain
2222223217Hsp90 protein
2222323218Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
111111118Dihydrofolate reductase
112Chitin recognition protein
1151210911150Cysteine-rich secretory protein family
111111118Ribosomal protein S3, C-terminal domain
1512211114Cupin
111123110Annexin
228416Eukaryotic-type carbonic anhydrase
43333333252-oxoacid dehydrogenases acyltransferase (catalytic domain)
2421111214Catalase
111111118Disintegrin
226414UDP-glucoronosyl and UDP-glucosyl transferase
5556667545Aminotransferase class-III
3222243220Ribosomal protein S19
111111118DNA gyrase B
2432233322Thiamine pyrophosphate enzyme, central domain
3434444329Lyase
1123333218Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1122213113Adenylate and Guanylate cyclase catalytic domain
211111119ATP synthase delta (OSCP) subunit
111111118Orotidine 5'-phosphate decarboxylase / HUMPS family
3112222215Indole-3-glycerol phosphate synthase
2342222219Aromatic amino acid lyase
111111118Pyruvate kinase, barrel domain
999101010121079Kinesin motor domain
3138323232363430265DnaJ domain
1414141414141415113Proteasome subunit
5766679753Major intrinsic protein
111111118ATP synthase
2327Glycosyl hydrolase family 1
1111111183'5'-cyclic nucleotide phosphodiesterase
111111118Profilin
2121111413Ribosomal protein L22p/L17e
2222222216Ribosomal protein L14p/L23e
1818162628212622175Ubiquitin family
4555555539Cofilin/tropomyosin-type actin-binding protein
211111131114-3-3 protein
222223215Alkaline phosphatase
11111218Zinc carboxypeptidase
2536252526242833222Aldo/keto reductase family
1513121414141615113Myb-like DNA-binding domain
5445556539Forkhead domain
111111118Ribosomal protein L16p/L10e
2222222216Ribosomal protein S14p/S29e
3335566536FKBP-type peptidyl-prolyl cis-trans isomerase
1112211110Glutathione peroxidase
1212222113
9754456444Flavodoxin
111111118Calreticulin family
283223424Common central domain of tyrosinase
6776666953Aminotransferase class-V
2228711225Ribonucleotide reductase, small chain
7670525966809362558DEAD/DEAH box helicase
106106919293115133103839Helicase conserved C-terminal domain
11114Fructose-bisphosphate aldolase class-I
111111118EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
2223322218Ribosomal protein L23
111111219Pyridoxal-dependent decarboxylase, C-terminal sheet domain
112111119Ribosomal protein L5
5855544339Pyridoxal-dependent decarboxylase conserved domain
3333333324Citrate synthase, C-terminal domain
5565566543GHMP kinases N terminal domain
5665567646Biotin carboxylase, N-terminal domain
111111118Tryptophan synthase alpha chain
8778777758Pyridoxal-phosphate dependent enzyme
1516181414141715123NUDIX domain
5564455438pfkB family carbohydrate kinase
323365224Glycosyl hydrolases family 28
2222221215Ribosomal protein L3
2222222216Ribosomal protein L11, RNA binding domain
191197778876Histidine phosphatase superfamily (branch 1)
111111118Thymidylate synthase
122117Lipoxygenase
4444444533ATP synthase alpha/beta chain, C terminal domain
5644456438Calponin homology (CH) domain
5655556845Glutamine amidotransferases class-II
2222222216Ribosomal protein S15
3132233118Thaumatin family
111111118Fructose-1-6-bisphosphatase, N-terminal domain
121111119Ribonucleotide reductase, all-alpha domain
2222222216Ribosomal protein S2
2523433527SRF-type transcription factor (DNA-binding and dimerisation domain)
10139121212121090GATA zinc finger
2121182424232419174Amino acid permease
11Bacterial regulatory proteins, crp family
4665586646Prolyl oligopeptidase family
111111118Ribosomal protein L30p/L7e
7679989661Histidine phosphatase superfamily (branch 2)
111111118Respiratory-chain NADH dehydrogenase, 30 Kd subunit
4445586440Aconitase family (aconitate hydratase)
213Glycosyl hydrolase family 10
2333233322Glycosyl hydrolases family 17
3222222217Ribosomal protein S5, N-terminal domain
2122222215Nucleoside diphosphate kinase
3123333321Tetraspanin family
15524118Galactoside-binding lectin
3222222116Ribosomal protein S10p/S20e
2364488237Arrestin (or S-antigen), N-terminal domain
111111118Phosphoglucose isomerase
111111129Carbohydrate phosphorylase
111111118SecY translocase
1112253116Respiratory-chain NADH dehydrogenase, 49 Kd subunit
2222222216Ribosomal protein L6
7756686550Polyprenyl synthetase
2242222218Hexokinase
6778888759Dynamin family
1221122112Transcription factor TFIID (or TATA-binding protein, TBP)
4544453433Rieske [2Fe-2S] domain
333110Proton-conducting membrane transporter
99988881069Biotin-requiring enzyme
111111219Phosphofructokinase
2222222216Ribosomal protein S17
1112222112Hydroxymethylglutaryl-coenzyme A reductase
3333323323FGGY family of carbohydrate kinases, N-terminal domain
7888888964Enoyl-CoA hydratase/isomerase
2222222216Ribosomal protein S9/S16
3232232219Transcription factor TFIIB repeat
8677779657Cytidine and deoxycytidylate deaminase zinc-binding region
111111118Molybdopterin oxidoreductase
1515798211069154Chromo (CHRromatin Organisation MOdifier) domain
4735546236Phosphatidylinositol-specific phospholipase C, Y domain
4735545235Phosphatidylinositol-specific phospholipase C, X domain
3664445739D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
3344565232Malic enzyme, N-terminal domain
1111111186-phosphogluconate dehydrogenase, C-terminal domain
19839913121790Multicopper oxidase
79108889968WW domain
2222222216Ribosomal RNA adenine dimethylase
3351811422212312212761381,745WD domain, G-beta repeat
5434434532Heavy-metal-associated domain
3333333324Adenylate kinase
2212222215Phosphoglucomutase/phosphomannomutase, C-terminal domain
111111118Ribosomal protein S8
2222223217Ribosomal protein S11
6676676650LIM domain
3664524Matrixin
4333333325Regulator of chromosome condensation (RCC1) repeat
2222222216Ribosomal protein S13/S18
123NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
2222222216chorismate binding enzyme
343444432960s Acidic ribosomal protein
4464465437Prenyltransferase and squalene oxidase repeat
7656666749Protein kinase C terminal domain
111111118Single-strand binding protein family
111111118S-adenosylmethionine synthetase, N-terminal domain
10101011111091081Bromodomain
88988881168Acyl-CoA dehydrogenase, C-terminal domain
1514141920161714129Ubiquitin carboxyl-terminal hydrolase
111111118Ribosomal protein L36
443333323Ribonuclease T2 family
10965544447HSF-type DNA-binding
2222222216SRP54-type protein, GTPase domain
111111129Urease alpha-subunit, N-terminal domain
1291067781069Serine carboxypeptidase
8898888865Phosphatidylinositol 3- and 4-kinase
1232222216Transketolase, thiamine diphosphate binding domain
11111117WHEP-TRS domain
6224422224Inositol monophosphatase family
5555557744Glutaredoxin
3542223425Isocitrate lyase family
3111111110Serine hydroxymethyltransferase
2222222216Iron-containing alcohol dehydrogenase
2222222115Ribosomal protein L10
555910810557KOW motif
111111118Ribosomal protein L34
2321123216RF-1 domain
2212222316Sodium:solute symporter family
111111118Imidazoleglycerol-phosphate dehydratase
11111117DNA polymerase family A
111111118IMP dehydrogenase / GMP reductase domain
121111119Glucose-6-phosphate dehydrogenase, NAD binding domain
1013101212912987Protein phosphatase 2C
3133333322Nucleotidyl transferase
2374479339Carbonic anhydrase
111111118Phosphoribulokinase / Uridine kinase family
9101199891277Fatty acid desaturase
6666669853MutS domain V
111111118Delta-aminolevulinic acid dehydratase
3352222423Arginase family
6966666853MCM P-loop domain
1111122211Squalene/phytoene synthase
89811111111978FHA domain
112NADH-ubiquinone/plastoquinone oxidoreductase chain 6
2731251820293230212AMP-binding enzyme
1214171718493415176G-protein alpha subunit
1817131819162016137HMG (high mobility group) box
1113NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
11114Cytochrome c oxidase subunit III
3744444535His Kinase A (phospho-acceptor) domain
3432223423Armadillo/beta-catenin-like repeat
29303810951736832430Tetratricopeptide repeat
3332222320Ion transport protein
111111118DNA gyrase/topoisomerase IV, subunit A
1113VPR/VPX protein
111011111112141292BRCA1 C Terminus (BRCT) domain
6866676752Glycosyl transferases group 1
4363333328Glycosyl transferase family 2
134111213SAM domain (Sterile alpha motif)
2444444430linker histone H1 and H5 family
111111118Ribosomal protein L7/L12 C-terminal domain
1223311ribonuclease
111111129Urease, gamma subunit
4333333325CoA-ligase
4886657650Phosphopantetheine attachment site
2223322218Formyl transferase
999101099873Metallopeptidase family M24
1414131717161813122Leucine Rich Repeat
3344312425202630233alpha/beta hydrolase fold
3333333324RNA polymerase Rpb2, domain 6
5655576544PB1 domain
2222222216Staphylococcal nuclease homologue
21111010101112994Rab-GTPase-TBC domain
111111118Tudor domain
1211122212WH1 domain
3334446532Zinc finger, ZZ type
11111117HRDC domain
9101099910975CBS domain
2222222216Ribosomal protein L13
2222222216Ribosomal protein L4/L1 family
111111118Clp protease
4553344331S1 RNA binding domain
111111219HIUase/Transthyretin family
4544444433AhpC/TSA family
4447744539tRNA synthetases class I (W and Y)
111111118UvrD/REP helicase N-terminal domain
4444444331Rhodanese-like domain
2223422219Universal stress protein family
2229312020282225197Acetyltransferase (GNAT) family
111111118SecE/Sec61-gamma subunits of protein translocation complex
111111118C-terminal regulatory domain of Threonine dehydratase
2322222217AIR synthase related protein, N-terminal domain
6966666752tRNA synthetase class II core domain (G, H, P, S and T)
42219Phage integrase family
2222255323Tetrapyrrole (Corrin/Porphyrin) Methylases
111111118Glycosyl transferase family, a/b domain
1121111311Class II Aldolase and Adducin N-terminal domain
4444433632Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
5687786653Fes/CIP4, and EFC/F-BAR homology domain
2444456231IQ calmodulin-binding motif
2222222216Phosphoinositide 3-kinase family, accessory domain (PIK domain)
3534444431Phospholipase D Active site motif
111111118Regulator of G protein signaling domain
4744444435GTPase-activator protein for Ras-like GTPase
5798879659RasGEF domain
6789989763RasGEF N-terminal motif
1314151313131412107RhoGAP domain
1514131616161814122RhoGEF domain
4444444432SPRY domain
3333534327RNA polymerase Rpb1, domain 2
111111118Guanylate kinase
3444444330Gelsolin repeat
10139981091078UBA/TS-N domain
1525251919181927167PHD-finger
12115GGL domain
57655561150HECT-domain (ubiquitin-transferase)
1112222112Helix-hairpin-helix motif
1112223113MSP (Major sperm protein) domain
71199979667Ribonuclease III domain
2222222216Region in Clathrin and VPS
3344434429RanBP1 domain
2222222317PPIC-type PPIASE domain
3432255428Zn-finger in Ran binding protein and others
2623252929303225219Zinc finger C-x8-C-x5-C-x3-H type (and similar)
111111118B-box zinc finger
31075549447Poly(ADP-ribose) polymerase catalytic domain
3212222216Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
147130206148150156199601,196F-box domain
4211122215Elongation factor 1 gamma, conserved domain
12156687357Calpain family cysteine protease
2232222217Copper fist DNA binding domain
11766668757CRAL/TRIO domain
141920151517135118BTB/POZ domain
51011881113672Ricin-type beta-trefoil lectin domain
121111119Inhibitor of Apoptosis domain
3333335326Voltage gated chloride channel
32516171717133111Caspase domain
2552222525GDSL-like Lipase/Acylhydrolase
2222222115Poly-adenylate binding protein, unique domain
1112231112POLO box duplicated region
112NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
1826191716181718149ABC transporter transmembrane region
512614Integrase core domain
3333333324FAD binding domain
1424414222Condensation domain
111111118S-adenosyl-L-homocysteine hydrolase, NAD binding domain
216111111134HAMP domain
2222222216ribosomal L5P family C-terminus
5555555540Insulinase (Peptidase family M16)
6444457539Dehydrogenase E1 component
111111118Lumazine binding domain
118911111012779Elongation factor G C-terminus
4444444533HMGL-like
4444444432DnaJ central domain
1441111114Starch binding domain
2432223220Ribosomal protein L1p/L10e family
3785555846Cation transporting ATPase, C-terminus
51010881411975Cation transporter/ATPase, N-terminus
1112222112dUTPase
4445556437Aconitase C-terminal domain
3438857341Amino acid kinase family
1112222213N-(5'phosphoribosyl)anthranilate (PRA) isomerase
3854443233Acyl transferase domain
111111129Urease beta subunit
1221111211Dihydrodipicolinate synthetase family
2631292726283631234haloacid dehalogenase-like hydrolase
11111117Glycosyl hydrolases family 2
13911101011111186Glycosyl hydrolases family 18
211111119Proliferating cell nuclear antigen, N-terminal domain
1112221111Adenylosuccinate synthetase
111111118Asparaginase, N-terminal
3343343225Peptidase S24-like
111111118Inorganic pyrophosphatase
4565545438Glycosyl hydrolases family 16
2442222220Glycosyl hydrolases family 15
96588914766NADH:flavin oxidoreductase / NADH oxidase family
1111111183-hydroxyacyl-CoA dehydrogenase, C-terminal domain
3121111212Glycosyl hydrolase family 20, catalytic domain
5545556540HhH-GPD superfamily base excision DNA repair protein
1311111110AIR carboxylase
1032181717121517138GMC oxidoreductase
2322222520Asparagine synthase
22111119Fungal cellulose binding domain
8877778759Septin
111111118EF-1 guanine nucleotide exchange domain
2211112111Homoserine dehydrogenase
4122231318Flavin-binding monooxygenase-like
4333333426tRNA synthetases class I (E and Q), catalytic domain
1111122110tRNA synthetases class I (R)
665111117131079XPG N-terminal domain
898101098870Metallo-beta-lactamase superfamily
11114F5/8 type C domain
4644445637Choline/Carnitine o-acyltransferase
111111118Putative esterase
11Furin-like cysteine rich region
111111118Glycosyl hydrolase family 9
111111118Ferrochelatase
2222222216Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
111112119Arginosuccinate synthase
111111118Electron transfer flavoprotein FAD-binding domain
3333333324RNB domain
2222223217Dioxygenase
5545556540CNH domain
2222222216Diacylglycerol kinase catalytic domain
1411131313161618114Dual specificity phosphatase, catalytic domain
11111111