PFAM Domains • Laccaria

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI), we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. In addition, we are re-sequencing genomes of Laccaria bicolor to get insight into the historical microevolutionary forces driving the genomic evolution of symbiosis-related genes.

Annotations/GenomesLacam2Lacbi2LacbiD101_1TotalAnnotation Description
393943121ATPase family associated with various cellular activities (AAA)
434950142ABC transporter
54413ATP synthase alpha/beta family, nucleotide-binding domain
17161750Elongation factor Tu GTP binding domain
14201448Helix-loop-helix DNA-binding domain
8101230Hsp20/alpha crystallin family
13151543Hsp70 protein
981027KH domain
1113SH2 domain
324038110SH3 domain
279542164Ankyrin repeat
991129ADP-ribosylation factor family
25243685Eukaryotic aspartyl protease
3339Cyclic nucleotide-binding domain
11Cytochrome b(C-terminal)/b6/petD
22Cytochrome b/b6/petB
1113Cytochrome c
14111439Double-stranded RNA binding motif
19182057EF hand
12144Fe-4S binding domain
1113Fibronectin type III domain
9132143Glutathione S-transferase, C-terminal domain
125320Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
11Laminin EGF domain
2226lactate/malate dehydrogenase, NAD binding domain
671023Myosin head (motor domain)
8786101274Cytochrome P450
193217255665Protein kinase domain
12141642Pyridine nucleotide-disulphide oxidoreductase
375355145Ras family
77721Response regulator receiver domain
581023RNase H
837178232RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
77Reverse transcriptase (RNA-dependent DNA polymerase)
1113Copper/zinc superoxide dismutase (SODC)
3339Iron/manganese superoxide dismutases, alpha-hairpin domain
551121Subtilase family
23213175Sugar (and other) transporter
56617Tubulin/FtsZ family, GTPase domain
46515von Willebrand factor type A domain
666377206Zinc finger, C2H2 type
676674207Zinc finger, C3HC4 type (RING finger)
11341661Zinc knuckle
2226Protein-tyrosine phosphatase
514957157short chain dehydrogenase
26313592Zinc-binding dehydrogenase
44412Thiolase, N-terminal domain
55515Beta-ketoacyl synthase, N-terminal domain
474152Fe-2S iron-sulfur cluster binding domain
347Papain family cysteine protease
1113Enolase, C-terminal TIM barrel domain
22Cytochrome C and Quinol oxidase polypeptide I
11Cytochrome C oxidase subunit II, periplasmic domain
813930Glutamine amidotransferase class-I
12131338TCP-1/cpn60 chaperonin family
112ATP synthase A chain
37313Glutamine synthetase, catalytic domain
1113Triosephosphate isomerase
13201548E1-E2 ATPase
25241968Core histone H2A/H2B/H3/H4
2338Copper binding proteins, plastocyanin/azurin family
791026Alpha amylase, catalytic domain
66618Phorbol esters/diacylglycerol binding domain (C1 domain)
44412Bacterial transferase hexapeptide (six repeats)
33410tRNA synthetases class I (I, L, M and V)
14141341Cyclin, N-terminal domain
14151746Carboxylesterase family
44715DNA polymerase family B
34310ATP synthase subunit C
44412C-5 cytosine-specific DNA methylase
11NADH dehydrogenase
333335101Calcineurin-like phosphoesterase
99927Cellulase (glycosyl hydrolase family 5)
55515tRNA synthetases class II (D, K and N)
374144122Mitochondrial carrier protein
15121239Aminotransferase class I and II
781126Phosphoribosyl transferase domain
12131742Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1113Phosphoglycerate kinase
2349Ribosomal protein S4/S9 N-terminal domain
2226Ribosomal protein S12/S23
1113Chaperonin 10 Kd subunit
14181850C2 domain
22242268PH domain
67518bZIP transcription factor
15151545Aldehyde dehydrogenase family
797380232Fungal Zn(2)-Cys(6) binuclear cluster domain
22232570Cytochrome b5-like Heme/Steroid binding domain
33410Oxidoreductase molybdopterin binding domain
88925Oxidoreductase NAD-binding domain
24222369SNF2 family N-terminal domain
2338Ribosomal protein S7p/S5e
22232570Ubiquitin-conjugating enzyme
66618Isocitrate/isopropylmalate dehydrogenase
2248Ribosomal Proteins L2, RNA binding domain
2237Hsp90 protein
3238Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1113Dihydrofolate reductase
1091130Cysteine-rich secretory protein family
1113Ribosomal protein S3, C-terminal domain
28414Eukaryotic-type carbonic anhydrase
33392-oxoacid dehydrogenases acyltransferase (catalytic domain)
66719Aminotransferase class-III
2439Ribosomal protein S19
1113DNA gyrase B
2338Thiamine pyrophosphate enzyme, central domain
3339Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
2136Adenylate and Guanylate cyclase catalytic domain
1113ATP synthase delta (OSCP) subunit
1113Orotidine 5'-phosphate decarboxylase / HUMPS family
2226Indole-3-glycerol phosphate synthase
2226Aromatic amino acid lyase
1113Pyruvate kinase, barrel domain
10101232Kinesin motor domain
323634102DnaJ domain
14141442Proteasome subunit
67922Major intrinsic protein
1113ATP synthase
11133'5'-cyclic nucleotide phosphodiesterase
1113Ribosomal protein L22p/L17e
2226Ribosomal protein L14p/L23e
28212675Ubiquitin family
55515Cofilin/tropomyosin-type actin-binding protein
111314-3-3 protein
2237Alkaline phosphatase
1124Zinc carboxypeptidase
26242878Aldo/keto reductase family
14141644Myb-like DNA-binding domain
55616Forkhead domain
1113Ribosomal protein L16p/L10e
2226Ribosomal protein S14p/S29e
56617FKBP-type peptidyl-prolyl cis-trans isomerase
2114Glutathione peroxidase
1113Calreticulin family
2349Common central domain of tyrosinase
66618Aminotransferase class-V
7119Ribonucleotide reductase, small chain
668093239DEAD/DEAH box helicase
93115133341Helicase conserved C-terminal domain
1113EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
3227Ribosomal protein L23
1124Pyridoxal-dependent decarboxylase, C-terminal sheet domain
1113Ribosomal protein L5
54413Pyridoxal-dependent decarboxylase conserved domain
3339Citrate synthase, C-terminal domain
56617GHMP kinases N terminal domain
56718Biotin carboxylase, N-terminal domain
1113Tryptophan synthase alpha chain
77721Pyridoxal-phosphate dependent enzyme
14141745NUDIX domain
45514pfkB family carbohydrate kinase
36514Glycosyl hydrolases family 28
2215Ribosomal protein L3
2226Ribosomal protein L11, RNA binding domain
77822Histidine phosphatase superfamily (branch 1)
1113Thymidylate synthase
44412ATP synthase alpha/beta chain, C terminal domain
45615Calponin homology (CH) domain
55616Glutamine amidotransferases class-II
2226Ribosomal protein S15
2338Thaumatin family
1113Fructose-1-6-bisphosphatase, N-terminal domain
1113Ribonucleotide reductase, all-alpha domain
2226Ribosomal protein S2
43310SRF-type transcription factor (DNA-binding and dimerisation domain)
12121236GATA zinc finger
24232471Amino acid permease
11Bacterial regulatory proteins, crp family
58619Prolyl oligopeptidase family
1113Ribosomal protein L30p/L7e
98926Histidine phosphatase superfamily (branch 2)
1113Respiratory-chain NADH dehydrogenase, 30 Kd subunit
58619Aconitase family (aconitate hydratase)
2338Glycosyl hydrolases family 17
2226Ribosomal protein S5, N-terminal domain
2226Nucleoside diphosphate kinase
3339Tetraspanin family
52411Galactoside-binding lectin
2226Ribosomal protein S10p/S20e
48820Arrestin (or S-antigen), N-terminal domain
1113Phosphoglucose isomerase
1113Carbohydrate phosphorylase
1113SecY translocase
25310Respiratory-chain NADH dehydrogenase, 49 Kd subunit
2226Ribosomal protein L6
68620Polyprenyl synthetase
88824Dynamin family
1225Transcription factor TFIID (or TATA-binding protein, TBP)
45312Rieske [2Fe-2S] domain
33Proton-conducting membrane transporter
88824Biotin-requiring enzyme
2226Ribosomal protein S17
2226Hydroxymethylglutaryl-coenzyme A reductase
3238FGGY family of carbohydrate kinases, N-terminal domain
88824Enoyl-CoA hydratase/isomerase
2226Ribosomal protein S9/S16
2327Transcription factor TFIIB repeat
77923Cytidine and deoxycytidylate deaminase zinc-binding region
1113Molybdopterin oxidoreductase
8211039Chromo (CHRromatin Organisation MOdifier) domain
54615Phosphatidylinositol-specific phospholipase C, Y domain
54514Phosphatidylinositol-specific phospholipase C, X domain
44513D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
56516Malic enzyme, N-terminal domain
11136-phosphogluconate dehydrogenase, C-terminal domain
9131234Multicopper oxidase
88925WW domain
2226Ribosomal RNA adenine dimethylase
231221276728WD domain, G-beta repeat
43411Heavy-metal-associated domain
3339Adenylate kinase
2226Phosphoglucomutase/phosphomannomutase, C-terminal domain
1113Ribosomal protein S8
2237Ribosomal protein S11
67619LIM domain
3339Regulator of chromosome condensation (RCC1) repeat
2226Ribosomal protein S13/S18
22NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
2226chorismate binding enzyme
4441260s Acidic ribosomal protein
46515Prenyltransferase and squalene oxidase repeat
66618Protein kinase C terminal domain
1113Single-strand binding protein family
1113S-adenosylmethionine synthetase, N-terminal domain
88824Acyl-CoA dehydrogenase, C-terminal domain
20161753Ubiquitin carboxyl-terminal hydrolase
1113Ribosomal protein L36
3339Ribonuclease T2 family
54413HSF-type DNA-binding
2226SRP54-type protein, GTPase domain
1113Urease alpha-subunit, N-terminal domain
77822Serine carboxypeptidase
88824Phosphatidylinositol 3- and 4-kinase
2226Transketolase, thiamine diphosphate binding domain
112WHEP-TRS domain
4228Inositol monophosphatase family
2237Isocitrate lyase family
1113Serine hydroxymethyltransferase
2226Iron-containing alcohol dehydrogenase
2226Ribosomal protein L10
1081028KOW motif
1113Ribosomal protein L34
1236RF-1 domain
2226Sodium:solute symporter family
1113Imidazoleglycerol-phosphate dehydratase
1113DNA polymerase family A
1113IMP dehydrogenase / GMP reductase domain
1113Glucose-6-phosphate dehydrogenase, NAD binding domain
1291233Protein phosphatase 2C
3339Nucleotidyl transferase
47920Carbonic anhydrase
1113Phosphoribulokinase / Uridine kinase family
98926Fatty acid desaturase
66921MutS domain V
1113Delta-aminolevulinic acid dehydratase
2226Arginase family
66618MCM P-loop domain
1225Squalene/phytoene synthase
11111133FHA domain
11NADH-ubiquinone/plastoquinone oxidoreductase chain 6
20293281AMP-binding enzyme
184934101G-protein alpha subunit
19162055HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
11Cytochrome c oxidase subunit III
44412His Kinase A (phospho-acceptor) domain
2237Armadillo/beta-catenin-like repeat
517368192Tetratricopeptide repeat
2226Ion transport protein
1113DNA gyrase/topoisomerase IV, subunit A
112VPR/VPX protein
11121437BRCA1 C Terminus (BRCT) domain
67619Glycosyl transferases group 1
3339Glycosyl transferase family 2
112SAM domain (Sterile alpha motif)
44412linker histone H1 and H5 family
1113Ribosomal protein L7/L12 C-terminal domain
1113Urease, gamma subunit
65718Phosphopantetheine attachment site
3227Formyl transferase
109928Metallopeptidase family M24
17161851Leucine Rich Repeat
25202671alpha/beta hydrolase fold
3339RNA polymerase Rpb2, domain 6
57618PB1 domain
2226Staphylococcal nuclease homologue
10111233Rab-GTPase-TBC domain
1113Tudor domain
1225WH1 domain
44614Zinc finger, ZZ type
1113HRDC domain
991028CBS domain
2226Ribosomal protein L13
2226Ribosomal protein L4/L1 family
1113Clp protease
34411S1 RNA binding domain
1124HIUase/Transthyretin family
44412AhpC/TSA family
74415tRNA synthetases class I (W and Y)
1113UvrD/REP helicase N-terminal domain
44412Rhodanese-like domain
4228Universal stress protein family
20282270Acetyltransferase (GNAT) family
1113SecE/Sec61-gamma subunits of protein translocation complex
1113C-terminal regulatory domain of Threonine dehydratase
2226AIR synthase related protein, N-terminal domain
66618tRNA synthetase class II core domain (G, H, P, S and T)
22Phage integrase family
25512Tetrapyrrole (Corrin/Porphyrin) Methylases
1113Glycosyl transferase family, a/b domain
1113Class II Aldolase and Adducin N-terminal domain
43310Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
78621Fes/CIP4, and EFC/F-BAR homology domain
45615IQ calmodulin-binding motif
2226Phosphoinositide 3-kinase family, accessory domain (PIK domain)
44412Phospholipase D Active site motif
1113Regulator of G protein signaling domain
44412GTPase-activator protein for Ras-like GTPase
87924RasGEF domain
98926RasGEF N-terminal motif
13131440RhoGAP domain
16161850RhoGEF domain
44412SPRY domain
53412RNA polymerase Rpb1, domain 2
1113Guanylate kinase
44412Gelsolin repeat
810927UBA/TS-N domain
55616HECT-domain (ubiquitin-transferase)
2226Helix-hairpin-helix motif
2237MSP (Major sperm protein) domain
97925Ribonuclease III domain
2226Region in Clathrin and VPS
43411RanBP1 domain
2226PPIC-type PPIASE domain
25512Zn-finger in Ran binding protein and others
29303291Zinc finger C-x8-C-x5-C-x3-H type (and similar)
1113B-box zinc finger
54918Poly(ADP-ribose) polymerase catalytic domain
2226Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
150156199505F-box domain
1225Elongation factor 1 gamma, conserved domain
68721Calpain family cysteine protease
2226Copper fist DNA binding domain
66820CRAL/TRIO domain
15171345BTB/POZ domain
8111332Ricin-type beta-trefoil lectin domain
1113Inhibitor of Apoptosis domain
33511Voltage gated chloride channel
17171347Caspase domain
2226GDSL-like Lipase/Acylhydrolase
2226Poly-adenylate binding protein, unique domain
2316POLO box duplicated region
11NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
16181751ABC transporter transmembrane region
66Integrase core domain
3339FAD binding domain
4149Condensation domain
1113S-adenosyl-L-homocysteine hydrolase, NAD binding domain
111113HAMP domain
2226ribosomal L5P family C-terminus
55515Insulinase (Peptidase family M16)
45716Dehydrogenase E1 component
1113Lumazine binding domain
11101233Elongation factor G C-terminus
44412DnaJ central domain
1113Starch binding domain
2237Ribosomal protein L1p/L10e family
55515Cation transporting ATPase, C-terminus
8141133Cation transporter/ATPase, N-terminus
55616Aconitase C-terminal domain
85720Amino acid kinase family
2226N-(5'phosphoribosyl)anthranilate (PRA) isomerase
44311Acyl transferase domain
1113Urease beta subunit
1113Dihydrodipicolinate synthetase family
26283690haloacid dehalogenase-like hydrolase
1113Glycosyl hydrolases family 2
10111132Glycosyl hydrolases family 18
1113Proliferating cell nuclear antigen, N-terminal domain
2215Adenylosuccinate synthetase
1113Asparaginase, N-terminal
34310Peptidase S24-like
1113Inorganic pyrophosphatase
54514Glycosyl hydrolases family 16
2226Glycosyl hydrolases family 15
891431NADH:flavin oxidoreductase / NADH oxidase family
11133-hydroxyacyl-CoA dehydrogenase, C-terminal domain
1113Glycosyl hydrolase family 20, catalytic domain
55616HhH-GPD superfamily base excision DNA repair protein
1113AIR carboxylase
17121544GMC oxidoreductase
2226Asparagine synthase
1113Fungal cellulose binding domain
1113EF-1 guanine nucleotide exchange domain
1124Homoserine dehydrogenase
2316Flavin-binding monooxygenase-like
3339tRNA synthetases class I (E and Q), catalytic domain
1225tRNA synthetases class I (R)
11171341XPG N-terminal domain
109827Metallo-beta-lactamase superfamily
44513Choline/Carnitine o-acyltransferase
1113Putative esterase
1113Glycosyl hydrolase family 9
2226Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1214Arginosuccinate synthase
1113Electron transfer flavoprotein FAD-binding domain
3339RNB domain
55616CNH domain
2226Diacylglycerol kinase catalytic domain
13161645Dual specificity phosphatase, catalytic domain
1113MyTH4 domain
66618P21-Rho-binding domain
12141743PX domain
43613Ras association (RalGDS/AF-6) domain
46515UBX domain
66517VHS domain
1113Phosphoinositide 3-kinase C2
2226DAHP synthetase I family
3339Carbon-nitrogen hydrolase
1113Geminivirus Rep catalytic domain
1113Prephenate dehydratase
55616Pumilio-family RNA binding repeat
76821Histone-like transcription factor (CBF/NF-Y) and archaeal histone
1214Pterin binding enzyme
1113ER lumen protein retaining receptor
2226tRNA N6-adenosine threonylcarbamoyltransferase
1113Histidinol dehydrogenase
33410impB/mucB/samB family
1113Ribosomal L15
1124Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
1113Ribosomal prokaryotic L21 protein
1124Ribosomal L28 family
1113Ribosomal L29 protein
1113Ribosomal L39 protein
1113Ribosomal S17
1113Ribulose-phosphate 3 epimerase family
1113Translationally controlled tumour protein
2226RNA pseudouridylate synthase
67821Histone deacetylase domain
2439POT family
26816PWWP domain
20292978SET domain
2226Isochorismatase family
2237Permease family
1113Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
15382679XPG I-region
1214Cation-independent mannose-6-phosphate receptor repeat
24511Cytosol aminopeptidase family, catalytic domain
11136,7-dimethyl-8-ribityllumazine synthase
1113Ribosomal protein S16
3339Acyl CoA binding protein
791632Cullin family
1113Elongation factor TS
36615FAD binding domain
68822O-methyltransferase domain
56617EamA-like transporter family
77721ThiF family
1113Ribosomal family S4e
2259Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
77822Ammonium Transporter Family
57517Sulfate permease family
1113MATH domain
2226Dehydratase family
3339Transaldolase/Fructose-6-phosphate aldolase
3339Mechanosensitive ion channel
1113GTP cyclohydrolase II
11133,4-dihydroxy-2-butanone 4-phosphate synthase
93416Adaptor complexes medium subunit family
4116Dipeptidyl peptidase IV (DPP IV) N-terminal region
11NB-ARC domain
2248Glycosyl hydrolase family 3 N terminal domain
1113Ribosomal protein L44
1113DNA-dependent RNA polymerase
1113Glycosyl transferase family 4
1214HCO3- transporter family
2327Nucleosome assembly protein (NAP)
1315GMP synthase C terminal domain
2327Phage lysozyme
37616Adenosine/AMP deaminase
44513Oxidoreductase FAD-binding domain
1214Thioesterase domain
2226Histidine biosynthesis protein
84416Glycosyltransferase family 20
1113UDP-glucose/GDP-mannose dehydrogenase family, central domain
2428Carbamoyl-phosphate synthase small chain, CPSase domain
1113Diguanylate cyclase, GGDEF domain
3238Probable molybdopterin binding domain
43411Sec1 family
2226GDP dissociation inhibitor
87924Sodium/hydrogen exchanger family
2226RNA polymerase Rpb3/RpoA insert domain
44412Initiation factor 2 subunit family
11PQQ enzyme repeat
2226Electron transfer flavoprotein domain
1113Ribosomal S3Ae family
1113Ribosomal L27 protein
11Ribosomal L40e family
17311TatD related DNase
1113Inhibitor of apoptosis-promoting Bax1
1113Eukaryotic DNA topoisomerase I, catalytic core
43310Dynamin central region
23386-O-methylguanine DNA methyltransferase, DNA binding domain
2226Carboxyl transferase domain
3339UbiA prenyltransferase family
32510Endoribonuclease L-PSP
1113Phosphorylase superfamily
1113Mannose-6-phosphate isomerase
11101031Cys/Met metabolism PLP-dependent enzyme
57517Glycosyl hydrolases family 31
1113NADH ubiquinone oxidoreductase, 20 Kd subunit
10111738ABC-2 type transporter
2226Amino-transferase class IV
44412CDP-alcohol phosphatidyltransferase
112Calpain large subunit, domain III
54413ATP dependent DNA ligase domain
3339FMN-dependent dehydrogenase
1113Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
22263-beta hydroxysteroid dehydrogenase/isomerase family
2114Glycosyl hydrolases family 38 N-terminal domain
2226Nitrite and sulphite reductase 4Fe-4S domain
1113Ribosomal protein S18
1113Clathrin light chain
1113Galactose-1-phosphate uridyl transferase, N-terminal domain
44412Ubiquitin carboxyl-terminal hydrolase, family 1
1113Ribosomal protein S19e
1124Ribosomal protein S6e
43310Transcription factor S-II (TFIIS)
11Arthropod defensin
1146Omp85 superfamily domain
3339emp24/gp25L/p24 family/GOLD
1113NifU-like domain
1113Cyclin-dependent kinase regulatory subunit
1113F-actin capping protein, beta subunit
2237Fructose-bisphosphate aldolase class-II
3339Semialdehyde dehydrogenase, NAD binding domain
2327DNA mismatch repair protein, C-terminal domain
1113Dephospho-CoA kinase
1113MAPEG family
1113G10 protein
1113Heme oxygenase
1225Succinate dehydrogenase/Fumarate reductase transmembrane subunit
1113DNA topoisomerase
2114Glucose inhibited division protein A
1124Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
2226RNA 3'-terminal phosphate cyclase
678213' exoribonuclease family, domain 1
1113tRNA pseudouridine synthase D (TruD)
1113Coenzyme A transferase
45514SPFH domain / Band 7 family
3339Cytidylyltransferase family
13181647GDA1/CD39 (nucleoside phosphatase) family
1113GNS1/SUR4 family
63615Hydroxymethylglutaryl-coenzyme A synthase N terminal
2226Inosine-uridine preferring nucleoside hydrolase
1113Ribosomal protein L21e
1113Ribosomal protein L36e
1113Ribosomal protein L6e
3339Phosphatidylethanolamine-binding protein
3249RIO1 family
123Alanine racemase, N-terminal domain
1438Uncharacterized protein family UPF0016
1113Putative RNA methylase family UPF0020
2226PP-loop family
1113Shwachman-Bodian-Diamond syndrome (SBDS) protein
1113SNO glutamine amidotransferase family
1113Translation initiation factor 1A / IF-1
2327Copper amine oxidase, enzyme domain
2226Dihydroorotate dehydrogenase
1113Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
112Glycosyl hydrolases family 25
1225GPR1/FUN34/yaaH family
9121334Fungal hydrophobin
1113Macrophage migration inhibitory factor (MIF)
333916S rRNA methyltransferase RsmB/F
1113RNA polymerase Rpb5, C-terminal domain
1113RNA polymerase Rpb6
44412RNA polymerase Rpb3/Rpb11 dimerisation domain
1113RNA polymerases N / 8 kDa subunit
1113Peptidyl-tRNA hydrolase
1113Ribosomal protein L17
1113Ribosomal protein L31e
1113Ribosomal protein L34e
1113Ribosomal protein S28e
2226Ribosomal protein S8e
2237Shikimate kinase
2226Uncharacterized protein family UPF0029
44513Dihydrouridine synthase (Dus)
1113Uroporphyrinogen decarboxylase (URO-D)
1113ubiE/COQ5 methyltransferase family
1113NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
1113Beta-eliminating lyase
1113Adenylate cyclase associated (CAP) N terminal
281020Casein kinase II regulatory subunit
1113Cytochrome c oxidase subunit Vb
54413Clathrin adaptor complex small chain
1214Coproporphyrinogen III oxidase
1113Dynein light chain type 1
2237Ergosterol biosynthesis ERG4/ERG24 family
1113DNA/RNA non-specific endonuclease
1113GTP cyclohydrolase I
66618HIT domain
47314Indoleamine 2,3-dioxygenase
1113Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain
11Sodium:alanine symporter family
86923Oxysterol-binding protein
1113Phosphomannose isomerase type I
35412Protein prenyltransferase alpha subunit repeat
66618Pyridoxamine 5'-phosphate oxidase
1113Membrane dipeptidase (Peptidase family M19)
1113Ribosomal protein L19
2226Ribosomal protein L24e
1113Ribosomal protein L35Ae
1112932Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
1113Ribosomal protein S21e
1113Ribosomal protein S7e
3339Translation initiation factor SUI1
1326Putative undecaprenyl diphosphate synthase
1113Carbohydrate kinase
1113Thioredoxin-like [2Fe-2S] ferredoxin
1113SAICAR synthetase
1113Xylose isomerase-like TIM barrel
2226Alanine dehydrogenase/PNT, C-terminal domain
1113Aldose 1-epimerase
1113Chorismate synthase
3238Cytochrome c/c1 heme lyase
18172358FAD dependent oxidoreductase
1113F-actin capping protein alpha subunit
1113Formate--tetrahydrofolate ligase
1113Malate synthase
1113Ribosomal protein L19e
1113Ribosomal protein S24e
1113Ribosomal protein S26e
1135Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold
11137,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
1113Phosphoenolpyruvate carboxykinase
1113Ribosomal protein L13e
1113Telomere recombination
1113Glycosyl hydrolases family 35
45514CAP-Gly domain
2114Creatinase/Prolidase N-terminal domain
1113DSBA-like thioredoxin domain
64515Peroxidase, family 2
1113mRNA capping enzyme, catalytic domain
88824OB-fold nucleic acid binding domain
7121130Kelch motif
1113Ribonuclease HII
66618FYVE zinc finger
55515Sec7 domain
16172053NAD dependent epimerase/dehydratase family
1225Porphobilinogen deaminase, dipyromethane cofactor binding domain
1113SIS domain
2226ARID/BRIGHT DNA binding domain
1113Chromo shadow domain
1113Clathrin propeller repeat
88824JAB1/Mov34/MPN/PAD-1 ubiquitin protease
15172052PCI domain
54211Astacin (Peptidase family M12A)
1113tRNA synthetases class I (C) catalytic domain
55616Oxidoreductase family, NAD-binding Rossmann fold
2226tRNA synthetases class II core domain (F)
1113tRNA synthetases class II (A)
44412Putative GTPase activating protein for Arf
2226tRNA pseudouridine synthase
2226ENTH domain
11Jacalin-like lectin domain
1113Reprolysin (M12B) family zinc metalloprotease
1225NF-X1 type zinc finger
16181751LSM domain
3339R3H domain
66618BAH domain
2226AN1-like Zinc finger
1113Peptidase family M13
2226Peptidase family M3
3339Peptidase family M1 domain
2226Peptidase family M41
3339Peptidase family M48
1113Acetohydroxy acid isomeroreductase, catalytic domain
1113Low molecular weight phosphotyrosine protein phosphatase
91313MAGE family
2226Eukaryotic porin
1113Transglycosylase SLT domain
1113GRIP domain
1113Skp1 family, dimerisation domain
43310PUA domain
1124Class-II DAHP synthetase family
43411LysM domain
46717S4 domain
1113PWI domain
2226Proprotein convertase P-domain
12171443IBR domain, a half RING-finger domain
1113Type I 3-dehydroquinase
1113Shikimate / quinate 5-dehydrogenase
43310Transmembrane amino acid transporter protein
1113Frataxin-like domain
1113GXGXG motif
78823FAD binding domain
1113V-type ATPase 116kDa subunit family
46717Glycosyl transferase family 8
1113Phosphoribosyl-AMP cyclohydrolase
1113Phosphoribosyl-ATP pyrophosphohydrolase
38819Phosphatidylinositol-4-phosphate 5-Kinase
2226Phosphoadenosine phosphosulfate reductase family
2226TruB family pseudouridylate synthase (N terminal domain)
1113Respiratory-chain NADH dehydrogenase 51 Kd subunit
2226ATP-NAD kinase
2226Iron-sulphur cluster biosynthesis
9111232Polysaccharide deacetylase
78621DHHC palmitoyltransferase
791026Glycosyl hydrolase family 47
88925PPR repeat
1113Adenosylmethionine decarboxylase
1214GIY-YIG catalytic domain
67720CorA-like Mg2+ transporter protein
791026Cation efflux family
78722Peptidase family M20/M25/M40
55515DnaJ C terminal domain
2226Fumarylacetoacetate (FAA) hydrolase family
11Pyruvate ferredoxin/flavodoxin oxidoreductase
1124Spermine/spermidine synthase domain
14141644FAD binding domain
1113Natural resistance-associated macrophage protein
7161437PAP2 superfamily
2327Aminomethyltransferase folate-binding domain
3339MaoC like domain
35816Adenylylsulphate kinase
77721G-patch domain
1113Putative tRNA binding domain
2226GAF domain
1113NifU-like N terminal domain
66820Flavin containing amine oxidoreductase
33511Cyclin M transmembrane N-terminal domain
1113Glycine cleavage H-protein
1113Ribosomal protein S27a
1211932Adaptin N terminal region
1113Protein phosphatase 2A regulatory B subunit (B56 family)
1113I/LWEQ domain
694193'-5' exonuclease
1124Flavin reductase like domain
1135Proline dehydrogenase
44513MutS domain I
1113Peptide methionine sulfoxide reductase
1113Hpt domain
1113Ribosomal protein L35
2125Choline/ethanolamine kinase
1113ATP phosphoribosyltransferase
45817Phosphotransferase enzyme family
1113SelR domain
54615Chitin synthase
1113Conserved region in glutamate synthase
33394'-phosphopantetheinyl transferase superfamily
1113Peptidase C13 family
3339Eukaryotic initiation factor 4E
1113Ribosomal protein L32
2428Myo-inositol-1-phosphate synthase
2226Macro domain
2226Type I phosphodiesterase / nucleotide pyrophosphatase
1113Ribosomal protein S27
2338Glycosyl hydrolase family 12
1113Metalloenzyme superfamily
55616Proteolipid membrane potential modulator
1113SOR/SNZ family
2226Riboflavin kinase
45413Rhomboid family
56718Sodium/calcium exchanger protein
1113Queuine tRNA-ribosyltransferase
3339UTP--glucose-1-phosphate uridylyltransferase
2114Transcriptional regulator
44412Smr domain
1113IPP transferase
3339Cobalamin-independent synthase, Catalytic domain
3339BolA-like protein
1225Ham1 family
2338FtsJ-like methyltransferase
1113Quinolinate phosphoribosyl transferase, C-terminal domain
1113Nucleoside transporter
43512Patatin-like phospholipase
891128Dienelactone hydrolase family
57517STAS domain
1113Poly A polymerase head domain
1113tRNA (Guanine-1)-methyltransferase
1113Importin beta binding domain
1113Toprim domain
564762165MYND finger
1113Acyl-CoA oxidase
2226Sodium Bile acid symporter family
11133-dehydroquinate synthase
12182050Lipase (class 3)
112Ribosome recycling factor
2215Divalent cation transporter
2114Na+ dependent nucleoside transporter N-terminus
1113UreD urease accessory protein
1247Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A
1113Ribosomal L22e protein family
1113Ribosomal L27e protein family
1113Ribosomal L28e protein family
1113Ribosomal L29e protein family
1113Ribosomal L37ae protein family
1113Ribosomal L38e protein family
1113Ribosomal L32p protein family
1113NIF3 (NGG1p interacting factor 3)
1113Alternative oxidase
1124DeoC/LacD family aldolase
3339Glycolipid 2-alpha-mannosyltransferase
910928Ferric reductase like transmembrane component
3339snoRNA binding domain, fibrillarin
2349Surp module
63312AICARFT/IMPCHase bienzyme
11135-formyltetrahydrofolate cyclo-ligase family