PFAM Domains • Typhula sp. TRa3160C v1.0
Annotations/GenomesAmysub1Anoalb1Anobom1Anomyc1PleosPC15_2Plicr1Plucer1Ptegra1Radcon1TyphTRa3160C_1TotalAnnotation Description
PFAMs
8,5498,7989,4598,9837,9728,1238,8109,52511,2008,76190,180
211157 transmembrane receptor (rhodopsin family)
39364635474144404337408ATPase family associated with various cellular activities (AAA)
35443837394751485049438ABC transporter
444444444642ATP synthase alpha/beta family, nucleotide-binding domain
112EGF-like domain
14151415151514161616150Elongation factor Tu GTP binding domain
1312111211111391213117Helix-loop-helix DNA-binding domain
866478639562Hsp20/alpha crystallin family
10891011923101913122Hsp70 protein
789889887779KH domain
11Ribulose bisphosphate carboxylase large chain, catalytic domain
1113SH2 domain
13161417282831151316191SH3 domain
11101111111211101311111Actin
716111822274621525225Ankyrin repeat
7777878771075ADP-ribosylation factor family
29243627243822163715268Eukaryotic aspartyl protease
333333334432Cyclic nucleotide-binding domain
21111111110Cytochrome c
479668141214686Double-stranded RNA binding motif
12191827269EF hand
11134Fe-4S binding domain
112116Fibronectin type III domain
11Globin
77548117182811106Glutathione S-transferase, C-terminal domain
111221211214Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
11Hemopexin
11712101015138119106Homeodomain
112Laminin EGF domain
222232222221lactate/malate dehydrogenase, NAD binding domain
655655655553Myosin head (motor domain)
1121461281511439015869139741,210Cytochrome P450
1421861641521551771771732371571,720Protein kinase domain
89117201316111211118Pyridine nucleotide-disulphide oxidoreductase
24272525262729272529264Ras family
888810712112015107Response regulator receiver domain
266311710106465RNase H
59606460676869586164630RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
11111122111Copper/zinc superoxide dismutase (SODC)
222222322322Iron/manganese superoxide dismutases, alpha-hairpin domain
13101412931232112109Subtilase family
43365340273427383731366Sugar (and other) transporter
91011915101012918113Thioredoxin
555565555652Tubulin/FtsZ family, GTPase domain
143614von Willebrand factor type A domain
18191916575576223423339Zinc finger, C2H2 type
551165973748119261Zinc finger, C3HC4 type (RING finger)
541174421165129134Zinc knuckle
222222323424Protein-tyrosine phosphatase
657969868013069667845767short chain dehydrogenase
45363135416836435923417Zinc-binding dehydrogenase
555545557551Thiolase, N-terminal domain
327722223434Beta-ketoacyl synthase, N-terminal domain
1121333111172Fe-2S iron-sulfur cluster binding domain
111111111110Enolase, C-terminal TIM barrel domain
22Cytochrome C and Quinol oxidase polypeptide I
11Cytochrome C oxidase subunit II, periplasmic domain
988878888880Glutamine amidotransferase class-I
10111212101010101010105TCP-1/cpn60 chaperonin family
354433333435Glutamine synthetase, catalytic domain
111111111110Triosephosphate isomerase
17141713131116161618151E1-E2 ATPase
17191617171717181518171Core histone H2A/H2B/H3/H4
12216Copper binding proteins, plastocyanin/azurin family
789891371491094Alpha amylase, catalytic domain
454436655446Phorbol esters/diacylglycerol binding domain (C1 domain)
443455433439Bacterial transferase hexapeptide (six repeats)
444423344436tRNA synthetases class I (I, L, M and V)
1110111191111131812117Cyclin, N-terminal domain
117221026241828638217Carboxylesterase family
444444444440DNA polymerase family B
333334344333ATP synthase subunit C
3931110819411381Peroxidase
111138946438Beta-lactamase
444453444339C-5 cytosine-specific DNA methylase
112NADH dehydrogenase
27202324273132222322251Calcineurin-like phosphoesterase
1415211413913192317158Cellulase (glycosyl hydrolase family 5)
755555555653tRNA synthetases class II (D, K and N)
34364036343938383737369Mitochondrial carrier protein
1113recA bacterial DNA recombination protein
15161417131814161319155Aminotransferase class I and II
344476643445Phosphoribosyl transferase domain
12151214101213141413129Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
211111111111Phosphoglycerate kinase
222222222220Ribosomal protein S4/S9 N-terminal domain
222222222220Ribosomal protein S12/S23
1111111119Chaperonin 10 Kd subunit
10131714181628121314155C2 domain
7866181722795105PH domain
12101110666991089bZIP transcription factor
18191722191715221917185Aldehyde dehydrogenase family
47575458538870728478661Fungal Zn(2)-Cys(6) binuclear cluster domain
17222623222823242224231Cytochrome b5-like Heme/Steroid binding domain
3421134119Oxidoreductase molybdopterin binding domain
8676876109976Oxidoreductase NAD-binding domain
30332923262733242224271SNF2 family N-terminal domain
222222222220Ribosomal protein S7p/S5e
22212122202127212123219Ubiquitin-conjugating enzyme
677556655557Isocitrate/isopropylmalate dehydrogenase
222221222219Ribosomal Proteins L2, RNA binding domain
222222223221Hsp90 protein
222222222220Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
111111111110Dihydrofolate reductase
325Chitin recognition protein
122253688340Cysteine-rich secretory protein family
111111111110Ribosomal protein S3, C-terminal domain
121322221319Cupin
112239Annexin
1416Eukaryotic-type carbonic anhydrase
4333433333322-oxoacid dehydrogenases acyltransferase (catalytic domain)
352521231327Catalase
111111111312Disintegrin
244231622UDP-glucoronosyl and UDP-glucosyl transferase
555555565551Aminotransferase class-III
222222222220Ribosomal protein S19
111111111110DNA gyrase B
243353322229Thiamine pyrophosphate enzyme, central domain
333333343432Lyase
121212122216Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
11Sodium:neurotransmitter symporter family
111211111111Adenylate and Guanylate cyclase catalytic domain
111111111110ATP synthase delta (OSCP) subunit
111111111110Orotidine 5'-phosphate decarboxylase / HUMPS family
111111111110Indole-3-glycerol phosphate synthase
113122121216Aromatic amino acid lyase
111111111211Pyruvate kinase, barrel domain
91291191399109100Kinesin motor domain
31283229293432283027300DnaJ domain
14141414141414141414140Proteasome subunit
434374533541Major intrinsic protein
111111111110ATP synthase
423233329233Glycosyl hydrolase family 1
1111111111103'5'-cyclic nucleotide phosphodiesterase
211111111111Profilin
222212222219Ribosomal protein L22p/L17e
222222222220Ribosomal protein L14p/L23e
13142119161332141618176Ubiquitin family
645555565551Cofilin/tropomyosin-type actin-binding protein
22222222222014-3-3 protein
5151315Alkaline phosphatase
111111151720Zinc carboxypeptidase
44374844425341477134461Aldo/keto reductase family
1079815121266792Myb-like DNA-binding domain
555555444850Forkhead domain
1214Glycosyl hydrolases family 32 N-terminal domain
223221122320Ribosomal protein L16p/L10e
222222222220Ribosomal protein S14p/S29e
333383353438FKBP-type peptidyl-prolyl cis-trans isomerase
111111111110Glutathione peroxidase
2215
11Dehydrin
633466564447Flavodoxin
111111111110Calreticulin family
241044810129568Common central domain of tyrosinase
89891167109885Aminotransferase class-V
223228323229Ribonucleotide reductase, small chain
52597254557161516160596DEAD/DEAH box helicase
76931037992112102768477894Helicase conserved C-terminal domain
2111117Fructose-bisphosphate aldolase class-I
111111111110EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
222322222221Ribosomal protein L23
111111111110Pyridoxal-dependent decarboxylase, C-terminal sheet domain
111111111110Ribosomal protein L5
354555533341Pyridoxal-dependent decarboxylase conserved domain
845433333440Citrate synthase, C-terminal domain
557556555553GHMP kinases N terminal domain
657667656559Biotin carboxylase, N-terminal domain
111111122112Tryptophan synthase alpha chain
7677788108977Pyridoxal-phosphate dependent enzyme
15151716151516151617157NUDIX domain
444455555445pfkB family carbohydrate kinase
3575610637254Glycosyl hydrolases family 28
222222322221Ribosomal protein L3
222222222220Ribosomal protein L11, RNA binding domain
67861081088677Histidine phosphatase superfamily (branch 1)
111111111110Thymidylate synthase
235Lipoxygenase
444444444642ATP synthase alpha/beta chain, C terminal domain
444444454441Calponin homology (CH) domain
11Bacterial dnaA protein
222255522330Glutamine amidotransferases class-II
222222222220Ribosomal protein S15
124236111511156Thaumatin family
111111111110Fructose-1-6-bisphosphatase, N-terminal domain
111111111110Ribonucleotide reductase, all-alpha domain
222212222219Ribosomal protein S2
221222322321SRF-type transcription factor (DNA-binding and dimerisation domain)
1081099109153014124GATA zinc finger
651362027211159123Amino acid permease
648785778767Prolyl oligopeptidase family
222211122217Ribosomal protein L30p/L7e
107108131010612995Histidine phosphatase superfamily (branch 2)
111111111110Respiratory-chain NADH dehydrogenase, 30 Kd subunit
448545444446Aconitase family (aconitate hydratase)
1434321035136Glycosyl hydrolase family 10
111111332216Glycosyl hydrolases family 17
222222222220Ribosomal protein S5, N-terminal domain
222322222120Nucleoside diphosphate kinase
224332354533Tetraspanin family
213Galactoside-binding lectin
222222223322Ribosomal protein S10p/S20e
323343223429Arrestin (or S-antigen), N-terminal domain
111212111112Phosphoglucose isomerase
121111111111Carbohydrate phosphorylase
111131111112SecY translocase
111311111112Respiratory-chain NADH dehydrogenase, 49 Kd subunit
222222222220Ribosomal protein L6
473844455549Polyprenyl synthetase
222222222119Hexokinase
127106679710680Dynamin family
113212111114Transcription factor TFIID (or TATA-binding protein, TBP)
334323433432Rieske [2Fe-2S] domain
11111117Phytochrome region
11Proton-conducting membrane transporter
9887148978785Biotin-requiring enzyme
211111111111Phosphofructokinase
122222222219Ribosomal protein S17
11611111114Hydroxymethylglutaryl-coenzyme A reductase
433335333333FGGY family of carbohydrate kinases, N-terminal domain
11Sodium:dicarboxylate symporter family
78881098109885Enoyl-CoA hydratase/isomerase
222222222220Ribosomal protein S9/S16
222223222221Transcription factor TFIIB repeat
667767656864Cytidine and deoxycytidylate deaminase zinc-binding region
111111111110Molybdopterin oxidoreductase
6988221915796109Chromo (CHRromatin Organisation MOdifier) domain
222232332223Phosphatidylinositol-specific phospholipase C, Y domain
343442454538Phosphatidylinositol-specific phospholipase C, X domain
846557635554D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
433333322228Malic enzyme, N-terminal domain
2111211111126-phosphogluconate dehydrogenase, C-terminal domain
1694712610162310113Multicopper oxidase
8108107121289892WW domain
232222222120Ribosomal RNA adenine dimethylase
1201221431251401372101371471101,391WD domain, G-beta repeat
333343333230Heavy-metal-associated domain
333333333330Adenylate kinase
232321132322Phosphoglucomutase/phosphomannomutase, C-terminal domain
222211122217Ribosomal protein S8
222224322122Ribosomal protein S11
766656665659LIM domain
354533343235Regulator of chromosome condensation (RCC1) repeat
222222222220Ribosomal protein S13/S18
222222222220chorismate binding enzyme
23333333332960s Acidic ribosomal protein
454554445444Prenyltransferase and squalene oxidase repeat
534368755652Protein kinase C terminal domain
111111111211Single-strand binding protein family
111111111110S-adenosylmethionine synthetase, N-terminal domain
1010101091110101010100Bromodomain
7101210101110812898Acyl-CoA dehydrogenase, C-terminal domain
15151515161414151516150Ubiquitin carboxyl-terminal hydrolase
1111111119Ribosomal protein L36
32424532227Ribonuclease T2 family
4464641044450HSF-type DNA-binding
222222222220SRP54-type protein, GTPase domain
111111112111Urease alpha-subunit, N-terminal domain
131410101214114287123Serine carboxypeptidase
888888789880Phosphatidylinositol 3- and 4-kinase
222223222423Transketolase, thiamine diphosphate binding domain
1225Glycosyl hydrolases family 11
1113WHEP-TRS domain
222222222220Inositol monophosphatase family
555544475650Glutaredoxin
222263522228Isocitrate lyase family
111111111110Serine hydroxymethyltransferase
223222222120Iron-containing alcohol dehydrogenase
222222222220Ribosomal protein L10
544455445444KOW motif
1111111119Ribosomal protein L34
11111117Ribosomal protein L33
323332233327RF-1 domain
435336122130Sodium:solute symporter family
111111111110Imidazoleglycerol-phosphate dehydratase
111111111110DNA polymerase family A
111111111110IMP dehydrogenase / GMP reductase domain
111111111110Glucose-6-phosphate dehydrogenase, NAD binding domain
7969889771080Protein phosphatase 2C
343433332432Nucleotidyl transferase
244484723543Carbonic anhydrase
111111111211Phosphoribulokinase / Uridine kinase family
71513131215108911113Fatty acid desaturase
666666666660MutS domain V
111111111110Delta-aminolevulinic acid dehydratase
444456233136Arginase family
666666666660MCM P-loop domain
222222124322Squalene/phytoene synthase
111391211911111110108FHA domain
24253534323231344129317AMP-binding enzyme
13131414141428141719160G-protein alpha subunit
14151515172717232221186HMG (high mobility group) box
4554646681159His Kinase A (phospho-acceptor) domain
344623443235Armadillo/beta-catenin-like repeat
1613201719352792613195Tetratricopeptide repeat
233323333328Ion transport protein
111111111110DNA gyrase/topoisomerase IV, subunit A
54481091155566BRCA1 C Terminus (BRCT) domain
654566644450Glycosyl transferases group 1
313234343329Glycosyl transferase family 2
122111112113SAM domain (Sterile alpha motif)
333334423331linker histone H1 and H5 family
111111111110Ribosomal protein L7/L12 C-terminal domain
81261523Pectate lyase
11512111ribonuclease
111111112111Urease, gamma subunit
333333343331CoA-ligase
66131066369570Phosphopantetheine attachment site
222233222222Formyl transferase
1110101010109101012102Metallopeptidase family M24
232417131911264Leucine Rich Repeat
696747433916218202alpha/beta hydrolase fold
333333333330RNA polymerase Rpb2, domain 6
555644566652PB1 domain
242222222222Staphylococcal nuclease homologue
121213129910121312114Rab-GTPase-TBC domain
131111111112Tudor domain
122211111113WH1 domain
333435434537Zinc finger, ZZ type
1111111119HRDC domain
6767710976873CBS domain
223222222221Ribosomal protein L13
232222222221Ribosomal protein L4/L1 family
111111111110Clp protease
444434534540S1 RNA binding domain
111111118HIUase/Transthyretin family
434365443541AhpC/TSA family
454444455443tRNA synthetases class I (W and Y)
221211121215UvrD/REP helicase N-terminal domain
79109455891076Rhodanese-like domain
222222222321Universal stress protein family
18161816274332282018236Acetyltransferase (GNAT) family
111111111110SecE/Sec61-gamma subunits of protein translocation complex
111111111110C-terminal regulatory domain of Threonine dehydratase
222222222220AIR synthase related protein, N-terminal domain
535576655552tRNA synthetase class II core domain (G, H, P, S and T)
11Phage integrase family
223222222221Tetrapyrrole (Corrin/Porphyrin) Methylases
111111111110Glycosyl transferase family, a/b domain
213214124121Class II Aldolase and Adducin N-terminal domain
444433443336Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
555555655450Fes/CIP4, and EFC/F-BAR homology domain
222255322227IQ calmodulin-binding motif
222222222220Phosphoinositide 3-kinase family, accessory domain (PIK domain)
222233321222Phospholipase D Active site motif
243421132527Regulator of G protein signaling domain
444454444441GTPase-activator protein for Ras-like GTPase
108108876771081RasGEF domain
979789766876RasGEF N-terminal motif
13131213121413131213128RhoGAP domain
18141515121316141414145RhoGEF domain
544544444442SPRY domain
393343333236RNA polymerase Rpb1, domain 2
111111111110Guanylate kinase
424235845441Gelsolin repeat
776697966669UBA/TS-N domain
12151517151921101615155PHD-finger
111221112315GGL domain
566655655554HECT-domain (ubiquitin-transferase)
11113121112Helix-hairpin-helix motif
111131324118MSP (Major sperm protein) domain
233379635344Ribonuclease III domain
454422244435Region in Clathrin and VPS
444433443437RanBP1 domain
11212