PFAM Domains • Piromyces finnis v3.0
Annotations/GenomesAnasp1Batde5Coere1Conco1Ganpr1Gloin1Neosp1Orpsp1_1Phchr2Phybl2PirE2_1Pirfi3Trire2TotalAnnotation Description
PFAMs
9,3055,4375,7667,0719,34112,10413,98710,8388,2289,2168,4228,1516,507114,373
12221267 transmembrane receptor (rhodopsin family)
117 transmembrane receptor (Secretin family)
45434841310401947 transmembrane sweet-taste receptor of 3 GCPR
42403634565160434748404044581ATPase family associated with various cellular activities (AAA)
104605731644213810149481446246946ABC transporter
4444246541244461ATP synthase alpha/beta family, nucleotide-binding domain
21131513EGF-like domain
121515161614156172191214182Elongation factor Tu GTP binding domain
7913126111431135789145Helix-loop-helix DNA-binding domain
5221041114622932233314Hsp20/alpha crystallin family
176710937783481224317280Hsp70 protein
99119122621128127118155KH domain
1111112111112SH2 domain
101451827172281501152237858924913SH3 domain
1161089101714101110107133Actin
552242028198315781,0842537709268633,617Ankyrin repeat
1226222219PAN domain
118778818971013127125ADP-ribosylation factor family
1434369259331116178Eukaryotic aspartyl protease
1114351541611378104111Cyclic nucleotide-binding domain
213Cytochrome b(C-terminal)/b6/petD
112Cytochrome b/b6/petB
111111118Cytochrome c
23147335111233Double-stranded RNA binding motif
39311724312961352335273820410EF hand
2211212311221214Fe-4S binding domain
12121311111116Fibronectin type III domain
121228Globin
435281723712273310133Glutathione S-transferase, C-terminal domain
311132731333132Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
1237279923492811135160Homeodomain
112Laminin EGF domain
124333412522234lactate/malate dehydrogenase, NAD binding domain
4127Lectin C-type domain
13771285242751613144155Myosin head (motor domain)
912134641911555469688Cytochrome P450
183148941102341,0093212141532201521831063,127Protein kinase domain
3911152286225163314137Pyridine nucleotide-disulphide oxidoreductase
37292128252964332854273323431Ras family
52815175411183313104Response regulator receiver domain
12213361921260RNase H
9069656080881438771977691591,076RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
11Retroviral aspartyl protease
11138312155Reverse transcriptase (RNA-dependent DNA polymerase)
12121241344Serpin (serine protease inhibitor)
1233312217Copper/zinc superoxide dismutase (SODC)
14212113111220Iron/manganese superoxide dismutases, alpha-hairpin domain
148574662257107424803915560Subtilase family
2551010127114272728251776383Sugar (and other) transporter
218121616829321013151711208Thioredoxin
6151527Trefoil (P-type) domain
21574185121118Trypsin
11Thrombospondin type 1 domain
88410761265969696Tubulin/FtsZ family, GTPase domain
101416161691252100von Willebrand factor type A domain
4847326910491802852203475067918Zinc finger, C2H2 type
653946371075791366155486832742Zinc finger, C3HC4 type (RING finger)
301081422564169147020235382Zinc knuckle
323243732544244Protein-tyrosine phosphatase
152230591164117128333129118567short chain dehydrogenase
581532402213359236753286Zinc-binding dehydrogenase
164485216511650Thiolase, N-terminal domain
152933128922151117117Beta-ketoacyl synthase, N-terminal domain
2444644234235472Fe-2S iron-sulfur cluster binding domain
1616Papain family cysteine protease
111111212211116Enolase, C-terminal TIM barrel domain
2529Cytochrome C and Quinol oxidase polypeptide I
11Cytochrome C oxidase subunit II, periplasmic domain
877798148810887109Glutamine amidotransferase class-I
12109991021141015111210152TCP-1/cpn60 chaperonin family
1113ATP synthase A chain
221285414622241Glutamine synthetase, catalytic domain
11111121111214Triosephosphate isomerase
13172034262422121226121616250E1-E2 ATPase
7713915211451620687148Core histone H2A/H2B/H3/H4
347Bacterial regulatory helix-turn-helix protein, lysR family
1247Copper binding proteins, plastocyanin/azurin family
111122312118175468Alpha amylase, catalytic domain
13548852524678142129Phorbol esters/diacylglycerol binding domain (C1 domain)
10863681610658168110Bacterial transferase hexapeptide (six repeats)
3544210554444660tRNA synthetases class I (I, L, M and V)
17161610217281710188187193Cyclin, N-terminal domain
322111824745121402612239Carboxylesterase family
83455255844610491DNA polymerase family B
334334613433444ATP synthase subunit C
112Legume lectin domain
212102172642Peroxidase
121923835Beta-lactamase
253426415422141C-5 cytosine-specific DNA methylase
1124NADH dehydrogenase
69241824253066492634403827470Calcineurin-like phosphoesterase
2511482494214436244214Cellulase (glycosyl hydrolase family 5)
356767636623868tRNA synthetases class II (D, K and N)
13323435493624133854111335387Mitochondrial carrier protein
2091516161147221520262616259Aminotransferase class I and II
108108111017861110108127Phosphoribosyl transferase domain
11Sigma-54 interaction domain
15141413141019131414151610181Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
211111411122119Phosphoglycerate kinase
22222232312225Ribosomal protein S4/S9 N-terminal domain
12232232422227Ribosomal protein S12/S23
4311110Bacterial regulatory helix-turn-helix proteins, AraC family
11111121121114Chaperonin 10 Kd subunit
3710530222761411522313314348C2 domain
40161528172972462348274519425PH domain
95791651457197711121bZIP transcription factor
11181224121121121120125Aldehyde dehydrogenase family
1815241206820291386471317192662Fungal Zn(2)-Cys(6) binuclear cluster domain
132217224029125243981321265Cytochrome b5-like Heme/Steroid binding domain
1114341419Oxidoreductase molybdopterin binding domain
358911142216131314101Oxidoreductase NAD-binding domain
18151713261929232620181625265SNF2 family N-terminal domain
12222232311223Ribosomal protein S7p/S5e
26231915295444202220142620332Ubiquitin-conjugating enzyme
345566635833764Isocitrate/isopropylmalate dehydrogenase
122223112411224Ribosomal Proteins L2, RNA binding domain
112Chitinase class I
422232533433137Hsp90 protein
312212512633233Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
111211211211116Dihydrofolate reductase
130151111186180223922841Chitin recognition protein
1011822431416212383125Cysteine-rich secretory protein family
11121211411117Ribosomal protein S3, C-terminal domain
9312Cupin
6119656245Annexin
11Extracellular link domain
143111112Eukaryotic-type carbonic anhydrase
33Chalcone and stilbene synthases, N-terminal domain
189Bacterial regulatory proteins, luxR family
33433243252-oxoacid dehydrogenases acyltransferase (catalytic domain)
331152722Catalase
11111218Disintegrin
3401822512174UDP-glucoronosyl and UDP-glucosyl transferase
123384215611845Aminotransferase class-III
22222221241224Ribosomal protein S19
11111321111115DNA gyrase B
42233513345439Thiamine pyrophosphate enzyme, central domain
333443623423343Lyase
142322312723147273Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
32423216Sodium:neurotransmitter symporter family
211217Ferritin-like domain
361261721223137Adenylate and Guanylate cyclase catalytic domain
111111118ATP synthase delta (OSCP) subunit
111112111111114Orotidine 5'-phosphate decarboxylase / HUMPS family
211111311122118Indole-3-glycerol phosphate synthase
11Aromatic amino acid lyase
131131521321125Pyruvate kinase, barrel domain
25171515223036351020242411284Kinesin motor domain
36362623333754243234263626423DnaJ domain
13141414161527101414111414190Proteasome subunit
1334329211736Major intrinsic protein
111111111211114ATP synthase
71161021610264Glycosyl hydrolase family 1
68225216316781673'5'-cyclic nucleotide phosphodiesterase
11Protease inhibitor/seed storage/LTP family
1112312112116Profilin
122123212511124Ribosomal protein L22p/L17e
122122222311223Ribosomal protein L14p/L23e
11Resolvase, N terminal domain
2313131420734621192315248312Ubiquitin family
9534651686439381Cofilin/tropomyosin-type actin-binding protein
11222221231122214-3-3 protein
13374222231333Alkaline phosphatase
4430743134464Zinc carboxypeptidase
235527374827145620191227320Aldo/keto reductase family
22162116135120171420122014256Myb-like DNA-binding domain
4243457151044457Forkhead domain
211111117Glycosyl hydrolases family 32 N-terminal domain
111111118Ribosomal protein L16p/L10e
11222222411121Ribosomal protein S14p/S29e
663562943656364FKBP-type peptidyl-prolyl cis-trans isomerase
2116412721251154Glutathione peroxidase
11112222311219
536137537141344791Flavodoxin
332212462233134Calreticulin family
10745264Common central domain of tyrosinase
112Thymidine kinase
344897419533363Aminotransferase class-V
11Gram-negative porin
2111141112Ribonucleotide reductase, small chain
42483739455652424947354249583DEAD/DEAH box helicase
71666360798692638874557475946Helicase conserved C-terminal domain
1113Fructose-bisphosphate aldolase class-I
111213121111117EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
122222212311223Ribosomal protein L23
211222211111118Pyridoxal-dependent decarboxylase, C-terminal sheet domain
212111431522227Ribosomal protein L5
225694555531658Pyridoxal-dependent decarboxylase conserved domain
141222213211224Citrate synthase, C-terminal domain
665456666645570GHMP kinases N terminal domain
3557976261133572Biotin carboxylase, N-terminal domain
212211111122118Tryptophan synthase alpha chain
11699137162109111012125Pyridoxal-phosphate dependent enzyme
11'Paired box' domain
1181016281418141716121215191NUDIX domain
325346314623446pfkB family carbohydrate kinase
131591433Glycosyl hydrolases family 28
11Luciferase-like monooxygenase
122222212311223Ribosomal protein L3
12222222511224Ribosomal protein L11, RNA binding domain
8466111010591156697Histidine phosphatase superfamily (branch 1)
1113Rubredoxin
21115Chloramphenicol acetyltransferase
111111121111114Thymidylate synthase
4444246441244460ATP synthase alpha/beta chain, C terminal domain
1665910523115910155129Calponin homology (CH) domain
334568525633457Glutamine amidotransferases class-II
11Phosphoenolpyruvate carboxylase
322122322222227Ribosomal protein S15
2116422220'Cold-shock' DNA-binding domain
165113Thaumatin family
111111129Fructose-1-6-bisphosphatase, N-terminal domain
1112212111Ribonucleotide reductase, all-alpha domain
222322312422229Ribosomal protein S2
213312622722235SRF-type transcription factor (DNA-binding and dimerisation domain)
1471419172424793512146202GATA zinc finger
187143862320191133153Amino acid permease
5791566936635181Prolyl oligopeptidase family
212212331521227Ribosomal protein L30p/L7e
5166666510255467Histidine phosphatase superfamily (branch 2)
11111117Respiratory-chain NADH dehydrogenase, 30 Kd subunit
424644854545459Aconitase family (aconitate hydratase)
1515829628211159Glycosyl hydrolase family 10
4311110Glycosyl hydrolases family 17
12222121251223Ribosomal protein S5, N-terminal domain
445451432423142Nucleoside diphosphate kinase
1323222115224Tetraspanin family
11121222311118Ribosomal protein S10p/S20e
1391415228221380Arrestin (or S-antigen), N-terminal domain
11Interleukin-1 / 18
11111121111113Phosphoglucose isomerase
1111223111115Carbohydrate phosphorylase
11111211211114SecY translocase
22Pili and flagellar-assembly chaperone, PapD N-terminal domain
111111118Respiratory-chain NADH dehydrogenase, 49 Kd subunit
122222212411224Ribosomal protein L6
233333224422336Polyprenyl synthetase
424222852744450Hexokinase
444356727843966Dynamin family
1111116Biopterin-dependent aromatic amino acid hydroxylase
211111251222122Transcription factor TFIID (or TATA-binding protein, TBP)
21310545434Rieske [2Fe-2S] domain
1315Bacterial regulatory proteins, lacI family
11phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
224Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
246Proton-conducting membrane transporter
177997291011669Biotin-requiring enzyme
511131842234136Phosphofructokinase
12222122211220Ribosomal protein S17
211111119Hydroxymethylglutaryl-coenzyme A reductase
242142213621333FGGY family of carbohydrate kinases, N-terminal domain
44Hemocyanin, copper containing domain
312442319FERM central domain
215121113Sodium:dicarboxylate symporter family
2147MerR family regulatory protein
6563892911212100Enoyl-CoA hydratase/isomerase
223212212411225Ribosomal protein S9/S16
22533333232233Transcription factor TFIIB repeat
5685105638425673Cytidine and deoxycytidylate deaminase zinc-binding region
2111312112Molybdopterin oxidoreductase
4510910872210221741129Chromo (CHRromatin Organisation MOdifier) domain
1111112211416Phosphatidylinositol-specific phospholipase C, Y domain
41111178135639Phosphatidylinositol-specific phospholipase C, X domain
4223103717534556D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
23121613422229Malic enzyme, N-terminal domain
3192116PEP-utilising enzyme, mobile domain
112Bacterial regulatory proteins, gntR family
11122221126-phosphogluconate dehydrogenase, C-terminal domain
31316855849Multicopper oxidase
112Granulin
136671212191411771510139WW domain
122212123311122Ribosomal RNA adenine dimethylase
1781751201081471422652131401621501971232,120WD domain, G-beta repeat
4223754532Heavy-metal-associated domain
583563983554468Adenylate kinase
11Pathogenesis-related protein Bet v I family
222132412222227Phosphoglucomutase/phosphomannomutase, C-terminal domain
12222222311222Ribosomal protein S8
12222321311121Ribosomal protein S11
15127365241661412144138LIM domain
232135213412130Regulator of chromosome condensation (RCC1) repeat
122223212211223Ribosomal protein S13/S18
112
1124Tau and MAP protein, tubulin-binding repeat
44Fimbrial protein
11NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
122222112211221chorismate binding enzyme
53334493375435660s Acidic ribosomal protein
112CUB domain
444445525434452Prenyltransferase and squalene oxidase repeat
11775962266115125112Protein kinase C terminal domain
1111116Single-strand binding protein family
211111431124123S-adenosylmethionine synthetase, N-terminal domain
1510128941231591413147190Bromodomain
336Bacterial regulatory proteins, tetR family
11615259916899Acyl-CoA dehydrogenase, C-terminal domain
16181518212326231521141415239Ubiquitin carboxyl-terminal hydrolase
111111118Ribosomal protein L36
219332411329Ribonuclease T2 family
815163617641455393HSF-type DNA-binding
222223332212228SRP54-type protein, GTPase domain
11211219Urease alpha-subunit, N-terminal domain
23811384222712578Serine carboxypeptidase
9118610814138101088123Phosphatidylinositol 3- and 4-kinase
213DeoR C terminal sensor domain
221121372242231Transketolase, thiamine diphosphate binding domain
292443156363192Glycosyl hydrolases family 11
1111112211113WHEP-TRS domain
222123332222430Inositol monophosphatase family
635564855524361Glutaredoxin
1121141213Isocitrate lyase family
222222331222227Serine hydroxymethyltransferase
71111454196251Iron-containing alcohol dehydrogenase
323232411212228Ribosomal protein L10
576544913856669KOW motif
11111117Ribosomal protein L34
11Ribosomal protein L33
13234321221RF-1 domain
51111131312525Sodium:solute symporter family
12111111111113Imidazoleglycerol-phosphate dehydratase
11221119DNA polymerase family A
311111731132126IMP dehydrogenase / GMP reductase domain
1212113112Glucose-6-phosphate dehydrogenase, NAD binding domain
107569102159118126119Protein phosphatase 2C
242237543423344Nucleotidyl transferase
22115224222429Carbonic anhydrase
121222111215Phosphoribulokinase / Uridine kinase family
44Transcriptional regulatory protein, C terminal
6661410716671Fatty acid desaturase
356575436633662MutS domain V
111111118Delta-aminolevulinic acid dehydratase
111131117311325Arginase family
888888996668698MCM P-loop domain
11111