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PFAM Domains • Clavispora lusitaniae ATCC 42720
Annotations/GenomesAscru1Aspnid1Canar1Canca1Canta1Clalu1_2Dekbr2Hanva1_1Klula1Lipst1_1Metbi1Picpa1Sacce1Spapa3Wican1Yarli1TotalAnnotation Description
PFAMs
5,3299,0745,1224,4745,1424,9944,9103,7424,7746,3674,8894,7865,5355,2595,8075,73785,941
31423330333232303435343133333333529ATPase family associated with various cellular activities (AAA)
30492825252724292356222731313632495ABC transporter
454444444444444465ATP synthase alpha/beta family, nucleotide-binding domain
1113EGF-like domain
17131412141414121414141216141414222Elongation factor Tu GTP binding domain
1313107981068971078109144Helix-loop-helix DNA-binding domain
451212422225Hsp20/alpha crystallin family
10897999897981491011146Hsp70 protein
88856975897688811121KH domain
111111111111113SH2 domain
22231816232017162021232122192120322SH3 domain
1010108111010710101199101110156Actin
12591510151715121516131418161620283Ankyrin repeat
7767676577667767104ADP-ribosylation factor family
1110941285858987141237167Eukaryotic aspartyl protease
243443414443333453Cyclic nucleotide-binding domain
11Cytochrome b/b6/petB
21111211111211118Cytochrome c
523121112312235236Double-stranded RNA binding motif
20181114101011101115101211111117202EF hand
111112311121112204Fe-4S binding domain
31221212216Fibronectin type III domain
7222232212282340Globin
91252446247376681095Glutathione S-transferase, C-terminal domain
221112213111312125Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
573243335634854570Homeodomain
11Laminin EGF domain
443233313232333244lactate/malate dehydrogenase, NAD binding domain
352323233523531550Myosin head (motor domain)
41146598455216439517225Cytochrome P450
1021041017995939487888695891149397831,500Protein kinase domain
7197558576107119595125Pyridine nucleotide-disulphide oxidoreductase
35232119202118122123212024202124343Ras family
41964773437754897104Response regulator receiver domain
11041131111111238RNase H
51655240454153334162414848465955780RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
111115Retroviral aspartyl protease
201122044Reverse transcriptase (RNA-dependent DNA polymerase)
223133211122132231Copper/zinc superoxide dismutase (SODC)
121121111111122221Iron/manganese superoxide dismutases, alpha-hairpin domain
103464444354541251693Subtilase family
810630102425281622103201734253926533Sugar (and other) transporter
998799968898108109136Thioredoxin
32111111211112221Trypsin
473533323534433459Tubulin/FtsZ family, GTPase domain
1214von Willebrand factor type A domain
37624130383233292941363238333934584Zinc finger, C2H2 type
30392630313128222634283522333736488Zinc finger, C3HC4 type (RING finger)
498344814925674684Zinc knuckle
622233222233343244Protein-tyrosine phosphatase
16141172022211571880171813334029507short chain dehydrogenase
2173162317171651540201017182920357Zinc-binding dehydrogenase
373322212522245348Thiolase, N-terminal domain
2372222232522222271Beta-ketoacyl synthase, N-terminal domain
3533333323342333492Fe-2S iron-sulfur cluster binding domain
211111111111512122Enolase, C-terminal TIM barrel domain
33Cytochrome C and Quinol oxidase polypeptide I
11Cytochrome C oxidase subunit II, periplasmic domain
8877777678789878119Glutamine amidotransferase class-I
111010991091110910910101110158TCP-1/cpn60 chaperonin family
131211111111111220Glutamine synthetase, catalytic domain
121111111311111220Triosephosphate isomerase
1218981099810171081210139172E1-E2 ATPase
1471051181061079610111010144Core histone H2A/H2B/H3/H4
1121133613192834168Alpha amylase, catalytic domain
221211111211111120Phorbol esters/diacylglycerol binding domain (C1 domain)
5105455525645487686Bacterial transferase hexapeptide (six repeats)
433433233333333349tRNA synthetases class I (I, L, M and V)
117106111310812711101312118160Cyclin, N-terminal domain
241174441Carboxylesterase family
444445444444444465DNA polymerase family B
363332333433333351ATP synthase subunit C
23211121122121325Peroxidase
1813111111322Beta-lactamase
22C-5 cytosine-specific DNA methylase
112NADH dehydrogenase
19282115181820121729181621182132323Calcineurin-like phosphoesterase
312213211334433348Cellulase (glycosyl hydrolase family 5)
676666656666666696tRNA synthetases class II (D, K and N)
34383233343131252935333434333539530Mitochondrial carrier protein
11recA bacterial DNA recombination protein
15221311141412101111131111131414209Aminotransferase class I and II
108868887888811888130Phosphoribosyl transferase domain
61184981046985881110125Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
111111121111111117Phosphoglycerate kinase
222121222222322231Ribosomal protein S4/S9 N-terminal domain
222222222222322233Ribosomal protein S12/S23
12126Bacterial regulatory helix-turn-helix proteins, AraC family
11211111111111116Chaperonin 10 Kd subunit
1011961097588108119118140C2 domain
1220131414151271414131224121818232PH domain
6106365317756854789bZIP transcription factor
1028101099107101199991513178Aldehyde dehydrogenase family
61305704366666234571255554535993511,254Fungal Zn(2)-Cys(6) binuclear cluster domain
172813121415159111914117131315226Cytochrome b5-like Heme/Steroid binding domain
3115Oxidoreductase molybdopterin binding domain
51777779678678797124Oxidoreductase NAD-binding domain
19241817181819181719181917171919296SNF2 family N-terminal domain
222222312222222232Ribosomal protein S7p/S5e
13211415131214121221131414131616233Ubiquitin-conjugating enzyme
986565656666766598Isocitrate/isopropylmalate dehydrogenase
223231212233332236Ribosomal Proteins L2, RNA binding domain
111111111111211117Hsp90 protein
222222212222222231Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
111111111111111116Dihydrofolate reductase
72110Chitin recognition protein
42244323322393248Cysteine-rich secretory protein family
111111111111111116Ribosomal protein S3, C-terminal domain
314Cupin
3115Annexin
66Bacterial regulatory proteins, luxR family
11Trypsin and protease inhibitor
2323222222222223352-oxoacid dehydrogenases acyltransferase (catalytic domain)
141222112611212332Catalase
2114Disintegrin
11114UDP-glucoronosyl and UDP-glucosyl transferase
6810346566454458690Aminotransferase class-III
212222222212222230Ribosomal protein S19
111111111111111116DNA gyrase B
266543454525734469Thiamine pyrophosphate enzyme, central domain
444343333333343353Lyase
222222212222322232Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
11Sodium:neurotransmitter symporter family
211211111111111118Adenylate and Guanylate cyclase catalytic domain
111111111111111116ATP synthase delta (OSCP) subunit
11111111111111115Orotidine 5'-phosphate decarboxylase / HUMPS family
111111121111111117Indole-3-glycerol phosphate synthase
22Aromatic amino acid lyase
211111111111211118Pyruvate kinase, barrel domain
71198664356676689107Kinesin motor domain
24272421232323142124242321232531371DnaJ domain
14151414141314141414131414141414223Proteasome subunit
25111113222412331Major intrinsic protein
111111111111111116ATP synthase
314Glycosyl hydrolase family 1
1111111111111111163'5'-cyclic nucleotide phosphodiesterase
11111111111111115Profilin
211121112112211222Ribosomal protein L22p/L17e
222111222222322230Ribosomal protein L14p/L23e
911687874811769789125Ubiquitin family
443242423443345354Cofilin/tropomyosin-type actin-binding protein
12121111121121122114-3-3 protein
141211211311113125Alkaline phosphatase
12111111111111116Zinc carboxypeptidase
10401561310131094110716182417259Aldo/keto reductase family
15171311131214111313121215121414211Myb-like DNA-binding domain
243333333333444351Forkhead domain
311812117Glycosyl hydrolases family 32 N-terminal domain
1111111111111114Ribosomal protein L16p/L10e
222222222222322132Ribosomal protein S14p/S29e
553332233333433351FKBP-type peptidyl-prolyl cis-trans isomerase
411121122121322127Glutathione peroxidase
11121112211212120
876678745106476710108Flavodoxin
11111111111111115Calreticulin family
99Common central domain of tyrosinase
465645524645346675Aminotransferase class-V
111111111111211117Ribonucleotide reductase, small chain
35393330313132333336323156313434551DEAD/DEAH box helicase
58705653595756535970545979595962963Helicase conserved C-terminal domain
111111111111111116EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
222222212222222231Ribosomal protein L23
11111111111111115Pyridoxal-dependent decarboxylase, C-terminal sheet domain
112111212112312123Ribosomal protein L5
463333312623233350Pyridoxal-dependent decarboxylase conserved domain
231211112311312227Citrate synthase, C-terminal domain
554555445754655579GHMP kinases N terminal domain
585755655655756792Biotin carboxylase, N-terminal domain
111111111111111116Tryptophan synthase alpha chain
814578956888878119129Pyridoxal-phosphate dependent enzyme
71479887579867879126NUDIX domain
363433324335443457pfkB family carbohydrate kinase
111113Glycosyl hydrolases family 28
213Luciferase-like monooxygenase
222222222222222232Ribosomal protein L3
222222222222322233Ribosomal protein L11, RNA binding domain
139121016111271011121212151210184Histidine phosphatase superfamily (branch 1)
111111111111111116Thymidylate synthase
454444444444444465ATP synthase alpha/beta chain, C terminal domain
655455514455443570Calponin homology (CH) domain
554555544655754579Glutamine amidotransferases class-II
222221232222222232Ribosomal protein S15
11'Cold-shock' DNA-binding domain
21111111111111116Fructose-1-6-bisphosphatase, N-terminal domain
112122212122222227Ribonucleotide reductase, all-alpha domain
222222222222322233Ribosomal protein S2
122222212222412231SRF-type transcription factor (DNA-binding and dimerisation domain)
977598846776108107118GATA zinc finger
4652271431342523259261924294331458Amino acid permease
262222222222223136Prolyl oligopeptidase family
223233122123432237Ribosomal protein L30p/L7e
194343456933656475Histidine phosphatase superfamily (branch 2)
111111111111113Respiratory-chain NADH dehydrogenase, 30 Kd subunit
564444444444444467Aconitase family (aconitate hydratase)
33Glycosyl hydrolase family 10
142242424333343448Glycosyl hydrolases family 17
222122212222222230Ribosomal protein S5, N-terminal domain
111111111111111116Nucleoside diphosphate kinase
222111212112212124Ribosomal protein S10p/S20e
465533112633324455Arrestin (or S-antigen), N-terminal domain
111111111111111116Phosphoglucose isomerase
1111111111111114Carbohydrate phosphorylase
112122211121222225SecY translocase
111111111111113Respiratory-chain NADH dehydrogenase, 49 Kd subunit
323222433223323241Ribosomal protein L6
383323333333333352Polyprenyl synthetase
354333422234533352Hexokinase
373333333333333453Dynamin family
111111111111111116Transcription factor TFIID (or TATA-binding protein, TBP)
392122211221113134Rieske [2Fe-2S] domain
11Bacterial regulatory proteins, lacI family
11Phytochrome region
33Proton-conducting membrane transporter
6969667667668679110Biotin-requiring enzyme
212122222122222128Phosphofructokinase
21222222222322230Ribosomal protein S17
121111111111211118Hydroxymethylglutaryl-coenzyme A reductase
344343423333324351FGGY family of carbohydrate kinases, N-terminal domain
11Hemocyanin, copper containing domain
11Sodium:dicarboxylate symporter family
31537332124333441070Enoyl-CoA hydratase/isomerase
222221212221322230Ribosomal protein S9/S16
222222232322332236Transcription factor TFIIB repeat
677665656466665693Cytidine and deoxycytidylate deaminase zinc-binding region
121111111111114Molybdopterin oxidoreductase
2192122232422222251Chromo (CHRromatin Organisation MOdifier) domain
121111111111111117Phosphatidylinositol-specific phospholipase C, Y domain
121122211112111121Phosphatidylinositol-specific phospholipase C, X domain
81165544228444661493D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
121111111111111117Malic enzyme, N-terminal domain
11PEP-utilising enzyme, mobile domain
2211111111112111196-phosphogluconate dehydrogenase, C-terminal domain
282133323932325354Multicopper oxidase
6105364424857566687WW domain
21122212222222227Ribosomal RNA adenine dimethylase
310122435121015857Yeast PIR protein repeat
88112878495869159741008786888993941,413WD domain, G-beta repeat
34334444534344456Heavy-metal-associated domain
433333333333333349Adenylate kinase
223222222223323337Phosphoglucomutase/phosphomannomutase, C-terminal domain
113222313123222232Ribosomal protein S8
11111111111211116Ribosomal protein S11
443333333332422449LIM domain
231211131111111122Regulator of chromosome condensation (RCC1) repeat
222222222122322232Ribosomal protein S13/S18
222222222222222232chorismate binding enzyme
53535445535455547060s Acidic ribosomal protein
464444454444443466Prenyltransferase and squalene oxidase repeat
9675576766768657103Protein kinase C terminal domain
111111111111111116Single-strand binding protein family
111111111111211117S-adenosylmethionine synthetase, N-terminal domain
96989997879910899135Bromodomain
15712162221149Acyl-CoA dehydrogenase, C-terminal domain
15141512151415111217141216151514226Ubiquitin carboxyl-terminal hydrolase
111111111111113Ribosomal protein L36
121122111121111221Ribonuclease T2 family
434344424344525358HSF-type DNA-binding
2222222