PFAM Domains • Wallemiomycetes
Annotations/GenomesWalic1Walse1TotalAnnotation Description
293160ATPase family associated with various cellular activities (AAA)
202444ABC transporter
448ATP synthase alpha/beta family, nucleotide-binding domain
151530Elongation factor Tu GTP binding domain
4711Helix-loop-helix DNA-binding domain
4812Hsp20/alpha crystallin family
7714Hsp70 protein
8816KH domain
112SH2 domain
242044SH3 domain
161430Ankyrin repeat
7714ADP-ribosylation factor family
224Eukaryotic aspartyl protease
224Cyclic nucleotide-binding domain
112Cytochrome c
112Double-stranded RNA binding motif
131427EF hand
2134Fe-4S binding domain
112Fibronectin type III domain
6511Glutathione S-transferase, C-terminal domain
112Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
224lactate/malate dehydrogenase, NAD binding domain
7613Myosin head (motor domain)
459Cytochrome P450
7878156Protein kinase domain
6713Pyridine nucleotide-disulphide oxidoreductase
202141Ras family
7714Response regulator receiver domain
2911RNase H
5760117RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
213Reverse transcriptase (RNA-dependent DNA polymerase)
224Iron/manganese superoxide dismutases, alpha-hairpin domain
459Subtilase family
171330Sugar (and other) transporter
459Tubulin/FtsZ family, GTPase domain
213von Willebrand factor type A domain
242751Zinc finger, C2H2 type
232447Zinc finger, C3HC4 type (RING finger)
8816Zinc knuckle
224Protein-tyrosine phosphatase
293362short chain dehydrogenase
161531Zinc-binding dehydrogenase
224Thiolase, N-terminal domain
112Beta-ketoacyl synthase, N-terminal domain
3472Fe-2S iron-sulfur cluster binding domain
112Enolase, C-terminal TIM barrel domain
11Cytochrome C oxidase subunit II, periplasmic domain
8816Glutamine amidotransferase class-I
9918TCP-1/cpn60 chaperonin family
123Glutamine synthetase, catalytic domain
112Triosephosphate isomerase
11920E1-E2 ATPase
221941Core histone H2A/H2B/H3/H4
112Phorbol esters/diacylglycerol binding domain (C1 domain)
6713Bacterial transferase hexapeptide (six repeats)
336tRNA synthetases class I (I, L, M and V)
91019Cyclin, N-terminal domain
224Carboxylesterase family
448DNA polymerase family B
336ATP synthase subunit C
161632Calcineurin-like phosphoesterase
358Cellulase (glycosyl hydrolase family 5)
5510tRNA synthetases class II (D, K and N)
303060Mitochondrial carrier protein
101121Aminotransferase class I and II
6713Phosphoribosyl transferase domain
101020Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
112Phosphoglycerate kinase
224Ribosomal protein S4/S9 N-terminal domain
224Ribosomal protein S12/S23
112Chaperonin 10 Kd subunit
91019C2 domain
212041PH domain
6612bZIP transcription factor
8816Aldehyde dehydrogenase family
333467Fungal Zn(2)-Cys(6) binuclear cluster domain
171633Cytochrome b5-like Heme/Steroid binding domain
7714Oxidoreductase NAD-binding domain
141428SNF2 family N-terminal domain
224Ribosomal protein S7p/S5e
161632Ubiquitin-conjugating enzyme
5510Isocitrate/isopropylmalate dehydrogenase
224Ribosomal Proteins L2, RNA binding domain
112Hsp90 protein
224Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11Dihydrofolate reductase
11Chitin recognition protein
112Ribosomal protein S3, C-terminal domain
2352-oxoacid dehydrogenases acyltransferase (catalytic domain)
112UDP-glucoronosyl and UDP-glucosyl transferase
5813Aminotransferase class-III
123Ribosomal protein S19
112DNA gyrase B
224Thiamine pyrophosphate enzyme, central domain
224Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
112Adenylate and Guanylate cyclase catalytic domain
112ATP synthase delta (OSCP) subunit
112Orotidine 5'-phosphate decarboxylase / HUMPS family
112Indole-3-glycerol phosphate synthase
112Pyruvate kinase, barrel domain
8816Kinesin motor domain
242650DnaJ domain
141428Proteasome subunit
336Major intrinsic protein
112ATP synthase
11Glycosyl hydrolase family 1
1123'5'-cyclic nucleotide phosphodiesterase
112Ribosomal protein L22p/L17e
224Ribosomal protein L14p/L23e
71017Ubiquitin family
448Cofilin/tropomyosin-type actin-binding protein
11214-3-3 protein
123Alkaline phosphatase
141731Aldo/keto reductase family
7815Myb-like DNA-binding domain
11Forkhead domain
123Glycosyl hydrolases family 32 N-terminal domain
112Ribosomal protein L16p/L10e
224Ribosomal protein S14p/S29e
336FKBP-type peptidyl-prolyl cis-trans isomerase
112Glutathione peroxidase
112Calreticulin family
347Common central domain of tyrosinase
459Aminotransferase class-V
112Ribonucleotide reductase, small chain
353469DEAD/DEAH box helicase
6056116Helicase conserved C-terminal domain
112Fructose-bisphosphate aldolase class-I
112EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
213Ribosomal protein L23
112Pyridoxal-dependent decarboxylase, C-terminal sheet domain
224Ribosomal protein L5
336Pyridoxal-dependent decarboxylase conserved domain
112Citrate synthase, C-terminal domain
5510GHMP kinases N terminal domain
448Biotin carboxylase, N-terminal domain
112Tryptophan synthase alpha chain
7714Pyridoxal-phosphate dependent enzyme
10919NUDIX domain
448pfkB family carbohydrate kinase
224Ribosomal protein L3
224Ribosomal protein L11, RNA binding domain
8816Histidine phosphatase superfamily (branch 1)
112Thymidylate synthase
448ATP synthase alpha/beta chain, C terminal domain
448Calponin homology (CH) domain
336Glutamine amidotransferases class-II
224Ribosomal protein S15
112Fructose-1-6-bisphosphatase, N-terminal domain
112Ribonucleotide reductase, all-alpha domain
325Ribosomal protein S2
224SRF-type transcription factor (DNA-binding and dimerisation domain)
7714GATA zinc finger
5914Amino acid permease
336Prolyl oligopeptidase family
112Ribosomal protein L30p/L7e
549Histidine phosphatase superfamily (branch 2)
112Respiratory-chain NADH dehydrogenase, 30 Kd subunit
448Aconitase family (aconitate hydratase)
224Ribosomal protein S5, N-terminal domain
123Nucleoside diphosphate kinase
224Ribosomal protein S10p/S20e
112Arrestin (or S-antigen), N-terminal domain
112Phosphoglucose isomerase
112SecY translocase
112Respiratory-chain NADH dehydrogenase, 49 Kd subunit
224Ribosomal protein L6
235Polyprenyl synthetase
336Dynamin family
112Transcription factor TFIID (or TATA-binding protein, TBP)
112Rieske [2Fe-2S] domain
5510Biotin-requiring enzyme
224Ribosomal protein S17
112Hydroxymethylglutaryl-coenzyme A reductase
224FGGY family of carbohydrate kinases, N-terminal domain
448Enoyl-CoA hydratase/isomerase
224Ribosomal protein S9/S16
224Transcription factor TFIIB repeat
5510Cytidine and deoxycytidylate deaminase zinc-binding region
112Molybdopterin oxidoreductase
437Chromo (CHRromatin Organisation MOdifier) domain
123Phosphatidylinositol-specific phospholipase C, Y domain
123Phosphatidylinositol-specific phospholipase C, X domain
448D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
224Malic enzyme, N-terminal domain
1126-phosphogluconate dehydrogenase, C-terminal domain
123Multicopper oxidase
7512WW domain
224Ribosomal RNA adenine dimethylase
9294186WD domain, G-beta repeat
336Heavy-metal-associated domain
336Adenylate kinase
224Phosphoglucomutase/phosphomannomutase, C-terminal domain
123Ribosomal protein S8
224Ribosomal protein S11
325LIM domain
112Regulator of chromosome condensation (RCC1) repeat
224Ribosomal protein S13/S18
224chorismate binding enzyme
33660s Acidic ribosomal protein
448Prenyltransferase and squalene oxidase repeat
6612Protein kinase C terminal domain
112Single-strand binding protein family
112S-adenosylmethionine synthetase, N-terminal domain
336Acyl-CoA dehydrogenase, C-terminal domain
121224Ubiquitin carboxyl-terminal hydrolase
112Ribosomal protein L36
112Ribonuclease T2 family
448HSF-type DNA-binding
224SRP54-type protein, GTPase domain
112Urease alpha-subunit, N-terminal domain
224Serine carboxypeptidase
6612Phosphatidylinositol 3- and 4-kinase
224Transketolase, thiamine diphosphate binding domain
112WHEP-TRS domain
112Inositol monophosphatase family
112Isocitrate lyase family
112Serine hydroxymethyltransferase
224Iron-containing alcohol dehydrogenase
224Ribosomal protein L10
448KOW motif
11Ribosomal protein L34
134RF-1 domain
224Sodium:solute symporter family
112Imidazoleglycerol-phosphate dehydratase
112DNA polymerase family A
112IMP dehydrogenase / GMP reductase domain
112Glucose-6-phosphate dehydrogenase, NAD binding domain
5510Protein phosphatase 2C
325Nucleotidyl transferase
11Carbonic anhydrase
112Phosphoribulokinase / Uridine kinase family
6410Fatty acid desaturase
5510MutS domain V
112Delta-aminolevulinic acid dehydratase
224Arginase family
6612MCM P-loop domain
112Squalene/phytoene synthase
6612FHA domain
131023AMP-binding enzyme
235G-protein alpha subunit
7714HMG (high mobility group) box
336His Kinase A (phospho-acceptor) domain
336Armadillo/beta-catenin-like repeat
232043Tetratricopeptide repeat
112Ion transport protein
112DNA gyrase/topoisomerase IV, subunit A
6713BRCA1 C Terminus (BRCT) domain
448Glycosyl transferases group 1
112Glycosyl transferase family 2
112linker histone H1 and H5 family
112Ribosomal protein L7/L12 C-terminal domain
112Urease, gamma subunit
336Phosphopantetheine attachment site
336Formyl transferase
6612Metallopeptidase family M24
101121Leucine Rich Repeat
161834alpha/beta hydrolase fold
336RNA polymerase Rpb2, domain 6
459PB1 domain
224Staphylococcal nuclease homologue
6612Rab-GTPase-TBC domain
112Tudor domain
112WH1 domain
336Zinc finger, ZZ type
112HRDC domain
6814CBS domain
224Ribosomal protein L13
224Ribosomal protein L4/L1 family
437S1 RNA binding domain
112HIUase/Transthyretin family
224AhpC/TSA family
448tRNA synthetases class I (W and Y)
11UvrD/REP helicase N-terminal domain
448Rhodanese-like domain
459Universal stress protein family
101222Acetyltransferase (GNAT) family
112SecE/Sec61-gamma subunits of protein translocation complex
112C-terminal regulatory domain of Threonine dehydratase
224AIR synthase related protein, N-terminal domain
6612tRNA synthetase class II core domain (G, H, P, S and T)
224Tetrapyrrole (Corrin/Porphyrin) Methylases
112Glycosyl transferase family, a/b domain
246Class II Aldolase and Adducin N-terminal domain
112Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
235Fes/CIP4, and EFC/F-BAR homology domain
538IQ calmodulin-binding motif
224Phosphoinositide 3-kinase family, accessory domain (PIK domain)
224Phospholipase D Active site motif
112Regulator of G protein signaling domain
336GTPase-activator protein for Ras-like GTPase
5510RasGEF domain
5510RasGEF N-terminal motif
7714RhoGAP domain
111122RhoGEF domain
336SPRY domain
336RNA polymerase Rpb1, domain 2
112Guanylate kinase
224Gelsolin repeat
8917UBA/TS-N domain
448HECT-domain (ubiquitin-transferase)
112Helix-hairpin-helix motif
112MSP (Major sperm protein) domain
437Ribonuclease III domain
224Region in Clathrin and VPS
336RanBP1 domain
224PPIC-type PPIASE domain
101020Zinc finger C-x8-C-x5-C-x3-H type (and similar)
11Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
242246F-box domain
112Elongation factor 1 gamma, conserved domain
112Calpain family cysteine protease
112Copper fist DNA binding domain
448CRAL/TRIO domain
112BTB/POZ domain
213Ricin-type beta-trefoil lectin domain
112Inhibitor of Apoptosis domain
336Voltage gated chloride channel
325Caspase domain
112Poly-adenylate binding protein, unique domain
112POLO box duplicated region
101121ABC transporter transmembrane region
11Integrase core domain
336FAD binding domain
112Condensation domain
112S-adenosyl-L-homocysteine hydrolase, NAD binding domain
112HAMP domain
224ribosomal L5P family C-terminus
5510Insulinase (Peptidase family M16)
336Dehydrogenase E1 component
112Lumazine binding domain
6612Elongation factor G C-terminus
336DnaJ central domain
235Ribosomal protein L1p/L10e family
437Cation transporting ATPase, C-terminus
7411Cation transporter/ATPase, N-terminus
448Aconitase C-terminal domain
336Amino acid kinase family
112N-(5'phosphoribosyl)anthranilate (PRA) isomerase
112Acyl transferase domain
112Urease beta subunit
123Dihydrodipicolinate synthetase family
201939haloacid dehalogenase-like hydrolase
224Glycosyl hydrolases family 2
224Glycosyl hydrolases family 18
112Proliferating cell nuclear antigen, N-terminal domain
112Adenylosuccinate synthetase
224Asparaginase, N-terminal
325Peptidase S24-like
112Inorganic pyrophosphatase
213Glycosyl hydrolases family 16
112Glycosyl hydrolases family 15
5510NADH:flavin oxidoreductase / NADH oxidase family
1123-hydroxyacyl-CoA dehydrogenase, C-terminal domain
112Glycosyl hydrolase family 20, catalytic domain
336HhH-GPD superfamily base excision DNA repair protein
112AIR carboxylase
6612GMC oxidoreductase
224Asparagine synthase
112EF-1 guanine nucleotide exchange domain
112Homoserine dehydrogenase
336tRNA synthetases class I (E and Q), catalytic domain
112tRNA synthetases class I (R)
5510XPG N-terminal domain
6511Metallo-beta-lactamase superfamily
448Choline/Carnitine o-acyltransferase
112Putative esterase
112Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
112Arginosuccinate synthase
112Electron transfer flavoprotein FAD-binding domain
336RNB domain
336CNH domain
235Diacylglycerol kinase catalytic domain
448Dual specificity phosphatase, catalytic domain
235P21-Rho-binding domain
111021PX domain
336Ras association (RalGDS/AF-6) domain
448UBX domain
224VHS domain
224DAHP synthetase I family
336Carbon-nitrogen hydrolase
112Prephenate dehydratase
5510Pumilio-family RNA binding repeat
6612Histone-like transcription factor (CBF/NF-Y) and archaeal histone
112Pterin binding enzyme
112ER lumen protein retaining receptor
224tRNA N6-adenosine threonylcarbamoyltransferase
112Histidinol dehydrogenase
448impB/mucB/samB family
112Ribosomal L15
112Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
11Ribosomal prokaryotic L21 protein
112Ribosomal L28 family
112Ribosomal L29 protein
112Ribosomal L39 protein
112Ribosomal S17
112Ribulose-phosphate 3 epimerase family
112Translationally controlled tumour protein
224RNA pseudouridylate synthase
549Histone deacetylase domain
134POT family
224PWWP domain
8614SET domain
224Isochorismatase family
235Permease family
112Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
5510XPG I-region
112Acetokinase family
224DNA photolyase
112Cytosol aminopeptidase family, catalytic domain
1126,7-dimethyl-8-ribityllumazine synthase
112Ribosomal protein S16
224Acyl CoA binding protein
448Cullin family
336FAD binding domain
448EamA-like transporter family
7714ThiF family
112Ribosomal family S4e
112Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
224Ammonium Transporter Family
224Sulfate permease family
112MATH domain
224Dehydratase family
224Transaldolase/Fructose-6-phosphate aldolase
112Mechanosensitive ion channel
112GTP cyclohydrolase II
1123,4-dihydroxy-2-butanone 4-phosphate synthase
437Adaptor complexes medium subunit family
112Dipeptidyl peptidase IV (DPP IV) N-terminal region
448Glycosyl hydrolase family 3 N terminal domain
112Ribosomal protein L44
112DNA-dependent RNA polymerase
112Glycosyl transferase family 4
112HCO3- transporter family
224Nucleosome assembly protein (NAP)
112GMP synthase C terminal domain
235Adenosine/AMP deaminase
448Oxidoreductase FAD-binding domain
112Thioesterase domain
224Histidine biosynthesis protein
224Glycosyltransferase family 20
112UDP-glucose/GDP-mannose dehydrogenase family, central domain
224Carbamoyl-phosphate synthase small chain, CPSase domain
448Sec1 family
224GDP dissociation inhibitor
6612Sodium/hydrogen exchanger family
224RNA polymerase Rpb3/RpoA insert domain
336Initiation factor 2 subunit family
224Electron transfer flavoprotein domain
112Ribosomal S3Ae family
112Ribosomal L27 protein
112Ribosomal L40e family
224TatD related DNase
112Inhibitor of apoptosis-promoting Bax1
112Eukaryotic DNA topoisomerase I, catalytic core
325Dynamin central region
116-O-methylguanine DNA methyltransferase, DNA binding domain
224Bacteriorhodopsin-like protein
112Carboxyl transferase domain
224UbiA prenyltransferase family
246Endoribonuclease L-PSP
112Phosphorylase superfamily
347Cys/Met metabolism PLP-dependent enzyme
235Glycosyl hydrolases family 31
112NADH ubiquinone oxidoreductase, 20 Kd subunit
369ABC-2 type transporter
213Amino-transferase class IV
448CDP-alcohol phosphatidyltransferase
358ATP dependent DNA ligase domain
347FMN-dependent dehydrogenase
112Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
1123-beta hydroxysteroid dehydrogenase/isomerase family
112Nitrite and sulphite reductase 4Fe-4S domain
112Ribosomal protein S18
11Clathrin light chain
112Galactose-1-phosphate uridyl transferase, N-terminal domain
112Ubiquitin carboxyl-terminal hydrolase, family 1
112Ribosomal protein S19e
112Ribosomal protein S6e
336Transcription factor S-II (TFIIS)
11Arthropod defensin
112Omp85 superfamily domain
235emp24/gp25L/p24 family/GOLD
112NifU-like domain
112Cyclin-dependent kinase regulatory subunit
112F-actin capping protein, beta subunit
112Fructose-bisphosphate aldolase class-II
224Semialdehyde dehydrogenase, NAD binding domain
224DNA mismatch repair protein, C-terminal domain
112Dephospho-CoA kinase
112MAPEG family
112G10 protein
112Heme oxygenase
112Succinate dehydrogenase/Fumarate reductase transmembrane subunit
112DNA topoisomerase
112Glucose inhibited division protein A
112Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
112RNA 3'-terminal phosphate cyclase
3473' exoribonuclease family, domain 1
112tRNA pseudouridine synthase D (TruD)
112Coenzyme A transferase
336SPFH domain / Band 7 family
325Cytidylyltransferase family
224GDA1/CD39 (nucleoside phosphatase) family
112GNS1/SUR4 family
112Hydroxymethylglutaryl-coenzyme A synthase N terminal
112Ribosomal protein L21e
112Ribosomal protein L36e
112Ribosomal protein L6e
224Phosphatidylethanolamine-binding protein
325RIO1 family
112Alanine racemase, N-terminal domain
112Uncharacterized protein family UPF0016
224Putative RNA methylase family UPF0020
112PP-loop family
112Shwachman-Bodian-Diamond syndrome (SBDS) protein
112SNO glutamine amidotransferase family
112Translation initiation factor 1A / IF-1
11Asp/Glu/Hydantoin racemase
336Copper amine oxidase, enzyme domain
112Dihydroorotate dehydrogenase
112Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
112GPR1/FUN34/yaaH family
231134Fungal hydrophobin
33616S rRNA methyltransferase RsmB/F
112RNA polymerase Rpb5, C-terminal domain
112RNA polymerase Rpb6
347RNA polymerase Rpb3/Rpb11 dimerisation domain
11RNA polymerases N / 8 kDa subunit
112Peptidyl-tRNA hydrolase
112Ribosomal protein L17
112Ribosomal protein L31e
112Ribosomal protein L34e
112Ribosomal protein S28e
224Ribosomal protein S8e
224Shikimate kinase
224Uncharacterized protein family UPF0029
336Dihydrouridine synthase (Dus)
112Uroporphyrinogen decarboxylase (URO-D)
112ubiE/COQ5 methyltransferase family
224NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
235Beta-eliminating lyase
112Adenylate cyclase associated (CAP) N terminal
224Casein kinase II regulatory subunit
112Cytochrome c oxidase subunit Vb
347Clathrin adaptor complex small chain
112Coproporphyrinogen III oxidase
112Dynein light chain type 1
235Ergosterol biosynthesis ERG4/ERG24 family
112DNA/RNA non-specific endonuclease
112GTP cyclohydrolase I
336HIT domain
112Indoleamine 2,3-dioxygenase
112Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain
448Oxysterol-binding protein
112Phosphomannose isomerase type I
224Protein prenyltransferase alpha subunit repeat
224Pyridoxamine 5'-phosphate oxidase
112Membrane dipeptidase (Peptidase family M19)
224Ribosomal protein L24e
112Ribosomal protein L35Ae
6511Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
112Ribosomal protein S21e
112Ribosomal protein S7e
336Translation initiation factor SUI1
112Putative undecaprenyl diphosphate synthase
112Carbohydrate kinase
112Thioredoxin-like [2Fe-2S] ferredoxin
112SAICAR synthetase
112Xylose isomerase-like TIM barrel
112Alanine dehydrogenase/PNT, C-terminal domain
224Aldose 1-epimerase
112Chorismate synthase
123Cytochrome c/c1 heme lyase
91221FAD dependent oxidoreductase
112F-actin capping protein alpha subunit
112Formate--tetrahydrofolate ligase
112Malate synthase
112Ribosomal protein L19e
112Ribosomal protein S24e
112Ribosomal protein S26e
112TEA/ATTS domain
11XPA protein N-terminal
112Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold
1127,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
112Phosphoenolpyruvate carboxykinase
112Ribosomal protein L13e
112Telomere recombination
437CAP-Gly domain
123Creatinase/Prolidase N-terminal domain
11Peroxidase, family 2
112Pterin 4 alpha carbinolamine dehydratase
112mRNA capping enzyme, catalytic domain
7714OB-fold nucleic acid binding domain
437Kelch motif
112Ribonuclease HII
347FYVE zinc finger
224DHH family
448Sec7 domain
91120NAD dependent epimerase/dehydratase family
11Porphobilinogen deaminase, dipyromethane cofactor binding domain
112SIS domain
112Phosphate transporter family
336ARID/BRIGHT DNA binding domain
112Clathrin propeller repeat
6713JAB1/Mov34/MPN/PAD-1 ubiquitin protease
111021PCI domain
112tRNA synthetases class I (C) catalytic domain
7714Oxidoreductase family, NAD-binding Rossmann fold
224tRNA synthetases class II core domain (F)
112tRNA synthetases class II (A)
459Putative GTPase activating protein for Arf
224tRNA pseudouridine synthase
224ENTH domain
112Reprolysin (M12B) family zinc metalloprotease
112NF-X1 type zinc finger
121527LSM domain
224R3H domain
112BAH domain
112Peptidase family M13
112Peptidase family M3
336Peptidase family M1 domain
112Peptidase family M41
224Peptidase family M48
112Acetohydroxy acid isomeroreductase, catalytic domain
112Low molecular weight phosphotyrosine protein phosphatase
112MAGE family
224Eukaryotic porin
112Skp1 family, dimerisation domain
437PUA domain
224LysM domain
448S4 domain
112PWI domain
112Proprotein convertase P-domain
213IBR domain, a half RING-finger domain
112Type I 3-dehydroquinase
112Shikimate / quinate 5-dehydrogenase
91221Transmembrane amino acid transporter protein
112Frataxin-like domain
224FAD binding domain
112V-type ATPase 116kDa subunit family
112Glycosyl transferase family 8
112Phosphoribosyl-AMP cyclohydrolase
112Phosphoribosyl-ATP pyrophosphohydrolase
224Phosphatidylinositol-4-phosphate 5-Kinase
123Phosphoadenosine phosphosulfate reductase family
224TruB family pseudouridylate synthase (N terminal domain)
112Respiratory-chain NADH dehydrogenase 51 Kd subunit
224ATP-NAD kinase
224Iron-sulphur cluster biosynthesis
6612Polysaccharide deacetylase
7512DHHC palmitoyltransferase
224Glycosyl hydrolase family 47
8715PPR repeat
112Adenosylmethionine decarboxylase
5510CorA-like Mg2+ transporter protein
4610Cation efflux family
4610Peptidase family M20/M25/M40
448DnaJ C terminal domain
224Fumarylacetoacetate (FAA) hydrolase family
11Pyruvate ferredoxin/flavodoxin oxidoreductase
112Spermine/spermidine synthase domain
4711FAD binding domain
112Natural resistance-associated macrophage protein
549PAP2 superfamily
224Aminomethyltransferase folate-binding domain
224MaoC like domain
224Adenylylsulphate kinase
6612G-patch domain
112Putative tRNA binding domain
437GAF domain
112NifU-like N terminal domain
538Flavin containing amine oxidoreductase
112Cyclin M transmembrane N-terminal domain
112Glycine cleavage H-protein
112Ribosomal protein S27a
8816Adaptin N terminal region
112Protein phosphatase 2A regulatory B subunit (B56 family)
112I/LWEQ domain
2243'-5' exonuclease
112Proline dehydrogenase
336MutS domain I
112Peptide methionine sulfoxide reductase
11Hpt domain
112Choline/ethanolamine kinase
112ATP phosphoribosyltransferase
112SelR domain
336Chitin synthase
2244'-phosphopantetheinyl transferase superfamily
112Peptidase C13 family
336Eukaryotic initiation factor 4E
112Ribosomal protein L32
112Myo-inositol-1-phosphate synthase
112Macro domain
112Type I phosphodiesterase / nucleotide pyrophosphatase
112Ribosomal protein S27
358Proteolipid membrane potential modulator
112SOR/SNZ family
112Riboflavin kinase
246Rhomboid family
336Sodium/calcium exchanger protein
224UTP--glucose-1-phosphate uridylyltransferase
112Transcriptional regulator
336Smr domain
112IPP transferase
112Cobalamin-independent synthase, Catalytic domain
235BolA-like protein
112Ham1 family
112FtsJ-like methyltransferase
112Quinolinate phosphoribosyl transferase, C-terminal domain
112Nucleoside transporter
112Patatin-like phospholipase
213Lysophospholipase catalytic domain
336Dienelactone hydrolase family
224STAS domain
112Poly A polymerase head domain
112tRNA (Guanine-1)-methyltransferase
112Importin beta binding domain
112Toprim domain
224MYND finger
134Sodium Bile acid symporter family
1123-dehydroquinate synthase
336Lipase (class 3)
112Ribosome recycling factor
11Na+ dependent nucleoside transporter N-terminus
112UreD urease accessory protein
112Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A
112Ribosomal L22e protein family
112Ribosomal L27e protein family
112Ribosomal L28e protein family
112Ribosomal L29e protein family
112Ribosomal L37ae protein family
112Ribosomal L38e protein family
11Ribosomal L32p protein family
112NIF3 (NGG1p interacting factor 3)
112Alternative oxidase
224Glycolipid 2-alpha-mannosyltransferase
7714Ferric reductase like transmembrane component
336snoRNA binding domain, fibrillarin
112Surp module
112AICARFT/IMPCHase bienzyme
1125-formyltetrahydrofolate cyclo-ligase family
112ATP synthase subunit D
112IPT/TIG domain
325ACT domain
224DIL domain
224FF domain
224NAC domain
336Proteasome/cyclosome repeat
112START domain
336MOZ/SAS family
11Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
224Putative diphthamide synthesis protein
11Domain of unknown function UPF0086
11RibD C-terminal domain
224Domain found in IF2B/IF5
112Memo-like protein
112RNase P subunit p30
112Iron-sulfur cluster assembly protein
112RNA 2'-phosphotransferase, Tpt1 / KptA family
112Uncharacterised protein family UPF0047
112DNA primase small subunit
11Rpp14/Pop5 family
112Diphthamide synthase
11Putative heavy-metal-binding
112Ribosomal protein L37e
246Nucleotidyltransferase domain
112Thiamine-binding protein
112eIF-6 family
448Glycosyl hydrolase family 3 C-terminal domain
112Deoxyhypusine synthase
448Prefoldin subunit
112SRP19 protein
12112350S ribosome-binding GTPase
112Ribosomal protein L14
224Protein of unknown function DUF89
112Integral membrane protein DUF92
112Thi4 family
112ArgJ family
224DJ-1/PfpI family
336HD domain
224tRNA intron endonuclease, catalytic C-terminal domain
11Survival protein SurE
358Amidohydrolase family
112Peptidyl-tRNA hydrolase PTH2
112Double-stranded DNA-binding domain
112VIT family
112ATP synthase (F/14-kDa) subunit
112ATP synthase (E/31 kDa) subunit
112ATP synthase (C/AC39) subunit
224Translin family
112TFIIE alpha subunit
112N2,N2-dimethylguanosine tRNA methyltransferase
112SCP-2 sterol transfer family
336SAP domain
11Arsenical pump membrane protein
112CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B
112Cytochrome c oxidase subunit VIa
112MAS20 protein import receptor
11Pheromone A receptor
112SURF4 family
112Palmitoyl protein thioesterase
22460Kd inner membrane protein
11Ornithine decarboxylase antizyme
11Deuterolysin metalloprotease (M35) family
112SURF1 family
112DAD family
112Hydroxyethylthiazole kinase family
112cAMP phosphodiesterases class-II
112RHO protein GDP dissociation inhibitor
112Aminopeptidase I zinc metalloprotease (M18)
224Permease for cytosine/purines, uracil, thiamine, allantoin
336Nuclear transport factor 2 (NTF2) domain
112Adenosine-deaminase (editase) domain
224MGS-like domain
112Repair protein Rad1/Rec1/Rad17
448Sir2 family
224Zn-finger in ubiquitin-hydrolases and other protein
112Kinase associated domain 1
123RNA polymerases M/15 Kd subunit
11Dihydroneopterin aldolase
112Prephenate dehydrogenase
112Peptidase family M50
112Cytochrome C1 family
22PAZ domain
11Piwi domain
257AT hook motif
11BAG domain
112Formin Homology 2 Domain
112HAT (Half-A-TPR) repeat
224Hr1 repeat
224Growth-Arrest-Specific Protein 2 Domain
112ATP-dependent protease La (LON) substrate-binding domain
112PXA domain
112STE like transcription factor
112SWIB/MDM2 domain
224Vacuolar sorting protein 9 (VPS9) domain
213WH2 motif
213Putative zinc finger in N-recognin (UBR box)
224Dynamin GTPase effector domain
213GYF domain
224Methylenetetrahydrofolate reductase
112ML domain
112ATP-grasp domain
112Thymidylate kinase
112Transcriptional Coactivator p15 (PC4)
112RFX DNA-binding domain
112FAT domain
314FATC domain
112Transcription initiation factor IIA, gamma subunit, helical domain
112Transcription initiation factor IID, 18kD subunit
112TFIIF, beta subunit HTH domain
112Ubiquinol-cytochrome C reductase complex 14kD subunit
112DHHA1 domain
112Cytochrome c oxidase subunit Va
112Transcription initiation factor IID, 31kD subunit
112Alpha adaptin AP2, C-terminal domain
11Cytochrome oxidase c subunit VIb
224HORMA domain
112Ubiquinol-cytochrome C reductase hinge protein
112Mitochondrial glycoprotein
347OTU-like cysteine protease
112Glycine cleavage system P-protein
224Mycolic acid cyclopropane synthetase
112Cell division protein 48 (CDC48), N-terminal domain
2241,3-beta-glucan synthase component
336Dolichyl-phosphate-mannose-protein mannosyltransferase
448JmjC domain, hydroxylase
112Anion-transporting ATPase
224jmjN domain
336SacI homology domain
112Cation transport protein
112Putative methyltransferase
123Seryl-tRNA synthetase N-terminal domain
11Ornithine cyclodeaminase/mu-crystallin family
112Conserved carboxylase domain
112Lecithin:cholesterol acyltransferase
11Transferase family
7512RecF/RecN/SMC N terminal domain
448Tim17/Tim22/Tim23/Pmp24 family
336Fasciclin domain
112Met-10+ like-protein
11CLN3 protein
448CobW/HypB/UreG, nucleotide-binding domain
112CoA-transferase family III
112Oligosaccharyl transferase STT3 subunit
11CPBP intramembrane metalloprotease
81018Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
11Type IV secretory system Conjugative DNA transfer
549ZIP Zinc transporter
112CrcB-like protein, Camphor Resistance (CrcB)
112Hydantoinase B/oxoprolinase
112NAD synthase
2243-oxo-5-alpha-steroid 4-dehydrogenase
112Maf-like protein
112Ketopantoate hydroxymethyltransferase
112Acyl-CoA thioesterase
145Ketopantoate reductase PanE/ApbA
112OsmC-like protein
112Phenazine biosynthesis-like protein
112Pantoate-beta-alanine ligase
11Homocysteine S-methyltransferase
112D-Tyr-tRNA(Tyr) deacylase
112Thiamine monophosphate synthase
336Uncharacterised ACR, YagE family COG1723
112GlcNAc-PI de-N-acetylase
11SOS response associated peptidase (SRAP)
112Uroporphyrinogen-III synthase HemD
112ATP-dependent Clp protease adaptor protein ClpS
112Cytochrome oxidase assembly protein
224CoA binding domain
123Putative S-adenosyl-L-methionine-dependent methyltransferase
224GatB domain
224Phosphatidylserine decarboxylase
4610Taurine catabolism dioxygenase TauD, TfdA family
112Paired amphipathic helix repeat
112Uncharacterized ACR, YdiU/UPF0061 family
448Calcium-dependent channel, 7TM region, putative phosphate
112CDC45-like protein
213Copper amine oxidase, N2 domain
112Copper amine oxidase, N3 domain
224Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
112SKIP/SNW domain
112ERCC4 domain
224Dak1 domain
224DAK2 domain
224Ku70/Ku80 beta-barrel domain
437Myosin N-terminal SH3-like domain
1123-hydroxyacyl-CoA dehydrogenase, NAD binding domain
112Galactose-1-phosphate uridyl transferase, C-terminal domain
112Proliferating cell nuclear antigen, C-terminal domain
112Quinolinate phosphoribosyl transferase, N-terminal domain
112Transcription initiation factor IIA, gamma subunit
224Arrestin (or S-antigen), C-terminal domain
224AIR synthase related protein, C-terminal domain
336Acyl-CoA dehydrogenase, middle domain
224Acyl-CoA dehydrogenase, N-terminal domain
112S-adenosylmethionine synthetase, central domain
112S-adenosylmethionine synthetase, C-terminal domain
224Semialdehyde dehydrogenase, dimerisation domain
224Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
224Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
336Iron/manganese superoxide dismutases, C-terminal domain
5510Transketolase, pyrimidine binding domain
336Transketolase, C-terminal domain
112Glucose-6-phosphate dehydrogenase, C-terminal domain
224FGGY family of carbohydrate kinases, C-terminal domain
112Pyridoxal-dependent decarboxylase, pyridoxal binding domain
224Biotin carboxylase C-terminal domain
448Carbamoyl-phosphate synthase L chain, ATP binding domain
224Carbamoyl-phosphate synthetase large chain, oligomerisation domain
11Cytosol aminopeptidase family, N-terminal domain
112DDT domain
11Mago nashi protein
7613Glutathione S-transferase, N-terminal domain
112Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain
112Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
112Beta-ketoacyl synthase, C-terminal domain
224Thiolase, C-terminal domain
336Ubiquitin interaction motif
112PHP domain
112Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
336MIR domain
224e3 binding domain
112ATP synthase, Delta/Epsilon chain, beta-sandwich domain
336TGS domain
459D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
11DHHA2 domain
224Glycosyl hydrolases family 2, sugar binding domain
112Glycosyl hydrolase family 20, domain 2
112Prp18 domain
112Phosphoribosylglycinamide synthetase, C domain
112Phosphoribosylglycinamide synthetase, N domain
549CUE domain
224MA3 domain
224Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
5510MIF4G domain
112Clp amino terminal domain, pathogenicity island component
224lactate/malate dehydrogenase, alpha/beta C-terminal domain
112Ribonucleotide reductase, barrel domain
448ATP synthase alpha/beta family, beta-barrel domain
336Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
325Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
224Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
123SRP54-type protein, helical bundle domain
112Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
224Adaptin C-terminal domain
112Glycosyl transferase family, helical bundle domain
112Pyruvate kinase, alpha/beta domain
437Sec63 Brl domain</