Due to a planned NERSC power outage, JGI portals will be unavailable 6:00am PDT July 10 - 11:59pm PDT July 14. System Status updates available here.
PFAM Domains • Fusarium oxysporum MRL8996 v1.0
Annotations/GenomesFoxMRL8996Fusox2Fusox32931FusoxFo47FusoxT415Fusoxcon1Fusoxcub1Fusoxlyc1Fusoxmel1Fusoxpis1Fusoxrad1Fusoxrap1Fusoxvas1Fusoxy1Fusoxys1TotalAnnotation Description
PFAMs
15,17818,71021,91222,90916,43022,75321,20122,33023,62323,81722,65522,53722,57615,99516,307308,933
11111111111111147 transmembrane receptor (rhodopsin family)
46847788776643857 transmembrane receptor (Secretin family)
5869707158747073726974717154611,015ATPase family associated with various cellular activities (AAA)
751091301379111511213013413013212212687921,722ABC transporter
477687667116981411117ATP synthase alpha/beta family, nucleotide-binding domain
152530281527282730292829291515370Elongation factor Tu GTP binding domain
1712344362166544866445043422021695Helix-loop-helix DNA-binding domain
6165777466886764103Hsp20/alpha crystallin family
151328271629282731292628311518361Hsp70 protein
72321248252222232324242587286KH domain
11SH2 domain
154739401439364040383939381413491SH3 domain
112926301028282929283028281111356Actin
44220655450615160667161665749621,037Ankyrin repeat
5236648765769766111PAN domain
111819191119181520191819191111247ADP-ribosylation factor family
202225282226282830252728282522384Eukaryotic aspartyl protease
4181515514914141515181355179Cyclic nucleotide-binding domain
11114Beta/Gamma crystallin
11211211111211118Cytochrome c
12221222222221126Double-stranded RNA binding motif
230332333333332268EF hand
32222222222234Fe-4S binding domain
12112221121111221Fibronectin type III domain
45443442443443557Globin
172321222030252224272324222219341Glutathione S-transferase, C-terminal domain
11441444544441146Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
52211115111111111111121055152Homeodomain
53614167171515221817161777229lactate/malate dehydrogenase, NAD binding domain
11Low-density lipoprotein receptor repeat class B
488958888988846109Myosin head (motor domain)
1702091941961852091721951992181992121961551582,867Cytochrome P450
1753053473521723803313653523613653703571591804,571Protein kinase domain
193726282126232429272728261918378Pyridine nucleotide-disulphide oxidoreductase
264958592955555754575857512931725Ras family
234152582953494957635257572628694Response regulator receiver domain
65113112211116335RNase H
531181201215313010712311912412412512752521,548RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
211111112112Reverse transcriptase (RNA-dependent DNA polymerase)
33444444343473458Copper/zinc superoxide dismutase (SODC)
23332333333332241Iron/manganese superoxide dismutases, alpha-hairpin domain
383956574241445345485340354045676Subtilase family
1772252242432022372282132672442302182311952003,334Sugar (and other) transporter
191920201919191922211921221919297Thioredoxin
35332322323342343Trypsin
6910128910991411119127146Tubulin/FtsZ family, GTPase domain
320111215211221144von Willebrand factor type A domain
48205675748755862636657726743351,023Zinc finger, C2H2 type
587910598101091010556198Zinc finger, C3HC4 type (RING finger)
22514123101312121414131431162Zinc knuckle
24442244434332247Protein-tyrosine phosphatase
1932762212542292662482302662712382472692362143,658short chain dehydrogenase
1011601311461291501401301461621401401511221192,067Zinc-binding dehydrogenase
71211111010910101110101078146Thiolase, N-terminal domain
162117161515171817151514141416240Beta-ketoacyl synthase, N-terminal domain
5867687778767561002Fe-2S iron-sulfur cluster binding domain
16661666666661170Enolase, C-terminal TIM barrel domain
112225221126232523262626261212316Glutamine amidotransferase class-I
101514171017161717171717171010221TCP-1/cpn60 chaperonin family
48764889876674496Glutamine synthetase, catalytic domain
12221222222221126Triosephosphate isomerase
454654473350455648515750483534699E1-E2 ATPase
88109899999910978131Core histone H2A/H2B/H3/H4
9141615111213141614141212910191Alpha amylase, catalytic domain
23332323333332139Phorbol esters/diacylglycerol binding domain (C1 domain)
91512128121313121312121189171Bacterial transferase hexapeptide (six repeats)
581010511109111010101155130tRNA synthetases class I (I, L, M and V)
162722261125282926252926251311339Cyclin, N-terminal domain
365843504849404555524852484343710Carboxylesterase family
46654565556544474DNA polymerase family B
55645565955555580ATP synthase subunit C
61289811811999121166135Peroxidase
222424303129212021312528262226380Beta-lactamase
22222222222222230C-5 cytosine-specific DNA methylase
266146492742474851464847462426634Calcineurin-like phosphoesterase
231522222423212022232323221919321Cellulase (glycosyl hydrolase family 5)
13131211711913121115111187164tRNA synthetases class II (D, K and N)
4410097103499410010110195103919451491,272Mitochondrial carrier protein
1211112111113recA bacterial DNA recombination protein
324448523848445056524947483735680Aminotransferase class I and II
6159948687799775116Phosphoribosyl transferase domain
101617171017151616171717171010222Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
12111111111111116Phosphoglycerate kinase
22222222222222230Ribosomal protein S4/S9 N-terminal domain
22222222222222230Ribosomal protein S12/S23
1111111111111114Bacterial regulatory helix-turn-helix proteins, AraC family
11111111111111115Chaperonin 10 Kd subunit
123025251325242326242025251213322C2 domain
103831298372928292927293088370PH domain
265047524456394667635053574654750bZIP transcription factor
486259737068545667806463626360949Aldehyde dehydrogenase family
52882576783164077570880485588482676877961961811,227Fungal Zn(2)-Cys(6) binuclear cluster domain
314547503646434647564745503831658Cytochrome b5-like Heme/Steroid binding domain
6141314101212141516141314810185Oxidoreductase molybdopterin binding domain
255038412839383740423940432728555Oxidoreductase NAD-binding domain
305150532753475457505354563027692SNF2 family N-terminal domain
23322322332332237Ribosomal protein S7p/S5e
214237412134413243333934342120493Ubiquitin-conjugating enzyme
111921201019202020202020211011262Isocitrate/isopropylmalate dehydrogenase
23432334343342245Ribosomal Proteins L2, RNA binding domain
13331333333331137Hsp90 protein
23322332332332238Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111111111111115Dihydrofolate reductase
894568349677898101Chitin recognition protein
8177778715119712954133Cysteine-rich secretory protein family
11111111111111115Ribosomal protein S3, C-terminal domain
8799889898989810127Cupin
23332333333332241Annexin
34334433653333353Eukaryotic-type carbonic anhydrase
22221222222221127Chalcone and stilbene synthases, N-terminal domain
657756777776845942-oxoacid dehydrogenases acyltransferase (catalytic domain)
777786777877877107Catalase
21222222222222229Disintegrin
11514171514141820191714161314221UDP-glucoronosyl and UDP-glucosyl transferase
151921171421161719161816161617258Aminotransferase class-III
24552555555452261Ribosomal protein S19
12221222222221126DNA gyrase B
122117161320161619171616161313241Thiamine pyrophosphate enzyme, central domain
7141315813915171315121298180Lyase
26662866666772278Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
46333334334434353Sodium:neurotransmitter symporter family
121121221215Ferritin-like domain
11511563353551146Adenylate and Guanylate cyclase catalytic domain
11122211122323428ATP synthase delta (OSCP) subunit
11111111111111115Orotidine 5'-phosphate decarboxylase / HUMPS family
11111111111111115Indole-3-glycerol phosphate synthase
22232233422222235Aromatic amino acid lyase
13321322232331132Pyruvate kinase, barrel domain
101818181017181818181818181010237Kinesin motor domain
314436372941363939373741362730540DnaJ domain
142220211422222222222122211414293Proteasome subunit
7118971089899118108132Major intrinsic protein
13331333333331137ATP synthase
56567676676566791Glycosyl hydrolase family 1
155515555555511593'5'-cyclic nucleotide phosphodiesterase
11111111111111115Profilin
21332333333332239Ribosomal protein L22p/L17e
22222222222222230Ribosomal protein L14p/L23e
102213121014151514141315131010200Ubiquitin family
8510107101111101010101089139Cofilin/tropomyosin-type actin-binding protein
361317513121412141313114715714-3-3 protein
26332333333332244Alkaline phosphatase
99111191191191111111099150Zinc carboxypeptidase
424846474951454853524747484544712Aldo/keto reductase family
102314561171685260715370711211653Myb-like DNA-binding domain
4109104981299810844118Forkhead domain
81612131016121014101214101010177Glycosyl hydrolases family 32 N-terminal domain
21442334434332244Ribosomal protein L16p/L10e
22222222222222230Ribosomal protein S14p/S29e
34333433443443351FKBP-type peptidyl-prolyl cis-trans isomerase
11111111111111115Glutathione peroxidase
22
112622241123222325242324241213307Flavodoxin
11Protamine P1
11111111111111115Calreticulin family
181519191817171716201718171615259Common central domain of tyrosinase
1012131291213131312131212911176Aminotransferase class-V
12221221222221125Ribonucleotide reductase, small chain
536864715274677078727472765149991DEAD/DEAH box helicase
891291151268312911512513312212613213284861,726Helicase conserved C-terminal domain
1111117311311124EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
23332333333332241Ribosomal protein L23
24222224422412237Pyridoxal-dependent decarboxylase, C-terminal sheet domain
12111111111111116Ribosomal protein L5
131518181718171719221719171313253Pyridoxal-dependent decarboxylase conserved domain
43444444444444459Citrate synthase, C-terminal domain
5911115111211121111111155141GHMP kinases N terminal domain
798978889889877120Biotin carboxylase, N-terminal domain
11111111111111115Tryptophan synthase alpha chain
202123242324232425272424232322350Pyridoxal-phosphate dependent enzyme
172618171620171917171817171616268NUDIX domain
615119887991088867129pfkB family carbohydrate kinase
121514131214131413121218141014200Glycosyl hydrolases family 28
41554445545444462Luciferase-like monooxygenase
25552555555552263Ribosomal protein L3
22221222222221228Ribosomal protein L11, RNA binding domain
193835322038333439342930341924458Histidine phosphatase superfamily (branch 1)
33231323333441240Thymidylate synthase
22233222222333336Lipoxygenase
477677667106981411115ATP synthase alpha/beta chain, C terminal domain
56665666676774588Calponin homology (CH) domain
310553455545443267Glutamine amidotransferases class-II
22222222222222230Ribosomal protein S15
11112111111112117Thaumatin family
23332333333332241Fructose-1-6-bisphosphatase, N-terminal domain
11221212222221124Ribonucleotide reductase, all-alpha domain
22222222222222230Ribosomal protein S2
46234633333533253SRF-type transcription factor (DNA-binding and dimerisation domain)
112623261227192426272326271215324GATA zinc finger
4312460554251595860595755614344871Amino acid permease
9812111311131112151211121312175Prolyl oligopeptidase family
22222222222222230Ribosomal protein L30p/L7e
112321211118171921192021241113270Histidine phosphatase superfamily (branch 2)
11111111111111115Respiratory-chain NADH dehydrogenase, 30 Kd subunit
6999688881099967121Aconitase family (aconitate hydratase)
55566555656356679Glycosyl hydrolase family 10
35443444644443359Glycosyl hydrolases family 17
22222222222222230Ribosomal protein S5, N-terminal domain
11111111111111115Nucleoside diphosphate kinase
1111111112111115Tetraspanin family
21222222222222229Ribosomal protein S10p/S20e
71387676688861086114Arrestin (or S-antigen), N-terminal domain
12221222222221126Phosphoglucose isomerase
12221222222221126Carbohydrate phosphorylase
12221222222221126SecY translocase
11111111111111115Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22332333333332240Ribosomal protein L6
669868586797745101Polyprenyl synthetase
81523286282728283128272966318Hexokinase
181335371727293331422926332117408Dynamin family
11111111111111115Transcription factor TFIID (or TATA-binding protein, TBP)
121511111110111012111111131212173Rieske [2Fe-2S] domain
1221222222211123Phytochrome region
112Proton-conducting membrane transporter
111314161114131515151514161011203Biotin-requiring enzyme
12221222222221126Phosphofructokinase
22222222222222230Ribosomal protein S17
48338666696777187Hydroxymethylglutaryl-coenzyme A reductase
4121615423171514239231544198FGGY family of carbohydrate kinases, N-terminal domain
11111121111111116Sodium:dicarboxylate symporter family
192327292130302926282926312624398Enoyl-CoA hydratase/isomerase
22222222222222230Ribosomal protein S9/S16
22222222222222230Transcription factor TFIIB repeat
891111911111191211121188152Cytidine and deoxycytidylate deaminase zinc-binding region
21222232222222230Molybdopterin oxidoreductase
184626321837263532303039371520441Chromo (CHRromatin Organisation MOdifier) domain
71310118108101211891078142Phosphatidylinositol-specific phospholipase C, Y domain
10161314101311121513111213912184Phosphatidylinositol-specific phospholipase C, X domain
163118181819181819211818181715282D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
22682668668662276Malic enzyme, N-terminal domain
111111211212112331PEP-utilising enzyme, mobile domain
544554645645655736-phosphogluconate dehydrogenase, C-terminal domain
212922231521252425202421211917327Multicopper oxidase
121215151114151415141414141111201WW domain
21222222222222229Ribosomal RNA adenine dimethylase
11Yeast PIR protein repeat
1152001861991261961821901982021971991971251392,651WD domain, G-beta repeat
2692297971698208687171Heavy-metal-associated domain
44444436464443462Adenylate kinase
22332323333332239Phosphoglucomutase/phosphomannomutase, C-terminal domain
22332333333332240Ribosomal protein S8
22332333333332240Ribosomal protein S11
55665666677765588LIM domain
2122121311