PFAM Domains • Phanerochaete chrysosporium RP-78 v2.2
Annotations/GenomesAntsi1Bjead1_1Cersu1Dicsq1Fompi3Gansp1Glotr1_1Lenti6_1Phaca1Phchr1Phchr2Phlbr1PosplRSB12_1Trave1Triab1_1Wolco1TotalAnnotation Description
PFAMs
7,3678,5587,6368,0728,1748,2657,9068,8428,2095,9278,2289,1607,7468,6148,6057,825129,134
40504544504250464938475342474747737ATPase family associated with various cellular activities (AAA)
41464838473935514850495346455138725ABC transporter
444444444444444464ATP synthase alpha/beta family, nucleotide-binding domain
1111111119EGF-like domain
14151414141414141315171614141614232Elongation factor Tu GTP binding domain
1112101016121111911111311111011180Helix-loop-helix DNA-binding domain
7751479141156985987131Hsp20/alpha crystallin family
78814169911778129777146Hsp70 protein
78814888878889897133KH domain
11Ribulose bisphosphate carboxylase large chain, catalytic domain
11111111111111115SH2 domain
26262524252825252422222621252921394SH3 domain
11TNFR/NGFR cysteine-rich region
1010111010101210106101310101310165Actin
28223817282429243422253329262330432Ankyrin repeat
77677777567777137114ADP-ribosylation factor family
36554144404931476853595645533739753Eukaryotic aspartyl protease
333333334333433350Cyclic nucleotide-binding domain
22Cytochrome b(C-terminal)/b6/petD
22Cytochrome b/b6/petB
113111111111111118Cytochrome c
871077778435595146112Double-stranded RNA binding motif
16221719172018202024232115182216308EF hand
1111111112111222204Fe-4S binding domain
111111111111113Fibronectin type III domain
211111111212Globin
11261918141818193314221519251815304Glutathione S-transferase, C-terminal domain
111122121111111321Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
112Hemopexin
11117711121019579118976150Homeodomain
111115Laminin EGF domain
322242222222222235lactate/malate dehydrogenase, NAD binding domain
11Lipocalin / cytosolic fatty-acid binding protein family
655675656557447487Myosin head (motor domain)
1371892071721702031191912511131552371971851811922,899Cytochrome P450
1412011891471541601481851531201532011501862511522,691Protein kinase domain
15221316191718193416251917161519300Pyridine nucleotide-disulphide oxidoreductase
23241922252526242328282526292425396Ras family
7111089899119111299910151Response regulator receiver domain
7123852141734915142212156RNase H
657059606759687059597170626660641,029RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
216153321Reverse transcriptase (RNA-dependent DNA polymerase)
1211111111111115Copper/zinc superoxide dismutase (SODC)
224322242332232240Iron/manganese superoxide dismutases, alpha-hairpin domain
2396353534462526288Subtilase family
37303731303142343147273430313432538Sugar (and other) transporter
101278999101110101310899154Thioredoxin
454565555555554578Tubulin/FtsZ family, GTPase domain
2104472226499232472von Willebrand factor type A domain
55635350675648594752526795606154939Zinc finger, C2H2 type
62736059665951695626616755575865944Zinc finger, C3HC4 type (RING finger)
14253231134030192371141895282542520Zinc knuckle
222222223222222233Protein-tyrosine phosphatase
10369838212685941197075831011051131131111,532short chain dehydrogenase
54455664534558695557596458735362925Zinc-binding dehydrogenase
445455444667544475Thiolase, N-terminal domain
55448513222210736886Beta-ketoacyl synthase, N-terminal domain
3322333333333333462Fe-2S iron-sulfur cluster binding domain
11Papain family cysteine protease
112111111222111120Enolase, C-terminal TIM barrel domain
123Cytochrome C and Quinol oxidase polypeptide I
98779779778691079126Glutamine amidotransferase class-I
10910101010111099109910910155TCP-1/cpn60 chaperonin family
112ATP synthase A chain
362373345445433362Glutamine synthetase, catalytic domain
111111111112111117Triosephosphate isomerase
18121614161811151011121513111111214E1-E2 ATPase
14151419151614181816161815141815255Core histone H2A/H2B/H3/H4
21124212Copper binding proteins, plastocyanin/azurin family
6968678798876698118Alpha amylase, catalytic domain
546666664566565688Phorbol esters/diacylglycerol binding domain (C1 domain)
443545444464453467Bacterial transferase hexapeptide (six repeats)
333333334644233353tRNA synthetases class I (I, L, M and V)
11141312121314151014101411101010193Cyclin, N-terminal domain
1616332421251740179122416202420334Carboxylesterase family
444444444444143460DNA polymerase family B
333333333333433349ATP synthase subunit C
221171421012412171716227172201Peroxidase
473565562339675278Beta-lactamase
453435445554444366C-5 cytosine-specific DNA methylase
1113NADH dehydrogenase
29262625272424282919262724272627414Calcineurin-like phosphoesterase
111291214111112168141512131812200Cellulase (glycosyl hydrolase family 5)
56676676106676656101tRNA synthetases class II (D, K and N)
36373637384037383334383837364039594Mitochondrial carrier protein
13151618161718201613151419201416260Aminotransferase class I and II
6766666775676766100Phosphoribosyl transferase domain
14141512131413141614141414141114220Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
111111111111111116Phosphoglycerate kinase
222222222222222232Ribosomal protein S4/S9 N-terminal domain
222222222222222232Ribosomal protein S12/S23
11111111111111115Chaperonin 10 Kd subunit
13151212131214161616151615141513227C2 domain
20201622182017231818231819202121314PH domain
466545666878466491bZIP transcription factor
15192419181913142519212319171616297Aldehyde dehydrogenase family
556970776182559556358671448490661,096Fungal Zn(2)-Cys(6) binuclear cluster domain
25262523252228252223243225242229400Cytochrome b5-like Heme/Steroid binding domain
464333545446443668Oxidoreductase molybdopterin binding domain
91212121112101215131613101579188Oxidoreductase NAD-binding domain
25272621212225242812262624202426377SNF2 family N-terminal domain
222222222221232232Ribosomal protein S7p/S5e
22211820212122212120222322202021335Ubiquitin-conjugating enzyme
555565655555556583Isocitrate/isopropylmalate dehydrogenase
222222222222222232Ribosomal Proteins L2, RNA binding domain
223242222334222239Hsp90 protein
222222232222231233Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111111111111115Dihydrofolate reductase
22Chitin recognition protein
262227253122222244Cysteine-rich secretory protein family
111111211111215Ribosomal protein S3, C-terminal domain
489765461599117655116Cupin
1233211Chalcone and stilbene synthases, N-terminal domain
3333333332233333462-oxoacid dehydrogenases acyltransferase (catalytic domain)
333333434553434457Catalase
11111111121113Disintegrin
29563766561192178UDP-glucoronosyl and UDP-glucosyl transferase
455585665555555584Aminotransferase class-III
221222222222222231Ribosomal protein S19
111211111111111117DNA gyrase B
333434453333344355Thiamine pyrophosphate enzyme, central domain
333333333333333348Lyase
21111212222112122Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
111111111111111116Adenylate and Guanylate cyclase catalytic domain
1111111111111114ATP synthase delta (OSCP) subunit
111111111111113Orotidine 5'-phosphate decarboxylase / HUMPS family
121222211111211122Indole-3-glycerol phosphate synthase
222321116111112128Aromatic amino acid lyase
111111111111111116Pyruvate kinase, barrel domain
91099710109910101089118148Kinesin motor domain
29312228333230332722323032312834474DnaJ domain
14141214141414141314141513141614223Proteasome subunit
2108546659896253492Major intrinsic protein
131111111111111118ATP synthase
123423522222223138Glycosyl hydrolase family 1
1111111111111111163'5'-cyclic nucleotide phosphodiesterase
111111111112111117Profilin
222121111221212124Ribosomal protein L22p/L17e
222222222222222232Ribosomal protein L14p/L23e
13171517171914181612191319171516257Ubiquitin family
455555555465546579Cofilin/tropomyosin-type actin-binding protein
32212212222232223214-3-3 protein
133212222223134134Alkaline phosphatase
112111111111111117Zinc carboxypeptidase
47645861554862707253567959675954964Aldo/keto reductase family
13121013141213121313141413121512205Myb-like DNA-binding domain
555595555556567588Forkhead domain
24111312Glycosyl hydrolases family 32 N-terminal domain
111111111111111116Ribosomal protein L16p/L10e
221122221122222228Ribosomal protein S14p/S29e
3333123331335333357FKBP-type peptidyl-prolyl cis-trans isomerase
111111111111121117Glutathione peroxidase
222121212222121227
59965778101314126654126Flavodoxin
11Protamine P1
1113Tropomyosin
111111111121111117Calreticulin family
1643322329152245Common central domain of tyrosinase
775777710539861068112Aminotransferase class-V
212222252447232244Ribonucleotide reductase, small chain
50495352634650474444496648465651814DEAD/DEAH box helicase
8786888983758679825988115827689881,352Helicase conserved C-terminal domain
213Fructose-bisphosphate aldolase class-I
111131112112111221EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
222222232222222233Ribosomal protein L23
111111111111111116Pyridoxal-dependent decarboxylase, C-terminal sheet domain
111111111111111116Ribosomal protein L5
454443534353446465Pyridoxal-dependent decarboxylase conserved domain
434335333333433454Citrate synthase, C-terminal domain
455555553465555577GHMP kinases N terminal domain
6776676966686789110Biotin carboxylase, N-terminal domain
111111111111131118Tryptophan synthase alpha chain
888911999910108911810146Pyridoxal-phosphate dependent enzyme
1416915151515151611171514151415231NUDIX domain
344333535244334356pfkB family carbohydrate kinase
666712101012435589129124Glycosyl hydrolases family 28
222222222222222232Ribosomal protein L3
222222222222222232Ribosomal protein L11, RNA binding domain
81087887886989779127Histidine phosphatase superfamily (branch 1)
111111111112111117Thymidylate synthase
444444444444444464ATP synthase alpha/beta chain, C terminal domain
454454445454444468Calponin homology (CH) domain
555545556455455477Glutamine amidotransferases class-II
222222222123222232Ribosomal protein S15
25341310864366285489Thaumatin family
111111111111111116Fructose-1-6-bisphosphatase, N-terminal domain
111111141113122123Ribonucleotide reductase, all-alpha domain
22332222222222232Ribosomal protein S2
222223322222122233SRF-type transcription factor (DNA-binding and dimerisation domain)
1091010911101197913991110157GATA zinc finger
22262524232225252316202925242323375Amino acid permease
464464667265546681Prolyl oligopeptidase family
111211121111111118Ribosomal protein L30p/L7e
101191415141214128101812151012196Histidine phosphatase superfamily (branch 2)
11111111111111115Respiratory-chain NADH dehydrogenase, 30 Kd subunit
4544544654454551078Aconitase family (aconitate hydratase)
2465393656683610486Glycosyl hydrolase family 10
111111111111111116Glycosyl hydrolases family 17
222222232222222233Ribosomal protein S5, N-terminal domain
222222221222222231Nucleoside diphosphate kinase
21122211211211121Tetraspanin family
11Galactoside-binding lectin
222222242222222234Ribosomal protein S10p/S20e
44174828185473470Arrestin (or S-antigen), N-terminal domain
111121111111111117Phosphoglucose isomerase
111111111111111116Carbohydrate phosphorylase
111111111111111116SecY translocase
111111111111111116Respiratory-chain NADH dehydrogenase, 49 Kd subunit
221222222222222231Ribosomal protein L6
435834533346535468Polyprenyl synthetase
222222222222222232Hexokinase
787691167757106877118Dynamin family
112112111111111118Transcription factor TFIID (or TATA-binding protein, TBP)
344343544344445361Rieske [2Fe-2S] domain
11Bacterial regulatory proteins, lacI family
112Phytochrome region
11237Proton-conducting membrane transporter
87888889889889138135Biotin-requiring enzyme
111111111122111118Phosphofructokinase
222322222223222234Ribosomal protein S17
111111129111111125Hydroxymethylglutaryl-coenzyme A reductase
333334344334344354FGGY family of carbohydrate kinases, N-terminal domain
886878888897981012132Enoyl-CoA hydratase/isomerase
222222221122222230Ribosomal protein S9/S16
122423232222222235Transcription factor TFIIB repeat
8656986955888788114Cytidine and deoxycytidylate deaminase zinc-binding region
11111111111111115Molybdopterin oxidoreductase
8197118197108611017591011220Chromo (CHRromatin Organisation MOdifier) domain
111111211111114120Phosphatidylinositol-specific phospholipase C, Y domain
111112211112114122Phosphatidylinositol-specific phospholipase C, X domain
96671066866768768112D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
333323232336332448Malic enzyme, N-terminal domain
2122212222232222316-phosphogluconate dehydrogenase, C-terminal domain
72913717511105510410185138Multicopper oxidase
9108710899961197798136WW domain
221222322132222232Ribosomal RNA adenine dimethylase
1312121781921381631231462171161401431171291511392,435WD domain, G-beta repeat
445437342455453466Heavy-metal-associated domain
332333333333333347Adenylate kinase
121122122222212126Phosphoglucomutase/phosphomannomutase, C-terminal domain
122121111221111222Ribosomal protein S8
122121211112111121Ribosomal protein S11
666656666563456587LIM domain
11Matrixin
344232331333325347Regulator of chromosome condensation (RCC1) repeat
221122221222212228Ribosomal protein S13/S18
11NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
222322222222222233chorismate binding enzyme
23333333433323334760s Acidic ribosomal protein
454444444454444567Prenyltransferase and squalene oxidase repeat
67567661064667666100Protein kinase C terminal domain
1111111111111114Single-strand binding protein family
11111111111111115S-adenosylmethionine synthetase, N-terminal domain
10118811101010101091111101010159Bromodomain
88810981098991281099144Acyl-CoA dehydrogenase, C-terminal domain