PFAM Domains • Acremonium strictum DS1bioAY4a v1.0
Annotations/GenomesAcrst1Fusve1Ilysp1Necha2Trias1Triat2Triha1Trilo3TotalAnnotation Description
PFAMs
10,65610,01315,04710,1429,1179,14010,1857,52181,821
112157 transmembrane receptor (rhodopsin family)
4850725346515244416ATPase family associated with various cellular activities (AAA)
6369877656476147506ABC transporter
4444444331ATP synthase alpha/beta family, nucleotide-binding domain
11EGF-like domain
1414141414131514112Elongation factor Tu GTP binding domain
14151612121011999Helix-loop-helix DNA-binding domain
3363554332Hsp20/alpha crystallin family
9897889866Hsp70 protein
8998998969KH domain
111111118SH2 domain
2420272322212222181SH3 domain
1091171010101077Actin
62101250131117135154801,030Ankyrin repeat
12151217424268PAN domain
7888777759ADP-ribosylation factor family
1320181820202216147Eukaryotic aspartyl protease
4454444433Cyclic nucleotide-binding domain
11Cytochrome b(C-terminal)/b6/petD
111111118Cytochrome c
121111119Double-stranded RNA binding motif
1515202118181716140EF hand
1211111194Fe-4S binding domain
5223432223Fibronectin type III domain
1232222216Globin
1617271818233113163Glutathione S-transferase, C-terminal domain
111111219Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
1091212131010884Homeodomain
2443333224lactate/malate dehydrogenase, NAD binding domain
11Lipocalin / cytosolic fatty-acid binding protein family
4555454436Myosin head (motor domain)
111121187142726611666881Cytochrome P450
103117180149105112111101978Protein kinase domain
2720352422222515190Pyridine nucleotide-disulphide oxidoreductase
2224302524242422195Ras family
1519191515151413125Response regulator receiver domain
11236233342RNase H
5759625859605856469RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
229132Reverse transcriptase (RNA-dependent DNA polymerase)
112Serpin (serine protease inhibitor)
2223222217Copper/zinc superoxide dismutase (SODC)
2222223217Iron/manganese superoxide dismutases, alpha-hairpin domain
3623392927363415239Subtilase family
190159229247787490541,121Sugar (and other) transporter
1715141412121311108Thioredoxin
8243223226Trypsin
4567555542Tubulin/FtsZ family, GTPase domain
4783454439von Willebrand factor type A domain
756012712464627355640Zinc finger, C2H2 type
3735613839383939326Zinc finger, C3HC4 type (RING finger)
271865910360Zinc knuckle
2222333219Protein-tyrosine phosphatase
1961783682591601701991161,646short chain dehydrogenase
8899183155798810649847Zinc-binding dehydrogenase
7788655551Thiolase, N-terminal domain
1717261520223216165Beta-ketoacyl synthase, N-terminal domain
96665545462Fe-2S iron-sulfur cluster binding domain
11Papain family cysteine protease
1112221111Enolase, C-terminal TIM barrel domain
1113Cytochrome C and Quinol oxidase polypeptide I
91014128811880Glutamine amidotransferase class-I
10101091010101079TCP-1/cpn60 chaperonin family
4494226233Glutamine synthetase, catalytic domain
2122222215Triosephosphate isomerase
2626282817161818177E1-E2 ATPase
98128879768Core histone H2A/H2B/H3/H4
11Copper binding proteins, plastocyanin/azurin family
91088546454Alpha amylase, catalytic domain
3232121216Phorbol esters/diacylglycerol binding domain (C1 domain)
711119101210676Bacterial transferase hexapeptide (six repeats)
3347444332tRNA synthetases class I (I, L, M and V)
781112888769Cyclin, N-terminal domain
3829634520193314261Carboxylesterase family
4444444432DNA polymerase family B
5465464438ATP synthase subunit C
5654668545Peroxidase
141741351619198169Beta-lactamase
2222222216C-5 cytosine-specific DNA methylase
2929323129302728235Calcineurin-like phosphoesterase
1814151411109697Cellulase (glycosyl hydrolase family 5)
8797879762tRNA synthetases class II (D, K and N)
4342484738384035331Mitochondrial carrier protein
2725402521202818204Aminotransferase class I and II
9711128108873Phosphoribosyl transferase domain
101011101010101081Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
111111118Phosphoglycerate kinase
2222222115Ribosomal protein S4/S9 N-terminal domain
2222222216Ribosomal protein S12/S23
11443114Bacterial regulatory helix-turn-helix proteins, AraC family
111111118Chaperonin 10 Kd subunit
1417161614121415118C2 domain
1816191719171916141PH domain
1311311112121312115bZIP transcription factor
4643786526253919341Aldehyde dehydrogenase family
4702247564783252764052133,147Fungal Zn(2)-Cys(6) binuclear cluster domain
2326413524242719219Cytochrome b5-like Heme/Steroid binding domain
3545434432Oxidoreductase molybdopterin binding domain
2127352520182116183Oxidoreductase NAD-binding domain
2626363326272825227SNF2 family N-terminal domain
2222222216Ribosomal protein S7p/S5e
1918232019202021160Ubiquitin-conjugating enzyme
9889779764Isocitrate/isopropylmalate dehydrogenase
2222222216Ribosomal Proteins L2, RNA binding domain
111111118Hsp90 protein
2222222115Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111117Dihydrofolate reductase
36612655144Chitin recognition protein
5564333332Cysteine-rich secretory protein family
11111117Ribosomal protein S3, C-terminal domain
6756454441Cupin
2333333222Annexin
1332111113Eukaryotic-type carbonic anhydrase
11226Chalcone and stilbene synthases, N-terminal domain
55643433332-oxoacid dehydrogenases acyltransferase (catalytic domain)
48118777759Catalase
124311113Disintegrin
325112115UDP-glucoronosyl and UDP-glucosyl transferase
18142219108118110Aminotransferase class-III
2222222216Ribosomal protein S19
111111118DNA gyrase B
691410988569Thiamine pyrophosphate enzyme, central domain
9665435341Lyase
2222222216Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
342312Sodium:neurotransmitter symporter family
111111118Adenylate and Guanylate cyclase catalytic domain
111111118ATP synthase delta (OSCP) subunit
112111119Orotidine 5'-phosphate decarboxylase / HUMPS family
111111118Indole-3-glycerol phosphate synthase
221117Aromatic amino acid lyase
111111118Pyruvate kinase, barrel domain
11121211910101085Kinesin motor domain
2624272825262626208DnaJ domain
1414141414141414112Proteasome subunit
6655678750Major intrinsic protein
111111118ATP synthase
6695244238Glycosyl hydrolase family 1
1111111183'5'-cyclic nucleotide phosphodiesterase
111111118Profilin
11111117Ribosomal protein L22p/L17e
2222222216Ribosomal protein L14p/L23e
111016111112121396Ubiquitin family
6753555440Cofilin/tropomyosin-type actin-binding protein
225222221914-3-3 protein
8535223230Alkaline phosphatase
18987444458Zinc carboxypeptidase
3536655436364628336Aldo/keto reductase family
1312171214131513109Myb-like DNA-binding domain
4464444434Forkhead domain
97662131Glycosyl hydrolases family 32 N-terminal domain
111111118Ribosomal protein L16p/L10e
2221222215Ribosomal protein S14p/S29e
3343333426FKBP-type peptidyl-prolyl cis-trans isomerase
111111118Glutathione peroxidase
1212222214
9121713878781Flavodoxin
112Protamine P1
111111118Calreticulin family
1915185433370Common central domain of tyrosinase
1091159810769Aminotransferase class-V
111111118Ribonucleotide reductase, small chain
3734495638373836325DEAD/DEAH box helicase
8171988772747975637Helicase conserved C-terminal domain
111111118EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
2222222216Ribosomal protein L23
121111119Pyridoxal-dependent decarboxylase, C-terminal sheet domain
2222222115Ribosomal protein L5
49710987458Pyridoxal-dependent decarboxylase conserved domain
2343322221Citrate synthase, C-terminal domain
5565555339GHMP kinases N terminal domain
9689567353Biotin carboxylase, N-terminal domain
111111118Tryptophan synthase alpha chain
1716162314131512126Pyridoxal-phosphate dependent enzyme
1614261818182115146NUDIX domain
6784444643pfkB family carbohydrate kinase
47169564455Glycosyl hydrolases family 28
1113Luciferase-like monooxygenase
2222222216Ribosomal protein L3
2222222216Ribosomal protein L11, RNA binding domain
131917131111149107Histidine phosphatase superfamily (branch 1)
111111118Thymidylate synthase
312118Lipoxygenase
4444444331ATP synthase alpha/beta chain, C terminal domain
5555555439Calponin homology (CH) domain
4454456537Glutamine amidotransferases class-II
2222222216Ribosomal protein S15
1131111110Thaumatin family
2222222216Fructose-1-6-bisphosphatase, N-terminal domain
111111118Ribonucleotide reductase, all-alpha domain
2222222216Ribosomal protein S2
2222322217SRF-type transcription factor (DNA-binding and dimerisation domain)
10688888864GATA zinc finger
65651188736353932477Amino acid permease
7756337442Prolyl oligopeptidase family
2221222215Ribosomal protein L30p/L7e
1011118888771Histidine phosphatase superfamily (branch 2)
111111118Respiratory-chain NADH dehydrogenase, 30 Kd subunit
6588667450Aconitase family (aconitate hydratase)
7473212127Glycosyl hydrolase family 10
3542332224Glycosyl hydrolases family 17
2222222216Ribosomal protein S5, N-terminal domain
111111118Nucleoside diphosphate kinase
111211119Ribosomal protein S10p/S20e
3345322325Arrestin (or S-antigen), N-terminal domain
111111118Phosphoglucose isomerase
111111118Carbohydrate phosphorylase
111111118SecY translocase
111111118Respiratory-chain NADH dehydrogenase, 49 Kd subunit
2222222216Ribosomal protein L6
3343434327Polyprenyl synthetase
5454445435Hexokinase
97149101011878Dynamin family
111121119Transcription factor TFIID (or TATA-binding protein, TBP)
8101414444462Rieske [2Fe-2S] domain
11Phytochrome region
22Proton-conducting membrane transporter
1310149789676Biotin-requiring enzyme
111111118Phosphofructokinase
2222222216Ribosomal protein S17
112111119Hydroxymethylglutaryl-coenzyme A reductase
4444333328FGGY family of carbohydrate kinases, N-terminal domain
21115Sodium:dicarboxylate symporter family
1916322315152214156Enoyl-CoA hydratase/isomerase
2222222216Ribosomal protein S9/S16
2222222216Transcription factor TFIIB repeat
7878677555Cytidine and deoxycytidylate deaminase zinc-binding region
1311111211Molybdopterin oxidoreductase
79244677670Chromo (CHRromatin Organisation MOdifier) domain
6767444442Phosphatidylinositol-specific phospholipase C, Y domain
7999555554Phosphatidylinositol-specific phospholipase C, X domain
211221141010135106D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
2222222216Malic enzyme, N-terminal domain
11114PEP-utilising enzyme, mobile domain
13112221136-phosphogluconate dehydrogenase, C-terminal domain
811171210108783Multicopper oxidase
11111611111110889WW domain
111111118Ribosomal RNA adenine dimethylase
11111117Yeast PIR protein repeat
1041051391261281381471141,001WD domain, G-beta repeat
8798554551Heavy-metal-associated domain
3444435431Adenylate kinase
1212222214Phosphoglucomutase/phosphomannomutase, C-terminal domain
2112112212Ribosomal protein S8
11211118Ribosomal protein S11
5445434332LIM domain
33125115Matrixin
1222221214Regulator of chromosome condensation (RCC1) repeat
2222222216Ribosomal protein S13/S18
11NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
2322222217chorismate binding enzyme
333333332460s Acidic ribosomal protein
4445444433Prenyltransferase and squalene oxidase repeat
7674676750Protein kinase C terminal domain
111111118Single-strand binding protein family
111111118S-adenosylmethionine synthetase, N-terminal domain
77118777761Bromodomain
12122214101011596Acyl-CoA dehydrogenase, C-terminal domain
1314141514131414111Ubiquitin carboxyl-terminal hydrolase
111111118Ribosomal protein L36
2212344321Ribonuclease T2 family
3343333325HSF-type DNA-binding
2222222216SRP54-type protein, GTPase domain
21111118Urease alpha-subunit, N-terminal domain
9101717678478Serine carboxypeptidase
8788888863Phosphatidylinositol 3- and 4-kinase
3365223226Transketolase, thiamine diphosphate binding domain
10323444333Glycosyl hydrolases family 11
7575445441Inositol monophosphatase family
5543444433Glutaredoxin
75104545343Isocitrate lyase family
3333222220Serine hydroxymethyltransferase
5566226234Iron-containing alcohol dehydrogenase
2222222115Ribosomal protein L10
3226333224KOW motif
11Ribosomal protein L34
11Negative factor, (F-Protein) or Nef
2132323319RF-1 domain
4186545538Sodium:solute symporter family
111111118Imidazoleglycerol-phosphate dehydratase
111111118DNA polymerase family A
111111118IMP dehydrogenase / GMP reductase domain
111111118Glucose-6-phosphate dehydrogenase, NAD binding domain
6667667549Protein phosphatase 2C
2322333220Nucleotidyl transferase
52547913550Carbonic anhydrase
111111118Phosphoribulokinase / Uridine kinase family
7788776555Fatty acid desaturase
6566666647MutS domain V
111111118Delta-aminolevulinic acid dehydratase
7675535341Arginase family
6666666648MCM P-loop domain
2222111112Squalene/phytoene synthase
9815991010878FHA domain
53651075058495732471AMP-binding enzyme
4354333328G-protein alpha subunit
7786767856HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
131616111212119100His Kinase A (phospho-acceptor) domain
2233333322Armadillo/beta-catenin-like repeat
2226392529353622234Tetratricopeptide repeat
4243443428Ion transport protein
111111118DNA gyrase/topoisomerase IV, subunit A
91014101111111187BRCA1 C Terminus (BRCT) domain
77117666656Glycosyl transferases group 1
5759344441Glycosyl transferase family 2
1124111112SAM domain (Sterile alpha motif)
11111117linker histone H1 and H5 family
111111118Ribosomal protein L7/L12 C-terminal domain
4101812145Pectate lyase
2321322116ribonuclease
211111119Urease, gamma subunit
5754555440CoA-ligase
1724411933294214219Phosphopantetheine attachment site
3353333326Formyl transferase
10991191110978Metallopeptidase family M24
1615141415141414116Leucine Rich Repeat
6554984157698038502alpha/beta hydrolase fold
3333333324RNA polymerase Rpb2, domain 6
4444344431PB1 domain
2222222216Staphylococcal nuclease homologue
11101010101010980Rab-GTPase-TBC domain
111111118Tudor domain
11111117WH1 domain
6256445436Zinc finger, ZZ type
111111118HRDC domain
9988999970CBS domain
2222222216Ribosomal protein L13
2222222216Ribosomal protein L4/L1 family
111111118Clp protease
2443555533S1 RNA binding domain
111111118HIUase/Transthyretin family
3445544332AhpC/TSA family
4544444433tRNA synthetases class I (W and Y)
21115UvrD/REP helicase N-terminal domain
8666649651Rhodanese-like domain
2222222216Universal stress protein family
4950686155526144440Acetyltransferase (GNAT) family
111111118SecE/Sec61-gamma subunits of protein translocation complex
111111118C-terminal regulatory domain of Threonine dehydratase
2222222216AIR synthase related protein, N-terminal domain
8101099109974tRNA synthetase class II core domain (G, H, P, S and T)
111111118SpoU rRNA Methylase family
2222222216Tetrapyrrole (Corrin/Porphyrin) Methylases
111111118Glycosyl transferase family, a/b domain
111211119PDZ domain
1382112443368Class II Aldolase and Adducin N-terminal domain
4474444435Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
5553535536Fes/CIP4, and EFC/F-BAR homology domain
4444566538IQ calmodulin-binding motif
2222222216Phosphoinositide 3-kinase family, accessory domain (PIK domain)
5465665643Phospholipase D Active site motif
1242111113Regulator of G protein signaling domain
4344444431GTPase-activator protein for Ras-like GTPase
4554444434RasGEF domain
4452444431RasGEF N-terminal motif
8789888864RhoGAP domain
7575566647RhoGEF domain
3443354329SPRY domain
3343433326RNA polymerase Rpb1, domain 2
2333223220Guanylate kinase
5444444433Gelsolin repeat
789691010766UBA/TS-N domain
1514161619182015133PHD-finger
11211118GGL domain
6666666648HECT-domain (ubiquitin-transferase)
11121118Helix-hairpin-helix motif
111111118MSP (Major sperm protein) domain
3643555435Ribonuclease III domain
3231333321Region in Clathrin and VPS
2332333322RanBP1 domain
2222222216PPIC-type PPIASE domain
3232323321Zn-finger in Ran binding protein and others
1416191918162015137Zinc finger C-x8-C-x5-C-x3-H type (and similar)
2231222216Poly(ADP-ribose) polymerase catalytic domain
11111117Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
444811012158636645555F-box domain
111111118Elongation factor 1 gamma, conserved domain
44115333336Calpain family cysteine protease
2133222116Copper fist DNA binding domain
6666655545CRAL/TRIO domain
7151886671077BTB/POZ domain
11564320Ricin-type beta-trefoil lectin domain
111111118Inhibitor of Apoptosis domain
3433333325Voltage gated chloride channel
2594234231Caspase domain
2020132157105101GDSL-like Lipase/Acylhydrolase
111111118Poly-adenylate binding protein, unique domain
3032343931243624250ABC transporter transmembrane region
1010Integrase core domain
9111612767573FAD binding domain
81619102114259122Condensation domain
111111118S-adenosyl-L-homocysteine hydrolase, NAD binding domain
112111119HAMP domain
2222222115ribosomal L5P family C-terminus
6685555545Insulinase (Peptidase family M16)
5365333331Dehydrogenase E1 component
111111118Lumazine binding domain
6666666648Elongation factor G C-terminus
7676546445HMGL-like
4444444331DnaJ central domain
213Sulfotransferase domain
1232331116Starch binding domain
2222222216Ribosomal protein L1p/L10e family
14141718981110101Cation transporting ATPase, C-terminus
1816191711101212115Cation transporter/ATPase, N-terminus
1111212110dUTPase
6598767351Aconitase C-terminal domain
3544443330Amino acid kinase family
111111118N-(5'phosphoribosyl)anthranilate (PRA) isomerase
1517241520223114158Acyl transferase domain
21111118Urease beta subunit
13101913877481Dihydrodipicolinate synthetase family
4549485037353634334haloacid dehalogenase-like hydrolase
1098117910569Glycosyl hydrolases family 2
2119282326272918191Glycosyl hydrolases family 18
111111118Proliferating cell nuclear antigen, N-terminal domain
1113Translation initiation factor IF-3, C-terminal domain
1111116Acylphosphatase
1222122113Adenylosuccinate synthetase
33155111130Asparaginase, N-terminal
1132222215Peptidase S24-like
2222332117Inorganic pyrophosphatase
212024171111138125Glycosyl hydrolases family 16
2332332220Glycosyl hydrolases family 15
152330231817196151NADH:flavin oxidoreductase / NADH oxidase family
35355442313-hydroxyacyl-CoA dehydrogenase, C-terminal domain
3324333324Glycosyl hydrolase family 20, catalytic domain
5447454538HhH-GPD superfamily base excision DNA repair protein
111121119AIR carboxylase
2624353213121812172GMC oxidoreductase
2232223218Asparagine synthase
3613141222212114153Fungal cellulose binding domain
6565555542Septin
1112112110EF-1 guanine nucleotide exchange domain
3113111112Homoserine dehydrogenase
1772322226Flavin-binding monooxygenase-like
112LPXTG cell wall anchor motif
4333333325tRNA synthetases class I (E and Q), catalytic domain
3243111116tRNA synthetases class I (R)
5344444432XPG N-terminal domain
1813423115152611171Metallo-beta-lactamase superfamily
333232117F5/8 type C domain
5224333224Choline/Carnitine o-acyltransferase
1111212110Putative esterase
111111118Ferrochelatase
2322222217Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1222221214Arginosuccinate synthase
211111119Electron transfer flavoprotein FAD-binding domain
3