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PFAM Domains • Fusarium oxysporum F10-03 v1.0
Annotations/GenomesFoxF1003_1FoxF1004_1FoxF1010_1FoxF201_1FoxF202_1FoxF204_1FoxF206_1FoxF207_1Fusox2Fusox32931TotalAnnotation Description
PFAMs
16,14616,91115,88216,64016,54916,65916,42816,31018,71021,912172,147
1111111111107 transmembrane receptor (rhodopsin family)
555454446427 transmembrane receptor (Secretin family)
58575656555757576970592ATPase family associated with various cellular activities (AAA)
8483848490828987109130922ABC transporter
131813161515201877142ATP synthase alpha/beta family, nucleotide-binding domain
16151615151515152530177Elongation factor Tu GTP binding domain
253527262328242112344376Helix-loop-helix DNA-binding domain
4444656616560Hsp20/alpha crystallin family
16161517161517181328171Hsp70 protein
777778772321101KH domain
11SH2 domain
15141414131313134739195SH3 domain
11111111111111112926143Actin
506951565658575722065739Ankyrin repeat
5454444423663PAN domain
12111111111111111819126ADP-ribosylation factor family
25262526262725252225252Eukaryotic aspartyl protease
66676766181583Cyclic nucleotide-binding domain
111111111211Cytochrome c
111111112212Double-stranded RNA binding motif
2222222230349EF hand
3254Fe-4S binding domain
111111219Fibronectin type III domain
444444445441Globin
21202121222119192321208Glutathione S-transferase, C-terminal domain
111111111413Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
55555555221173Homeodomain
787696993614111lactate/malate dehydrogenase, NAD binding domain
11Low-density lipoprotein receptor repeat class B
444444448848Myosin head (motor domain)
1671791671651681691691592091941,746Cytochrome P450
1591791571711711731741763053472,012Protein kinase domain
19191920201819203726217Pyridine nucleotide-disulphide oxidoreductase
30353033323322324958354Ras family
23292327282725274152302Response regulator receiver domain
223525325130RNase H
5253525355535555118120666RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
213Reverse transcriptase (RNA-dependent DNA polymerase)
444444443439Copper/zinc superoxide dismutase (SODC)
222222223322Iron/manganese superoxide dismutases, alpha-hairpin domain
41393939394040393956411Subtilase family
2031972032032052042032022252242,069Sugar (and other) transporter
19191918191819191920189Thioredoxin
333333335332Trypsin
91491311101210910107Tubulin/FtsZ family, GTPase domain
1111112220131von Willebrand factor type A domain
384839464646474820567630Zinc finger, C2H2 type
46454545879133Zinc finger, C3HC4 type (RING finger)
23232334251461Zinc knuckle
222222224424Protein-tyrosine phosphatase
2252392252462422452382362762212,393short chain dehydrogenase
1251301241301291291281271601311,313Zinc-binding dehydrogenase
109109109109121199Thiolase, N-terminal domain
16161615161515132117160Beta-ketoacyl synthase, N-terminal domain
5565555586552Fe-2S iron-sulfur cluster binding domain
111111116620Enolase, C-terminal TIM barrel domain
11111111111111112225135Glutamine amidotransferase class-I
10101010101010101514109TCP-1/cpn60 chaperonin family
555555558755Glutamine synthetase, catalytic domain
111111112212Triosephosphate isomerase
34353434353435364654377E1-E2 ATPase
8888789981083Core histone H2A/H2B/H3/H4
11111111101110101416115Alpha amylase, catalytic domain
121212213318Phorbol esters/diacylglycerol binding domain (C1 domain)
88878878151289Bacterial transferase hexapeptide (six repeats)
5555555581058tRNA synthetases class I (I, L, M and V)
10161014121613102722150Cyclin, N-terminal domain
42394040413942445843428Carboxylesterase family
444444446644DNA polymerase family B
555555555651ATP synthase subunit C
6666666612868Peroxidase
22252224232424232424235Beta-lactamase
333333222226C-5 cytosine-specific DNA methylase
27252728282729296146327Calcineurin-like phosphoesterase
20202020202020201522197Cellulase (glycosyl hydrolase family 5)
77777777131281tRNA synthetases class II (D, K and N)
495548535553555410097619Mitochondrial carrier protein
111111129recA bacterial DNA recombination protein
36383536363636364448381Aminotransferase class I and II
5656666515969Phosphoribosyl transferase domain
10101010101010101617113Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
111111112111Phosphoglycerate kinase
222222222220Ribosomal protein S4/S9 N-terminal domain
222222222220Ribosomal protein S12/S23
111111111110Bacterial regulatory helix-turn-helix proteins, AraC family
111111111110Chaperonin 10 Kd subunit
12141313131313123025158C2 domain
888888883831133PH domain
57645359555951465047541bZIP transcription factor
65606659626059606259612Aldehyde dehydrogenase family
6286355276356466366356388257676,572Fungal Zn(2)-Cys(6) binuclear cluster domain
36403636383639384547391Cytochrome b5-like Heme/Steroid binding domain
78788888141389Oxidoreductase molybdopterin binding domain
30282928292929295038319Oxidoreductase NAD-binding domain
31333133313332325150357SNF2 family N-terminal domain
222222223322Ribosomal protein S7p/S5e
21212122212321214237250Ubiquitin-conjugating enzyme
11101111111111111921127Isocitrate/isopropylmalate dehydrogenase
222222223423Ribosomal Proteins L2, RNA binding domain
111111113314Hsp90 protein
222222223322Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
111111111110Dihydrofolate reductase
89710911979483Chitin recognition protein
5545555517763Cysteine-rich secretory protein family
111111111110Ribosomal protein S3, C-terminal domain
888888887980Cupin
222222223322Annexin
333333334331Eukaryotic-type carbonic anhydrase
111111112212Chalcone and stilbene synthases, N-terminal domain
5555555557522-oxoacid dehydrogenases acyltransferase (catalytic domain)
812811121111117798Catalase
222222221219Disintegrin
1715141514151515514139UDP-glucoronosyl and UDP-glucosyl transferase
17171717171717171921176Aminotransferase class-III
222222224525Ribosomal protein S19
111111112212DNA gyrase B
18171817171716152117173Thiamine pyrophosphate enzyme, central domain
89888889141393Lyase
222222226628Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
333333336333Sodium:neurotransmitter symporter family
11111218Ferritin-like domain
111111111514Adenylate and Guanylate cyclase catalytic domain
37352541131ATP synthase delta (OSCP) subunit
111111111110Orotidine 5'-phosphate decarboxylase / HUMPS family
111111111110Indole-3-glycerol phosphate synthase
434333322229Aromatic amino acid lyase
111111113314Pyruvate kinase, barrel domain
10111110101010101818118Kinesin motor domain
28312730293030304436315DnaJ domain
14141414141414142220154Proteasome subunit
6668686611871Major intrinsic protein
111111113314ATP synthase
666676666560Glycosyl hydrolase family 1
1111111155183'5'-cyclic nucleotide phosphodiesterase
111111111110Profilin
222222221320Ribosomal protein L22p/L17e
222222222220Ribosomal protein L14p/L23e
10101010810982213110Ubiquitin family
8888888851079Cofilin/tropomyosin-type actin-binding protein
484666666136514-3-3 protein
222222226325Alkaline phosphatase
9999999991192Zinc carboxypeptidase
47484747464746474846469Aldo/keto reductase family
8118910910122314114Myb-like DNA-binding domain
4444446610955Forkhead domain
1281212121214141612124Glycosyl hydrolases family 32 N-terminal domain
222222221421Ribosomal protein L16p/L10e
222222222220Ribosomal protein S14p/S29e
333333334331FKBP-type peptidyl-prolyl cis-trans isomerase
111111111110Glutathione peroxidase
22
13131313141413132622154Flavodoxin
11Protamine P1
111111111110Calreticulin family
15171417151716151519160Common central domain of tyrosinase
10111011111111111213111Aminotransferase class-V
111111112212Ribonucleotide reductase, small chain
53525152505248486864538DEAD/DEAH box helicase
9088878683878283129115930Helicase conserved C-terminal domain
111111111110EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
222222223322Ribosomal protein L23
222222224222Pyridoxal-dependent decarboxylase, C-terminal sheet domain
111111112111Ribosomal protein L5
13141313141413131518140Pyridoxal-dependent decarboxylase conserved domain
444444443439Citrate synthase, C-terminal domain
5555555591160GHMP kinases N terminal domain
887777779875Biotin carboxylase, N-terminal domain
111111111110Tryptophan synthase alpha chain
20212120202020202123206Pyridoxal-phosphate dependent enzyme
16161616161616162618172NUDIX domain
77877888151186pfkB family carbohydrate kinase
11111111111111111514117Glycosyl hydrolases family 28
444444441538Luciferase-like monooxygenase
322222225527Ribosomal protein L3
222222222220Ribosomal protein L11, RNA binding domain
19211821202120203835233Histidine phosphatase superfamily (branch 1)
111121113214Thymidylate synthase
232333332226Lipoxygenase
131813161515191777140ATP synthase alpha/beta chain, C terminal domain
545455546649Calponin homology (CH) domain
3233332310537Glutamine amidotransferases class-II
222222222220Ribosomal protein S15
222322221119Thaumatin family
222222223322Fructose-1-6-bisphosphatase, N-terminal domain
111111111211Ribonucleotide reductase, all-alpha domain
222222222220Ribosomal protein S2
333342336232SRF-type transcription factor (DNA-binding and dimerisation domain)
13151416121711112623158GATA zinc finger
464846454645464612460552Amino acid permease
9999999981292Prolyl oligopeptidase family
222222222220Ribosomal protein L30p/L7e
11151114131413132321148Histidine phosphatase superfamily (branch 2)
111111111110Respiratory-chain NADH dehydrogenase, 30 Kd subunit
666666669966Aconitase family (aconitate hydratase)
757555555554Glycosyl hydrolase family 10
333333335433Glycosyl hydrolases family 17
222222222220Ribosomal protein S5, N-terminal domain
111111111110Nucleoside diphosphate kinase
1111111119Tetraspanin family
222222221219Ribosomal protein S10p/S20e
8877775613876Arrestin (or S-antigen), N-terminal domain
111111112212Phosphoglucose isomerase
111111112212Carbohydrate phosphorylase
111111112212SecY translocase
111111111110Respiratory-chain NADH dehydrogenase, 49 Kd subunit
222222222321Ribosomal protein L6
333333336939Polyprenyl synthetase
77776766152391Hexokinase
18201819191919191335199Dynamin family
111111111110Transcription factor TFIID (or TATA-binding protein, TBP)
12121212121112121511121Rieske [2Fe-2S] domain
11111111210Phytochrome region
11121111111111111314116Biotin-requiring enzyme
111111112212Phosphofructokinase
222222222220Ribosomal protein S17
2627611528352Hydroxymethylglutaryl-coenzyme A reductase
44454444121661FGGY family of carbohydrate kinases, N-terminal domain
111111111110Sodium:dicarboxylate symporter family
21242125232423232327234Enoyl-CoA hydratase/isomerase
222222222220Ribosomal protein S9/S16
222222222220Transcription factor TFIIB repeat
8888888891184Cytidine and deoxycytidylate deaminase zinc-binding region
222222221219Molybdopterin oxidoreductase
12191214181118134626189Chromo (CHRromatin Organisation MOdifier) domain
810899977131090Phosphatidylinositol-specific phospholipase C, Y domain
101210111111991613112Phosphatidylinositol-specific phospholipase C, X domain
16181617181718183118187D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
222222222624Malic enzyme, N-terminal domain
1312323311130PEP-utilising enzyme, mobile domain
3434445544406-phosphogluconate dehydrogenase, C-terminal domain
18191821192018182922202Multicopper oxidase
11121111111111111215116WW domain
222222221219Ribosomal RNA adenine dimethylase
11Yeast PIR protein repeat
1211201201251221251221192001861,360WD domain, G-beta repeat
89899899922100Heavy-metal-associated domain
343333334433Adenylate kinase
222222222321Phosphoglucomutase/phosphomannomutase, C-terminal domain
222222222321Ribosomal protein S8
222222222321Ribosomal protein S11
555555555651LIM domain
43111111215Matrixin
222222224222Regulator of chromosome condensation (RCC1) repeat
222222222220Ribosomal protein S13/S18
333333334432chorismate binding enzyme
33333333443260s Acidic ribosomal protein
444444446644Prenyltransferase and squalene oxidase repeat
33333223111043Protein kinase C terminal domain
111111111110Single-strand binding protein family
111111112212S-adenosylmethionine synthetase, N-terminal domain
109910101010101514107Bromodomain
18181819191919192016185Acyl-CoA dehydrogenase, C-terminal domain
13131314131313134232179Ubiquitin carboxyl-terminal hydrolase
111111111110Ribosomal protein L36
333333333330Ribonuclease T2 family
36354544141462HSF-type DNA-binding
222222222220SRP54-type protein, GTPase domain
222222226628Urease alpha-subunit, N-terminal domain
12121212121212121311120Serine carboxypeptidase
10111010910881725118Phosphatidylinositol 3- and 4-kinase
54545455101158Transketolase, thiamine diphosphate binding domain
333333334331Glycosyl hydrolases family 11
555555555550Inositol monophosphatase family
444444447746Glutaredoxin
222222226224Isocitrate lyase family
433333334433Serine hydroxymethyltransferase
121412111410131368113Iron-containing alcohol dehydrogenase
222222223322Ribosomal protein L10
222222222220KOW motif
11111111210Ribosomal protein L34
111115Ribosomal protein L33
333333336434RF-1 domain
4444444441450Sodium:solute symporter family
111111111110Imidazoleglycerol-phosphate dehydratase
111111111110DNA polymerase family A
111111112212IMP dehydrogenase / GMP reductase domain
111111115518Glucose-6-phosphate dehydrogenase, NAD binding domain
66666666132081Protein phosphatase 2C
222222225425Nucleotidyl transferase
656656559558Carbonic anhydrase
111111111211Phosphoribulokinase / Uridine kinase family
13151313111312121515132Fatty acid desaturase
666666666761MutS domain V
111111111110Delta-aminolevulinic acid dehydratase
7877777791076Arginase family
81189791086682MCM P-loop domain
333333334432Squalene/phytoene synthase
111111111110Bacterial extracellular solute-binding proteins, family 5 Middle
10101010101010101923122FHA domain
84898484868583819494864AMP-binding enzyme
6666666661266G-protein alpha subunit
10151016111211101563173HMG (high mobility group) box
11E2 (early) protein, N terminal
19241921212120203745247His Kinase A (phospho-acceptor) domain
222222227730Armadillo/beta-catenin-like repeat
18151616171516184726204Tetratricopeptide repeat
444444345541Ion transport protein
111111112212DNA gyrase/topoisomerase IV, subunit A
7776777721985BRCA1 C Terminus (BRCT) domain
12101210121112121714122Glycosyl transferases group 1
2222222213332Glycosyl transferase family 2
2112122029SAM domain (Sterile alpha motif)
111111115518linker histone H1 and H5 family
111111111110Ribosomal protein L7/L12 C-terminal domain
1111111111111111912109Pectate lyase
333333333330ribonuclease
222222226628Urease, gamma subunit
999999992117110CoA-ligase
37373637413637362542364Phosphopantetheine attachment site
444444444440Formyl transferase
13141314131413132225154Metallopeptidase family M24
33433333311066Leucine Rich Repeat
15151515141514149120228alpha/beta hydrolase fold
333333333330RNA polymerase Rpb2, domain 6
44444444101153PB1 domain
222222222220Staphylococcal nuclease homologue
12121212121212121916131Rab-GTPase-TBC domain
111111111110Tudor domain
111111113314WH1 domain
4544444410952Zinc finger, ZZ type
242123223425HRDC domain
13101211111111111810118CBS domain
222222222220Ribosomal protein L13
222222223322Ribosomal protein L4/L1 family
111111113314Clp protease
344434448947S1 RNA binding domain
111111112212HIUase/Transthyretin family
353556567651AhpC/TSA family
656555556553tRNA synthetases class I (W and Y)
121112111213UvrD/REP helicase N-terminal domain
17171717171617171719171Rhodanese-like domain
222222227730Universal stress protein family
45474548494748489563535Acetyltransferase (GNAT) family
111111111110SecE/Sec61-gamma subunits of protein translocation complex
111111112313C-terminal regulatory domain of Threonine dehydratase
222222222321AIR synthase related protein, N-terminal domain
98998988171499tRNA synthetase class II core domain (G, H, P, S and T)
111111111110SpoU rRNA Methylase family
222222222220Tetrapyrrole (Corrin/Porphyrin) Methylases
111111111110Glycosyl transferase family, a/b domain
22PDZ domain
85877777101076Class II Aldolase and Adducin N-terminal domain
98967677171288Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
554544546749Fes/CIP4, and EFC/F-BAR homology domain
222222226325IQ calmodulin-binding motif
222222228832Phosphoinositide 3-kinase family, accessory domain (PIK domain)
333333336434Phospholipase D Active site motif
20212015181516151216168Regulator of G protein signaling domain
444464448850GTPase-activator protein for Ras-like GTPase
44444444151663RasGEF domain
44444444151663RasGEF N-terminal motif
77878788151489RhoGAP domain
67676766121275RhoGEF domain
444555556952SPRY domain
3333333341240RNA polymerase Rpb1, domain 2
333333335534Guanylate kinase
444444446745Gelsolin repeat
4444444411851UBA/TS-N domain
14131313131313133030165PHD-finger
111111111211GGL domain
6666666691269HECT-domain (ubiquitin-transferase)