PFAM Domains • Lentinula raphanica TFB9207 v1.0
Annotations/GenomesLenafn1Lenafn_TMI1502_1Lened_B_1_1Lenedo1Lenlat1Lennov1Lenra_T_1Lenrap1Lenrap1_155LraINPA1820_1LraJLM1587_1LraTFB9207_1TotalAnnotation Description
PFAMs
10,2109,6699,08310,2079,8989,65310,10910,41010,10410,31410,08210,172119,911
2211177 transmembrane receptor (Secretin family)
434143454141393840414040492ATPase family associated with various cellular activities (AAA)
464257494443444444414343540ABC transporter
44365454444451ATP synthase alpha/beta family, nucleotide-binding domain
151617151515151717161516189Elongation factor Tu GTP binding domain
141310131213121412121413152Helix-loop-helix DNA-binding domain
987988999989102Hsp20/alpha crystallin family
11917610119881078114Hsp70 protein
77877777877786KH domain
191713211718161718171516204SH3 domain
141214141212111413121111150Actin
5811131012151427451917196Ankyrin repeat
888888999999102ADP-ribosylation factor family
333235293130282928292728359Eukaryotic aspartyl protease
33333333333336Cyclic nucleotide-binding domain
1111111111111Cytochrome c
884998119811910104Double-stranded RNA binding motif
11211121112115EF hand
988910766576788Glutathione S-transferase, C-terminal domain
11111111111112Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
139715119888888112Homeodomain
22222221222223lactate/malate dehydrogenase, NAD binding domain
67776656657674Myosin head (motor domain)
1281291391281331291411431351411421411,629Cytochrome P450
2011991782032011891982112062021952032,386Protein kinase domain
131414131414141414141414166Pyridine nucleotide-disulphide oxidoreductase
262626262526282727272627317Ras family
111079911121110111011122Response regulator receiver domain
20291152215203033172325250RNase H
666158686564676864666968784RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
11Reverse transcriptase (RNA-dependent DNA polymerase)
22222222222224Iron/manganese superoxide dismutases, alpha-hairpin domain
13129111211131514141514153Subtilase family
494852474948474747484747576Sugar (and other) transporter
111112101110111010121111130Thioredoxin
65655465755766Tubulin/FtsZ family, GTPase domain
111121119von Willebrand factor type A domain
332617303024313126313233344Zinc finger, C2H2 type
20161116181310128888148Zinc finger, C3HC4 type (RING finger)
129118714151316201316154Zinc knuckle
32222222222326Protein-tyrosine phosphatase
9676859085818986798280821,011short chain dehydrogenase
524842515351505049505152599Zinc-binding dehydrogenase
55655555555561Thiolase, N-terminal domain
67595548675572Beta-ketoacyl synthase, N-terminal domain
111211111111132Fe-2S iron-sulfur cluster binding domain
11111111111112Enolase, C-terminal TIM barrel domain
999888888988100Glutamine amidotransferase class-I
111019101011101012101111135TCP-1/cpn60 chaperonin family
33333333333336Glutamine synthetase, catalytic domain
11111111211113Triosephosphate isomerase
171515161515141816151415185E1-E2 ATPase
161816171719181818181818211Core histone H2A/H2B/H3/H4
121211121212131111111111139Alpha amylase, catalytic domain
65465555554560Phorbol esters/diacylglycerol binding domain (C1 domain)
54555465554558Bacterial transferase hexapeptide (six repeats)
44644644444452tRNA synthetases class I (I, L, M and V)
161711161615141415151414177Cyclin, N-terminal domain
201923232019272927272726287Carboxylesterase family
54756444554457DNA polymerase family B
43333233233335ATP synthase subunit C
11101011111010101010109122Peroxidase
33333322222230Beta-lactamase
44444444444448C-5 cytosine-specific DNA methylase
232421252525232322232423281Calcineurin-like phosphoesterase
222120212221202020202020247Cellulase (glycosyl hydrolase family 5)
85776577666676tRNA synthetases class II (D, K and N)
383737383738373737373838449Mitochondrial carrier protein
111115recA bacterial DNA recombination protein
151514161615181817181817197Aminotransferase class I and II
43444434433444Phosphoribosyl transferase domain
151516151515151516161515183Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11111111111112Phosphoglycerate kinase
22222222222224Ribosomal protein S4/S9 N-terminal domain
22222222222224Ribosomal protein S12/S23
11111111111112Chaperonin 10 Kd subunit
161512151515161415161415178C2 domain
1096891077777693PH domain
161714151516151516161616187bZIP transcription factor
191823212018191918192219235Aldehyde dehydrogenase family
724764827752817561817881851Fungal Zn(2)-Cys(6) binuclear cluster domain
242319262323242526262726292Cytochrome b5-like Heme/Steroid binding domain
22232222222225Oxidoreductase molybdopterin binding domain
88598898899897Oxidoreductase NAD-binding domain
282726332826282525262924325SNF2 family N-terminal domain
22222232323328Ribosomal protein S7p/S5e
222222222222212422212122263Ubiquitin-conjugating enzyme
66856666666673Isocitrate/isopropylmalate dehydrogenase
22122222222223Ribosomal Proteins L2, RNA binding domain
32223223243331Hsp90 protein
22222222222224Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111111111112Dihydrofolate reductase
33233333333335Cysteine-rich secretory protein family
11111111211113Ribosomal protein S3, C-terminal domain
1111122111113Cupin
22233222222226Annexin
334333434434412-oxoacid dehydrogenases acyltransferase (catalytic domain)
21111122222219Catalase
1111111111111Disintegrin
768776101011111010103UDP-glucoronosyl and UDP-glucosyl transferase
55555555556561Aminotransferase class-III
22122222222223Ribosomal protein S19
11111111111112DNA gyrase B
23233344434439Thiamine pyrophosphate enzyme, central domain
44544454444450Lyase
22222222222224Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
11111111111112Adenylate and Guanylate cyclase catalytic domain
11111111111112ATP synthase delta (OSCP) subunit
11111111111112Orotidine 5'-phosphate decarboxylase / HUMPS family
22222222222224Indole-3-glycerol phosphate synthase
22222222222224Aromatic amino acid lyase
11111111111112Pyruvate kinase, barrel domain
131212121212109991011131Kinesin motor domain
343228333230313130292830368DnaJ domain
151515161515141415161414178Proteasome subunit
22133244444437Major intrinsic protein
11111111111112ATP synthase
33323333333335Glycosyl hydrolase family 1
111111111111123'5'-cyclic nucleotide phosphodiesterase
11111111111112Profilin
22222222222224Ribosomal protein L22p/L17e
22222222222224Ribosomal protein L14p/L23e
171713171617172021181415202Ubiquitin family
55555555555560Cofilin/tropomyosin-type actin-binding protein
2222225553223414-3-3 protein
444343434543474545474647538Aldo/keto reductase family
10979991099101111113Myb-like DNA-binding domain
76765768677678Forkhead domain
22222222222224Ribosomal protein L16p/L10e
22122222222223Ribosomal protein S14p/S29e
33333333333336FKBP-type peptidyl-prolyl cis-trans isomerase
11111111111112Glutathione peroxidase
11Dehydrin
55365576855767Flavodoxin
11111121121114Calreticulin family
44444422222236Common central domain of tyrosinase
101111101010101010101010122Aminotransferase class-V
32432246333338Ribonucleotide reductase, small chain
615748635755657472806668766DEAD/DEAH box helicase
9487819286869410098106100961,120Helicase conserved C-terminal domain
1111111111111Fructose-bisphosphate aldolase class-I
11111111121214EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22122222222223Ribosomal protein L23
11111111111112Pyridoxal-dependent decarboxylase, C-terminal sheet domain
11111115221118Ribosomal protein L5
55675555567667Pyridoxal-dependent decarboxylase conserved domain
44744444444451Citrate synthase, C-terminal domain
55455555555559GHMP kinases N terminal domain
66566666766773Biotin carboxylase, N-terminal domain
11111111111112Tryptophan synthase alpha chain
9912999888888105Pyridoxal-phosphate dependent enzyme
17149161716151715151516182NUDIX domain
65566666666670pfkB family carbohydrate kinase
161312131515121111111111151Glycosyl hydrolases family 28
22212222222223Ribosomal protein L3
22122223222224Ribosomal protein L11, RNA binding domain
111212121211111212121212141Histidine phosphatase superfamily (branch 1)
21111111111113Thymidylate synthase
11111111111112Lipoxygenase
44255444444448ATP synthase alpha/beta chain, C terminal domain
44444454555553Calponin homology (CH) domain
33333333333336Glutamine amidotransferases class-II
22222222222224Ribosomal protein S15
43454433333342Thaumatin family
11111111111112Fructose-1-6-bisphosphatase, N-terminal domain
41231121116Ribonucleotide reductase, all-alpha domain
22222222222224Ribosomal protein S2
33333333343337SRF-type transcription factor (DNA-binding and dimerisation domain)
181616151313121113121314166GATA zinc finger
879777710888894Amino acid permease
89888878999899Prolyl oligopeptidase family
22122233333329Ribosomal protein L30p/L7e
10911111010101010111010122Histidine phosphatase superfamily (branch 2)
11111111111112Respiratory-chain NADH dehydrogenase, 30 Kd subunit
74644444444453Aconitase family (aconitate hydratase)
33433333333337Glycosyl hydrolase family 10
44333444332340Glycosyl hydrolases family 17
22222222222224Ribosomal protein S5, N-terminal domain
2222222222222Nucleoside diphosphate kinase
44244443333341Tetraspanin family
22222212222223Ribosomal protein S10p/S20e
12112134333327Arrestin (or S-antigen), N-terminal domain
11111111111112Phosphoglucose isomerase
11111111111112Carbohydrate phosphorylase
11211111111113SecY translocase
11211111111113Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222222232225Ribosomal protein L6
66876677777781Polyprenyl synthetase
22222222222224Hexokinase
1010101299999999114Dynamin family
11111111111112Transcription factor TFIID (or TATA-binding protein, TBP)
33333332333335Rieske [2Fe-2S] domain
111112111111Phytochrome region
895989810887897Biotin-requiring enzyme
11111111111112Phosphofructokinase
2222222112119Ribosomal protein S17
11121111111113Hydroxymethylglutaryl-coenzyme A reductase
44444444444448FGGY family of carbohydrate kinases, N-terminal domain
1198101010999999112Enoyl-CoA hydratase/isomerase
22222222222224Ribosomal protein S9/S16
32222232223328Transcription factor TFIIB repeat
66666666666672Cytidine and deoxycytidylate deaminase zinc-binding region
11111111111112Molybdopterin oxidoreductase
87797987101099100Chromo (CHRromatin Organisation MOdifier) domain
33333333333336Phosphatidylinositol-specific phospholipase C, Y domain
77566677777779Phosphatidylinositol-specific phospholipase C, X domain
88798888888896D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
33333333333336Malic enzyme, N-terminal domain
111111111111126-phosphogluconate dehydrogenase, C-terminal domain
141413141414151515151516174Multicopper oxidase
88988888788896WW domain
22222222222224Ribosomal RNA adenine dimethylase
1431261211441231261431321381381291271,590WD domain, G-beta repeat
44354434333343Heavy-metal-associated domain
43234333333337Adenylate kinase
22222233333330Phosphoglucomutase/phosphomannomutase, C-terminal domain
22222212222223Ribosomal protein S8
43333322222231Ribosomal protein S11
65466577667671LIM domain
66666666666773Regulator of chromosome condensation (RCC1) repeat
22232222221224Ribosomal protein S13/S18
22222222222224chorismate binding enzyme
4333443343334060s Acidic ribosomal protein
33444223333236Prenyltransferase and squalene oxidase repeat
55455566666665Protein kinase C terminal domain
11111111111112Single-strand binding protein family
11111111111112S-adenosylmethionine synthetase, N-terminal domain
111110111111141513131214146Bromodomain
77777778877786Acyl-CoA dehydrogenase, C-terminal domain
141415161414151614151514176Ubiquitin carboxyl-terminal hydrolase
111111111110Ribosomal protein L36
22222222222224Ribonuclease T2 family
44444444444448HSF-type DNA-binding
23222222222225SRP54-type protein, GTPase domain
11111111121113Urease alpha-subunit, N-terminal domain
151116131212131112131212152Serine carboxypeptidase
8811988888888100Phosphatidylinositol 3- and 4-kinase
22222222222224Transketolase, thiamine diphosphate binding domain
22222222222224Glycosyl hydrolases family 11
1111116WHEP-TRS domain
33333322222230Inositol monophosphatase family
55555465666664Glutaredoxin
22222222232225Isocitrate lyase family
11311111111114Serine hydroxymethyltransferase
22222222222224Iron-containing alcohol dehydrogenase
22222222322225Ribosomal protein L10
56455655565562KOW motif
11111111111112Ribosomal protein L34
11111111111112Ribosomal protein L33
33233333333335RF-1 domain
33133333233434Sodium:solute symporter family
11111111111112Imidazoleglycerol-phosphate dehydratase
11111111111112DNA polymerase family A
11111111211113IMP dehydrogenase / GMP reductase domain
11111111111112Glucose-6-phosphate dehydrogenase, NAD binding domain
121112121112121313121212144Protein phosphatase 2C
33233333333335Nucleotidyl transferase
55554555455558Carbonic anhydrase
11111111111112Phosphoribulokinase / Uridine kinase family
131312131213111213121213149Fatty acid desaturase
66766666766674MutS domain V
11111111111112Delta-aminolevulinic acid dehydratase
44444444444448Arginase family
66866667676676MCM P-loop domain
22222222232225Squalene/phytoene synthase
10119131512131213131414149FHA domain
414041403838383840403939472AMP-binding enzyme
151416141414161516151516180G-protein alpha subunit
252214242424232122232323268HMG (high mobility group) box
66464667555666His Kinase A (phospho-acceptor) domain
22222234244231Armadillo/beta-catenin-like repeat
171514151915172017192019207Tetratricopeptide repeat
33333237333339Ion transport protein
12211111111114DNA gyrase/topoisomerase IV, subunit A
999128810988710107BRCA1 C Terminus (BRCT) domain
66676666666673Glycosyl transferases group 1
33333333333336Glycosyl transferase family 2
42122222222225SAM domain (Sterile alpha motif)
54344444444448linker histone H1 and H5 family
11111111111112Ribosomal protein L7/L12 C-terminal domain
11111122222218Pectate lyase
22122222222223ribonuclease
11111111111112Urease, gamma subunit
33433344444443CoA-ligase
12138131112131312161314150Phosphopantetheine attachment site
22122222222223Formyl transferase
111111111111121112111211135Metallopeptidase family M24
11111112121114Leucine Rich Repeat
794699891098896alpha/beta hydrolase fold
33434344545446RNA polymerase Rpb2, domain 6
55555656555562PB1 domain
22222222222224Staphylococcal nuclease homologue
121211121212121212121212143Rab-GTPase-TBC domain
11111111111112Tudor domain
11212222222221WH1 domain
33333333333336Zinc finger, ZZ type
11111111111112HRDC domain
86886677757782CBS domain
22222222222224Ribosomal protein L13
322233232