PFAM Domains • Cryptococcus curvatus ATCC 20509 v1.0
Annotations/GenomesCrycu1Cryne_H99_1Cryvi1Diocr1Treme1Trich1Triol1TotalAnnotation Description
PFAMs
6,3095,7325,5639,5565,5656,1756,30945,209
12147 transmembrane receptor (rhodopsin family)
33313457363634261ATPase family associated with various cellular activities (AAA)
36343883343537297ABC transporter
444544429ATP synthase alpha/beta family, nucleotide-binding domain
2114EGF-like domain
1313131913131397Elongation factor Tu GTP binding domain
9981288963Helix-loop-helix DNA-binding domain
788978754Hsp70 protein
8881177857KH domain
1113SH2 domain
22221929222223159SH3 domain
91091999974Actin
19181633151719137Ankyrin repeat
111214PAN domain
8871288859ADP-ribosylation factor family
1989119141888Eukaryotic aspartyl protease
333333321Cyclic nucleotide-binding domain
112Cytochrome b/b6/petB
11111117Cytochrome c
221117Double-stranded RNA binding motif
17161422151616116EF hand
1214111114Fe-4S binding domain
211127Fibronectin type III domain
111115Globin
6841328748Glutathione S-transferase, C-terminal domain
222312214Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
464845435Homeodomain
112Laminin EGF domain
222623219lactate/malate dehydrogenase, NAD binding domain
645775640Myosin head (motor domain)
16516228111694Cytochrome P450
9489104166969595739Protein kinase domain
1511121611131593Pyridine nucleotide-disulphide oxidoreductase
23232331242423171Ras family
131022179131397Response regulator receiver domain
212121211RNase H
55625281595755421RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
1212Reverse transcriptase (RNA-dependent DNA polymerase)
411213416Copper/zinc superoxide dismutase (SODC)
11121219Iron/manganese superoxide dismutases, alpha-hairpin domain
233632221Subtilase family
38622974255239319Sugar (and other) transporter
1088128101066Thioredoxin
444744431Tubulin/FtsZ family, GTPase domain
521614423von Willebrand factor type A domain
27242439282928199Zinc finger, C2H2 type
40323360373841281Zinc finger, C3HC4 type (RING finger)
81192015077212Zinc knuckle
222322215Protein-tyrosine phosphatase
47353885344449332short chain dehydrogenase
36252754173636231Zinc-binding dehydrogenase
834537838Thiolase, N-terminal domain
11121118Beta-ketoacyl synthase, N-terminal domain
4357434302Fe-2S iron-sulfur cluster binding domain
12111118Enolase, C-terminal TIM barrel domain
235Cytochrome C and Quinol oxidase polypeptide I
112Cytochrome C oxidase subunit II, periplasmic domain
7781187755Glutamine amidotransferase class-I
1010101310111074TCP-1/cpn60 chaperonin family
213ATP synthase A chain
222222214Glutamine synthetase, catalytic domain
11111117Triosephosphate isomerase
111011169101178E1-E2 ATPase
12881611111278Core histone H2A/H2B/H3/H4
7992097768Alpha amylase, catalytic domain
433432423Phorbol esters/diacylglycerol binding domain (C1 domain)
5951586654Bacterial transferase hexapeptide (six repeats)
333633324tRNA synthetases class I (I, L, M and V)
9981499967Cyclin, N-terminal domain
114865101155Carboxylesterase family
444644430DNA polymerase family B
353333323ATP synthase subunit C
123Legume lectin domain
322422318Peroxidase
11217281151Beta-lactamase
21227C-5 cytosine-specific DNA methylase
112NADH dehydrogenase
1113Nitrogenase component 1 type Oxidoreductase
18191732182116141Calcineurin-like phosphoesterase
3581164441Cellulase (glycosyl hydrolase family 5)
566956542tRNA synthetases class II (D, K and N)
36343257333936267Mitochondrial carrier protein
16161622162116123Aminotransferase class I and II
7761167751Phosphoribosyl transferase domain
1213121812121291Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11111117Phosphoglycerate kinase
222222214Ribosomal protein S4/S9 N-terminal domain
222322215Ribosomal protein S12/S23
11121118Chaperonin 10 Kd subunit
1412111712111491C2 domain
15161021171416109PH domain
677956646bZIP transcription factor
2014101591819105Aldehyde dehydrogenase family
105775810153100102596Fungal Zn(2)-Cys(6) binuclear cluster domain
23191832172123153Cytochrome b5-like Heme/Steroid binding domain
22Oxidoreductase molybdopterin binding domain
9781059957Oxidoreductase NAD-binding domain
20211935192120155SNF2 family N-terminal domain
222422216Ribosomal protein S7p/S5e
19191628201919140Ubiquitin-conjugating enzyme
6761157648Isocitrate/isopropylmalate dehydrogenase
122322214Ribosomal Proteins L2, RNA binding domain
222422216Hsp90 protein
222322215Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11121118Dihydrofolate reductase
422634526Cysteine-rich secretory protein family
11111117Ribosomal protein S3, C-terminal domain
3238Cupin
11121118Annexin
224Eukaryotic-type carbonic anhydrase
11Chalcone and stilbene synthases, N-terminal domain
3325343232-oxoacid dehydrogenases acyltransferase (catalytic domain)
243312217Catalase
12121119Disintegrin
3811UDP-glucoronosyl and UDP-glucosyl transferase
108510691058Aminotransferase class-III
222422216Ribosomal protein S19
11121118DNA gyrase B
424323422Thiamine pyrophosphate enzyme, central domain
333534324Lyase
222222214Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1214Sodium:neurotransmitter symporter family
11121118Adenylate and Guanylate cyclase catalytic domain
11121118ATP synthase delta (OSCP) subunit
11111117Orotidine 5'-phosphate decarboxylase / HUMPS family
11121118Indole-3-glycerol phosphate synthase
112Aromatic amino acid lyase
11111117Pyruvate kinase, barrel domain
910913129971Kinesin motor domain
23232435252623179DnaJ domain
14141419141414103Proteasome subunit
312714321Major intrinsic protein
11121118ATP synthase
22312212Glycosyl hydrolase family 1
11111163'5'-cyclic nucleotide phosphodiesterase
11Protease inhibitor/seed storage/LTP family
11111117Profilin
11211219Ribosomal protein L22p/L17e
222322215Ribosomal protein L14p/L23e
101211171091079Ubiquitin family
555855538Cofilin/tropomyosin-type actin-binding protein
1112111814-3-3 protein
123118Alkaline phosphatase
11111117Zinc carboxypeptidase
20212548232020177Aldo/keto reductase family
11751211121169Myb-like DNA-binding domain
563745434Forkhead domain
2112129Glycosyl hydrolases family 32 N-terminal domain
11111117Ribosomal protein L16p/L10e
222522217Ribosomal protein S14p/S29e
333733325FKBP-type peptidyl-prolyl cis-trans isomerase
222322215Glutathione peroxidase
11121118
11Dehydrin
754446737Flavodoxin
112Tropomyosin
11121118Calreticulin family
457846438Aminotransferase class-V
221322214Ribonucleotide reductase, small chain
38414062373638292DEAD/DEAH box helicase
667166109656566508Helicase conserved C-terminal domain
11121118EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
221422215Ribosomal protein L23
311211312Pyridoxal-dependent decarboxylase, C-terminal sheet domain
121222111Ribosomal protein L5
434854432Pyridoxal-dependent decarboxylase conserved domain
11111117Citrate synthase, C-terminal domain
554845435GHMP kinases N terminal domain
765657743Biotin carboxylase, N-terminal domain
11111117Tryptophan synthase alpha chain
1189116101166Pyridoxal-phosphate dependent enzyme
149122210131494NUDIX domain
6631147643pfkB family carbohydrate kinase
11561115Glycosyl hydrolases family 28
33Luciferase-like monooxygenase
222322215Ribosomal protein L3
222422216Ribosomal protein L11, RNA binding domain
1097249121081Histidine phosphatase superfamily (branch 1)
11111117Thymidylate synthase
444544429ATP synthase alpha/beta chain, C terminal domain
434544428Calponin homology (CH) domain
345945434Glutamine amidotransferases class-II
222322215Ribosomal protein S15
223310Thaumatin family
11121118Fructose-1-6-bisphosphatase, N-terminal domain
11111117Ribonucleotide reductase, all-alpha domain
222322215Ribosomal protein S2
222322215SRF-type transcription factor (DNA-binding and dimerisation domain)
1112916910976GATA zinc finger
351691753036148Amino acid permease
243422219Prolyl oligopeptidase family
111322111Ribosomal protein L30p/L7e
554754535Histidine phosphatase superfamily (branch 2)
11111117Respiratory-chain NADH dehydrogenase, 30 Kd subunit
455544431Aconitase family (aconitate hydratase)
112Glycosyl hydrolase family 10
11114Glycosyl hydrolases family 17
222212213Ribosomal protein S5, N-terminal domain
221312213Nucleoside diphosphate kinase
111115Tetraspanin family
12121119Ribosomal protein S10p/S20e
222321214Arrestin (or S-antigen), N-terminal domain
11121219Phosphoglucose isomerase
11121118Carbohydrate phosphorylase
11211118SecY translocase
11121118Respiratory-chain NADH dehydrogenase, 49 Kd subunit
222222214Ribosomal protein L6
333533323Polyprenyl synthetase
222322215Hexokinase
333933327Dynamin family
11121118Transcription factor TFIID (or TATA-binding protein, TBP)
334543325Rieske [2Fe-2S] domain
22Bacterial regulatory proteins, lacI family
1111116Phytochrome region
426Proton-conducting membrane transporter
9861069957Biotin-requiring enzyme
11121219Phosphofructokinase
222322215Ribosomal protein S17
11111117Hydroxymethylglutaryl-coenzyme A reductase
433524425FGGY family of carbohydrate kinases, N-terminal domain
22Sodium:dicarboxylate symporter family
1454104121463Enoyl-CoA hydratase/isomerase
222322215Ribosomal protein S9/S16
222312214Transcription factor TFIIB repeat
8104546845Cytidine and deoxycytidylate deaminase zinc-binding region
11221119Molybdopterin oxidoreductase
5838276562Chromo (CHRromatin Organisation MOdifier) domain
211211210Phosphatidylinositol-specific phospholipase C, Y domain
421412418Phosphatidylinositol-specific phospholipase C, X domain
7961099757D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
232422217Malic enzyme, N-terminal domain
111221196-phosphogluconate dehydrogenase, C-terminal domain
552144526Multicopper oxidase
87614810861WW domain
112212110Ribosomal RNA adenine dimethylase
1021029815897102102761WD domain, G-beta repeat
314634324Heavy-metal-associated domain
333533323Adenylate kinase
212322214Phosphoglucomutase/phosphomannomutase, C-terminal domain
11211118Ribosomal protein S8
11111117Ribosomal protein S11
544844433LIM domain
211126215Regulator of chromosome condensation (RCC1) repeat
222222214Ribosomal protein S13/S18
22NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
223422217chorismate binding enzyme
33333232060s Acidic ribosomal protein
445744432Prenyltransferase and squalene oxidase repeat
544943433Protein kinase C terminal domain
211312212Single-strand binding protein family
11111117S-adenosylmethionine synthetase, N-terminal domain
10109169111176Bromodomain
177577111771Acyl-CoA dehydrogenase, C-terminal domain
14141424181414112Ubiquitin carboxyl-terminal hydrolase
11121118Ribosomal protein L36
123Ribonuclease T2 family
11Gonadotropin-releasing hormone
345956537HSF-type DNA-binding
222422216SRP54-type protein, GTPase domain
11111117Urease alpha-subunit, N-terminal domain
373632327Serine carboxypeptidase
7881287757Phosphatidylinositol 3- and 4-kinase
152522118Transketolase, thiamine diphosphate binding domain
333824326Inositol monophosphatase family
444644430Glutaredoxin
211213212Isocitrate lyase family
11121118Serine hydroxymethyltransferase
21111129Iron-containing alcohol dehydrogenase
222222214Ribosomal protein L10
544654533KOW motif
1121117Ribosomal protein L34
11114Ribosomal protein L33
332533322RF-1 domain
1112117Sodium:solute symporter family
11111117Imidazoleglycerol-phosphate dehydratase
11111117DNA polymerase family A
11111117IMP dehydrogenase / GMP reductase domain
11311119Glucose-6-phosphate dehydrogenase, NAD binding domain
5561255543Protein phosphatase 2C
222422216Nucleotidyl transferase
521524524Carbonic anhydrase
11112118Phosphoribulokinase / Uridine kinase family
545656536Fatty acid desaturase
6661167749MutS domain V
11121118Delta-aminolevulinic acid dehydratase
331113214Arginase family
666966645MCM P-loop domain
112321111Squalene/phytoene synthase
7751078751FHA domain
213NADH-ubiquinone/plastoquinone oxidoreductase chain 6
339141682533138AMP-binding enzyme
333533323G-protein alpha subunit
677866646HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
1113Cytochrome c oxidase subunit III
10715147101073His Kinase A (phospho-acceptor) domain
224422218Armadillo/beta-catenin-like repeat
19222125162219144Tetratricopeptide repeat
433833428Ion transport protein
11121118DNA gyrase/topoisomerase IV, subunit A
771115108765BRCA1 C Terminus (BRCT) domain
6771177651Glycosyl transferases group 1
223422217Glycosyl transferase family 2
1113SAM domain (Sterile alpha motif)
12121119linker histone H1 and H5 family
11111117Ribosomal protein L7/L12 C-terminal domain
11ribonuclease
11111117Urease, gamma subunit
433734428CoA-ligase
224823223Phosphopantetheine attachment site
332534323Formyl transferase
111010139111175Metallopeptidase family M24
16171427192016129Leucine Rich Repeat
2091023122121116alpha/beta hydrolase fold
334433323RNA polymerase Rpb2, domain 6
333633324PB1 domain
222322215Staphylococcal nuclease homologue
1099188101074Rab-GTPase-TBC domain
11121118Tudor domain
11111117WH1 domain
434444326Zinc finger, ZZ type
221422114HRDC domain
8751178854CBS domain
222322215Ribosomal protein L13
222222214Ribosomal protein L4/L1 family
11111117Clp protease
433744429S1 RNA binding domain
1111217HIUase/Transthyretin family
333544325AhpC/TSA family
434544428tRNA synthetases class I (W and Y)
11121118UvrD/REP helicase N-terminal domain
543834532Rhodanese-like domain
222322215Universal stress protein family
39182058173839229Acetyltransferase (GNAT) family
11111117SecE/Sec61-gamma subunits of protein translocation complex
11111117C-terminal regulatory domain of Threonine dehydratase
222422216AIR synthase related protein, N-terminal domain
666866644tRNA synthetase class II core domain (G, H, P, S and T)
123Phage integrase family
222422216Tetrapyrrole (Corrin/Porphyrin) Methylases
11111117Glycosyl transferase family, a/b domain
621413623Class II Aldolase and Adducin N-terminal domain
212323215Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
352643326Fes/CIP4, and EFC/F-BAR homology domain
672333630IQ calmodulin-binding motif
222322215Phosphoinositide 3-kinase family, accessory domain (PIK domain)
443645430Phospholipase D Active site motif
11111117Regulator of G protein signaling domain
433344425GTPase-activator protein for Ras-like GTPase
333533323RasGEF domain
333333321RasGEF N-terminal motif
10981811101076RhoGAP domain
111491712111185RhoGEF domain
333523322SPRY domain
333433322RNA polymerase Rpb1, domain 2
11121219Guanylate kinase
232432218Gelsolin repeat
981214717774UBA/TS-N domain
16151721131617115PHD-finger
121116GGL domain
444644430HECT-domain (ubiquitin-transferase)
221211110Helix-hairpin-helix motif
11121118MSP (Major sperm protein) domain
4541183439Ribonuclease III domain
222222214Region in Clathrin and VPS
332423320RanBP1 domain
11111117PPIC-type PPIASE domain
412431419Zn-finger in Ran binding protein and others
20191525141719129Zinc finger C-x8-C-x5-C-x3-H type (and similar)
221128Poly(ADP-ribose) polymerase catalytic domain
11111117Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
292016300192631441F-box domain
11111117Elongation factor 1 gamma, conserved domain
1113Calpain family cysteine protease
11121118Copper fist DNA binding domain
657956644CRAL/TRIO domain
4521682441BTB/POZ domain
2751317111129113Ricin-type beta-trefoil lectin domain
11121118Inhibitor of Apoptosis domain
222322215Voltage gated chloride channel
221422215Caspase domain
436823430GDSL-like Lipase/Acylhydrolase
11111117Poly-adenylate binding protein, unique domain
11121118POLO box duplicated region
213NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
16151841191416139ABC transporter transmembrane region
41317Integrase core domain
534534529FAD binding domain
11111117S-adenosyl-L-homocysteine hydrolase, NAD binding domain
11111117HAMP domain
222422216ribosomal L5P family C-terminus
556756539Insulinase (Peptidase family M16)
432344424Dehydrogenase E1 component
11111117Lumazine binding domain
555855538Elongation factor G C-terminus
443644429HMGL-like
444844432DnaJ central domain
222222214Ribosomal protein L1p/L10e family
645835637Cation transporting ATPase, C-terminus
7661056747Cation transporter/ATPase, N-terminus
221222213dUTPase
455544431Aconitase C-terminal domain
333433322Amino acid kinase family
11121118N-(5'phosphoribosyl)anthranilate (PRA) isomerase
11121118Acyl transferase domain
11111117Urease beta subunit
243212216Dihydrodipicolinate synthetase family
25262035192226173haloacid dehalogenase-like hydrolase
3612315Glycosyl hydrolases family 2
234433221Glycosyl hydrolases family 18
11111117Proliferating cell nuclear antigen, N-terminal domain
11111117Acylphosphatase
11121118Adenylosuccinate synthetase
113411112Asparaginase, N-terminal
323433321Peptidase S24-like
111411110Inorganic pyrophosphatase
214621218Glycosyl hydrolases family 16
221322214Glycosyl hydrolases family 15
353735329NADH:flavin oxidoreductase / NADH oxidase family
6223246253-hydroxyacyl-CoA dehydrogenase, C-terminal domain
21313212Glycosyl hydrolase family 20, catalytic domain
334533324HhH-GPD superfamily base excision DNA repair protein
11121118AIR carboxylase
623625630GMC oxidoreductase
223522218Asparagine synthase
454844433Septin
11111117EF-1 guanine nucleotide exchange domain
11121118Homoserine dehydrogenase
22535219Flavin-binding monooxygenase-like
433333423tRNA synthetases class I (E and Q), catalytic domain
11111117tRNA synthetases class I (R)
566964642XPG N-terminal domain
97612711961Metallo-beta-lactamase superfamily
332334321Choline/Carnitine o-acyltransferase
11121118Putative esterase
11121118Glycosyl hydrolase family 9
11121118Ferrochelatase
322332318Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
11121118Arginosuccinate synthase
11111117Electron transfer flavoprotein FAD-binding domain
333433322RNB domain
323412Dioxygenase
332432320CNH domain
221422215Diacylglycerol kinase catalytic domain
6641266646Dual specificity phosphatase, catalytic domain
1111116MyTH4 domain
343544326P21-Rho-binding domain
1212121711131289PX domain
122211110Ras association (RalGDS/AF-6) domain
423535426UBX domain
444644430VHS domain
11121118Phosphoinositide 3-kinase C2
222522217DAHP synthetase I family
8671368856Carbon-nitrogen hydrolase
11215N-acetyltransferase
11121118Prephenate dehydratase
333433322Syntaxin
443534427Pumilio-family RNA binding repeat
656836640Histone-like transcription factor (CBF/NF-Y) and archaeal histone
11111117Pterin binding enzyme
11111117ER lumen protein retaining receptor
222322215Glycoprotease family
11111117Histidinol dehydrogenase
333833326impB/mucB/samB family
112Ice nucleation protein repeat
11111117
11121118Ribosomal L15
1111116Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
112Ribosomal L28 family
1111116Ribosomal L29 protein
11111117Ribosomal L39 protein
11111117Ribosomal S17
11111117Ribulose-phosphate 3 epimerase family
11111117Translationally controlled tumour protein
11111117RNA pseudouridylate synthase
676856644Histone deacetylase domain
211622216POT family
211322213PWWP domain
912929118886SET domain
431105326Isochorismatase family
31222313Permease family
11121118Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
535944535XPG I-region
11111117Acetokinase family
2529DNA photolyase
1121117Cation-independent mannose-6-phosphate receptor repeat
21227Nitroreductase family
2125Cytosol aminopeptidase family, catalytic domain
422412Sulfatase
111111176,7-dimethyl-8-ribityllumazine synthase
11111117Ribosomal protein S16
333433322Acyl CoA binding protein
444744431Cullin family
1111116Elongation factor TS
621524626FAD binding domain
3521054433EamA-like transporter family
11121118
7771277754ThiF family