PFAM Domains • Mucor circinelloides MU402 v1.0
Annotations/GenomesCokrec1Helpul1Kircor1Mucci2Muccir1_3Parpar1Pilano1Thaele1Zyghet1TotalAnnotation Description
PFAMs
10,54811,82515,7899,58412,21911,39111,63711,91312,692107,598
11137 transmembrane receptor (Secretin family)
155443254337 transmembrane sweet-taste receptor of 3 GCPR
424453444342434350404ATPase family associated with various cellular activities (AAA)
394565525246464647438ABC transporter
710159999101391ATP synthase alpha/beta family, nucleotide-binding domain
11EGF-like domain
202023172119202021181Elongation factor Tu GTP binding domain
394376374944414452425Helix-loop-helix DNA-binding domain
44477354442Hsp20/alpha crystallin family
182519112220192717178Hsp70 protein
111217141211131114115KH domain
363458413535413839357SH3 domain
111514111214151214118Actin
81119428912811128Ankyrin repeat
91218121310121213111ADP-ribosylation factor family
212337272821222432235Eukaryotic aspartyl protease
87977677866Cyclic nucleotide-binding domain
21311111213Cytochrome c
11111112110Double-stranded RNA binding motif
3243212154EF hand
114Fe-4S binding domain
1111116Fibronectin type III domain
123Globin
76913881171079Glutathione S-transferase, C-terminal domain
34533334533Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
212345272423212327234Homeodomain
45955545547lactate/malate dehydrogenase, NAD binding domain
151625171817161616156Myosin head (motor domain)
215060414134454855395Cytochrome P450
2202413452372462342442502532,270Protein kinase domain
141625181917161615156Pyridine nucleotide-disulphide oxidoreductase
535884606260617265575Ras family
162029151818171821172Response regulator receiver domain
33RNase H
85102125889991101104101896RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
11114Reverse transcriptase (RNA-dependent DNA polymerase)
331133333234Copper/zinc superoxide dismutase (SODC)
21122111213Iron/manganese superoxide dismutases, alpha-hairpin domain
141924161616181921163Subtilase family
213556474734273740344Sugar (and other) transporter
141321151615151415138Thioredoxin
11Thyroglobulin type-1 repeat
22242222220Trypsin
77586828758Tubulin/FtsZ family, GTPase domain
11von Willebrand factor type A domain
11WAP-type (Whey Acidic Protein) 'four-disulfide core'
2739561404229353844450Zinc finger, C2H2 type
512116474131113140Zinc finger, C3HC4 type (RING finger)
871145617301310147Zinc knuckle
46767677555Protein-tyrosine phosphatase
243158454234313040335short chain dehydrogenase
182452292919262337257Zinc-binding dehydrogenase
77111011877876Thiolase, N-terminal domain
32433322224Beta-ketoacyl synthase, N-terminal domain
11241111122Fe-2S iron-sulfur cluster binding domain
12322222521Enolase, C-terminal TIM barrel domain
11Cytochrome C oxidase subunit II, periplasmic domain
9101691091111994Glutamine amidotransferase class-I
121314111211131315114TCP-1/cpn60 chaperonin family
46655586550Glutamine synthetase, catalytic domain
11811111116Triosephosphate isomerase
354252303940374339357E1-E2 ATPase
13141714141414148122Core histone H2A/H2B/H3/H4
112111119Alpha amylase, catalytic domain
101015491110111090Phorbol esters/diacylglycerol binding domain (C1 domain)
989887781175Bacterial transferase hexapeptide (six repeats)
65746776755tRNA synthetases class I (I, L, M and V)
161329181819181718166Cyclin, N-terminal domain
22231212217Carboxylesterase family
65555556648DNA polymerase family B
33454433534ATP synthase subunit C
111111129Legume lectin domain
32544433432Peroxidase
114Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
12111121111Beta-lactamase
21222111113C-5 cytosine-specific DNA methylase
1113NADH dehydrogenase
303249373636343636326Calcineurin-like phosphoesterase
44635445742Cellulase (glycosyl hydrolase family 5)
66766666756tRNA synthetases class II (D, K and N)
546484636261626472586Mitochondrial carrier protein
182031202020192022190Aminotransferase class I and II
578137767666Phosphoribosyl transferase domain
131416151615151515134Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11222111213Phosphoglycerate kinase
33533333329Ribosomal protein S4/S9 N-terminal domain
44744444338Ribosomal protein S12/S23
21222221216Chaperonin 10 Kd subunit
171729232219171820182C2 domain
283851443735353530333PH domain
343557283931333639332bZIP transcription factor
121622151615151618145Aldehyde dehydrogenase family
394789466157504654489Fungal Zn(2)-Cys(6) binuclear cluster domain
382954413934323140338Cytochrome b5-like Heme/Steroid binding domain
21122211113Oxidoreductase molybdopterin binding domain
141421161614141415138Oxidoreductase NAD-binding domain
232026202424232227209SNF2 family N-terminal domain
44644444438Ribosomal protein S7p/S5e
222126222222222325205Ubiquitin-conjugating enzyme
799887891075Isocitrate/isopropylmalate dehydrogenase
35655455543Ribosomal Proteins L2, RNA binding domain
44745444541Hsp90 protein
23333233224Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
12222222116Dihydrofolate reductase
2346635101150Cysteine-rich secretory protein family
44555544541Ribosomal protein S3, C-terminal domain
555655666492-oxoacid dehydrogenases acyltransferase (catalytic domain)
45844445442Catalase
33533333228Disintegrin
513231012961211101UDP-glucoronosyl and UDP-glucosyl transferase
55766655651Aminotransferase class-III
44544444437Ribosomal protein S19
1111111119DNA gyrase B
51210665610666Thiamine pyrophosphate enzyme, central domain
44444434536Lyase
43533333330Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
22322212218Ferritin-like domain
22422222220Adenylate and Guanylate cyclase catalytic domain
11211111110ATP synthase delta (OSCP) subunit
1111111119Orotidine 5'-phosphate decarboxylase / HUMPS family
11211111211Indole-3-glycerol phosphate synthase
32633334229Pyruvate kinase, barrel domain
242930282629302630252Kinesin motor domain
364252394042374038366DnaJ domain
141424141414141416138Proteasome subunit
23422233627Major intrinsic protein
22222222218ATP synthase
8715887778753'5'-cyclic nucleotide phosphodiesterase
11111111210Profilin
44744444641Ribosomal protein L22p/L17e
33533333228Ribosomal protein L14p/L23e
202428222117262135214Ubiquitin family
761067777663Cofilin/tropomyosin-type actin-binding protein
3463334453514-3-3 protein
44744344640Alkaline phosphatase
191934262918151527202Aldo/keto reductase family
192032232019242126204Myb-like DNA-binding domain
8102010101010101098Forkhead domain
44214444431Ribosomal protein L16p/L10e
44544343435Ribosomal protein S14p/S29e
66766466754FKBP-type peptidyl-prolyl cis-trans isomerase
12212222216Glutathione peroxidase
55
11Dehydrin
910161511910912101Flavodoxin
11211111110Calreticulin family
678788871170Aminotransferase class-V
32533312325Ribonucleotide reductase, small chain
546163485952535560505DEAD/DEAH box helicase
798396818984818286761Helicase conserved C-terminal domain
1111111119EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
44544444437Ribosomal protein L23
11111111311Pyridoxal-dependent decarboxylase, C-terminal sheet domain
34734344537Ribosomal protein L5
44744444439Pyridoxal-dependent decarboxylase conserved domain
33512233325Citrate synthase, C-terminal domain
66666666654GHMP kinases N terminal domain
11101411119910994Biotin carboxylase, N-terminal domain
1111111119Tryptophan synthase alpha chain
991010109991388Pyridoxal-phosphate dependent enzyme
112'Paired box' domain
212025232320222223199NUDIX domain
46776656754pfkB family carbohydrate kinase
62225623Glycosyl hydrolases family 28
44644444539Ribosomal protein L3
44744444540Ribosomal protein L11, RNA binding domain
1010151111111291099Histidine phosphatase superfamily (branch 1)
1111111119Thymidylate synthase
710159999101290ATP synthase alpha/beta chain, C terminal domain
121419121310141318125Calponin homology (CH) domain
456125555754Glutamine amidotransferases class-II
33433233226Ribosomal protein S15
11122222114'Cold-shock' DNA-binding domain
35745555544Thaumatin family
111111118Fructose-1-6-bisphosphatase, N-terminal domain
44744444439Ribonucleotide reductase, all-alpha domain
45643455541Ribosomal protein S2
88141010999986SRF-type transcription factor (DNA-binding and dimerisation domain)
334173364038394344387GATA zinc finger
8101521101089899Amino acid permease
7610687661066Prolyl oligopeptidase family
56654556446Ribosomal protein L30p/L7e
43655333436Histidine phosphatase superfamily (branch 2)
1111111119Respiratory-chain NADH dehydrogenase, 30 Kd subunit
45666655851Aconitase family (aconitate hydratase)
3233323221Glycosyl hydrolases family 17
43544333433Ribosomal protein S5, N-terminal domain
76865656655Nucleoside diphosphate kinase
34966644648Tetraspanin family
42433333328Ribosomal protein S10p/S20e
273257223533333240311Arrestin (or S-antigen), N-terminal domain
1111111119Phosphoglucose isomerase
22322222219Carbohydrate phosphorylase
22422222220SecY translocase
11211111110Respiratory-chain NADH dehydrogenase, 49 Kd subunit
33433333429Ribosomal protein L6
55655555748Polyprenyl synthetase
81118111110111112103Hexokinase
109117101089882Dynamin family
1111111119Biopterin-dependent aromatic amino acid hydroxylase
12322222117Transcription factor TFIID (or TATA-binding protein, TBP)
34654444438Rieske [2Fe-2S] domain
22Proton-conducting membrane transporter
131414121413131414121Biotin-requiring enzyme
22422222119Phosphofructokinase
22322222320Ribosomal protein S17
23433323427Hydroxymethylglutaryl-coenzyme A reductase
55766665652FGGY family of carbohydrate kinases, N-terminal domain
33322222322Sodium:dicarboxylate symporter family
7211414121191513116Enoyl-CoA hydratase/isomerase
44444434435Ribosomal protein S9/S16
111115PTS HPr component phosphorylation site
33333333428Transcription factor TFIIB repeat
587998910974Cytidine and deoxycytidylate deaminase zinc-binding region
112111119Molybdopterin oxidoreductase
11152091118151913131Chromo (CHRromatin Organisation MOdifier) domain
11114Phosphatidylinositol-specific phospholipase C, X domain
44755545544D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
551055555550Malic enzyme, N-terminal domain
224322222216-phosphogluconate dehydrogenase, C-terminal domain
67956567859Multicopper oxidase
11192081412161914133WW domain
23333333225Ribosomal RNA adenine dimethylase
1661651921581701641701711801,536WD domain, G-beta repeat
11Calponin family repeat
56556456547Heavy-metal-associated domain
55866655652Adenylate kinase
33423233326Phosphoglucomutase/phosphomannomutase, C-terminal domain
33633333330Ribosomal protein S8
43545223331Ribosomal protein S11
171624131616141615147LIM domain
76815577652Regulator of chromosome condensation (RCC1) repeat
34744444438Ribosomal protein S13/S18
1111111119Tau and MAP protein, tubulin-binding repeat
22222222218chorismate binding enzyme
8898888877260s Acidic ribosomal protein
44544443436Prenyltransferase and squalene oxidase repeat
101112911101110993Protein kinase C terminal domain
1113Spectrin repeat
11211121111Single-strand binding protein family
11Type II/IV secretion system protein
112111119S-adenosylmethionine synthetase, N-terminal domain
151725201718171917165Bromodomain
161526151716161622159Acyl-CoA dehydrogenase, C-terminal domain
202023262520222821205Ubiquitin carboxyl-terminal hydrolase
1111111119Ribosomal protein L36
11311111414Ribonuclease T2 family
171831201919171919179HSF-type DNA-binding
12222323219SRP54-type protein, GTPase domain
12222222217Urease alpha-subunit, N-terminal domain
44755656648Serine carboxypeptidase
121313131312121311112Phosphatidylinositol 3- and 4-kinase
22322223220Transketolase, thiamine diphosphate binding domain
1111111119WHEP-TRS domain
22322222219Inositol monophosphatase family
1061110108861079Glutaredoxin
22422222321Isocitrate lyase family
22322222219Serine hydroxymethyltransferase
1111111119Iron-containing alcohol dehydrogenase
44644444337Ribosomal protein L10
11617106978983KOW motif
1111111119Ribosomal protein L34
1111111119Ribosomal protein L33
33333333327RF-1 domain
12111118Sodium:solute symporter family
1111111119Imidazoleglycerol-phosphate dehydratase
1111111119DNA polymerase family A
22222222218IMP dehydrogenase / GMP reductase domain
42433332327Glucose-6-phosphate dehydrogenase, NAD binding domain
10101710101010101097Protein phosphatase 2C
879676771067Nucleotidyl transferase
12322122217Carbonic anhydrase
53323222224Phosphoribulokinase / Uridine kinase family
811128861011983Fatty acid desaturase
66677666656MutS domain V
11122111111Delta-aminolevulinic acid dehydratase
12322222622Arginase family
67666666655MCM P-loop domain
44735445642Squalene/phytoene synthase
161834172320201719184FHA domain
11NADH-ubiquinone/plastoquinone oxidoreductase chain 6
304350373834343936341AMP-binding enzyme
81114121212111112103G-protein alpha subunit
232234212623192223213HMG (high mobility group) box
11Cytochrome c oxidase subunit III
9916710998986His Kinase A (phospho-acceptor) domain
91014101099101192Armadillo/beta-catenin-like repeat
242825362724282521238Tetratricopeptide repeat
561389659566Ion transport protein
1111111119DNA gyrase/topoisomerase IV, subunit A
5631010665354BRCA1 C Terminus (BRCT) domain
888987771072Glycosyl transferases group 1
22242222220Glycosyl transferase family 2
55825454543SAM domain (Sterile alpha motif)
11112221112linker histone H1 and H5 family
112111119Ribosomal protein L7/L12 C-terminal domain
12222222217Urease, gamma subunit
33744433334CoA-ligase
561189697869Phosphopantetheine attachment site
33322222221Formyl transferase
131515151515151515133Metallopeptidase family M24
12816331413131211132Leucine Rich Repeat
868258867682alpha/beta hydrolase fold
33533333329RNA polymerase Rpb2, domain 6
910168109108989PB1 domain
22222222218Staphylococcal nuclease homologue
272940273031302935278Rab-GTPase-TBC domain
1111111119Tudor domain
23123332221WH1 domain
65657666653Zinc finger, ZZ type
22221112215HRDC domain
151524181617151716153CBS domain
35433355536Ribosomal protein L13
43544433434Ribosomal protein L4/L1 family
1111111119Clp protease
45634444337S1 RNA binding domain
1111111119HIUase/Transthyretin family
57857676859AhpC/TSA family
54445444438tRNA synthetases class I (W and Y)
12122122215UvrD/REP helicase N-terminal domain
12141681412131311113Rhodanese-like domain
101317121414121314119Universal stress protein family
262839433126252631275Acetyltransferase (GNAT) family
11211111110SecE/Sec61-gamma subunits of protein translocation complex
11111111210C-terminal regulatory domain of Threonine dehydratase
22222222218AIR synthase related protein, N-terminal domain
8891199991082tRNA synthetase class II core domain (G, H, P, S and T)
33333333327SpoU rRNA Methylase family
33333333428Tetrapyrrole (Corrin/Porphyrin) Methylases
21111111110Glycosyl transferase family, a/b domain
11114PDZ domain
12222222217Class II Aldolase and Adducin N-terminal domain
22Adenoviral fibre protein (repeat/shaft region)
22212222116Diacylglycerol kinase accessory domain
911146101012111497Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
111214121012131214110Fes/CIP4, and EFC/F-BAR homology domain
571097677664IQ calmodulin-binding motif
33333333327Phosphoinositide 3-kinase family, accessory domain (PIK domain)
66986666760Phospholipase D Active site motif
14192782015181817156Regulator of G protein signaling domain
991410101010101193GTPase-activator protein for Ras-like GTPase
182032172019202018184RasGEF domain
11132391212141314121RasGEF N-terminal motif
273752333834363738332RhoGAP domain
323550313631363435320RhoGEF domain
101216121211101310106SPRY domain
33333333529RNA polymerase Rpb1, domain 2
1111111119Guanylate kinase
58877788765Gelsolin repeat
121115131113101113109UBA/TS-N domain
262534232424292531241PHD-finger
24334344431GGL domain
10101210101010101092HECT-domain (ubiquitin-transferase)
11121111110Helix-hairpin-helix motif
23512323324MSP (Major sperm protein) domain
22432222221Ribonuclease III domain
66626666549Region in Clathrin and VPS
22222222218RanBP1 domain
11121211111PPIC-type PPIASE domain
34525544537Zn-finger in Ran binding protein and others
161520171414131315137Zinc finger C-x8-C-x5-C-x3-H type (and similar)
12121119B-box zinc finger
111111118Poly(ADP-ribose) polymerase catalytic domain
22212222217Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
1013451051412171319248F-box domain
32322222321Elongation factor 1 gamma, conserved domain
11111111210Calpain family cysteine protease
56866465753Copper fist DNA binding domain
81117101111111111101CRAL/TRIO domain
13121971212151516121BTB/POZ domain
7812710877975Ricin-type beta-trefoil lectin domain
191113117Inhibitor of Apoptosis domain
22222222218Voltage gated chloride channel
34655444439Caspase domain
81118151612121215119GDSL-like Lipase/Acylhydrolase
451024656951Poly-adenylate binding protein, unique domain
111111118POLO box duplicated region
161932252520191921196ABC transporter transmembrane region
11Integrase core domain
7812897881077FAD binding domain
11111111210Condensation domain
11211111110S-adenosyl-L-homocysteine hydrolase, NAD binding domain
22432222221HAMP domain
34744444539ribosomal L5P family C-terminus
9915797109984Insulinase (Peptidase family M16)
66766566654Dehydrogenase E1 component
1111111119Lumazine binding domain
77877677763Elongation factor G C-terminus
669666106661HMGL-like
76777567759DnaJ central domain
111111118Sulfotransferase domain
45635555543Ribosomal protein L1p/L10e family
151718131616151723150Cation transporting ATPase, C-terminus
192729182121192519198Cation transporter/ATPase, N-terminus
12115dUTPase
45666655851Aconitase C-terminal domain
661077666559Amino acid kinase family
11111111210N-(5'phosphoribosyl)anthranilate (PRA) isomerase
32533322326Acyl transferase domain
12222222217Urease beta subunit
21333311118Dihydrodipicolinate synthetase family
262931492629243427275haloacid dehalogenase-like hydrolase
81218141413101313115Glycosyl hydrolases family 18
11211111110Proliferating cell nuclear antigen, N-terminal domain
11