PFAM Domains • Lyophyllum atratum CBS 144462 v1.0
Annotations/GenomesAgabi_varbisH97_2Amamu1Amath1Armga1Armost1Armosto1Auramp1Conpu1Copang1Copci_AmutBmut1Copmar1Copmic2Crafun1Crula1Cylto1Fishe1Fompi3Galma1Gymlu1Hebcy2Hypsu1Lacam2Lacbi2Lenti6_1Lyoat1Ompol1Phchr2Phohig1PleosPC15_2Plucer1PosplRSB12_1Ricmel1Schco3TotalAnnotation Description
PFAMs
6,9507,8557,06610,40010,01513,84710,4008,32814,4647,7208,1169,3259,58410,4588,3847,1058,1749,49710,6747,6758,5127,7938,6568,84210,9116,9398,22811,5847,9728,8107,7468,9458,590299,565
11111167 transmembrane receptor (rhodopsin family)
3843395348464447614445484145404150484245503939465042474747444241431,485ATPase family associated with various cellular activities (AAA)
3635316566704447794547574359524247686044504349515244496339514671461,691ABC transporter
444444544444444644444544444444444136ATP synthase alpha/beta family, nucleotide-binding domain
12211111111EGF-like domain
161714151515151520151516152016171415171817171614181517241514141815534Elongation factor Tu GTP binding domain
9141013141514101511111491212111611151211142011121211181113111113416Helix-loop-helix DNA-binding domain
41487101181097123695578777810118791776569267Hsp20/alpha crystallin family
79791010812288826128910161391211131511988911239197384Hsp70 protein
9988888877988988888789888788889119270KH domain
11Kunitz/Bovine pancreatic trypsin inhibitor domain
112Ribulose bisphosphate carboxylase large chain, catalytic domain
11111111311111111111111126SH2 domain
302624313121172621303132171628242529362829324025222722212831213527883SH3 domain
111111111111111215121113111110111011111111161510111210131111101311380Actin
184522704911182323801968973272628741113137279524827251722462942601,410Ankyrin repeat
11PAN domain
5778887611881088777988899710779887117262ADP-ribosylation factor family
153115323028225220131513202318204028391524252447252459242422455526913Eukaryotic aspartyl protease
333544334333333333333333333333433105Cyclic nucleotide-binding domain
11125Cytochrome b(C-terminal)/b6/petD
12227Cytochrome b/b6/petB
11111111211112121211111111121111138Cytochrome c
614814781211867851061076118514118115576149513285Double-stranded RNA binding motif
1922182022421421919231122151717171918191820116231927152220511EF hand
111221111121113111212111111344Fe-4S binding domain
111111111211111111111111211130Fibronectin type III domain
111115Globin
27191610979383713111371417814141351191319111022987192015474Glutathione S-transferase, C-terminal domain
221111112322321222121125211112211165Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
214119Hemopexin
78913111113102110101898971189910111019141099101381211357Homeodomain
112222111111117Laminin EGF domain
22233223222322224232222223233222276lactate/malate dehydrogenase, NAD binding domain
554465669547646575757675645656456183Myosin head (motor domain)
116125743242742719522618613415517397167103911701742638915487861911241181551501431581971361145,120Cytochrome P450
1361621322212262592241633551361751991801791861671541921862061521932171852641231532321551771503501626,351Protein kinase domain
132015171614142526171622141516141920331719121419121525182016172011581Pyridine nucleotide-disulphide oxidoreductase
254323252527292535342734342825272535282930375324322428332629263227984Ras family
6981212131391088888108981179779811119101291512314Response regulator receiver domain
763232132710692830108851055958171329911101710380RNase H
6070697770666563746871805862737067697565628371706768716667696268702,266RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
12336131274366Reverse transcriptase (RNA-dependent DNA polymerase)
11Serpin (serine protease inhibitor)
14441121222121121111111121152Copper/zinc superoxide dismutase (SODC)
13223222522222222322233443332324384Iron/manganese superoxide dismutases, alpha-hairpin domain
7121710122282251222261714453165128555115418912283346Subtilase family
2727234743514947422119263943554130395422332321344233275327273024411,160Sugar (and other) transporter
129101716151081291110111212891312101011101011910141510101113370Thioredoxin
565554555556555665696565555665545176Tubulin/FtsZ family, GTPase domain
313256614361437714574622946253140von Willebrand factor type A domain
37804311295434859476752792117105396760101587566635923275223577695481001,994Zinc finger, C2H2 type
4360529998139531455616810962486674745666676669339611159745570711,735Zinc finger, C3HC4 type (RING finger)
835123536801779162018191889181813394720161134191114141644169513221,259Zinc knuckle
22222332422224222362222232232322280Protein-tyrosine phosphatase
5448441491431371111079448616149978068126801524811551491196463831348069105641122,865short chain dehydrogenase
2728314243404771722932423036713653355925372631693945594341365832471,412Zinc-binding dehydrogenase
644445546446555454554444946845544159Thiolase, N-terminal domain
3441010102643365723881045552252522783165Beta-ketoacyl synthase, N-terminal domain
333331131333113333334473333233333942Fe-2S iron-sulfur cluster binding domain
1315Papain family cysteine protease
11111111312212111111211111221111141Enolase, C-terminal TIM barrel domain
111227Cytochrome C and Quinol oxidase polypeptide I
112Cytochrome C oxidase subunit II, periplasmic domain
97987888988108877987778139988878978269Glutamine amidotransferase class-I
1011121010101010291124121210915101012111312131010101012101091810395TCP-1/cpn60 chaperonin family
1111116ATP synthase A chain
435545364433333373344374344533433128Glutamine synthetase, catalytic domain
11111111111111111211111111121111135Triosephosphate isomerase
71191313181915201112111818111016141214141320151681218131613129451E1-E2 ATPase
161915211919131822161720151418151515271623252418171616141717151822592Core histone H2A/H2B/H3/H4
2461111131232421237Copper binding proteins, plastocyanin/azurin family
65812121318599777812176812857975987976712287Alpha amylase, catalytic domain
555675565665546466545666456536565174Phorbol esters/diacylglycerol binding domain (C1 domain)
244645425547355443553444356454454141Bacterial transferase hexapeptide (six repeats)
333575535333443335433333434923253124tRNA synthetases class I (I, L, M and V)
1010111010111213171210181113131712151511131414159131011911111013404Cyclin, N-terminal domain
191222374236203729192728252825202134481640141540212012292618161826840Carboxylesterase family
544444447445444244445444444444144133DNA polymerase family B
333333333333334333333343333333433102ATP synthase subunit C
522111212217410616172123413822332477173210192262341Peroxidase
31533345132711666161257842610231439633191Beta-lactamase
433576664554444434744444435454446147C-5 cytosine-specific DNA methylase
11114NADH dehydrogenase
222722303024233026312930262526252730303129333328242526252732242824902Calcineurin-like phosphoesterase
88911121816143112131627231271422161014991222101424131312196476Cellulase (glycosyl hydrolase family 5)
585655655556555567868556666655676190tRNA synthetases class II (D, K and N)
3438364441433940413637384238383638414037363741384035384234383741371,271Mitochondrial carrier protein
123recA bacterial DNA recombination protein
131715202020192319171719131616121616231413151220191615181314191416549Aminotransferase class I and II
566773473677447668767787466376677197Phosphoribosyl transferase domain
131312151514181116141212111215151312201214121314141114161013141214446Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11Ribosome inactivating protein
11111111211111121121111111111111136Phosphoglycerate kinase
22223222222222222222223222222222268Ribosomal protein S4/S9 N-terminal domain
22223223222222222222222222222222268Ribosomal protein S12/S23
21122211211111111112111111111111139Chaperonin 10 Kd subunit
141416171716171217161514151417121327171722141816161615151828151518543C2 domain
201618222011817111919158816201824201618222423101623161822192419580PH domain
56687910510755991264586667610971166476233bZIP transcription factor
241313282326181734121613151813121818371217151514221521181915191816604Aldehyde dehydrogenase family
505851124122797664694861635257150566163108666679739562308644537044123882,391Fungal Zn(2)-Cys(6) binuclear cluster domain
202023252423212426242323222123212527222423222325241824252223252325763Cytochrome b5-like Heme/Steroid binding domain
113221432231323324233423422141174Oxidoreductase molybdopterin binding domain
67710109699109138685119128888127101688610811292Oxidoreductase NAD-binding domain
192321272626252825252835222325202129292731242224422426252633242822855SNF2 family N-terminal domain
22222222322322222322223221232222270Ribosomal protein S7p/S5e
182120242324241926232123222222212123252323222321232122262027222121737Ubiquitin-conjugating enzyme
656555555555665666756665765656565183Isocitrate/isopropylmalate dehydrogenase
22222222322222222222222222232222268Ribosomal Proteins L2, RNA binding domain
22222222222322324322322222322222374Hsp90 protein
22233322222222322332232322252222277Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111111111111311111111111111111134Dihydrofolate reductase
112138Chitin recognition protein
4166673352253663244521095242256225139Cysteine-rich secretory protein family
11111111111111111111111111111111133Ribosomal protein S3, C-terminal domain
2165232122216131421612912275385Cupin
1111223161111612122211141Annexin
128415Eukaryotic-type carbonic anhydrase
33Chalcone and stilbene synthases, N-terminal domain
3433334333553334333343334323433431092-oxoacid dehydrogenases acyltransferase (catalytic domain)
3214915234455233235523113235322432116Catalase
11111111112111111111111111111131Disintegrin
211412127463101163675510111109UDP-glucoronosyl and UDP-glucosyl transferase
5556665576565568810555666555555555187Aminotransferase class-III
23222222222222222322224222222222270Ribosomal protein S19
11111111111111111121111111111111134DNA gyrase B
323333444444335334434235433453334115Thiamine pyrophosphate enzyme, central domain
333444335335443334435443443433333117Lyase
21222221422322131222233132221112265Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1111111111113111122221111121111139Adenylate and Guanylate cyclase catalytic domain
1211111111111111111111111111112134ATP synthase delta (OSCP) subunit
11111111111111111111111111111111133Orotidine 5'-phosphate decarboxylase / HUMPS family
13232211224222212121122122111121257Indole-3-glycerol phosphate synthase
11Neurohypophysial hormones, N-terminal Domain
22233421222222212534222122122111269Aromatic amino acid lyase
11111121111112111111111