PFAM Domains • Armillaria tabescens CCBAS 213 v1.0
Annotations/GenomesArmcep1Armect1Armga1Armlut1Armme1_1Armnab1Armost1Armosto1Armtab1Guyne1TotalAnnotation Description
PFAMs
15,08210,24810,40012,9488,64812,40210,01513,84712,4738,258114,321
111111177 transmembrane receptor (rhodopsin family)
45465362424548464544476ATPase family associated with various cellular activities (AAA)
71506569656266706450632ABC transporter
444444444440ATP synthase alpha/beta family, nucleotide-binding domain
224EGF-like domain
15151515151515151515150Elongation factor Tu GTP binding domain
14131314131314151311133Helix-loop-helix DNA-binding domain
13127129111011137105Hsp20/alpha crystallin family
129912810101010898Hsp70 protein
888878888879KH domain
11114SH2 domain
19193118291831212034240SH3 domain
13111114131111111212119Actin
198701433134911627250Ankyrin repeat
878868888776ADP-ribosylation factor family
30283238292930282919292Eukaryotic aspartyl protease
445444445442Cyclic nucleotide-binding domain
1111111119Cytochrome c
11714106117811691Double-stranded RNA binding motif
3220220222432098EF hand
122213114Fe-4S binding domain
11114Fibronectin type III domain
105101289978785Glutathione S-transferase, C-terminal domain
211111111111Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
119131191011111311109Homeodomain
22Laminin EGF domain
223332322325lactate/malate dehydrogenase, NAD binding domain
544454654546Myosin head (motor domain)
3251923243212462892742713111662,719Cytochrome P450
2741872212381542522262592581582,227Protein kinase domain
12111715171316141115141Pyridine nucleotide-disulphide oxidoreductase
26262527222725272925259Ras family
11121215111112131110118Response regulator receiver domain
191123276202132172178RNase H
68677772716570666472692RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
485271336849Reverse transcriptase (RNA-dependent DNA polymerase)
5541044445853Copper/zinc superoxide dismutase (SODC)
222222322221Iron/manganese superoxide dismutases, alpha-hairpin domain
191310206171222146139Subtilase family
59524753435243515946505Sugar (and other) transporter
19141719121516151714158Thioredoxin
555555546550Tubulin/FtsZ family, GTPase domain
536317von Willebrand factor type A domain
474211254565595435497655Zinc finger, C2H2 type
1589912461098131967387Zinc finger, C3HC4 type (RING finger)
2696361119512801771217815Zinc knuckle
332323232225Protein-tyrosine phosphatase
15290149141122148143137156951,333short chain dehydrogenase
39374240414243404539408Zinc-binding dehydrogenase
554545455446Thiolase, N-terminal domain
6710126910109584Beta-ketoacyl synthase, N-terminal domain
1131213113172Fe-2S iron-sulfur cluster binding domain
111111111110Enolase, C-terminal TIM barrel domain
988988788780Glutamine amidotransferase class-I
10101011111010101010102TCP-1/cpn60 chaperonin family
555455455447Glutamine synthetase, catalytic domain
111111111110Triosephosphate isomerase
18181322121713181914164E1-E2 ATPase
1692120162219192018180Core histone H2A/H2B/H3/H4
114141611323Copper binding proteins, plastocyanin/azurin family
12131213121312131311124Alpha amylase, catalytic domain
546436754650Phorbol esters/diacylglycerol binding domain (C1 domain)
636536455548Bacterial transferase hexapeptide (six repeats)
745456754350tRNA synthetases class I (I, L, M and V)
911101169101191197Cyclin, N-terminal domain
37293739333642365133373Carboxylesterase family
564444445444DNA polymerase family B
333333333330ATP synthase subunit C
1210111210121212116108Peroxidase
433313334229Beta-lactamase
845555767557C-5 cytosine-specific DNA methylase
27253028252730242627269Calcineurin-like phosphoesterase
1917112211191218196154Cellulase (glycosyl hydrolase family 5)
556555555551tRNA synthetases class II (D, K and N)
42404442324141434342410Mitochondrial carrier protein
11recA bacterial DNA recombination protein
18192020141820202516190Aminotransferase class I and II
447464734750Phosphoribosyl transferase domain
14141514121415141414140Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
111111111110Phosphoglycerate kinase
122212322219Ribosomal protein S4/S9 N-terminal domain
222222322221Ribosomal protein S12/S23
222222222220Chaperonin 10 Kd subunit
16151716141417161515155C2 domain
12102210171220111020144PH domain
12108107127911793bZIP transcription factor
27252822202923263021251Aldehyde dehydrogenase family
67961241174811612279100113982Fungal Zn(2)-Cys(6) binuclear cluster domain
23242524232424232522237Cytochrome b5-like Heme/Steroid binding domain
223222222221Oxidoreductase molybdopterin binding domain
10710118101097890Oxidoreductase NAD-binding domain
28252733232526262626265SNF2 family N-terminal domain
222222222220Ribosomal protein S7p/S5e
22252426212323242321232Ubiquitin-conjugating enzyme
555555556551Isocitrate/isopropylmalate dehydrogenase
322222222221Ribosomal Proteins L2, RNA binding domain
222322222221Hsp90 protein
223223332224Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111111119Dihydrofolate reductase
556767676661Cysteine-rich secretory protein family
111111111110Ribosomal protein S3, C-terminal domain
646465522343Cupin
111111121111Annexin
3333333333302-oxoacid dehydrogenases acyltransferase (catalytic domain)
4545549156461Catalase
1111111119Disintegrin
431524143128UDP-glucoronosyl and UDP-glucosyl transferase
766865666662Aminotransferase class-III
622422222226Ribosomal protein S19
111111111110DNA gyrase B
333233333531Thiamine pyrophosphate enzyme, central domain
444454444441Lyase
222342223224Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
111111111110Adenylate and Guanylate cyclase catalytic domain
111111111110ATP synthase delta (OSCP) subunit
111111111110Orotidine 5'-phosphate decarboxylase / HUMPS family
323224222224Indole-3-glycerol phosphate synthase
333333344332Aromatic amino acid lyase
111111111110Pyruvate kinase, barrel domain
12101111121010101010106Kinesin motor domain
29313131292933303130304DnaJ domain
14141417141414141714146Proteasome subunit
555865556454Major intrinsic protein
111111111110ATP synthase
196141310141010154115Glycosyl hydrolase family 1
1111111111103'5'-cyclic nucleotide phosphodiesterase
111111111110Profilin
222212222219Ribosomal protein L22p/L17e
223212222220Ribosomal protein L14p/L23e
21182527152324221918212Ubiquitin family
555665555552Cofilin/tropomyosin-type actin-binding protein
22232222222114-3-3 protein
113141311319Alkaline phosphatase
111111111110Zinc carboxypeptidase
72486179506757576539595Aldo/keto reductase family
7913111091381013103Myb-like DNA-binding domain
10109106109109790Forkhead domain
421312122119Ribosomal protein L16p/L10e
22222222218Ribosomal protein S14p/S29e
455555556550FKBP-type peptidyl-prolyl cis-trans isomerase
112111111212Glutathione peroxidase
11114
6698861075671Flavodoxin
111111111110Calreticulin family
1511121711141314167130Common central domain of tyrosinase
9999710988886Aminotransferase class-V
821552107145270Ribonucleotide reductase, small chain
77525565466351727845604DEAD/DEAH box helicase
100789492868894929685905Helicase conserved C-terminal domain
211112111112EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
222322222221Ribosomal protein L23
111111111110Pyridoxal-dependent decarboxylase, C-terminal sheet domain
111111111110Ribosomal protein L5
645455565348Pyridoxal-dependent decarboxylase conserved domain
443434345337Citrate synthase, C-terminal domain
555545555549GHMP kinases N terminal domain
666676656660Biotin carboxylase, N-terminal domain
111111111110Tryptophan synthase alpha chain
898878888880Pyridoxal-phosphate dependent enzyme
13131514101315121315133NUDIX domain
555745555551pfkB family carbohydrate kinase
18221818211616152116181Glycosyl hydrolases family 28
222122222219Ribosomal protein L3
222221222219Ribosomal protein L11, RNA binding domain
1310121351212131010110Histidine phosphatase superfamily (branch 1)
111111111110Thymidylate synthase
444444444440ATP synthase alpha/beta chain, C terminal domain
445534446544Calponin homology (CH) domain
226252523433Glutamine amidotransferases class-II
222232222221Ribosomal protein S15
445455445444Thaumatin family
111111111110Fructose-1-6-bisphosphatase, N-terminal domain
111111211111Ribonucleotide reductase, all-alpha domain
222222222220Ribosomal protein S2
122222222219SRF-type transcription factor (DNA-binding and dimerisation domain)
1091010810119101097GATA zinc finger
14123214211432161529199Amino acid permease
1315Bacterial regulatory proteins, crp family
666655567557Prolyl oligopeptidase family
221212112115Ribosomal protein L30p/L7e
889899988985Histidine phosphatase superfamily (branch 2)
111111111110Respiratory-chain NADH dehydrogenase, 30 Kd subunit
555755565553Aconitase family (aconitate hydratase)
6116565665460Glycosyl hydrolase family 10
222212222219Glycosyl hydrolases family 17
222222222220Ribosomal protein S5, N-terminal domain
222222222220Nucleoside diphosphate kinase
242312223122Tetraspanin family
221212122116Ribosomal protein S10p/S20e
421415243228Arrestin (or S-antigen), N-terminal domain
111111111110Phosphoglucose isomerase
111121111111Carbohydrate phosphorylase
111111111110SecY translocase
121111111111Respiratory-chain NADH dehydrogenase, 49 Kd subunit
222222222220Ribosomal protein L6
29518131228111664142Polyprenyl synthetase
222222222220Hexokinase
161112156131012138116Dynamin family
111111211111Transcription factor TFIID (or TATA-binding protein, TBP)
133323322224Rieske [2Fe-2S] domain
122112110Phytochrome region
889989999886Biotin-requiring enzyme
111111111110Phosphofructokinase
222212222219Ribosomal protein S17
211111111111Hydroxymethylglutaryl-coenzyme A reductase
334343433333FGGY family of carbohydrate kinases, N-terminal domain
991010109999892Enoyl-CoA hydratase/isomerase
222222222220Ribosomal protein S9/S16
222222322322Transcription factor TFIIB repeat
6889399781077Cytidine and deoxycytidylate deaminase zinc-binding region
111111111110Molybdopterin oxidoreductase
341811106588235137706Chromo (CHRromatin Organisation MOdifier) domain
333333332329Phosphatidylinositol-specific phospholipase C, Y domain
553835355345Phosphatidylinositol-specific phospholipase C, X domain
666756666660D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
323333332227Malic enzyme, N-terminal domain
1111111111106-phosphogluconate dehydrogenase, C-terminal domain
26282625262525252719252Multicopper oxidase
79131010914791098WW domain
222212222219Ribosomal RNA adenine dimethylase
1391131301461021271201211281131,239WD domain, G-beta repeat
434434443538Heavy-metal-associated domain
333333333330Adenylate kinase
221312122117Phosphoglucomutase/phosphomannomutase, C-terminal domain
221212122116Ribosomal protein S8
222622222224Ribosomal protein S11
556525555649LIM domain
544445354442Regulator of chromosome condensation (RCC1) repeat
222222222220Ribosomal protein S13/S18
222222222220chorismate binding enzyme
33343333333160s Acidic ribosomal protein
444434444439Prenyltransferase and squalene oxidase repeat
446464644648Protein kinase C terminal domain
111111111110Single-strand binding protein family
111111111110S-adenosylmethionine synthetase, N-terminal domain
10101010111010101110102Bromodomain
7577777710771Acyl-CoA dehydrogenase, C-terminal domain
18151816161715151515160Ubiquitin carboxyl-terminal hydrolase
111115Ribosomal protein L36
222222222220Ribonuclease T2 family
555655555551HSF-type DNA-binding
222222222220SRP54-type protein, GTPase domain
111111111110Urease alpha-subunit, N-terminal domain
18141618181615181516164Serine carboxypeptidase
1113Apoptosis regulator proteins, Bcl-2 family
888888888880Phosphatidylinositol 3- and 4-kinase
444554445443Transketolase, thiamine diphosphate binding domain
113211110Glycosyl hydrolases family 11
111111111110WHEP-TRS domain
656546574452Inositol monophosphatase family
555555556551Glutaredoxin
223232322324Isocitrate lyase family
222332222222Serine hydroxymethyltransferase
667546666759Iron-containing alcohol dehydrogenase
222312222119Ribosomal protein L10
425953533544KOW motif
11111117Ribosomal protein L34
1111116Ribosomal protein L33
232313222222RF-1 domain
333314444433Sodium:solute symporter family
111111111110Imidazoleglycerol-phosphate dehydratase
111111111110DNA polymerase family A
111111111110IMP dehydrogenase / GMP reductase domain
111111111110Glucose-6-phosphate dehydrogenase, NAD binding domain
12991581211121210110Protein phosphatase 2C
333323333329Nucleotidyl transferase
756776776361Carbonic anhydrase
211111111111Phosphoribulokinase / Uridine kinase family
18191820151920172215183Fatty acid desaturase
876666677665MutS domain V
111111111110Delta-aminolevulinic acid dehydratase
555555555651Arginase family
666666666660MCM P-loop domain
221212122116Squalene/phytoene synthase
1511121391312121311121FHA domain
84547177567369747446678AMP-binding enzyme
20152222192021202115195G-protein alpha subunit
29213030262626262421259HMG (high mobility group) box
7781168888778His Kinase A (phospho-acceptor) domain
334333433332Armadillo/beta-catenin-like repeat
21154119322032191731247Tetratricopeptide repeat
333433482437Ion transport protein
111111111110DNA gyrase/topoisomerase IV, subunit A
11Binding-protein-dependent transport system inner membrane component
7811881011981191BRCA1 C Terminus (BRCT) domain
7594881075669Glycosyl transferases group 1
435344433437Glycosyl transferase family 2
12111221213SAM domain (Sterile alpha motif)
444444444440linker histone H1 and H5 family
111111111110Ribosomal protein L7/L12 C-terminal domain
665656566253Pectate lyase
524416452235ribonuclease
111111111110Urease, gamma subunit
333333334331CoA-ligase
23131819132215221812175Phosphopantetheine attachment site
323623337335Formyl transferase
181119159151417209147Metallopeptidase family M24
321438214241264Leucine Rich Repeat
31167429592077242149400alpha/beta hydrolase fold
343333334332RNA polymerase Rpb2, domain 6
555555555550PB1 domain
222222222220Staphylococcal nuclease homologue
1212101471210131211113Rab-GTPase-TBC domain
111111111110Tudor domain
1131222113WH1 domain
646736555552Zinc finger, ZZ type
111211212113HRDC domain
671387710661080CBS domain
222222222220Ribosomal protein L13
222222222220Ribosomal protein L4/L1 family
11121111110Clp protease
344524334335S1 RNA binding domain
11111111210HIUase/Transthyretin family
868986884772AhpC/TSA family
444454444441tRNA synthetases class I (W and Y)
721614174134UvrD/REP helicase N-terminal domain
91059393910673Rhodanese-like domain
222222222220Universal stress protein family
18163120222031191927223Acetyltransferase (GNAT) family
1111111119SecE/Sec61-gamma subunits of protein translocation complex
111111111110C-terminal regulatory domain of Threonine dehydratase
222222222220AIR synthase related protein, N-terminal domain
656575655656tRNA synthetase class II core domain (G, H, P, S and T)
1113Phage integrase family
625222443333Tetrapyrrole (Corrin/Porphyrin) Methylases
111111111110Glycosyl transferase family, a/b domain
222322222322Class II Aldolase and Adducin N-terminal domain
444434444439Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
776767666664Fes/CIP4, and EFC/F-BAR homology domain
223242422326IQ calmodulin-binding motif
222222222220Phosphoinositide 3-kinase family, accessory domain (PIK domain)
113131421320Phospholipase D Active site motif
431414144127Regulator of G protein signaling domain
444434444439GTPase-activator protein for Ras-like GTPase
887878788675RasGEF domain
768777877771RasGEF N-terminal motif
14131514131215131211132RhoGAP domain
18181717141817201715171RhoGEF domain
444444443439SPRY domain
333333332329RNA polymerase Rpb1, domain 2
111211111111Guanylate kinase
434444443438Gelsolin repeat
458695858866UBA/TS-N domain
12131815121620131316148PHD-finger
12122112113GGL domain
555555555550HECT-domain (ubiquitin-transferase)
113131432221Helix-hairpin-helix motif
22BRCA2 repeat
111211111111MSP (Major sperm protein) domain
539565665858Ribonuclease III domain
442424244232Region in Clathrin and VPS
443433344335RanBP1 domain
112121212215PPIC-type PPIASE domain
213324332326Zn-finger in Ran binding protein and others
16134118241634141829223Zinc finger C-x8-C-x5-C-x3-H type (and similar)
111111111110B-box zinc finger
646537538451Poly(ADP-ribose) polymerase catalytic domain
222212222219Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
44272345097402454543126951F-box domain
111111111110Elongation factor 1 gamma, conserved domain
134312216225Calpain family cysteine protease
12222212216Copper fist DNA binding domain
777757778769CRAL/TRIO domain
47332351194828474313352BTB/POZ domain
114141412120Ricin-type beta-trefoil lectin domain
111111111110Inhibitor of Apoptosis domain
334323333330Voltage gated chloride channel
1854117715995172118140124291,240Caspase domain
11412158111110128102GDSL-like Lipase/Acylhydrolase
222122222118Poly-adenylate binding protein, unique domain
1111