PFAM Domains • Dissoconium aciculare v1.0
Annotations/GenomesAltbr1CocheC5_3Disac1Dotse1Hyspu1Mycgr3Sepmu1TotalAnnotation Description
PFAMs
5,9039,2957,0698,1109,0166,4207,52753,340
117 transmembrane receptor (rhodopsin family)
32414145624241304ATPase family associated with various cellular activities (AAA)
37423832474332271ABC transporter
444444428ATP synthase alpha/beta family, nucleotide-binding domain
11EGF-like domain
1314141413141496Elongation factor Tu GTP binding domain
1113101410101381Helix-loop-helix DNA-binding domain
132232215Hsp20/alpha crystallin family
687777749Hsp70 protein
889899960KH domain
11Ribulose bisphosphate carboxylase large chain, catalytic domain
11111117SH2 domain
21222121232323154SH3 domain
9101010107965Actin
358878371004131410Ankyrin repeat
4826214137PAN domain
777767748ADP-ribosylation factor family
82261012191188Eukaryotic aspartyl protease
244444426Cyclic nucleotide-binding domain
22Cytochrome b(C-terminal)/b6/petD
22Cytochrome b/b6/petB
11111117Cytochrome c
214112314Double-stranded RNA binding motif
18181817182019128EF hand
211121194Fe-4S binding domain
242323420Fibronectin type III domain
111115Globin
109122117161499Glutathione S-transferase, C-terminal domain
11111117Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
5856103542Homeodomain
443222320lactate/malate dehydrogenase, NAD binding domain
654555434Myosin head (motor domain)
6315673781587374675Cytochrome P450
84115117105147113118799Protein kinase domain
9171316221513105Pyridine nucleotide-disulphide oxidoreductase
22262124272423167Ras family
21272025182222155Response regulator receiver domain
2101453227RNase H
49585865615759407RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
314Reverse transcriptase (RNA-dependent DNA polymerase)
12322212Copper/zinc superoxide dismutase (SODC)
222222214Iron/manganese superoxide dismutases, alpha-hairpin domain
71254119654Subtilase family
74702355789351444Sugar (and other) transporter
1013131212101080Thioredoxin
522211114Trypsin
444444327Tubulin/FtsZ family, GTPase domain
151441319von Willebrand factor type A domain
56685561546246402Zinc finger, C2H2 type
35544152733948342Zinc finger, C3HC4 type (RING finger)
16124385351Zinc knuckle
222222214Protein-tyrosine phosphatase
981329113317212498848short chain dehydrogenase
52693760756849410Zinc-binding dehydrogenase
974667645Thiolase, N-terminal domain
10281210291413116Beta-ketoacyl synthase, N-terminal domain
4644646342Fe-2S iron-sulfur cluster binding domain
11Papain family cysteine protease
11212119Enolase, C-terminal TIM barrel domain
11Cytochrome C and Quinol oxidase polypeptide I
7881088857Glutamine amidotransferase class-I
1010101010101070TCP-1/cpn60 chaperonin family
334242220Glutamine synthetase, catalytic domain
221222213Triosephosphate isomerase
1319111013131291E1-E2 ATPase
51177762871Core histone H2A/H2B/H3/H4
11Copper binding proteins, plastocyanin/azurin family
666119131263Alpha amylase, catalytic domain
213322215Phorbol esters/diacylglycerol binding domain (C1 domain)
689759953Bacterial transferase hexapeptide (six repeats)
733446532tRNA synthetases class I (I, L, M and V)
597667646Cyclin, N-terminal domain
24291617281716147Carboxylesterase family
444444428DNA polymerase family B
344445428ATP synthase subunit C
11Legume lectin domain
783454334Peroxidase
877101910667Beta-lactamase
223321316C-5 cytosine-specific DNA methylase
23283327312720189Calcineurin-like phosphoesterase
10958164557Cellulase (glycosyl hydrolase family 5)
7787107753tRNA synthetases class II (D, K and N)
36413838374038268Mitochondrial carrier protein
11recA bacterial DNA recombination protein
717141515131596Aminotransferase class I and II
6889891058Phosphoribosyl transferase domain
1113121211121283Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11111117Phosphoglycerate kinase
222121111Ribosomal protein S4/S9 N-terminal domain
222212213Ribosomal protein S12/S23
21115Bacterial regulatory helix-turn-helix proteins, AraC family
11111117Chaperonin 10 Kd subunit
1112101411131384C2 domain
16221918171717126PH domain
696988854bZIP transcription factor
20271122201815133Aldehyde dehydrogenase family
7919210915291104123850Fungal Zn(2)-Cys(6) binuclear cluster domain
18241926202423154Cytochrome b5-like Heme/Steroid binding domain
342735529Oxidoreductase molybdopterin binding domain
918111912121495Oxidoreductase NAD-binding domain
21252523272622169SNF2 family N-terminal domain
222222214Ribosomal protein S7p/S5e
21222126252423162Ubiquitin-conjugating enzyme
776869851Isocitrate/isopropylmalate dehydrogenase
222222214Ribosomal Proteins L2, RNA binding domain
11111117Hsp90 protein
122222213Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111117Dihydrofolate reductase
910224128Chitin recognition protein
312334521Cysteine-rich secretory protein family
21111118Ribosomal protein S3, C-terminal domain
343376329Cupin
122222213Annexin
1111228Eukaryotic-type carbonic anhydrase
11114Chalcone and stilbene synthases, N-terminal domain
2433333212-oxoacid dehydrogenases acyltransferase (catalytic domain)
443663430Catalase
11111117Disintegrin
6104979853Aminotransferase class-III
122222213Ribosomal protein S19
11111117DNA gyrase B
463894539Thiamine pyrophosphate enzyme, central domain
444445328Lyase
122222213Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1113Sodium:neurotransmitter symporter family
1111116Adenylate and Guanylate cyclase catalytic domain
1111116ATP synthase delta (OSCP) subunit
11111117Orotidine 5'-phosphate decarboxylase / HUMPS family
11111117Indole-3-glycerol phosphate synthase
11Neurohypophysial hormones, N-terminal Domain
12115Aromatic amino acid lyase
11111117Pyruvate kinase, barrel domain
1011101013111075Kinesin motor domain
30292626382828205DnaJ domain
1214141414141496Proteasome subunit
77411510953Major intrinsic protein
11111117ATP synthase
23123213Glycosyl hydrolase family 1
11111163'5'-cyclic nucleotide phosphodiesterase
1211117Profilin
21111118Ribosomal protein L22p/L17e
222222214Ribosomal protein L14p/L23e
1011111616101084Ubiquitin family
254442425Cofilin/tropomyosin-type actin-binding protein
32322221614-3-3 protein
564353430Alkaline phosphatase
1081333331Zinc carboxypeptidase
22251828352221171Aldo/keto reductase family
1115111517121697Myb-like DNA-binding domain
243556429Forkhead domain
231214316Glycosyl hydrolases family 32 N-terminal domain
11111117Ribosomal protein L16p/L10e
13221211Ribosomal protein S14p/S29e
554444430FKBP-type peptidyl-prolyl cis-trans isomerase
11111117Glutathione peroxidase
111232212
696878650Flavodoxin
112Protamine P1
1111116Calreticulin family
812781371166Common central domain of tyrosinase
389994951Aminotransferase class-V
11111117Ribonucleotide reductase, small chain
44394239384640288DEAD/DEAH box helicase
65777673767273512Helicase conserved C-terminal domain
11111117EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
222222214Ribosomal protein L23
1111217Pyridoxal-dependent decarboxylase, C-terminal sheet domain
221212212Ribosomal protein L5
666577542Pyridoxal-dependent decarboxylase conserved domain
232323217Citrate synthase, C-terminal domain
555555535GHMP kinases N terminal domain
776766746Biotin carboxylase, N-terminal domain
11111117Tryptophan synthase alpha chain
81491011111174Pyridoxal-phosphate dependent enzyme
1116121418151399NUDIX domain
555445634pfkB family carbohydrate kinase
65472529Glycosyl hydrolases family 28
111227Luciferase-like monooxygenase
322222215Ribosomal protein L3
122221212Ribosomal protein L11, RNA binding domain
1015151515111495Histidine phosphatase superfamily (branch 1)
11111117Thymidylate synthase
1111116Lipoxygenase
444444428ATP synthase alpha/beta chain, C terminal domain
555545534Calponin homology (CH) domain
676644437Glutamine amidotransferases class-II
132222214Ribosomal protein S15
11111117Thaumatin family
221121110Fructose-1-6-bisphosphatase, N-terminal domain
11111117Ribonucleotide reductase, all-alpha domain
232222215Ribosomal protein S2
222223316SRF-type transcription factor (DNA-binding and dimerisation domain)
577738845GATA zinc finger
22392435543338245Amino acid permease
283332526Prolyl oligopeptidase family
232121112Ribosomal protein L30p/L7e
612910117964Histidine phosphatase superfamily (branch 2)
11111117Respiratory-chain NADH dehydrogenase, 30 Kd subunit
444545430Aconitase family (aconitate hydratase)
5513216Glycosyl hydrolase family 10
124651625Glycosyl hydrolases family 17
222222214Ribosomal protein S5, N-terminal domain
11111117Nucleoside diphosphate kinase
112Tetraspanin family
21111219Ribosomal protein S10p/S20e
343242220Arrestin (or S-antigen), N-terminal domain
11111117Phosphoglucose isomerase
11111117Carbohydrate phosphorylase
11111117SecY translocase
11111117Respiratory-chain NADH dehydrogenase, 49 Kd subunit
222222214Ribosomal protein L6
584335432Polyprenyl synthetase
543453327Hexokinase
478576643Dynamin family
11111218Transcription factor TFIID (or TATA-binding protein, TBP)
453745533Rieske [2Fe-2S] domain
77Proton-conducting membrane transporter
6118988959Biotin-requiring enzyme
11111117Phosphofructokinase
221222213Ribosomal protein S17
11111117Hydroxymethylglutaryl-coenzyme A reductase
333434424FGGY family of carbohydrate kinases, N-terminal domain
1113Sodium:dicarboxylate symporter family
812152211161397Enoyl-CoA hydratase/isomerase
222222214Ribosomal protein S9/S16
222222214Transcription factor TFIIB repeat
567788849Cytidine and deoxycytidylate deaminase zinc-binding region
21111118Molybdopterin oxidoreductase
455562532Chromo (CHRromatin Organisation MOdifier) domain
232323318Phosphatidylinositol-specific phospholipase C, Y domain
332525525Phosphatidylinositol-specific phospholipase C, X domain
9971096858D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
122222213Malic enzyme, N-terminal domain
1222221126-phosphogluconate dehydrogenase, C-terminal domain
5121013208876Multicopper oxidase
91178109862WW domain
11111117Ribosomal RNA adenine dimethylase
12263519Yeast PIR protein repeat
97127115106107104102758WD domain, G-beta repeat
643343427Heavy-metal-associated domain
443432323Adenylate kinase
321222113Phosphoglucomutase/phosphomannomutase, C-terminal domain
221211110Ribosomal protein S8
11112118Ribosomal protein S11
344434527LIM domain
112Matrixin
11211219Regulator of chromosome condensation (RCC1) repeat
322212214Ribosomal protein S13/S18
22NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
222222214chorismate binding enzyme
44344332560s Acidic ribosomal protein
444444428Prenyltransferase and squalene oxidase repeat
566764741Protein kinase C terminal domain
1111116Single-strand binding protein family
11111117S-adenosylmethionine synthetase, N-terminal domain
676886748Bromodomain
1415111615151197Acyl-CoA dehydrogenase, C-terminal domain
15141415151517105Ubiquitin carboxyl-terminal hydrolase
11114Ribosomal protein L36
233222216Ribonuclease T2 family
243333321HSF-type DNA-binding
222222214SRP54-type protein, GTPase domain
11111117Urease alpha-subunit, N-terminal domain
913101416131186Serine carboxypeptidase
788888855Phosphatidylinositol 3- and 4-kinase
221232214Transketolase, thiamine diphosphate binding domain
45241117Glycosyl hydrolases family 11
552444428Inositol monophosphatase family
144442423Glutaredoxin
233352321Isocitrate lyase family
222222214Serine hydroxymethyltransferase
362354225Iron-containing alcohol dehydrogenase
122222213Ribosomal protein L10
533336225KOW motif
111115Ribosomal protein L34
11Negative factor, (F-Protein) or Nef
123322316RF-1 domain
131472321Sodium:solute symporter family
11111117Imidazoleglycerol-phosphate dehydratase
11111117DNA polymerase family A
11111117IMP dehydrogenase / GMP reductase domain
11111117Glucose-6-phosphate dehydrogenase, NAD binding domain
686666543Protein phosphatase 2C
232232216Nucleotidyl transferase
123352218Carbonic anhydrase
2111218Phosphoribulokinase / Uridine kinase family
676456640Fatty acid desaturase
666666642MutS domain V
11111117Delta-aminolevulinic acid dehydratase
451454427Arginase family
676666643MCM P-loop domain
222322215Squalene/phytoene synthase
789865851FHA domain
11NADH-ubiquinone/plastoquinone oxidoreductase chain 6
34575164495148354AMP-binding enzyme
343344324G-protein alpha subunit
7767107751HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
16221722161818129His Kinase A (phospho-acceptor) domain
132233216Armadillo/beta-catenin-like repeat
23312921312323181Tetratricopeptide repeat
223334320Ion transport protein
11111117DNA gyrase/topoisomerase IV, subunit A
10118101110868BRCA1 C Terminus (BRCT) domain
3657104742Glycosyl transferases group 1
454544733Glycosyl transferase family 2
631114117SAM domain (Sterile alpha motif)
11111117linker histone H1 and H5 family
12111118Ribosomal protein L7/L12 C-terminal domain
751112219Pectate lyase
122121110ribonuclease
1111116Urease, gamma subunit
354444428CoA-ligase
8291818251522135Phosphopantetheine attachment site
333534425Formyl transferase
5969118856Metallopeptidase family M24
13181512171614105Leucine Rich Repeat
22423146532333250alpha/beta hydrolase fold
333333321RNA polymerase Rpb2, domain 6
333333321PB1 domain
222212213Staphylococcal nuclease homologue
1212111111111179Rab-GTPase-TBC domain
11111117Tudor domain
11111117WH1 domain
335533325Zinc finger, ZZ type
331121112HRDC domain
8810101091166CBS domain
222222214Ribosomal protein L13
222222214Ribosomal protein L4/L1 family
11111117Clp protease
244333423S1 RNA binding domain
111115HIUase/Transthyretin family
663556435AhpC/TSA family
444445429tRNA synthetases class I (W and Y)
11112118UvrD/REP helicase N-terminal domain
446655535Rhodanese-like domain
122212212Universal stress protein family
21452431522430227Acetyltransferase (GNAT) family
11111117SecE/Sec61-gamma subunits of protein translocation complex
11111117C-terminal regulatory domain of Threonine dehydratase
232222215AIR synthase related protein, N-terminal domain
898777753tRNA synthetase class II core domain (G, H, P, S and T)
222222214SpoU rRNA Methylase family
222222214Tetrapyrrole (Corrin/Porphyrin) Methylases
11111117Glycosyl transferase family, a/b domain
11121219PDZ domain
582775539Class II Aldolase and Adducin N-terminal domain
444342324Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
555554534Fes/CIP4, and EFC/F-BAR homology domain
664564435IQ calmodulin-binding motif
222222214Phosphoinositide 3-kinase family, accessory domain (PIK domain)
563554533Phospholipase D Active site motif
11111117Regulator of G protein signaling domain
233333320GTPase-activator protein for Ras-like GTPase
344444427RasGEF domain
244442424RasGEF N-terminal motif
11Caspase recruitment domain
798886854RhoGAP domain
666674641RhoGEF domain
222442218SPRY domain
333333321RNA polymerase Rpb1, domain 2
11111117Guanylate kinase
333334423Gelsolin repeat
881012961164UBA/TS-N domain
17171824161320125PHD-finger
111115GGL domain
456654636HECT-domain (ubiquitin-transferase)
222232215Helix-hairpin-helix motif
11111117MSP (Major sperm protein) domain
3105544536Ribonuclease III domain
122121211Region in Clathrin and VPS
222221213RanBP1 domain
222222214PPIC-type PPIASE domain
11221119Zn-finger in Ran binding protein and others
18171417201317116Zinc finger C-x8-C-x5-C-x3-H type (and similar)
122311212Poly(ADP-ribose) polymerase catalytic domain
211116Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
506959561147743468F-box domain
11111117Elongation factor 1 gamma, conserved domain
232132114Calpain family cysteine protease
212221212Copper fist DNA binding domain
555554534CRAL/TRIO domain
21913173241198BTB/POZ domain
11215Ricin-type beta-trefoil lectin domain
11111117Inhibitor of Apoptosis domain
333444425Voltage gated chloride channel
132221213Caspase domain
11968133656GDSL-like Lipase/Acylhydrolase
11111117Poly-adenylate binding protein, unique domain
111115POLO box duplicated region
11NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
19202016241915133ABC transporter transmembrane region
112Integrase core domain
494765540FAD binding domain
511108981162Condensation domain
11111117S-adenosyl-L-homocysteine hydrolase, NAD binding domain
1111116HAMP domain
222222214ribosomal L5P family C-terminus
556655436Insulinase (Peptidase family M16)
333333321Dehydrogenase E1 component
11111117Lumazine binding domain
466665639Elongation factor G C-terminus
444746635HMGL-like
244434425DnaJ central domain
222414419Starch binding domain
232222316Ribosomal protein L1p/L10e family
8105568749Cation transporting ATPase, C-terminus
9115588753Cation transporter/ATPase, N-terminus
12222110dUTPase
344445428Aconitase C-terminal domain
123343319Amino acid kinase family
11111117N-(5'phosphoribosyl)anthranilate (PRA) isomerase
926108321312110Acyl transferase domain
11111117Urease beta subunit
571363227Dihydrodipicolinate synthetase family
29382926323030214haloacid dehalogenase-like hydrolase
781447334Glycosyl hydrolases family 2
71616999571Glycosyl hydrolases family 18
1111116Proliferating cell nuclear antigen, N-terminal domain
1111116Acylphosphatase
11111117Adenylosuccinate synthetase
3111219Asparaginase, N-terminal
113332316Peptidase S24-like
11111117Inorganic pyrophosphatase
109681081061Glycosyl hydrolases family 16
22231313Glycosyl hydrolases family 15
7559710649NADH:flavin oxidoreductase / NADH oxidase family
2323242183-hydroxyacyl-CoA dehydrogenase, C-terminal domain
341151217Glycosyl hydrolase family 20, catalytic domain
345444327HhH-GPD superfamily base excision DNA repair protein
11111117AIR carboxylase
1929822291818143GMC oxidoreductase
244321218Asparagine synthase
911110132Fungal cellulose binding domain
565565537Septin
21111118EF-1 guanine nucleotide exchange domain
11111117Homoserine dehydrogenase
13116Flavin-binding monooxygenase-like
133343320tRNA synthetases class I (E and Q), catalytic domain
221131111tRNA synthetases class I (R)
444433426XPG N-terminal domain
81313171381587Metallo-beta-lactamase superfamily
111115F5/8 type C domain
122222213Choline/Carnitine o-acyltransferase
11111117Putative esterase
11111117Ferrochelatase
222222214Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
12111118Arginosuccinate synthase
11111117Electron transfer flavoprotein FAD-binding domain
333332320RNB domain
572463835Dioxygenase
232332217CNH domain
111221210Diacylglycerol kinase catalytic domain
4889106853Dual specificity phosphatase, catalytic domain
6511
232231215P21-Rho-binding domain
1113131112111283PX domain
232222215Ras association (RalGDS/AF-6) domain
575564537UBX domain
444434427VHS domain
11111117Phosphoinositide 3-kinase C2
222222214DAHP synthetase I family
813611139969Carbon-nitrogen hydrolase
11322211N-acetyltransferase
11111117Prephenate dehydratase
554453430Syntaxin
11Pentapeptide repeats (8 copies)
355555533Pumilio-family RNA binding repeat
576675541Histone-like transcription factor (CBF/NF-Y) and archaeal histone
11111117Pterin binding enzyme
222222214ER lumen protein retaining receptor
222222214Glycoprotease family
12111118Histidinol dehydrogenase
344445428impB/mucB/samB family
11111117
11111117Ribosomal L15
11111117Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
11111117Ribosomal L28 family
11111117Ribosomal L29 protein
1111116Ribosomal L39 protein
12111118Ribosomal S17
12111118Ribulose-phosphate 3 epimerase family
11111117Translationally controlled tumour protein
5614117Glycosyl hydrolase family 7
11111117RNA pseudouridylate synthase
444444428Histone deacetylase domain
582355432POT family
11111117PWWP domain
8171316241013101SET domain
6125101691068Isochorismatase family
351143421Permease family
11111117Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
555635534XPG I-region
1111116Acetokinase family
434424425DNA photolyase
11NlpC/P60 family
11Cation-independent mannose-6-phosphate receptor repeat
213Nitroreductase family
222654324Sulfatase
111111176,7-dimethyl-8-ribityllumazine synthase
1111116Ribosomal protein S16
122221212Acyl CoA binding protein
243443424Cullin family
2136131531264FAD binding domain
81257253565O-methyltransferase domain
26