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PFAM Domains • Penicillium chrysogenum Wisconsin 54-1255
Annotations/GenomesPenbi1Penbr2Penca1Pench1PenchWisc1_1Pendi1Penex1Penfe1Pengl1Penla1Penra1TotalAnnotation Description
PFAMs
10,3879,72410,2249,1409,6577,2979,9629,72810,1659,0979,464104,845
4742444044404444424047474ATPase family associated with various cellular activities (AAA)
5754645454467246645160622ABC transporter
9444444434448ATP synthase alpha/beta family, nucleotide-binding domain
213EGF-like domain
1314141414131413141314150Elongation factor Tu GTP binding domain
121111101091211101010116Helix-loop-helix DNA-binding domain
4245534334441Hsp20/alpha crystallin family
7777777866776Hsp70 protein
8878788788885KH domain
1111116Ribulose bisphosphate carboxylase large chain, catalytic domain
1111111111111SH2 domain
2223232323222323242324253SH3 domain
1010910101010109810106Actin
998211159121319561774553834Ankyrin repeat
1311135116PAN domain
10788877888786ADP-ribosylation factor family
148889691212710103Eukaryotic aspartyl protease
4444444444444Cyclic nucleotide-binding domain
22Cytochrome b(C-terminal)/b6/petD
1113Cytochrome b/b6/petB
1111111111111Cytochrome c
1112111211113Double-stranded RNA binding motif
1520151617161519161618183EF hand
1111221111124Fe-4S binding domain
3322211212221Fibronectin type III domain
3213311213121Globin
1815161413132023201215179Glutathione S-transferase, C-terminal domain
2221112222219Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
211122110Hemopexin
7777757977878Homeodomain
2334322343231lactate/malate dehydrogenase, NAD binding domain
1113Low-density lipoprotein receptor repeat class B
5444554355448Myosin head (motor domain)
1219012510498471231111411081071,175Cytochrome P450
1131331151451451061131061021051141,297Protein kinase domain
2117171516121926271920209Pyridine nucleotide-disulphide oxidoreductase
2223252327222424232122256Ras family
2228251719141916261829233Response regulator receiver domain
723510233221159RNase H
6564636566616364656365704RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
112530461Reverse transcriptase (RNA-dependent DNA polymerase)
3223322223226Copper/zinc superoxide dismutase (SODC)
3222222222223Iron/manganese superoxide dismutases, alpha-hairpin domain
4555428363348Subtilase family
165131159112112591141431461121051,358Sugar (and other) transporter
1411111111101012131212127Thioredoxin
1231121132118Trypsin
4744544444347Tubulin/FtsZ family, GTPase domain
2344321221226von Willebrand factor type A domain
9080867591468879887076869Zinc finger, C2H2 type
4344413952293646483942459Zinc finger, C3HC4 type (RING finger)
933817153442270Zinc knuckle
3222233222225Protein-tyrosine phosphatase
156136170117119681581841741251421,549short chain dehydrogenase
106951017977471091041077582982Zinc-binding dehydrogenase
6666667775668Thiolase, N-terminal domain
2530362527203917283240319Beta-ketoacyl synthase, N-terminal domain
44455444545482Fe-2S iron-sulfur cluster binding domain
11Papain family cysteine protease
1111112121113Enolase, C-terminal TIM barrel domain
11Cytochrome C and Quinol oxidase polypeptide I
11Cytochrome C oxidase subunit II, periplasmic domain
91010111099981211108Glutamine amidotransferase class-I
10101010111091091010109TCP-1/cpn60 chaperonin family
11ATP synthase A chain
4553323487448Glutamine synthetase, catalytic domain
2222222222222Triosephosphate isomerase
2122222027161819131917214E1-E2 ATPase
77777777107780Core histone H2A/H2B/H3/H4
161717161611147141513156Alpha amylase, catalytic domain
2322222333226Phorbol esters/diacylglycerol binding domain (C1 domain)
101081114101289128112Bacterial transferase hexapeptide (six repeats)
3333343333334tRNA synthetases class I (I, L, M and V)
7877977867780Cyclin, N-terminal domain
3325322122123634441820297Carboxylesterase family
4444444444444DNA polymerase family B
4455646443449ATP synthase subunit C
5333334323436Peroxidase
141818121171317131510148Beta-lactamase
2222222132222C-5 cytosine-specific DNA methylase
11NADH dehydrogenase
3732313132293428353032351Calcineurin-like phosphoesterase
913151111711771013114Cellulase (glycosyl hydrolase family 5)
7777887778881tRNA synthetases class II (D, K and N)
4046434242373842404042452Mitochondrial carrier protein
112recA bacterial DNA recombination protein
3328302523182925303424299Aminotransferase class I and II
97799897107890Phosphoribosyl transferase domain
131211111111910121012122Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111111111111Phosphoglycerate kinase
2221111221116Ribosomal protein S4/S9 N-terminal domain
2222222222222Ribosomal protein S12/S23
1122212111115Bacterial regulatory helix-turn-helix proteins, AraC family
1131111111113Chaperonin 10 Kd subunit
1212121111121110101211124C2 domain
1715141516161616161714172PH domain
1113119139715121011121bZIP transcription factor
3826313736263842333526368Aldehyde dehydrogenase family
445337441309330934074664013493583,936Fungal Zn(2)-Cys(6) binuclear cluster domain
3329302729223127342829319Cytochrome b5-like Heme/Steroid binding domain
4442313323231Oxidoreductase molybdopterin binding domain
2117171920132216152318201Oxidoreductase NAD-binding domain
2323242525242922242324266SNF2 family N-terminal domain
2222212222221Ribosomal protein S7p/S5e
2020202020202020211922222Ubiquitin-conjugating enzyme
781088699108891Isocitrate/isopropylmalate dehydrogenase
1222222222221Ribosomal Proteins L2, RNA binding domain
1111111111111Hsp90 protein
2222222322223Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111111111111Dihydrofolate reductase
6431115123330Chitin recognition protein
3222222242225Cysteine-rich secretory protein family
111111111110Ribosomal protein S3, C-terminal domain
3452214323433Cupin
2232222233225Annexin
11114Eukaryotic-type carbonic anhydrase
11111112110Chalcone and stilbene synthases, N-terminal domain
34433344333372-oxoacid dehydrogenases acyltransferase (catalytic domain)
9598948484775Catalase
1111111111111Disintegrin
2211221213UDP-glucoronosyl and UDP-glucosyl transferase
1089986111110910101Aminotransferase class-III
2222222211220Ribosomal protein S19
1111111111111DNA gyrase B
891099811798795Thiamine pyrophosphate enzyme, central domain
5433355543343Lyase
2222222222222Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
11111117Sodium:neurotransmitter symporter family
11215Ferritin-like domain
1111111111111Adenylate and Guanylate cyclase catalytic domain
1111111111111ATP synthase delta (OSCP) subunit
1111111111111Orotidine 5'-phosphate decarboxylase / HUMPS family
1111111111111Indole-3-glycerol phosphate synthase
218112231223Aromatic amino acid lyase
1111111111111Pyruvate kinase, barrel domain
111211111210111091112120Kinesin motor domain
2627282727272627262727295DnaJ domain
1414141413141413141414152Proteasome subunit
7866646476767Major intrinsic protein
1111111111111ATP synthase
4463336343342Glycosyl hydrolase family 1
11111111111113'5'-cyclic nucleotide phosphodiesterase
1222223213222Profilin
1111121112113Ribosomal protein L22p/L17e
2222222222222Ribosomal protein L14p/L23e
979910108889996Ubiquitin family
5467767456562Cofilin/tropomyosin-type actin-binding protein
222222223222314-3-3 protein
2344433234335Alkaline phosphatase
1112211111113Zinc carboxypeptidase
3941433434214552383434415Aldo/keto reductase family
1614161616151513141612163Myb-like DNA-binding domain
4444444444545Forkhead domain
84126834729568Glycosyl hydrolases family 32 N-terminal domain
1111111111111Ribosomal protein L16p/L10e
2222212222221Ribosomal protein S14p/S29e
4444444444444FKBP-type peptidyl-prolyl cis-trans isomerase
2111111121113Glutathione peroxidase
2222222222222
7786658897576Flavodoxin
1111111111111Calreticulin family
3665515465551Common central domain of tyrosinase
9101088611998997Aminotransferase class-V
1111111111111Ribonucleotide reductase, small chain
4239403941404036444039440DEAD/DEAH box helicase
7569737075747568747070793Helicase conserved C-terminal domain
2111111121214EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
2222222222222Ribosomal protein L23
2222323122223Pyridoxal-dependent decarboxylase, C-terminal sheet domain
1111111111111Ribosomal protein L5
9867677796779Pyridoxal-dependent decarboxylase conserved domain
2343333323332Citrate synthase, C-terminal domain
6565556565660GHMP kinases N terminal domain
7898848989886Biotin carboxylase, N-terminal domain
3432222223227Tryptophan synthase alpha chain
2317181717101415171614178Pyridoxal-phosphate dependent enzyme
11'Paired box' domain
1816152020111512161517175NUDIX domain
7798847868678pfkB family carbohydrate kinase
1512145589111757108Glycosyl hydrolases family 28
1111111211112Luciferase-like monooxygenase
2222222222222Ribosomal protein L3
2222222222222Ribosomal protein L11, RNA binding domain
1117161312111614161513154Histidine phosphatase superfamily (branch 1)
1111111111111Thymidylate synthase
121127Lipoxygenase
9444444434448ATP synthase alpha/beta chain, C terminal domain
5455545434549Calponin homology (CH) domain
4565545455553Glutamine amidotransferases class-II
1222222222221Ribosomal protein S15
1113'Cold-shock' DNA-binding domain
2111111121113Fructose-1-6-bisphosphatase, N-terminal domain
1111111111111Ribonucleotide reductase, all-alpha domain
2222222222222Ribosomal protein S2
6634842351951SRF-type transcription factor (DNA-binding and dimerisation domain)
7877977674877GATA zinc finger
8069656461417270666263713Amino acid permease
6633345333847Prolyl oligopeptidase family
2212222212220Ribosomal protein L30p/L7e
19111111971010161112127Histidine phosphatase superfamily (branch 2)
111111111110Respiratory-chain NADH dehydrogenase, 30 Kd subunit
4646643756455Aconitase family (aconitate hydratase)
3243313233330Glycosyl hydrolase family 10
4435454343443Glycosyl hydrolases family 17
1221111211114Ribosomal protein S5, N-terminal domain
1111111111111Nucleoside diphosphate kinase
1222121112Galactoside-binding lectin
2222222222222Ribosomal protein S10p/S20e
7855546446357Arrestin (or S-antigen), N-terminal domain
111111111110Phosphoglucose isomerase
1111111111111Carbohydrate phosphorylase
1111111111111SecY translocase
1111111111111Respiratory-chain NADH dehydrogenase, 49 Kd subunit
2222222222222Ribosomal protein L6
771075446108876Polyprenyl synthetase
6666756666666Hexokinase
11668669677880Dynamin family
1111111111111Transcription factor TFIID (or TATA-binding protein, TBP)
101111101089119910108Rieske [2Fe-2S] domain
1111111121112Phytochrome region
1416Proton-conducting membrane transporter
8101110969119109102Biotin-requiring enzyme
1111111111111Phosphofructokinase
1211111111213Ribosomal protein S17
3213312223123Hydroxymethylglutaryl-coenzyme A reductase
5855545544454FGGY family of carbohydrate kinases, N-terminal domain
11Hemocyanin, copper containing domain
11Prion/Doppel alpha-helical domain
161419141481415151416159Enoyl-CoA hydratase/isomerase
2222222222222Ribosomal protein S9/S16
2222222222222Transcription factor TFIIB repeat
899101068788891Cytidine and deoxycytidylate deaminase zinc-binding region
1112311111114Molybdopterin oxidoreductase
5545695444556Chromo (CHRromatin Organisation MOdifier) domain
2222222222222Phosphatidylinositol-specific phospholipase C, Y domain
2222222322223Phosphatidylinositol-specific phospholipase C, X domain
1212121010791610811117D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
1222222222221Malic enzyme, N-terminal domain
11PEP-utilising enzyme, mobile domain
22323222223256-phosphogluconate dehydrogenase, C-terminal domain
1513139105911151112123Multicopper oxidase
8899988989893WW domain
1112211111113Ribosomal RNA adenine dimethylase
1161331161141111041131181181061101,259WD domain, G-beta repeat
55551156645562Heavy-metal-associated domain
3333333333333Adenylate kinase
3222222232325Phosphoglucomutase/phosphomannomutase, C-terminal domain
2121122222219Ribosomal protein S8
1111111111111Ribosomal protein S11
4443423443439LIM domain
11Matrixin
3112111122116Regulator of chromosome condensation (RCC1) repeat
1222222232222Ribosomal protein S13/S18
11NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
4332222223328chorismate binding enzyme
332333333333260s Acidic ribosomal protein
5565645454756Prenyltransferase and squalene oxidase repeat
6776667666669Protein kinase C terminal domain
1111111111111Single-strand binding protein family
1111112111112S-adenosylmethionine synthetase, N-terminal domain
6978888658881Bromodomain
151414141571315151413149Acyl-CoA dehydrogenase, C-terminal domain
1414141514151416151514160Ubiquitin carboxyl-terminal hydrolase
1111111119Ribosomal protein L36
2222222232223Ribonuclease T2 family
11Gonadotropin-releasing hormone
3333533333335HSF-type DNA-binding
2222222122221SRP54-type protein, GTPase domain
131221112115Urease alpha-subunit, N-terminal domain
98810107111010910102Serine carboxypeptidase
7777776777776Phosphatidylinositol 3- and 4-kinase
4455523734345Transketolase, thiamine diphosphate binding domain
3111111322117Glycosyl hydrolases family 11
11WHEP-TRS domain
4444444444444Inositol monophosphatase family
5554444454549Glutaredoxin
65756451055462Isocitrate lyase family
2222222322223Serine hydroxymethyltransferase
3344423543439Iron-containing alcohol dehydrogenase
1222222112219Ribosomal protein L10
3453444345544KOW motif
11111117Ribosomal protein L34
2222222222222RF-1 domain
4543323743442Sodium:solute symporter family
1111111111111Imidazoleglycerol-phosphate dehydratase
111111111110DNA polymerase family A
2213212122119IMP dehydrogenase / GMP reductase domain
1111111111111Glucose-6-phosphate dehydrogenase, NAD binding domain
81077888777784Protein phosphatase 2C
2222222222222Nucleotidyl transferase
4323324552235Carbonic anhydrase
111111111110Phosphoribulokinase / Uridine kinase family
1012128878612910102Fatty acid desaturase
6566666566563MutS domain V
1111112112113Delta-aminolevulinic acid dehydratase
2644535445345Arginase family
5666666666665MCM P-loop domain
212111124217Squalene/phytoene synthase
11Bacterial extracellular solute-binding proteins, family 5 Middle
11Bacterial extracellular solute-binding proteins, family 3
91099998999898FHA domain
22NADH-ubiquinone/plastoquinone oxidoreductase chain 6
7373725858457053696974714AMP-binding enzyme
7333543333441G-protein alpha subunit
6966656586568HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
22Cytochrome c oxidase subunit III
1923211314111612231325190His Kinase A (phospho-acceptor) domain
3333333333333Armadillo/beta-catenin-like repeat
3332342736242525323333334Tetratricopeptide repeat
3121111131116Ion transport protein
1111111111111DNA gyrase/topoisomerase IV, subunit A
1212111111121113101111125BRCA1 C Terminus (BRCT) domain
111314101012129121210125Glycosyl transferases group 1
6444444474550Glycosyl transferase family 2
2111111211113SAM domain (Sterile alpha motif)
1111111111111linker histone H1 and H5 family
1111111111111Ribosomal protein L7/L12 C-terminal domain
3444434234338Pectate lyase
1211112211316ribonuclease
131221112115Urease, gamma subunit
5655555455555CoA-ligase
3241413131254615314247382Phosphopantetheine attachment site
3333333334334Formyl transferase
151113121291113111011128Metallopeptidase family M24
1411111312121314161214142Leucine Rich Repeat
5838463131243855562943449alpha/beta hydrolase fold
3333333332332RNA polymerase Rpb2, domain 6
4444434444443PB1 domain
2222222222222Staphylococcal nuclease homologue
1111111211121211111212126Rab-GTPase-TBC domain
1111111111111Tudor domain
1111111111111WH1 domain
2444445444443Zinc finger, ZZ type
2221122222220HRDC domain
121091088108111010106CBS domain
2222222122221Ribosomal protein