PFAM Domains • Multifurca ochricompacta BPL690 v1.0
Annotations/GenomesGlocon1Lacqui1Lacsub1Lacvol1Muloch1Rusbre1Ruscom1Rusdis1Rusrug1TotalAnnotation Description
PFAMs
9,26510,5908,5479,1118,3138,6937,9658,3028,53379,319
374043423837413938355ATPase family associated with various cellular activities (AAA)
404132323036314033315ABC transporter
410464444444ATP synthase alpha/beta family, nucleotide-binding domain
141726131416141717148Elongation factor Tu GTP binding domain
11131112911111111100Helix-loop-helix DNA-binding domain
94453465444Hsp20/alpha crystallin family
9148778872189Hsp70 protein
77986788767KH domain
141812131215141316127SH3 domain
11131638111111139133Actin
33389291941172538249Ankyrin repeat
79876777765ADP-ribosylation factor family
234725363121182234257Eukaryotic aspartyl protease
33433333328Cyclic nucleotide-binding domain
11111112110Cytochrome c
8121385858875Double-stranded RNA binding motif
24322233425EF hand
11Fibronectin type III domain
146445739557Glutathione S-transferase, C-terminal domain
11121111110Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
111191088810883Homeodomain
22222222218lactate/malate dehydrogenase, NAD binding domain
55565754446Myosin head (motor domain)
1861771131231241471121111661,259Cytochrome P450
1472031821751761981671831621,593Protein kinase domain
129109109108683Pyridine nucleotide-disulphide oxidoreductase
383730393540293243323Ras family
77869978869Response regulator receiver domain
3351114821047RNase H
656865636966616658581RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
1121117Copper/zinc superoxide dismutase (SODC)
22223222219Iron/manganese superoxide dismutases, alpha-hairpin domain
171959123011789298Subtilase family
302718222825192127217Sugar (and other) transporter
131711131210111112110Thioredoxin
78677656658Tubulin/FtsZ family, GTPase domain
172334231423203223209Zinc finger, C2H2 type
697765771165Zinc finger, C3HC4 type (RING finger)
96786779867Zinc knuckle
22222222218Protein-tyrosine phosphatase
1184337445852373645470short chain dehydrogenase
341818201718151614170Zinc-binding dehydrogenase
56545545645Thiolase, N-terminal domain
22222222117Beta-ketoacyl synthase, N-terminal domain
1111111182Fe-2S iron-sulfur cluster binding domain
13111111111Enolase, C-terminal TIM barrel domain
98999798876Glutamine amidotransferase class-I
101310111010101912105TCP-1/cpn60 chaperonin family
36444333434Glutamine synthetase, catalytic domain
1111111119Triosephosphate isomerase
163021211818182117180E1-E2 ATPase
142414151913151315142Core histone H2A/H2B/H3/H4
411118Copper binding proteins, plastocyanin/azurin family
67784779661Alpha amylase, catalytic domain
44455944443Phorbol esters/diacylglycerol binding domain (C1 domain)
44343444333Bacterial transferase hexapeptide (six repeats)
45444654440tRNA synthetases class I (I, L, M and V)
1010101291699994Cyclin, N-terminal domain
223314241411111216157Carboxylesterase family
44444444436DNA polymerase family B
37332233228ATP synthase subunit C
112424322434Peroxidase
42621612428Beta-lactamase
55543345438C-5 cytosine-specific DNA methylase
262323192323213020208Calcineurin-like phosphoesterase
19101211111191211106Cellulase (glycosyl hydrolase family 5)
55555555545tRNA synthetases class II (D, K and N)
404136363531333332317Mitochondrial carrier protein
11recA bacterial DNA recombination protein
121913121412121212118Aminotransferase class I and II
43444544335Phosphoribosyl transferase domain
141416131317131512127Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111111119Phosphoglycerate kinase
22222222218Ribosomal protein S4/S9 N-terminal domain
22222222218Ribosomal protein S12/S23
11Bacterial regulatory helix-turn-helix proteins, AraC family
111101111219Chaperonin 10 Kd subunit
121412131213101515116C2 domain
10911109101391091PH domain
912111010911111194bZIP transcription factor
181416212116161612150Aldehyde dehydrogenase family
454447433944424239385Fungal Zn(2)-Cys(6) binuclear cluster domain
231815211921161820171Cytochrome b5-like Heme/Steroid binding domain
57645554546Oxidoreductase NAD-binding domain
202520212021212023191SNF2 family N-terminal domain
23223223221Ribosomal protein S7p/S5e
202323192118232021188Ubiquitin-conjugating enzyme
56667555550Isocitrate/isopropylmalate dehydrogenase
23222222219Ribosomal Proteins L2, RNA binding domain
22222522221Hsp90 protein
13223222219Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111116Dihydrofolate reductase
11Chitin recognition protein
12311122114Cysteine-rich secretory protein family
1111111119Ribosomal protein S3, C-terminal domain
1111116Cupin
333533343302-oxoacid dehydrogenases acyltransferase (catalytic domain)
31222225221Catalase
1111111119Disintegrin
23333322324UDP-glucoronosyl and UDP-glucosyl transferase
561274656556Aminotransferase class-III
2222212215Ribosomal protein S19
112111119DNA gyrase B
22432525328Thiamine pyrophosphate enzyme, central domain
33333333327Lyase
1111119116Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
12111111110Adenylate and Guanylate cyclase catalytic domain
1111111119ATP synthase delta (OSCP) subunit
1111111119Orotidine 5'-phosphate decarboxylase / HUMPS family
1111111119Indole-3-glycerol phosphate synthase
22232222219Aromatic amino acid lyase
1111111119Pyruvate kinase, barrel domain
99109910109883Kinesin motor domain
293030302929312829265DnaJ domain
141514221514141514137Proteasome subunit
47864535850Major intrinsic protein
111111118ATP synthase
22Glycosyl hydrolase family 1
11111111193'5'-cyclic nucleotide phosphodiesterase
1111111119Profilin
22222222218Ribosomal protein L22p/L17e
22222322219Ribosomal protein L14p/L23e
161818191516151717151Ubiquitin family
46555455544Cofilin/tropomyosin-type actin-binding protein
2223222462514-3-3 protein
12111111110Zinc carboxypeptidase
332924233222201924226Aldo/keto reductase family
1512776577773Myb-like DNA-binding domain
45555555544Forkhead domain
24223222221Ribosomal protein L16p/L10e
22223222118Ribosomal protein S14p/S29e
43434444434FKBP-type peptidyl-prolyl cis-trans isomerase
36442433332Flavodoxin
1111111119Calreticulin family
51361036671268Common central domain of tyrosinase
86867576659Aminotransferase class-V
21221222216Ribonucleotide reductase, small chain
636347484854575854492DEAD/DEAH box helicase
839170717075807573688Helicase conserved C-terminal domain
12131111112EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22232222219Ribosomal protein L23
11111218Pyridoxal-dependent decarboxylase, C-terminal sheet domain
111121119Ribosomal protein L5
75544546646Pyridoxal-dependent decarboxylase conserved domain
43444544436Citrate synthase, C-terminal domain
66545454443GHMP kinases N terminal domain
56555465546Biotin carboxylase, N-terminal domain
1111111119Tryptophan synthase alpha chain
888117666767Pyridoxal-phosphate dependent enzyme
141514181214131413127NUDIX domain
34445455741pfkB family carbohydrate kinase
22Glycosyl hydrolases family 28
22222222218Ribosomal protein L3
22323222220Ribosomal protein L11, RNA binding domain
797977710669Histidine phosphatase superfamily (branch 1)
121111119Thymidylate synthase
45443444436ATP synthase alpha/beta chain, C terminal domain
45444754340Calponin homology (CH) domain
31322222118Glutamine amidotransferases class-II
21243212219Ribosomal protein S15
339222112153Thaumatin family
1111111119Fructose-1-6-bisphosphatase, N-terminal domain
11121111110Ribonucleotide reductase, all-alpha domain
22332222220Ribosomal protein S2
22223222320SRF-type transcription factor (DNA-binding and dimerisation domain)
131315181111121411118GATA zinc finger
68566557553Amino acid permease
791666538363Prolyl oligopeptidase family
12222222217Ribosomal protein L30p/L7e
97758977564Histidine phosphatase superfamily (branch 2)
1111111119Respiratory-chain NADH dehydrogenase, 30 Kd subunit
44464544439Aconitase family (aconitate hydratase)
66Glycosyl hydrolase family 10
111111118Glycosyl hydrolases family 17
21222222217Ribosomal protein S5, N-terminal domain
22222222117Nucleoside diphosphate kinase
32323332324Tetraspanin family
22522223222Ribosomal protein S10p/S20e
32442434531Arrestin (or S-antigen), N-terminal domain
11111111210Phosphoglucose isomerase
1111111119Carbohydrate phosphorylase
12311111213SecY translocase
11611111114Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222222218Ribosomal protein L6
47574454444Polyprenyl synthetase
22222222319Hexokinase
791110710612779Dynamin family
11111311111Transcription factor TFIID (or TATA-binding protein, TBP)
43222222221Rieske [2Fe-2S] domain
1113Phytochrome region
77786767762Biotin-requiring enzyme
111111118Phosphofructokinase
22222222218Ribosomal protein S17
1111111119Hydroxymethylglutaryl-coenzyme A reductase
35333333733FGGY family of carbohydrate kinases, N-terminal domain
812777666968Enoyl-CoA hydratase/isomerase
22232222320Ribosomal protein S9/S16
22222322320Transcription factor TFIIB repeat
77788556659Cytidine and deoxycytidylate deaminase zinc-binding region
1111111119Molybdopterin oxidoreductase
68755666554Chromo (CHRromatin Organisation MOdifier) domain
1111111119Phosphatidylinositol-specific phospholipase C, Y domain
21111111211Phosphatidylinositol-specific phospholipase C, X domain
94333333233D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
34333333328Malic enzyme, N-terminal domain
1111111186-phosphogluconate dehydrogenase, C-terminal domain
9201429131591317139Multicopper oxidase
687288118121098WW domain
22222222218Ribosomal RNA adenine dimethylase
1281211121281101191071111111,047WD domain, G-beta repeat
49564856552Heavy-metal-associated domain
35673243336Adenylate kinase
22222222218Phosphoglucomutase/phosphomannomutase, C-terminal domain
22222222218Ribosomal protein S8
22222222218Ribosomal protein S11
610665868661LIM domain
43343434432Regulator of chromosome condensation (RCC1) repeat
22222222218Ribosomal protein S13/S18
22222222218chorismate binding enzyme
2333333342760s Acidic ribosomal protein
43464434537Prenyltransferase and squalene oxidase repeat
56565676551Protein kinase C terminal domain
111111118Single-strand binding protein family
111111118S-adenosylmethionine synthetase, N-terminal domain
10111010101110101597Bromodomain
1010778978672Acyl-CoA dehydrogenase, C-terminal domain
142016151314181568193Ubiquitin carboxyl-terminal hydrolase
111111118Ribosomal protein L36
22215313120Ribonuclease T2 family
34444544436HSF-type DNA-binding
22222222218SRP54-type protein, GTPase domain
11112111110Urease alpha-subunit, N-terminal domain
16178161098719110Serine carboxypeptidase
888871088873Phosphatidylinositol 3- and 4-kinase
32422232222Transketolase, thiamine diphosphate binding domain
11Glycosyl hydrolases family 11
322122542335Inositol monophosphatase family
510575565553Glutaredoxin
22222222218Isocitrate lyase family
11111113111Serine hydroxymethyltransferase
22222323321Iron-containing alcohol dehydrogenase
22222122217Ribosomal protein L10
57564655548KOW motif
111111118Ribosomal protein L34
111111118Ribosomal protein L33
33334333328RF-1 domain
11111211110Sodium:solute symporter family
11211111110Imidazoleglycerol-phosphate dehydratase
111211119DNA polymerase family A
1111111119IMP dehydrogenase / GMP reductase domain
1111111119Glucose-6-phosphate dehydrogenase, NAD binding domain
78787767764Protein phosphatase 2C
32343333226Nucleotidyl transferase
42144122121Carbonic anhydrase
1111111119Phosphoribulokinase / Uridine kinase family
105595767761Fatty acid desaturase
67675866657MutS domain V
1111111119Delta-aminolevulinic acid dehydratase
33532343430Arginase family
666861366663MCM P-loop domain
22222222218Squalene/phytoene synthase
111091110911111294FHA domain
182315211715191513156AMP-binding enzyme
121113151314161711122G-protein alpha subunit
131714171414131512129HMG (high mobility group) box
33535543334His Kinase A (phospho-acceptor) domain
22232232422Armadillo/beta-catenin-like repeat
153013204615151415183Tetratricopeptide repeat
36424643234Ion transport protein
1111412415DNA gyrase/topoisomerase IV, subunit A
46765657551BRCA1 C Terminus (BRCT) domain
56665555649Glycosyl transferases group 1
33322242223Glycosyl transferase family 2
111115SAM domain (Sterile alpha motif)
32322333425linker histone H1 and H5 family
12111111110Ribosomal protein L7/L12 C-terminal domain
11112111110Urease, gamma subunit
33333333327CoA-ligase
33333343429Phosphopantetheine attachment site
22322223119Formyl transferase
11131111119910994Metallopeptidase family M24
21211121112Leucine Rich Repeat
913444455553alpha/beta hydrolase fold
33333333327RNA polymerase Rpb2, domain 6
57444545745PB1 domain
23122212217Staphylococcal nuclease homologue
121212131213121210108Rab-GTPase-TBC domain
12111111110Tudor domain
111111118WH1 domain
35333433330Zinc finger, ZZ type
11112121111HRDC domain
67756667555CBS domain
22222222319Ribosomal protein L13
22222222319Ribosomal protein L4/L1 family
1111111119Clp protease
44434553436S1 RNA binding domain
111111118HIUase/Transthyretin family
44457444440AhpC/TSA family
56844444342tRNA synthetases class I (W and Y)
2112118UvrD/REP helicase N-terminal domain
991486978878Rhodanese-like domain
22222222218Universal stress protein family
25141412159121611128Acetyltransferase (GNAT) family
1111111119SecE/Sec61-gamma subunits of protein translocation complex
121111119C-terminal regulatory domain of Threonine dehydratase
22222222218AIR synthase related protein, N-terminal domain
56565355545tRNA synthetase class II core domain (G, H, P, S and T)
22222122217Tetrapyrrole (Corrin/Porphyrin) Methylases
11211111110Glycosyl transferase family, a/b domain
11211111110Class II Aldolase and Adducin N-terminal domain
54574544442Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
429553644464Fes/CIP4, and EFC/F-BAR homology domain
22222222218IQ calmodulin-binding motif
22222422119Phosphoinositide 3-kinase family, accessory domain (PIK domain)
2142122115Phospholipase D Active site motif
32433432327Regulator of G protein signaling domain
44444344435GTPase-activator protein for Ras-like GTPase
991110915991293RasGEF domain
889891277977RasGEF N-terminal motif
134612111314131413149RhoGAP domain
161913171413151320140RhoGEF domain
43444344434SPRY domain
33243333428RNA polymerase Rpb1, domain 2
111111118Guanylate kinase
43323222324Gelsolin repeat
661096665458UBA/TS-N domain
15161417131615159130PHD-finger
13111111111GGL domain
56555859654HECT-domain (ubiquitin-transferase)
11111112110Helix-hairpin-helix motif
1111111119MSP (Major sperm protein) domain
35334334432Ribonuclease III domain
84434444338Region in Clathrin and VPS
33433322326RanBP1 domain
21222222217PPIC-type PPIASE domain
23222312219Zn-finger in Ran binding protein and others
121312161011131011108Zinc finger C-x8-C-x5-C-x3-H type (and similar)
11114B-box zinc finger
11111245218Poly(ADP-ribose) polymerase catalytic domain
22211212215Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
372628302836243027266F-box domain
111111011118Elongation factor 1 gamma, conserved domain
11121118Calpain family cysteine protease
23222222219Copper fist DNA binding domain
78787787665CRAL/TRIO domain
478258522552374540438BTB/POZ domain
111111118Inhibitor of Apoptosis domain
342133333447Voltage gated chloride channel
82613101021141420136Caspase domain
411111211GDSL-like Lipase/Acylhydrolase
22212112114Poly-adenylate binding protein, unique domain
14111111112POLO box duplicated region
211215121016111217126ABC transporter transmembrane region
33333433328FAD binding domain
11Condensation domain
1111111119S-adenosyl-L-homocysteine hydrolase, NAD binding domain
11111211110HAMP domain
22324221119ribosomal L5P family C-terminus
57564555547Insulinase (Peptidase family M16)
44444544538Dehydrogenase E1 component
1111111119Lumazine binding domain
66876767760Elongation factor G C-terminus
44445744440HMGL-like
44444444436DnaJ central domain
24252433530Starch binding domain
33332333427Ribosomal protein L1p/L10e family
6111066578463Cation transporting ATPase, C-terminus
711698688669Cation transporter/ATPase, N-terminus
1111111119dUTPase
44464444438Aconitase C-terminal domain
33333343328Amino acid kinase family
1111111119N-(5'phosphoribosyl)anthranilate (PRA) isomerase
22292223125Acyl transferase domain
11112111110Urease beta subunit
22222222218Dihydrodipicolinate synthetase family
132320171718171713155haloacid dehalogenase-like hydrolase
21111111110Glycosyl hydrolases family 2
68686867661Glycosyl hydrolases family 18
1111111119Proliferating cell nuclear antigen, N-terminal domain
11122111111Translation initiation factor IF-3, C-terminal domain
1111111119Adenylosuccinate synthetase
1111111119Asparaginase, N-terminal
32342323325Peptidase S24-like
1111111119Inorganic pyrophosphatase
109107813910884Glycosyl hydrolases family 16
9116145744666Glycosyl hydrolases family 15
5326791747794NADH:flavin oxidoreductase / NADH oxidase family
1111111183-hydroxyacyl-CoA dehydrogenase, C-terminal domain
223101111122Glycosyl hydrolase family 20, catalytic domain
55554566546HhH-GPD superfamily base excision DNA repair protein
11111211110AIR carboxylase
2236178151111139142GMC oxidoreductase
22222222218Asparagine synthase
251127Fungal cellulose binding domain
66876666859Septin
1111111119EF-1 guanine nucleotide exchange domain
1111111119Homoserine dehydrogenase
44314221122Flavin-binding monooxygenase-like
33333332326tRNA synthetases class I (E and Q), catalytic domain
1111111613tRNA synthetases class I (R)
55433655440XPG N-terminal domain
87458546451Metallo-beta-lactamase superfamily