PFAM Domains • Rhizopogon salebrosus TDB-379 v1.0
Annotations/GenomesBoled1Conpu1Gyrli1Hydpi2Leumo1Paxin1Pisti1Rhisa1Rhivi1Sclci1SerlaS7_9_2Suilu1TotalAnnotation Description
PFAMs
7,9318,3287,2708,1998,3508,9488,0348,9158,3158,0997,5268,22298,137
384741414045414941384244507ATPase family associated with various cellular activities (AAA)
314735535347444941373843518ABC transporter
445444410594562ATP synthase alpha/beta family, nucleotide-binding domain
11114EGF-like domain
141514141514141413141413168Elongation factor Tu GTP binding domain
121011111110141212121113139Helix-loop-helix DNA-binding domain
131055761197861097Hsp20/alpha crystallin family
7128810913812015815206Hsp70 protein
788888981088898KH domain
11Ribulose bisphosphate carboxylase large chain, catalytic domain
1111111111111SH2 domain
262625323026292528262425322SH3 domain
101213101311121212101013138Actin
662336393298312024215126467Ankyrin repeat
1168912978777899ADP-ribosylation factor family
4252175394134244643202936581Eukaryotic aspartyl protease
33333343333337Cyclic nucleotide-binding domain
11114Cytochrome b(C-terminal)/b6/petD
111216Cytochrome b/b6/petB
1111111112112Cytochrome c
81110788615177810115Double-stranded RNA binding motif
171417171817201818181617207EF hand
11111111121124Fe-4S binding domain
111122111112Fibronectin type III domain
11Globin
203812242414162019132221243Glutathione S-transferase, C-terminal domain
11112112221116Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
14101110121010151391013137Homeodomain
11Laminin EGF domain
233102232242540lactate/malate dehydrogenase, NAD binding domain
276676611662176115Myosin head (motor domain)
112Neuraminidase
126226981291691961171662201001521121,811Cytochrome P450
1711631591621922741742952292541432022,418Protein kinase domain
142513231816161422181618213Pyridine nucleotide-disulphide oxidoreductase
262523253424323324282326323Ras family
69798786679688Response regulator receiver domain
101417166141253997RNase H
676362666865716969766565806RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
3333268Reverse transcriptase (RNA-dependent DNA polymerase)
11Serpin (serine protease inhibitor)
111111111110Copper/zinc superoxide dismutase (SODC)
42222222322328Iron/manganese superoxide dismutases, alpha-hairpin domain
22222232422227Subtilase family
354729434232232834303631410Sugar (and other) transporter
10812121012111310141011133Thioredoxin
7555555115105573Tubulin/FtsZ family, GTPase domain
664412755483872von Willebrand factor type A domain
735955546174655555823876747Zinc finger, C2H2 type
615359566161657065504656703Zinc finger, C3HC4 type (RING finger)
1618231519135281811810525520Zinc knuckle
22322222223226Protein-tyrosine phosphatase
63107498610363417383367559838short chain dehydrogenase
317123333925233134204130401Zinc-binding dehydrogenase
44454456534553Thiolase, N-terminal domain
366779232211462Beta-ketoacyl synthase, N-terminal domain
333334433533402Fe-2S iron-sulfur cluster binding domain
11111121111113Enolase, C-terminal TIM barrel domain
111222110Cytochrome C and Quinol oxidase polypeptide I
112Cytochrome C oxidase subunit II, periplasmic domain
78789987988896Glutamine amidotransferase class-I
151010111013171011211011149TCP-1/cpn60 chaperonin family
11114ATP synthase A chain
363354418873468Glutamine synthetase, catalytic domain
11121121111114Triosephosphate isomerase
141511121117121315161113160E1-E2 ATPase
161821212120152220201822234Core histone H2A/H2B/H3/H4
112Copper binding proteins, plastocyanin/azurin family
65777657556672Alpha amylase, catalytic domain
56666635655564Phorbol esters/diacylglycerol binding domain (C1 domain)
32434433333338Bacterial transferase hexapeptide (six repeats)
73443464543350tRNA synthetases class I (I, L, M and V)
101310910910999179124Cyclin, N-terminal domain
223714252041471810307235Carboxylesterase family
24445554444449DNA polymerase family B
53333334433340ATP synthase subunit C
11111211111113Peroxidase
65133116214134Beta-lactamase
46444434444449C-5 cytosine-specific DNA methylase
11215NADH dehydrogenase
323028342831293127282629353Calcineurin-like phosphoesterase
101471417931185149121Cellulase (glycosyl hydrolase family 5)
55566765556566tRNA synthetases class II (D, K and N)
354038393843374239383737463Mitochondrial carrier protein
112recA bacterial DNA recombination protein
162316202019181314141516204Aminotransferase class I and II
77666878766781Phosphoribosyl transferase domain
151114141316131312141313161Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11111111111112Phosphoglycerate kinase
22222222222224Ribosomal protein S4/S9 N-terminal domain
23222232222226Ribosomal protein S12/S23
11111111111112Chaperonin 10 Kd subunit
131212143714151617141314191C2 domain
191719191517181717191718212PH domain
55665546667768bZIP transcription factor
171715191618141515151617194Aldehyde dehydrogenase family
596453525660545153494457652Fungal Zn(2)-Cys(6) binuclear cluster domain
292426242441222224302623315Cytochrome b5-like Heme/Steroid binding domain
24334122224332Oxidoreductase molybdopterin binding domain
79108887997810100Oxidoreductase NAD-binding domain
242823252723302422272226301SNF2 family N-terminal domain
22222222222325Ribosomal protein S7p/S5e
221923212221222121212021254Ubiquitin-conjugating enzyme
55555765455562Isocitrate/isopropylmalate dehydrogenase
22222223222225Ribosomal Proteins L2, RNA binding domain
22222222232225Hsp90 protein
22222132222224Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111111121113Dihydrofolate reductase
11Chitin recognition protein
32231213Cysteine-rich secretory protein family
11111111111112Ribosomal protein S3, C-terminal domain
2222111312118Cupin
11Annexin
333333333334372-oxoacid dehydrogenases acyltransferase (catalytic domain)
23433413214333Catalase
11UDP-glucoronosyl and UDP-glucosyl transferase
555555556175573Aminotransferase class-III
22222242222226Ribosomal protein S19
11121111111113DNA gyrase B
44333523433340Thiamine pyrophosphate enzyme, central domain
43443454664552Lyase
11111112211215Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
11111114111216Adenylate and Guanylate cyclase catalytic domain
1111111111111ATP synthase delta (OSCP) subunit
11111111111112Orotidine 5'-phosphate decarboxylase / HUMPS family
11111111111112Indole-3-glycerol phosphate synthase
11111151123119Aromatic amino acid lyase
11111111111112Pyruvate kinase, barrel domain
99109119139911109118Kinesin motor domain
292931303137293730292832372DnaJ domain
141414151516151514141514175Proteasome subunit
36446446733555Major intrinsic protein
11111211111113ATP synthase
6313333243233Glycosyl hydrolase family 1
11111111111113'5'-cyclic nucleotide phosphodiesterase
21111131111115Profilin
22222212222223Ribosomal protein L22p/L17e
22222222222224Ribosomal protein L14p/L23e
251417151531151816161615213Ubiquitin family
64555555565561Cofilin/tropomyosin-type actin-binding protein
2222232223232714-3-3 protein
11Zinc carboxypeptidase
307228484729194654184344478Aldo/keto reductase family
131213141212141314131114155Myb-like DNA-binding domain
66555556654563Forkhead domain
11Glycosyl hydrolases family 32 N-terminal domain
11111111111112Ribosomal protein L16p/L10e
21222233222225Ribosomal protein S14p/S29e
35333423333338FKBP-type peptidyl-prolyl cis-trans isomerase
11111111111112Glutathione peroxidase
11112221111115
75555555665564Flavodoxin
11Tropomyosin
11111111111112Calreticulin family
314611451123142Common central domain of tyrosinase
58677658758880Aminotransferase class-V
42224153221331Ribonucleotide reductase, small chain
585751525872534645555256655DEAD/DEAH box helicase
979181891001109581828991961,102Helicase conserved C-terminal domain
1111111119Fructose-bisphosphate aldolase class-I
11111111111112EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22222222222224Ribosomal protein L23
11111211111113Pyridoxal-dependent decarboxylase, C-terminal sheet domain
11111111111112Ribosomal protein L5
43334544745450Pyridoxal-dependent decarboxylase conserved domain
32234334523438Citrate synthase, C-terminal domain
54555444555556GHMP kinases N terminal domain
77676659656676Biotin carboxylase, N-terminal domain
111222131111127Tryptophan synthase alpha chain
97988111987998112Pyridoxal-phosphate dependent enzyme
121115161515121416131713169NUDIX domain
43333333344238pfkB family carbohydrate kinase
413497312337359Glycosyl hydrolases family 28
22222222232225Ribosomal protein L3
22222222222224Ribosomal protein L11, RNA binding domain
99877910781079100Histidine phosphatase superfamily (branch 1)
11111231111115Thymidylate synthase
44444549544556ATP synthase alpha/beta chain, C terminal domain
54447655455458Calponin homology (CH) domain
55555556656664Glutamine amidotransferases class-II
22222223222225Ribosomal protein S15
211151331125237Thaumatin family
11111111111112Fructose-1-6-bisphosphatase, N-terminal domain
11112111111113Ribonucleotide reductase, all-alpha domain
22222322222225Ribosomal protein S2
22222222222224SRF-type transcription factor (DNA-binding and dimerisation domain)
81010999111019121010127GATA zinc finger
233327302945213437262533363Amino acid permease
910813111188641010108Prolyl oligopeptidase family
12111121111114Ribosomal protein L30p/L7e
121717211822142118171113201Histidine phosphatase superfamily (branch 2)
1111111111111Respiratory-chain NADH dehydrogenase, 30 Kd subunit
454555411544460Aconitase family (aconitate hydratase)
231331114Glycosyl hydrolase family 10
11111111111112Glycosyl hydrolases family 17
23232222122225Ribosomal protein S5, N-terminal domain
11111111111112Nucleoside diphosphate kinase
1124111212117Tetraspanin family
44Galactoside-binding lectin
21222232231224Ribosomal protein S10p/S20e
53354644513548Arrestin (or S-antigen), N-terminal domain
21112221221118Phosphoglucose isomerase
1111111221113Carbohydrate phosphorylase
11111111111112SecY translocase
11111111111112Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222222222224Ribosomal protein L6
54555758566768Polyprenyl synthetase
23222222222225Hexokinase
67108812774109795Dynamin family
11111111211113Transcription factor TFIID (or TATA-binding protein, TBP)
11RTX calcium-binding nonapeptide repeat (4 copies)
23344334454342Rieske [2Fe-2S] domain
112321111Proton-conducting membrane transporter
78899688878995Biotin-requiring enzyme
21111211131116Phosphofructokinase
22222222221223Ribosomal protein S17
11111121111113Hydroxymethylglutaryl-coenzyme A reductase
23233423443336FGGY family of carbohydrate kinases, N-terminal domain
78888138118889104Enoyl-CoA hydratase/isomerase
11Insect cuticle protein
22222222222224Ribosomal protein S9/S16
32222231352229Transcription factor TFIIB repeat
86798878967790Cytidine and deoxycytidylate deaminase zinc-binding region
21111111111113Molybdopterin oxidoreductase
107671118441110831310230Chromo (CHRromatin Organisation MOdifier) domain
12222333322227Phosphatidylinositol-specific phospholipase C, Y domain
12333344422435Phosphatidylinositol-specific phospholipase C, X domain
57578746646570D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
23333223313432Malic enzyme, N-terminal domain
111121112111146-phosphogluconate dehydrogenase, C-terminal domain
1081111141511161711619149Multicopper oxidase
11791110119702310833212WW domain
12222222222324Ribosomal RNA adenine dimethylase
2902171823192704782825773852061376193,962WD domain, G-beta repeat
43433535433444Heavy-metal-associated domain
43444453343344Adenylate kinase
22121122122220Phosphoglucomutase/phosphomannomutase, C-terminal domain
11111111211214Ribosomal protein S8
11112122212218Ribosomal protein S11
65666669867677LIM domain
11Matrixin
24232233332332Regulator of chromosome condensation (RCC1) repeat
21222222222223Ribosomal protein S13/S18
111115NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
22222522322228chorismate binding enzyme
3332323233323260s Acidic ribosomal protein
55445644544454Prenyltransferase and squalene oxidase repeat
97888798687691Protein kinase C terminal domain
1111111111111Single-strand binding protein family
11121111111113S-adenosylmethionine synthetase, N-terminal domain
141010101010123510121011154Bromodomain
79988897879796Acyl-CoA dehydrogenase, C-terminal domain
141415161415161815141515181Ubiquitin carboxyl-terminal hydrolase
1111111111111Ribosomal protein L36
232242222223Ribonuclease T2 family
11Gonadotropin-releasing hormone
64544484463759HSF-type DNA-binding
22222322222326SRP54-type protein, GTPase domain
11111212151118Urease alpha-subunit, N-terminal domain
1612108101091318121210140Serine carboxypeptidase
88889897788795Phosphatidylinositol 3- and 4-kinase
22232222232327Transketolase, thiamine diphosphate binding domain
11111111111112WHEP-TRS domain
42332222232229Inositol monophosphatase family
54544664454455Glutaredoxin
33333333333336Isocitrate lyase family
11111211111113Serine hydroxymethyltransferase
22222323222226Iron-containing alcohol dehydrogenase
22222222122223Ribosomal protein L10
25445554544754KOW motif
11121111111113Ribosomal protein L34
32133222323329RF-1 domain
34345214414439Sodium:solute symporter family
211111111111Imidazoleglycerol-phosphate dehydratase
1111111111111DNA polymerase family A
11111315111118IMP dehydrogenase / GMP reductase domain
1111111111111Glucose-6-phosphate dehydrogenase, NAD binding domain
7871010981386109105Protein phosphatase 2C
23333323233333Nucleotidyl transferase
25323423264440Carbonic anhydrase
11111111111112Phosphoribulokinase / Uridine kinase family
13781372656516126124Fatty acid desaturase
65676666667673MutS domain V
11111112321116Delta-aminolevulinic acid dehydratase
35345434623648Arginase family
66666666666672MCM P-loop domain
11111211211114Squalene/phytoene synthase
111911912881214121012138FHA domain
11NADH-ubiquinone/plastoquinone oxidoreductase chain 6
254029413247424147234930446AMP-binding enzyme
181412151613111214111411161G-protein alpha subunit
201415161615161616161517192HMG (high mobility group) box
11114NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
111115Cytochrome c oxidase subunit III
16355433334343His Kinase A (phospho-acceptor) domain
33232343343437Armadillo/beta-catenin-like repeat
462130332826312830263531365Tetratricopeptide repeat
73222223322333Ion transport protein
11121111111113DNA gyrase/topoisomerase IV, subunit A
1291010991010910910117BRCA1 C Terminus (BRCT) domain
74666669776676Glycosyl transferases group 1
33443344475448Glycosyl transferase family 2
111311321216SAM domain (Sterile alpha motif)
33343324424439linker histone H1 and H5 family
11111111111112Ribosomal protein L7/L12 C-terminal domain
117111315ribonuclease
1111112111112Urease, gamma subunit
33333433333337CoA-ligase
71291413114493247117Phosphopantetheine attachment site
43222322232229Formyl transferase
1099101010121012101010122Metallopeptidase family M24
171416181814192617161418207Leucine Rich Repeat
294532343626242826164027363alpha/beta hydrolase fold
33333333333336RNA polymerase Rpb2, domain 6
57645555555562PB1 domain
22222212222223Staphylococcal nuclease homologue
1110111010111111101099123Rab-GTPase-TBC domain
1111111111111Tudor domain
21222222212222WH1 domain
33333323323334Zinc finger, ZZ type
111111111110HRDC domain
9989911999899108CBS domain
22222222222224Ribosomal protein L13
22222222232225Ribosomal protein L4/L1 family
11111111111112Clp protease
45544644453452S1 RNA binding domain
1111111111111HIUase/Transthyretin family
45557655564461AhpC/TSA family