Due to a planned NERSC power outage, JGI portals will be unavailable 6:00am PDT July 10 - 11:59pm PDT July 14. System Status updates available here.
PFAM Domains • Thermoascus aurantiacus ATCC26904 v2.0
Annotations/GenomesBysni1Byssp1Paevar1Paevar_HGY_1Theau1Theau2TotalAnnotation Description
PFAMs
11,48110,1319,6639,7587,0798,87256,984
1122177 transmembrane receptor (Secretin family)
403639414341240ATPase family associated with various cellular activities (AAA)
574642413435255ABC transporter
44444424ATP synthase alpha/beta family, nucleotide-binding domain
16151515141691Elongation factor Tu GTP binding domain
10101010101060Helix-loop-helix DNA-binding domain
44444424Hsp20/alpha crystallin family
8101097852Hsp70 protein
67668740KH domain
11SH2 domain
13131413231591SH3 domain
11101010101061Actin
22111010341299Ankyrin repeat
1124PAN domain
77777742ADP-ribosylation factor family
109998954Eukaryotic aspartyl protease
44444424Cyclic nucleotide-binding domain
11Cytochrome b(C-terminal)/b6/petD
411118Cytochrome c
1222119Double-stranded RNA binding motif
111118123EF hand
1124Fe-4S binding domain
111115Fibronectin type III domain
1211117Globin
1513987759Glutathione S-transferase, C-terminal domain
22222212Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
33335320Homeodomain
44332218lactate/malate dehydrogenase, NAD binding domain
11Low-density lipoprotein receptor repeat class B
45554427Myosin head (motor domain)
13010267715052472Cytochrome P450
137114133141102107734Protein kinase domain
17181717141497Pyridine nucleotide-disulphide oxidoreductase
242324242324142Ras family
91099101057Response regulator receiver domain
6421114RNase H
565455556452336RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
22Reverse transcriptase (RNA-dependent DNA polymerase)
33331316Copper/zinc superoxide dismutase (SODC)
22222212Iron/manganese superoxide dismutases, alpha-hairpin domain
96554635Subtilase family
807962595659395Sugar (and other) transporter
10101111111063Thioredoxin
2212119Trypsin
44454425Tubulin/FtsZ family, GTPase domain
22von Willebrand factor type A domain
261922225717163Zinc finger, C2H2 type
233338251Zinc finger, C3HC4 type (RING finger)
33124215Zinc knuckle
22222212Protein-tyrosine phosphatase
13211291857771568short chain dehydrogenase
777250494640334Zinc-binding dehydrogenase
77777742Thiolase, N-terminal domain
331012127781Beta-ketoacyl synthase, N-terminal domain
433353212Fe-2S iron-sulfur cluster binding domain
33332216Enolase, C-terminal TIM barrel domain
11Cytochrome C and Quinol oxidase polypeptide I
109999955Glutamine amidotransferase class-I
10101010101060TCP-1/cpn60 chaperonin family
33223316Glutamine synthetase, catalytic domain
22222212Triosephosphate isomerase
232121231822128E1-E2 ATPase
87777743Core histone H2A/H2B/H3/H4
14131112121274Alpha amylase, catalytic domain
22222212Phorbol esters/diacylglycerol binding domain (C1 domain)
69767742Bacterial transferase hexapeptide (six repeats)
56563530tRNA synthetases class I (I, L, M and V)
88887847Cyclin, N-terminal domain
17161716111188Carboxylesterase family
4344419DNA polymerase family B
44444424ATP synthase subunit C
43332217Peroxidase
1310874446Beta-lactamase
33333520C-5 cytosine-specific DNA methylase
11NADH dehydrogenase
312729292523164Calcineurin-like phosphoesterase
108986950Cellulase (glycosyl hydrolase family 5)
87777743tRNA synthetases class II (D, K and N)
403839383637228Mitochondrial carrier protein
11recA bacterial DNA recombination protein
272120201516119Aminotransferase class I and II
44449429Phosphoribosyl transferase domain
10101010101060Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111116Phosphoglycerate kinase
22221110Ribosomal protein S4/S9 N-terminal domain
22222212Ribosomal protein S12/S23
2121118Bacterial regulatory helix-turn-helix proteins, AraC family
1111116Chaperonin 10 Kd subunit
898812954C2 domain
911111119970PH domain
1513131381274bZIP transcription factor
372920211819144Aldehyde dehydrogenase family
2981392012021361431,119Fungal Zn(2)-Cys(6) binuclear cluster domain
282423232222142Cytochrome b5-like Heme/Steroid binding domain
44333320Oxidoreductase molybdopterin binding domain
16161112121178Oxidoreductase NAD-binding domain
252325242527149SNF2 family N-terminal domain
22222212Ribosomal protein S7p/S5e
232323232123136Ubiquitin-conjugating enzyme
88778846Isocitrate/isopropylmalate dehydrogenase
22222212Ribosomal Proteins L2, RNA binding domain
1111116Hsp90 protein
22222212Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111116Dihydrofolate reductase
103433528Chitin recognition protein
22222212Cysteine-rich secretory protein family
1111116Ribosomal protein S3, C-terminal domain
67674434Cupin
2111117Annexin
112Eukaryotic-type carbonic anhydrase
1113Chalcone and stilbene synthases, N-terminal domain
333333182-oxoacid dehydrogenases acyltransferase (catalytic domain)
58773333Catalase
1111116Disintegrin
6321315UDP-glucoronosyl and UDP-glucosyl transferase
118556641Aminotransferase class-III
22222212Ribosomal protein S19
1111116DNA gyrase B
108986647Thiamine pyrophosphate enzyme, central domain
44434423Lyase
22222212Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1111116Ferritin-like domain
1111116Adenylate and Guanylate cyclase catalytic domain
1111116ATP synthase delta (OSCP) subunit
22222212Orotidine 5'-phosphate decarboxylase / HUMPS family
1111116Indole-3-glycerol phosphate synthase
12115Aromatic amino acid lyase
1111116Pyruvate kinase, barrel domain
8101010101058Kinesin motor domain
282726272727162DnaJ domain
14141414141484Proteasome subunit
45552223Major intrinsic protein
1111116ATP synthase
332210Glycosyl hydrolase family 1
11111163'5'-cyclic nucleotide phosphodiesterase
1111116Profilin
22221211Ribosomal protein L22p/L17e
22212211Ribosomal protein L14p/L23e
91099101057Ubiquitin family
54553426Cofilin/tropomyosin-type actin-binding protein
3333231714-3-3 protein
21113210Alkaline phosphatase
1111116Zinc carboxypeptidase
483834352525205Aldo/keto reductase family
385514641Myb-like DNA-binding domain
44444424Forkhead domain
2211118Glycosyl hydrolases family 32 N-terminal domain
22221211Ribosomal protein L16p/L10e
21222110Ribosomal protein S14p/S29e
33333318FKBP-type peptidyl-prolyl cis-trans isomerase
2111117Glutathione peroxidase
22
107787746Flavodoxin
11Protamine P1
1111116Calreticulin family
61213417Common central domain of tyrosinase
88888747Aminotransferase class-V
1111116Ribonucleotide reductase, small chain
414240403742242DEAD/DEAH box helicase
706769686970413Helicase conserved C-terminal domain
1111116EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22222212Ribosomal protein L23
1111116Pyridoxal-dependent decarboxylase, C-terminal sheet domain
1111116Ribosomal protein L5
76666637Pyridoxal-dependent decarboxylase conserved domain
44343422Citrate synthase, C-terminal domain
55555530GHMP kinases N terminal domain
76667739Biotin carboxylase, N-terminal domain
2111117Tryptophan synthase alpha chain
17141313111179Pyridoxal-phosphate dependent enzyme
13121314151380NUDIX domain
64555530pfkB family carbohydrate kinase
64665532Glycosyl hydrolases family 28
9765229Luciferase-like monooxygenase
22222212Ribosomal protein L3
22222212Ribosomal protein L11, RNA binding domain
14141515131384Histidine phosphatase superfamily (branch 1)
1111116Thymidylate synthase
44444424ATP synthase alpha/beta chain, C terminal domain
55555429Calponin homology (CH) domain
11Bacterial dnaA protein
33335118Glutamine amidotransferases class-II
22222212Ribosomal protein S15
112Thaumatin family
1111116Fructose-1-6-bisphosphatase, N-terminal domain
1111116Ribonucleotide reductase, all-alpha domain
22222212Ribosomal protein S2
72332219SRF-type transcription factor (DNA-binding and dimerisation domain)
54446528GATA zinc finger
221710123313107Amino acid permease
55333322Prolyl oligopeptidase family
22222212Ribosomal protein L30p/L7e
131212129967Histidine phosphatase superfamily (branch 2)
1111116Respiratory-chain NADH dehydrogenase, 30 Kd subunit
66555532Aconitase family (aconitate hydratase)
1113Glycosyl hydrolase family 10
21113210Glycosyl hydrolases family 17
22221211Ribosomal protein S5, N-terminal domain
1111116Nucleoside diphosphate kinase
211217Tetraspanin family
11Galactoside-binding lectin
22222212Ribosomal protein S10p/S20e
65665432Arrestin (or S-antigen), N-terminal domain
1111116Phosphoglucose isomerase
1111116Carbohydrate phosphorylase
1111116SecY translocase
1111116Respiratory-chain NADH dehydrogenase, 49 Kd subunit
12222211Ribosomal protein L6
44663326Polyprenyl synthetase
76555432Hexokinase
10911136857Dynamin family
1111116Transcription factor TFIID (or TATA-binding protein, TBP)
66554329Rieske [2Fe-2S] domain
1111116Phytochrome region
11Proton-conducting membrane transporter
87778845Biotin-requiring enzyme
2111117Phosphofructokinase
1112117Ribosomal protein S17
22221110Hydroxymethylglutaryl-coenzyme A reductase
44334422FGGY family of carbohydrate kinases, N-terminal domain
111189101160Enoyl-CoA hydratase/isomerase
22222212Ribosomal protein S9/S16
22222212Transcription factor TFIIB repeat
74557735Cytidine and deoxycytidylate deaminase zinc-binding region
1122118Molybdopterin oxidoreductase
44453424Chromo (CHRromatin Organisation MOdifier) domain
1111228Phosphatidylinositol-specific phospholipase C, Y domain
32222314Phosphatidylinositol-specific phospholipase C, X domain
1517888864D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
22222212Malic enzyme, N-terminal domain
112PEP-utilising enzyme, mobile domain
222222126-phosphogluconate dehydrogenase, C-terminal domain
141111127762Multicopper oxidase
9999111057WW domain
1111116Ribosomal RNA adenine dimethylase
105104108107109107640WD domain, G-beta repeat
65565532Heavy-metal-associated domain
66664533Adenylate kinase
44442321Phosphoglucomutase/phosphomannomutase, C-terminal domain
22222212Ribosomal protein S8
22221211Ribosomal protein S11
44444424LIM domain
11Matrixin
23241214Regulator of chromosome condensation (RCC1) repeat
22222212Ribosomal protein S13/S18
11NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
23222213chorismate binding enzyme
3333331860s Acidic ribosomal protein
44444424Prenyltransferase and squalene oxidase repeat
43446425Protein kinase C terminal domain
1111116Single-strand binding protein family
1111116S-adenosylmethionine synthetase, N-terminal domain
87997747Bromodomain
91089101157Acyl-CoA dehydrogenase, C-terminal domain
14141414161587Ubiquitin carboxyl-terminal hydrolase
11114Ribosomal protein L36
22222212Ribonuclease T2 family
33333318HSF-type DNA-binding
22222212SRP54-type protein, GTPase domain
1111116Urease alpha-subunit, N-terminal domain
111010108857Serine carboxypeptidase
76777741Phosphatidylinositol 3- and 4-kinase
22222212Transketolase, thiamine diphosphate binding domain
21126Glycosyl hydrolases family 11
44334422Inositol monophosphatase family
54444425Glutaredoxin
21225214Isocitrate lyase family
22222212Serine hydroxymethyltransferase
45553325Iron-containing alcohol dehydrogenase
22221211Ribosomal protein L10
55555429KOW motif
1111116Ribosomal protein L34
11Ribosomal protein L33
33332317RF-1 domain
88783337Sodium:solute symporter family
1111116Imidazoleglycerol-phosphate dehydratase
111115DNA polymerase family A
2111117IMP dehydrogenase / GMP reductase domain
1111116Glucose-6-phosphate dehydrogenase, NAD binding domain
77776640Protein phosphatase 2C
23333317Nucleotidyl transferase
22222212Carbonic anhydrase
21121310Phosphoribulokinase / Uridine kinase family
8810104444Fatty acid desaturase
65665634MutS domain V
1111116Delta-aminolevulinic acid dehydratase
77784437Arginase family
66666636MCM P-loop domain
22121210Squalene/phytoene synthase
101191091059FHA domain
564640453636259AMP-binding enzyme
33333318G-protein alpha subunit
76677740HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
11Cytochrome c oxidase subunit III
68775639His Kinase A (phospho-acceptor) domain
22223213Armadillo/beta-catenin-like repeat
13151413231391Tetratricopeptide repeat
1111228Ion transport protein
1111116DNA gyrase/topoisomerase IV, subunit A
868911749BRCA1 C Terminus (BRCT) domain
76558536Glycosyl transferases group 1
12223111Glycosyl transferase family 2
22122211SAM domain (Sterile alpha motif)
1111116linker histone H1 and H5 family
1111116Ribosomal protein L7/L12 C-terminal domain
2323212ribonuclease
1111116Urease, gamma subunit
44444424CoA-ligase
46222425711135Phosphopantetheine attachment site
32222213Formyl transferase
12131111101067Metallopeptidase family M24
412215125Leucine Rich Repeat
585530659alpha/beta hydrolase fold
33333318RNA polymerase Rpb2, domain 6
44444424PB1 domain
22222212Staphylococcal nuclease homologue
12121212121272Rab-GTPase-TBC domain
1111116Tudor domain
1111116WH1 domain
33345523Zinc finger, ZZ type
2222210HRDC domain
87669642CBS domain
22222212Ribosomal protein L13
22222212Ribosomal protein L4/L1 family
1111116Clp protease
43443422S1 RNA binding domain
1111116HIUase/Transthyretin family
54332219AhpC/TSA family
45554427tRNA synthetases class I (W and Y)
12227UvrD/REP helicase N-terminal domain
128985850Rhodanese-like domain
22222212Universal stress protein family
262124232423141Acetyltransferase (GNAT) family
1111116SecE/Sec61-gamma subunits of protein translocation complex
1111116C-terminal regulatory domain of Threonine dehydratase
22222212AIR synthase related protein, N-terminal domain
87778744tRNA synthetase class II core domain (G, H, P, S and T)
1111116SpoU rRNA Methylase family
22222212Tetrapyrrole (Corrin/Porphyrin) Methylases
1111116Glycosyl transferase family, a/b domain
121127PDZ domain
106654435Class II Aldolase and Adducin N-terminal domain
44444424Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
55555530Fes/CIP4, and EFC/F-BAR homology domain
24225116IQ calmodulin-binding motif
22222212Phosphoinositide 3-kinase family, accessory domain (PIK domain)
22335318Phospholipase D Active site motif
44442422Regulator of G protein signaling domain
33333318GTPase-activator protein for Ras-like GTPase
66654532RasGEF domain
55554428RasGEF N-terminal motif
77777742RhoGAP domain
66666636RhoGEF domain
22222212SPRY domain
33333318RNA polymerase Rpb1, domain 2
1111116Guanylate kinase
34334320Gelsolin repeat
56556633UBA/TS-N domain
15131414171386PHD-finger
1111116GGL domain
66666636HECT-domain (ubiquitin-transferase)
1111217Helix-hairpin-helix motif
1111116MSP (Major sperm protein) domain
54445426Ribonuclease III domain
53443423Region in Clathrin and VPS
33233317RanBP1 domain
1111217PPIC-type PPIASE domain
22221211Zn-finger in Ran binding protein and others
767715951Zinc finger C-x8-C-x5-C-x3-H type (and similar)
22222212Poly(ADP-ribose) polymerase catalytic domain
1111116Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
851111421087F-box domain
1111116Elongation factor 1 gamma, conserved domain
22222212Calpain family cysteine protease
23333317Copper fist DNA binding domain
68665536CRAL/TRIO domain
18121313101379BTB/POZ domain
112Ricin-type beta-trefoil lectin domain
1111116Inhibitor of Apoptosis domain
33333318Voltage gated chloride channel
22332214Caspase domain
34555325GDSL-like Lipase/Acylhydrolase
1111116Poly-adenylate binding protein, unique domain
312018191616120ABC transporter transmembrane region
86676639FAD binding domain
14610113448Condensation domain
1111116S-adenosyl-L-homocysteine hydrolase, NAD binding domain
1111116HAMP domain
22222212ribosomal L5P family C-terminus
66666636Insulinase (Peptidase family M16)
44444424Dehydrogenase E1 component
1111116Lumazine binding domain
66556634Elongation factor G C-terminus
45445527HMGL-like
44444424DnaJ central domain
1111116Starch binding domain
33332317Ribosomal protein L1p/L10e family
76668942Cation transporting ATPase, C-terminus
11111111131370Cation transporter/ATPase, N-terminus
211116dUTPase
66555532Aconitase C-terminal domain
34443321Amino acid kinase family
1112117N-(5'phosphoribosyl)anthranilate (PRA) isomerase
32912125676Acyl transferase domain
1111116Urease beta subunit
76555533Dihydrodipicolinate synthetase family
181717193620127haloacid dehalogenase-like hydrolase
23332215Glycosyl hydrolases family 2
19111413141586Glycosyl hydrolases family 18
1111116Proliferating cell nuclear antigen, N-terminal domain
1111116Translation initiation factor IF-3, C-terminal domain
11114Acylphosphatase
1111116Adenylosuccinate synthetase
2111117Asparaginase, N-terminal
32223315Peptidase S24-like
33332216Inorganic pyrophosphatase
101010105853Glycosyl hydrolases family 16
34332217Glycosyl hydrolases family 15
11121185552NADH:flavin oxidoreductase / NADH oxidase family
653333233-hydroxyacyl-CoA dehydrogenase, C-terminal domain
22222212Glycosyl hydrolase family 20, catalytic domain
55554529HhH-GPD superfamily base excision DNA repair protein
1222119AIR carboxylase
212520201415115GMC oxidoreductase
22223314Asparagine synthase
11Fungal cellulose binding domain
66665635Septin
1211117EF-1 guanine nucleotide exchange domain
1111116Homoserine dehydrogenase
126563638Flavin-binding monooxygenase-like
43443321tRNA synthetases class I (E and Q), catalytic domain
1111116tRNA synthetases class I (R)
44443423XPG N-terminal domain
171499131274Metallo-beta-lactamase superfamily
1113F5/8 type C domain
22222212Choline/Carnitine o-acyltransferase
1221129Putative esterase
1111116Ferrochelatase
32222213Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1111116Arginosuccinate synthase
1111116Electron transfer flavoprotein FAD-binding domain
33333318RNB domain
117775542Dioxygenase
33332317CNH domain
22222212Diacylglycerol kinase catalytic domain
78787744Dual specificity phosphatase, catalytic domain
22222212P21-Rho-binding domain
14141414151485PX domain
22222212Ras association (RalGDS/AF-6) domain
66664432UBX domain
43444423VHS domain
1111116Phosphoinositide 3-kinase C2
22222212DAHP synthetase I family
131111118862Carbon-nitrogen hydrolase
22221110N-acetyltransferase
11Geminivirus Rep catalytic domain
1111116Prephenate dehydratase
22223213Syntaxin
44445425Pumilio-family RNA binding repeat
66766738Histone-like transcription factor (CBF/NF-Y) and archaeal histone
1111116Pterin binding enzyme
22222212ER lumen protein retaining receptor
22222212tRNA N6-adenosine threonylcarbamoyltransferase
1111228Histidinol dehydrogenase
33334420impB/mucB/samB family
11
1111116Ribosomal L15
44441320Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
1111116Ribosomal L28 family
1111116Ribosomal L29 protein
11114Ribosomal L39 protein
1111116Ribosomal S17
1111116Ribulose-phosphate 3 epimerase family
1111116Translationally controlled tumour protein
112Glycosyl hydrolase family 7
5544220Ring hydroxylating alpha subunit (catalytic domain)
1111116RNA pseudouridylate synthase
44444424Histone deacetylase domain
64232219POT family
1111116PWWP domain
13121515111278SET domain
118886647Isochorismatase family
22222212Permease family
1111116Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
45444425XPG I-region
111115Acetokinase family
1113DNA photolyase
3522113Nitroreductase family
88767743Sulfatase
11111166,7-dimethyl-8-ribityllumazine synthase
1111116Ribosomal protein S16
22222212Acyl CoA binding protein
44444424Cullin family
554412838FAD binding domain
171112129869O-methyltransferase domain
23224316EamA-like transporter family
22
88888848ThiF family
1111116Ribosomal family S4e
67447533Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
55553326Ammonium Transporter Family
33434320Sulfate permease family
22221110MATH domain
57554430Dehydratase family
14223315Transaldolase/Fructose-6-phosphate aldolase
22222212Mechanosensitive ion channel
22221211GTP cyclohydrolase II
11111163,4-dihydroxy-2-butanone 4-phosphate synthase
44444424Adaptor complexes medium subunit family
7777836Exonuclease
1111116Dipeptidyl peptidase IV (DPP IV) N-terminal region
7126420NB-ARC domain
11Lamin Tail Domain
148778852Glycosyl hydrolase family 3 N terminal domain
1111116Ribosomal protein L44
11114Sodium:sulfate symporter transmembrane region
1111116DNA-dependent RNA polymerase
22222212FAD binding domain in molybdopterin dehydrogenase
1111116Glycosyl transferase family 4
22332214HCO3- transporter family
22222212Nucleosome assembly protein (NAP)
44444424Synaptobrevin
1111116GMP synthase C terminal domain
53334422Adenosine/AMP deaminase
109666643Oxidoreductase FAD-binding domain
44342219Thioesterase domain
22222212Histidine biosynthesis protein
67666637Glycosyltransferase family 20
11114UDP-glucose/GDP-mannose dehydrogenase family, central domain
22222212Carbamoyl-phosphate synthase small chain, CPSase domain
11PAS fold
22332315Probable molybdopterin binding domain
44444424Sec1 family
22222212GDP dissociation inhibitor
78778845Sodium/hydrogen exchanger family
22222212RNA polymerase Rpb3/RpoA insert domain
55556632Initiation factor 2 subunit family
11PQQ enzyme repeat
22222212Electron transfer flavoprotein domain
1111116Uricase
1111116Ribosomal S3Ae family
111115Ribosomal L27 protein
1111116GTP1/OBG
31222212Gamma-glutamyltranspeptidase
1111116Ribosomal L40e family
1111116GrpE
33222214TatD related DNase
22221211Inhibitor of apoptosis-promoting Bax1
1111116Eukaryotic DNA topoisomerase I, catalytic core
758104741Dynamin central region
232222136-O-methylguanine DNA methyltransferase, DNA binding domain
33