PFAM Domains • Rigidoporus microporus ED310 v1.0
Annotations/GenomesFomme1Onnsc1Porchr1Pornie1_2Ricfib1Ricmel1Rigmic1Schpa1Triab1_1TotalAnnotation Description
PFAMs
7,6007,20810,12610,55211,8318,9458,6418,8588,60582,366
117 transmembrane receptor (rhodopsin family)
414248454641415147402ATPase family associated with various cellular activities (AAA)
374447536571405451462ABC transporter
415455444449ATP synthase alpha/beta family, nucleotide-binding domain
112EGF-like domain
141414141818141616138Elongation factor Tu GTP binding domain
12111311121191210101Helix-loop-helix DNA-binding domain
7616135667874Hsp20/alpha crystallin family
913141128191197121Hsp70 protein
887681178972KH domain
11114SH2 domain
282815181935122629210SH3 domain
11u-PAR/Ly-6 domain
122014151413101213123Actin
202359124252823167Ankyrin repeat
77771011781377ADP-ribosylation factor family
354641445855262737369Eukaryotic aspartyl protease
33333333327Cyclic nucleotide-binding domain
1111111119Cytochrome c
8111111859131490Double-stranded RNA binding motif
15173322232122108EF hand
1111264Fe-4S binding domain
11111117Fibronectin type III domain
19769132051618113Glutathione S-transferase, C-terminal domain
12111111110Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
22Hemopexin
991011111299787Homeodomain
22332222220lactate/malate dehydrogenase, NAD binding domain
54545555745Myosin head (motor domain)
1201161261331401361432061811,301Cytochrome P450
2441482582954003502482922512,486Protein kinase domain
1717910112081615123Pyridine nucleotide-disulphide oxidoreductase
242427283532262424244Ras family
9910111615812999Response regulator receiver domain
145611724242RNase H
596163596068576260549RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
66Reverse transcriptase (RNA-dependent DNA polymerase)
11111121110Copper/zinc superoxide dismutase (SODC)
22332412221Iron/manganese superoxide dismutases, alpha-hairpin domain
58111115812626102Subtilase family
322543483424312834299Sugar (and other) transporter
121099131199991Thioredoxin
55579444447Tubulin/FtsZ family, GTPase domain
3257219von Willebrand factor type A domain
546421201948195661362Zinc finger, C2H2 type
48521011107075758323Zinc finger, C3HC4 type (RING finger)
141477111362025117Zinc knuckle
22223222219Protein-tyrosine phosphatase
9559847857645797113704short chain dehydrogenase
513151632632274253376Zinc-binding dehydrogenase
56555444442Thiolase, N-terminal domain
67546812645Beta-ketoacyl synthase, N-terminal domain
331113133192Fe-2S iron-sulfur cluster binding domain
21112112112Enolase, C-terminal TIM barrel domain
8811128788777Glutamine amidotransferase class-I
13111214101810109107TCP-1/cpn60 chaperonin family
11ATP synthase A chain
33333333327Glutamine synthetase, catalytic domain
1111111119Triosephosphate isomerase
121112152312171111124E1-E2 ATPase
161718161418141718148Core histone H2A/H2B/H3/H4
123118Copper binding proteins, plastocyanin/azurin family
57111077811975Alpha amylase, catalytic domain
55559655550Phorbol esters/diacylglycerol binding domain (C1 domain)
24336546336Bacterial transferase hexapeptide (six repeats)
33555544337tRNA synthetases class I (I, L, M and V)
81099161010111093Cyclin, N-terminal domain
221221222018181724174Carboxylesterase family
33335433330DNA polymerase family B
24333333327ATP synthase subunit C
1861922252671917159Peroxidase
11474314530Beta-lactamase
54444455439C-5 cytosine-specific DNA methylase
11NADH dehydrogenase
302321282928222626233Calcineurin-like phosphoesterase
151326232819211218175Cellulase (glycosyl hydrolase family 5)
55757755551tRNA synthetases class II (D, K and N)
343636404441383440343Mitochondrial carrier protein
141115161414131314124Aminotransferase class I and II
55444736644Phosphoribosyl transferase domain
121212141412131311113Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
111111118Phosphoglycerate kinase
22222212217Ribosomal protein S4/S9 N-terminal domain
32222223220Ribosomal protein S12/S23
1111111119Chaperonin 10 Kd subunit
291726241615101215164C2 domain
182110892471921137PH domain
6691010798671bZIP transcription factor
161518181418141516144Aldehyde dehydrogenase family
827375871011237911890828Fungal Zn(2)-Cys(6) binuclear cluster domain
212322272423172022199Cytochrome b5-like Heme/Steroid binding domain
2111121312Oxidoreductase molybdopterin binding domain
677788810768Oxidoreductase NAD-binding domain
202223243828222224223SNF2 family N-terminal domain
22222222218Ribosomal protein S7p/S5e
212121222621202620198Ubiquitin-conjugating enzyme
66678656656Isocitrate/isopropylmalate dehydrogenase
22222222218Ribosomal Proteins L2, RNA binding domain
32342222222Hsp90 protein
32342222121Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111111119Dihydrofolate reductase
112Chitin recognition protein
12222244221Cysteine-rich secretory protein family
11112111110Ribosomal protein S3, C-terminal domain
22215553530Cupin
11Eukaryotic-type carbonic anhydrase
343534333312-oxoacid dehydrogenases acyltransferase (catalytic domain)
22222312420Catalase
1111111119Disintegrin
71893111233UDP-glucoronosyl and UDP-glucosyl transferase
55655565547Aminotransferase class-III
22223222219Ribosomal protein S19
1111111119DNA gyrase B
32333333427Thiamine pyrophosphate enzyme, central domain
33333333327Lyase
12222221216Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
31111111111Adenylate and Guanylate cyclase catalytic domain
11112211111ATP synthase delta (OSCP) subunit
1111111119Orotidine 5'-phosphate decarboxylase / HUMPS family
22111122113Indole-3-glycerol phosphate synthase
11121111211Aromatic amino acid lyase
1111111119Pyruvate kinase, barrel domain
1099111010991188Kinesin motor domain
272930362830273228267DnaJ domain
141416161614131416133Proteasome subunit
22221224320Major intrinsic protein
1111111119ATP synthase
52451154330Glycosyl hydrolase family 1
11111111193'5'-cyclic nucleotide phosphodiesterase
1111111119Profilin
22222121216Ribosomal protein L22p/L17e
22214322220Ribosomal protein L14p/L23e
161617212327121815165Ubiquitin family
56585664651Cofilin/tropomyosin-type actin-binding protein
22221572223614-3-3 protein
1123411Alkaline phosphatase
1111111119Zinc carboxypeptidase
562546504743305559411Aldo/keto reductase family
1113876115131589Myb-like DNA-binding domain
56666645751Forkhead domain
112Glycosyl hydrolases family 32 N-terminal domain
14212121115Ribosomal protein L16p/L10e
12222222217Ribosomal protein S14p/S29e
33334333328FKBP-type peptidyl-prolyl cis-trans isomerase
1111111119Glutathione peroxidase
221117
77665758556Flavodoxin
11Protamine P1
1111111119Calreticulin family
14531216Common central domain of tyrosinase
679107877667Aminotransferase class-V
11118515225Ribonucleotide reductase, small chain
414449516360486256474DEAD/DEAH box helicase
6975788010699719689763Helicase conserved C-terminal domain
11121121111Fructose-bisphosphate aldolase class-I
1111111119EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22222322219Ribosomal protein L23
1111111119Pyridoxal-dependent decarboxylase, C-terminal sheet domain
11112311112Ribosomal protein L5
46448676651Pyridoxal-dependent decarboxylase conserved domain
32454343331Citrate synthase, C-terminal domain
56555555546GHMP kinases N terminal domain
671096666864Biotin carboxylase, N-terminal domain
1111111119Tryptophan synthase alpha chain
87899977872Pyridoxal-phosphate dependent enzyme
151419171715231314147NUDIX domain
44446635440pfkB family carbohydrate kinase
14191226197512105Glycosyl hydrolases family 28
22226622226Ribosomal protein L3
13222222218Ribosomal protein L11, RNA binding domain
71179101099779Histidine phosphatase superfamily (branch 1)
1111111119Thymidylate synthase
412455444446ATP synthase alpha/beta chain, C terminal domain
44464443437Calponin homology (CH) domain
55333535537Glutamine amidotransferases class-II
22222222218Ribosomal protein S15
83784251543Thaumatin family
1111111119Fructose-1-6-bisphosphatase, N-terminal domain
11111111210Ribonucleotide reductase, all-alpha domain
32993222234Ribosomal protein S2
13332213220SRF-type transcription factor (DNA-binding and dimerisation domain)
999910129121190GATA zinc finger
212081261532123129Amino acid permease
66586666655Prolyl oligopeptidase family
11222221114Ribosomal protein L30p/L7e
1081314988111091Histidine phosphatase superfamily (branch 2)
1111111119Respiratory-chain NADH dehydrogenase, 30 Kd subunit
74554454543Aconitase family (aconitate hydratase)
445511851043Glycosyl hydrolase family 10
1111111119Glycosyl hydrolases family 17
22222222218Ribosomal protein S5, N-terminal domain
22221222217Nucleoside diphosphate kinase
32446224128Tetraspanin family
22222221217Ribosomal protein S10p/S20e
35548743342Arrestin (or S-antigen), N-terminal domain
1111111119Phosphoglucose isomerase
1111111119Carbohydrate phosphorylase
11241111113SecY translocase
1111111119Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222222218Ribosomal protein L6
33334534533Polyprenyl synthetase
22225222221Hexokinase
7712121171311787Dynamin family
1111111119Transcription factor TFIID (or TATA-binding protein, TBP)
55573423539Rieske [2Fe-2S] domain
11Bacterial regulatory proteins, lacI family
11114Phytochrome region
33Proton-conducting membrane transporter
89910988101384Biotin-requiring enzyme
1111111119Phosphofructokinase
22223322220Ribosomal protein S17
11213411115Hydroxymethylglutaryl-coenzyme A reductase
44333443432FGGY family of carbohydrate kinases, N-terminal domain
11Hemocyanin, copper containing domain
12910111091091090Enoyl-CoA hydratase/isomerase
22222222218Ribosomal protein S9/S16
42222343224Transcription factor TFIIB repeat
58779877866Cytidine and deoxycytidylate deaminase zinc-binding region
21111111110Molybdopterin oxidoreductase
1151087129151087Chromo (CHRromatin Organisation MOdifier) domain
12222222419Phosphatidylinositol-specific phospholipase C, Y domain
14333232425Phosphatidylinositol-specific phospholipase C, X domain
67666667656D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
22222222218Malic enzyme, N-terminal domain
111111112106-phosphogluconate dehydrogenase, C-terminal domain
118771010761884Multicopper oxidase
9101010101089985WW domain
22222222218Ribosomal RNA adenine dimethylase
1901311611341791951661721511,479WD domain, G-beta repeat
33333333327Heavy-metal-associated domain
33333343328Adenylate kinase
22332221219Phosphoglucomutase/phosphomannomutase, C-terminal domain
11222122114Ribosomal protein S8
12322212116Ribosomal protein S11
75555566650LIM domain
11Matrixin
238117554550Regulator of chromosome condensation (RCC1) repeat
22222222218Ribosomal protein S13/S18
11
22222222218chorismate binding enzyme
3333482433360s Acidic ribosomal protein
54444744440Prenyltransferase and squalene oxidase repeat
77567757657Protein kinase C terminal domain
111111118Single-strand binding protein family
11Type II/IV secretion system protein
1111111119S-adenosylmethionine synthetase, N-terminal domain
12101211121111101099Bromodomain
8888121279981Acyl-CoA dehydrogenase, C-terminal domain
141419171516151515140Ubiquitin carboxyl-terminal hydrolase
111111118Ribosomal protein L36
4243223424Ribonuclease T2 family
44447953444HSF-type DNA-binding
22222222218SRP54-type protein, GTPase domain
11112211111Urease alpha-subunit, N-terminal domain
141413161316111919135Serine carboxypeptidase
8888101089877Phosphatidylinositol 3- and 4-kinase
1111111119Transketolase, thiamine diphosphate binding domain
11Glycosyl hydrolases family 11
11111117WHEP-TRS domain
32222222219Inositol monophosphatase family
44444444436Glutaredoxin
33222323323Isocitrate lyase family
111111118Serine hydroxymethyltransferase
33443343330Iron-containing alcohol dehydrogenase
11222212215Ribosomal protein L10
56555755548KOW motif
1111111119Ribosomal protein L34
1113Ribosomal protein L33
23444442431RF-1 domain
22322122420Sodium:solute symporter family
11111211110Imidazoleglycerol-phosphate dehydratase
1111111119DNA polymerase family A
14131111114IMP dehydrogenase / GMP reductase domain
1111111119Glucose-6-phosphate dehydrogenase, NAD binding domain
8888151389986Protein phosphatase 2C
43433832333Nucleotidyl transferase
23223344427Carbonic anhydrase
1111111119Phosphoribulokinase / Uridine kinase family
868610869970Fatty acid desaturase
66676666655MutS domain V
1111111119Delta-aminolevulinic acid dehydratase
34334533432Arginase family
676712666662MCM P-loop domain
113432121128Squalene/phytoene synthase
91011915131091096FHA domain
11NADH-ubiquinone/plastoquinone oxidoreductase chain 6
262935323327173144274AMP-binding enzyme
121213122017121513126G-protein alpha subunit
241722321418201727191HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
123Cytochrome c oxidase subunit III
5676121157867His Kinase A (phospho-acceptor) domain
22334524328Armadillo/beta-catenin-like repeat
632315142165153636288Tetratricopeptide repeat
34333333429Ion transport protein
1111111119DNA gyrase/topoisomerase IV, subunit A
985869671169BRCA1 C Terminus (BRCT) domain
58556756451Glycosyl transferases group 1
33234523631Glycosyl transferase family 2
1113SAM domain (Sterile alpha motif)
44353313329linker histone H1 and H5 family
111111118Ribosomal protein L7/L12 C-terminal domain
111126Pectate lyase
11111121110ribonuclease
1111111119Urease, gamma subunit
33333333327CoA-ligase
8101210131036880Phosphopantetheine attachment site
22222312218Formyl transferase
1091112121012101096Metallopeptidase family M24
1515333163161589Leucine Rich Repeat
49331111637134548253alpha/beta hydrolase fold
33433333328RNA polymerase Rpb2, domain 6
358105454448PB1 domain
22832222225Staphylococcal nuclease homologue
9912111210129993Rab-GTPase-TBC domain
1111111119Tudor domain
1111111119WH1 domain
34336634638Zinc finger, ZZ type
1111111119HRDC domain
885761068866CBS domain
22223222219Ribosomal protein L13
213232222230Ribosomal protein L4/L1 family
1111111119Clp protease
43434434433S1 RNA binding domain
111111129HIUase/Transthyretin family
45444445539AhpC/TSA family
44444444436tRNA synthetases class I (W and Y)
11114UvrD/REP helicase N-terminal domain
3399104114457Rhodanese-like domain
22222222218Universal stress protein family
282617152338153627225Acetyltransferase (GNAT) family
11111117SecE/Sec61-gamma subunits of protein translocation complex
1111111119C-terminal regulatory domain of Threonine dehydratase
22222222218AIR synthase related protein, N-terminal domain
66403357576115tRNA synthetase class II core domain (G, H, P, S and T)
52322222222Tetrapyrrole (Corrin/Porphyrin) Methylases
11121111110Glycosyl transferase family, a/b domain
436133216341Class II Aldolase and Adducin N-terminal domain
34445344334Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
55555555545Fes/CIP4, and EFC/F-BAR homology domain
35333626536IQ calmodulin-binding motif
22222222218Phosphoinositide 3-kinase family, accessory domain (PIK domain)
33113424425Phospholipase D Active site motif
11433131118Regulator of G protein signaling domain
44445545439GTPase-activator protein for Ras-like GTPase
699101114813888RasGEF domain
7777812510871RasGEF N-terminal motif
141313131817111312124RhoGAP domain
121417171816151413136RhoGEF domain
43454445639SPRY domain
334114633340RNA polymerase Rpb1, domain 2
1111221110Guanylate kinase
23334345229Gelsolin repeat
8768512810771UBA/TS-N domain
151915171819151918155PHD-finger
2222222216GGL domain
55565555546HECT-domain (ubiquitin-transferase)
22111212214Helix-hairpin-helix motif
11114411115MSP (Major sperm protein) domain
46334536640Ribonuclease III domain
22447252230Region in Clathrin and VPS
13334333326RanBP1 domain
22213622222PPIC-type PPIASE domain
11Phosphotyrosine interaction domain (PTB/PID)
312323317Zn-finger in Ran binding protein and others
20221213132392120153Zinc finger C-x8-C-x5-C-x3-H type (and similar)
111115B-box zinc finger
14114435528Poly(ADP-ribose) polymerase catalytic domain
13223222219Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
849521232821113325181981F-box domain
11114311114Elongation factor 1 gamma, conserved domain
23222332423Calpain family cysteine protease
12221222216Copper fist DNA binding domain
667810766763CRAL/TRIO domain
1311415213458186929425BTB/POZ domain
3211133216Ricin-type beta-trefoil lectin domain
11121111110Inhibitor of Apoptosis domain
33333333327Voltage gated chloride channel
77912151712815102Caspase domain
848981667773GDSL-like Lipase/Acylhydrolase
11112121111Poly-adenylate binding protein, unique domain
1111111119POLO box duplicated region
192023263031202225216ABC transporter transmembrane region
325Integrase core domain
44445546541FAD binding domain
11113311113Condensation domain
1111111119S-adenosyl-L-homocysteine hydrolase, NAD binding domain
11111211211HAMP domain
22223322220ribosomal L5P family C-terminus
238667566673Insulinase (Peptidase family M16)
45444444538Dehydrogenase E1 component
1111111119Lumazine binding domain
666681067762Elongation factor G C-terminus
44457544441HMGL-like
34444444435DnaJ central domain
23334432428Starch binding domain
22334332224Ribosomal protein L1p/L10e family
65438685449Cation transporting ATPase, C-terminus
76448786555Cation transporter/ATPase, N-terminus
1111111119dUTPase
75554454544Aconitase C-terminal domain
33334333328Amino acid kinase family
11111121110N-(5'phosphoribosyl)anthranilate (PRA) isomerase
57656612644Acyl transferase domain
1111111119Urease beta subunit
32223322221Dihydrodipicolinate synthetase family
262310101528132827180haloacid dehalogenase-like hydrolase
11223221