PFAM Domains • Mycena alexandri CBHHK200 v1.0
Annotations/GenomesMyc59_1Mycale1Mycbel1Myccro1Mycepi1Mycgal1Mychae1Mycros1Mycrub1Mycvit1Panst_KUC8834_1_1Panst_LUM_1_1TotalAnnotation Description
PFAMs
15,27416,13211,57815,95718,56021,25511,85015,70518,17515,5058,99311,489180,473
11247 transmembrane receptor (rhodopsin family)
2137 transmembrane receptor (Secretin family)
816949586777495364575154729ATPase family associated with various cellular activities (AAA)
838757721031156189124825356982ABC transporter
45453444554552ATP synthase alpha/beta family, nucleotide-binding domain
22EGF-like domain
222118171920172022191721233Elongation factor Tu GTP binding domain
212115162023171718211415218Helix-loop-helix DNA-binding domain
1410812111010111015119131Hsp20/alpha crystallin family
101491414131214211388150Hsp70 protein
810108888881788109KH domain
11SH2 domain
161717151933201824212917246SH3 domain
161812161622151821141319200Actin
1657183792160157285294210633Ankyrin repeat
2131411PAN domain
1415101616149171511810155ADP-ribosylation factor family
5366406292119496891703334777Eukaryotic aspartyl protease
33333433333438Cyclic nucleotide-binding domain
22Cytochrome b/b6/petB
1122322212321Cytochrome c
5105681357877586Double-stranded RNA binding motif
222233323217142EF hand
334Fe-4S binding domain
11114Fibronectin type III domain
242534345054183140331310366Glutathione S-transferase, C-terminal domain
11111111211113Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
112Hemopexin
13101211141391113101111138Homeodomain
11Laminin EGF domain
22222212232224lactate/malate dehydrogenase, NAD binding domain
6896139675125692Myosin head (motor domain)
2392311702914205441583324592721251503,391Cytochrome P450
3943122533623844552533083433711852103,830Protein kinase domain
161614211821151619221916213Pyridine nucleotide-disulphide oxidoreductase
495330424689435470403135582Ras family
12191610162412131619109176Response regulator receiver domain
385510934648304746322829502RNase H
1017567856680636962666758859RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
112Reverse transcriptase (RNA-dependent DNA polymerase)
1111111111111Copper/zinc superoxide dismutase (SODC)
44333322223334Iron/manganese superoxide dismutases, alpha-hairpin domain
33483243577730506640527508Subtilase family
646653658094567771553945765Sugar (and other) transporter
121815141416131516131315174Thioredoxin
9101178108810777102Tubulin/FtsZ family, GTPase domain
134von Willebrand factor type A domain
11WAP-type (Whey Acidic Protein) 'four-disulfide core'
324837515041313450536835530Zinc finger, C2H2 type
25341538172012126397111300Zinc finger, C3HC4 type (RING finger)
172423233129253221191711272Zinc knuckle
43222322312228Protein-tyrosine phosphatase
1431941162652632791202032642401231442,354short chain dehydrogenase
4550488284105357693925256818Zinc-binding dehydrogenase
55565555454458Thiolase, N-terminal domain
794811389101115810140Beta-ketoacyl synthase, N-terminal domain
33222222222242Fe-2S iron-sulfur cluster binding domain
112Papain family cysteine protease
11111221111114Enolase, C-terminal TIM barrel domain
98888137881189105Glutamine amidotransferase class-I
10111010101091111101111124TCP-1/cpn60 chaperonin family
64443543645755Glutamine synthetase, catalytic domain
22111111121115Triosephosphate isomerase
222917212227171920191819250E1-E2 ATPase
383623383549243438381920392Core histone H2A/H2B/H3/H4
11114Copper binding proteins, plastocyanin/azurin family
12151514201571517161314173Alpha amylase, catalytic domain
54547545447458Phorbol esters/diacylglycerol binding domain (C1 domain)
56787667454267Bacterial transferase hexapeptide (six repeats)
64754444573457tRNA synthetases class I (I, L, M and V)
142128251216151416222314220Cyclin, N-terminal domain
5977277313811754104115694449926Carboxylesterase family
45454444444450DNA polymerase family B
23333333333436ATP synthase subunit C
253416246968103291391214434Peroxidase
202692128481329352188266Beta-lactamase
610597866564476C-5 cytosine-specific DNA methylase
353831374346263039333733428Calcineurin-like phosphoesterase
263022253138242529261622314Cellulase (glycosyl hydrolase family 5)
55557656656566tRNA synthetases class II (D, K and N)
444437504246414147424044518Mitochondrial carrier protein
222416212228172021231721252Aminotransferase class I and II
44444443335345Phosphoribosyl transferase domain
151412151922121414131313176Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11111111111112Phosphoglycerate kinase
22223222222225Ribosomal protein S4/S9 N-terminal domain
22222222222224Ribosomal protein S12/S23
11111111111213Chaperonin 10 Kd subunit
232117173436181825161614255C2 domain
796991098139226117PH domain
2512121411141510151158152bZIP transcription factor
182525242356182222231718291Aldehyde dehydrogenase family
112157951841842101101451761781371181,806Fungal Zn(2)-Cys(6) binuclear cluster domain
212623252825212728262423297Cytochrome b5-like Heme/Steroid binding domain
21233112431124Oxidoreductase molybdopterin binding domain
8119131515111413141011144Oxidoreductase NAD-binding domain
303525272830252827312730343SNF2 family N-terminal domain
22132222242226Ribosomal protein S7p/S5e
283125282638252831272322332Ubiquitin-conjugating enzyme
77966665677678Isocitrate/isopropylmalate dehydrogenase
24222222222226Ribosomal Proteins L2, RNA binding domain
24322222232228Hsp90 protein
22222322232226Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111211111113Dihydrofolate reductase
24512321121Chitin recognition protein
84223522642242Cysteine-rich secretory protein family
11111111311114Ribosomal protein S3, C-terminal domain
8179122711516161068145Cupin
11111222121116Annexin
112214314Eukaryotic-type carbonic anhydrase
21223611311124Chalcone and stilbene synthases, N-terminal domain
533434433433422-oxoacid dehydrogenases acyltransferase (catalytic domain)
37155677553458Catalase
11111111121113Disintegrin
71110172316320191115143UDP-glucoronosyl and UDP-glucosyl transferase
6967710688971093Aminotransferase class-III
22222222422226Ribosomal protein S19
1211111111112DNA gyrase B
44534746744456Thiamine pyrophosphate enzyme, central domain
32334333443338Lyase
21222222622227Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
23122322322327Adenylate and Guanylate cyclase catalytic domain
21111111111113ATP synthase delta (OSCP) subunit
11111112111113Orotidine 5'-phosphate decarboxylase / HUMPS family
11111111221114Indole-3-glycerol phosphate synthase
42342334335541Aromatic amino acid lyase
11121111111113Pyruvate kinase, barrel domain
16121113101181312141210142Kinesin motor domain
323533353235303335332929391DnaJ domain
161714201618141816181618201Proteasome subunit
71136111058776788Major intrinsic protein
11212112111115ATP synthase
33343543333542Glycosyl hydrolase family 1
211412111111173'5'-cyclic nucleotide phosphodiesterase
21111111111113Profilin
22222322221224Ribosomal protein L22p/L17e
22293633232239Ribosomal protein L14p/L23e
131618162720152023211517221Ubiquitin family
46555746555562Cofilin/tropomyosin-type actin-binding protein
1111232222111914-3-3 protein
22Alkaline phosphatase
2212131113219Zinc carboxypeptidase
7773568610011066881091006060985Aldo/keto reductase family
81387978878146103Myb-like DNA-binding domain
2499187118871069126Forkhead domain
11211111111113Glycosyl hydrolases family 32 N-terminal domain
32222212221223Ribosomal protein L16p/L10e
22222232222326Ribosomal protein S14p/S29e
43464334353345FKBP-type peptidyl-prolyl cis-trans isomerase
1112111111112Glutathione peroxidase
11
5947131181281277103Flavodoxin
123Tropomyosin
11111112111113Calreticulin family
4656674111082372Common central domain of tyrosinase
912121012141210131478133Aminotransferase class-V
442922072242260Ribonucleotide reductase, small chain
22699821251101557314310710160721,353DEAD/DEAH box helicase
1951221011401271739112712013198931,518Helicase conserved C-terminal domain
11111511121117EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22122235222227Ribosomal protein L23
11121223222322Pyridoxal-dependent decarboxylase, C-terminal sheet domain
2111111111112Ribosomal protein L5
6126766613866789Pyridoxal-dependent decarboxylase conserved domain
94444444743556Citrate synthase, C-terminal domain
55557656555665GHMP kinases N terminal domain
56676966776677Biotin carboxylase, N-terminal domain
11111111111112Tryptophan synthase alpha chain
141112109138101381010128Pyridoxal-phosphate dependent enzyme
21418'Paired box' domain
171514151517141614171313180NUDIX domain
55545545556660pfkB family carbohydrate kinase
37288122729821251389225Glycosyl hydrolases family 28
11Luciferase-like monooxygenase
28222432222233Ribosomal protein L3
22222222222224Ribosomal protein L11, RNA binding domain
12991110111110101087118Histidine phosphatase superfamily (branch 1)
12211112111115Thymidylate synthase
11Lipoxygenase
45453544544552ATP synthase alpha/beta chain, C terminal domain
46665666567770Calponin homology (CH) domain
32232322225230Glutamine amidotransferases class-II
12222222222223Ribosomal protein S15
11125121227148181269146Thaumatin family
11111111111112Fructose-1-6-bisphosphatase, N-terminal domain
35384634385658Ribonucleotide reductase, all-alpha domain
22222222522227Ribosomal protein S2
33334332463441SRF-type transcription factor (DNA-binding and dimerisation domain)
383018414052162342252731383GATA zinc finger
16141213131312121618249172Amino acid permease
1313101613148151414811149Prolyl oligopeptidase family
22323223231227Ribosomal protein L30p/L7e
141010141414111514141311154Histidine phosphatase superfamily (branch 2)
11111111111112Respiratory-chain NADH dehydrogenase, 30 Kd subunit
55455545555659Aconitase family (aconitate hydratase)
876781064765478Glycosyl hydrolase family 10
24333123222229Glycosyl hydrolases family 17
22222221222122Ribosomal protein S5, N-terminal domain
22222222222224Nucleoside diphosphate kinase
107567669775681Tetraspanin family
213Galactoside-binding lectin
22222223422227Ribosomal protein S10p/S20e
9181091720812181295147Arrestin (or S-antigen), N-terminal domain
11111111111112Phosphoglucose isomerase
141214131111232Carbohydrate phosphorylase
11113112111216SecY translocase
11111111131114Respiratory-chain NADH dehydrogenase, 49 Kd subunit
12222222222122Ribosomal protein L6
10537513481053376Polyprenyl synthetase
25322422622335Hexokinase
2519111216211313141559173Dynamin family
12111121112115Transcription factor TFIID (or TATA-binding protein, TBP)
43333523634342Rieske [2Fe-2S] domain
22112111112Phytochrome region
988971087888898Biotin-requiring enzyme
11111111111112Phosphofructokinase
22222221222223Ribosomal protein S17
11222212111117Hydroxymethylglutaryl-coenzyme A reductase
34343333333338FGGY family of carbohydrate kinases, N-terminal domain
9141013171715172013911165Enoyl-CoA hydratase/isomerase
12223222222224Ribosomal protein S9/S16
22222222232225Transcription factor TFIIB repeat
99781089710788100Cytidine and deoxycytidylate deaminase zinc-binding region
1111111111111Molybdopterin oxidoreductase
24131114101912161217177172Chromo (CHRromatin Organisation MOdifier) domain
33333335333338Phosphatidylinositol-specific phospholipase C, Y domain
86676767663472Phosphatidylinositol-specific phospholipase C, X domain
7887128671087593D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
23232222222226Malic enzyme, N-terminal domain
111111122211156-phosphogluconate dehydrogenase, C-terminal domain
333918355238123244251112351Multicopper oxidase
88710710877610997WW domain
32323222222227Ribosomal RNA adenine dimethylase
2001631321602091821361602141611251331,975WD domain, G-beta repeat
63334434432241Heavy-metal-associated domain
43333333333337Adenylate kinase
23233323322331Phosphoglucomutase/phosphomannomutase, C-terminal domain
32322222221326Ribosomal protein S8
25233222223331Ribosomal protein S11
66676667766675LIM domain
11Matrixin
55456645663358Regulator of chromosome condensation (RCC1) repeat
22222222222224Ribosomal protein S13/S18
22222222222224chorismate binding enzyme
5454534544455260s Acidic ribosomal protein
65465565765666Prenyltransferase and squalene oxidase repeat
56565654558565Protein kinase C terminal domain
11111111111112Single-strand binding protein family
11Type II/IV secretion system protein
11111111111112S-adenosylmethionine synthetase, N-terminal domain
231711151324121716131110182Bromodomain
111212131813101313131113152Acyl-CoA dehydrogenase, C-terminal domain
182018161619161421162120215Ubiquitin carboxyl-terminal hydrolase
111111118Ribosomal protein L36
544361166655566Ribonuclease T2 family
55546744794464HSF-type DNA-binding
32222222222225SRP54-type protein, GTPase domain
21111111111113Urease alpha-subunit, N-terminal domain
384917265444295064222328444Serine carboxypeptidase
9111091199910999114Phosphatidylinositol 3- and 4-kinase
42223224222229Transketolase, thiamine diphosphate binding domain
35227967725661Glycosyl hydrolases family 11
111115WHEP-TRS domain
44323323432235Inositol monophosphatase family
56457745654765Glutaredoxin
43223223235233Isocitrate lyase family
21221111111216Serine hydroxymethyltransferase
333211756664561Iron-containing alcohol dehydrogenase
22223322232227Ribosomal protein L10
56576545745665KOW motif
1111111111111Ribosomal protein L34
1111111111111Ribosomal protein L33
33333333332335RF-1 domain
33334114423435Sodium:solute symporter family
11111111111112Imidazoleglycerol-phosphate dehydratase
11111111111112DNA polymerase family A
11112112121115IMP dehydrogenase / GMP reductase domain
22222222222224Glucose-6-phosphate dehydrogenase, NAD binding domain
311711152114161419181616208Protein phosphatase 2C
33333333332335Nucleotidyl transferase
4746121265973378Carbonic anhydrase
11111111111112Phosphoribulokinase / Uridine kinase family
151611192216151321181315194Fatty acid desaturase
66666666676774MutS domain V
11111111111112Delta-aminolevulinic acid dehydratase
54556546844460Arginase family
66667975666777MCM P-loop domain
22322333221227Squalene/phytoene synthase
192218432128152119161617255FHA domain
6967548480113467682764349839AMP-binding enzyme
414425234568323242282929438G-protein alpha subunit
222822292725272126232120291HMG (high mobility group) box
913101010146981366114His Kinase A (phospho-acceptor) domain
111158115110735582Armadillo/beta-catenin-like repeat
251917152624122118173016240Tetratricopeptide repeat
43333643443545Ion transport protein
1211111111112DNA gyrase/topoisomerase IV, subunit A
69977107998129102BRCA1 C Terminus (BRCT) domain
7656616351188788Glycosyl transferases group 1
65244424534346Glycosyl transferase family 2
11111221212125SAM domain (Sterile alpha motif)
86454454655359linker histone H1 and H5 family
1111111111111Ribosomal protein L7/L12 C-terminal domain
32255736336Pectate lyase
212111223520ribonuclease
21111111111113Urease, gamma subunit
34444434354547CoA-ligase
15171114253111182117811199Phosphopantetheine attachment site
22222223221224Formyl transferase
131412111216151314151011156Metallopeptidase family M24
45226125112343Leucine Rich Repeat
323321223649223939225319387alpha/beta hydrolase fold
33343433332337RNA polymerase Rpb2, domain 6
9955111156954584PB1 domain
22222222222224Staphylococcal nuclease homologue
121412121214121213141013150Rab-GTPase-TBC domain
11111111111112Tudor domain
22122222331224WH1 domain
1554976310873481Zinc finger, ZZ type
1121111111112HRDC domain
710710101171099108108CBS domain
22222222222224Ribosomal protein L13
322223222222