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PFAM Domains • Acremonium alcalophilum v2.0
Annotations/GenomesAcral1_c3aAcral2Chagl_1Necha2Spoth2Thite2Triat1Trire2TriviGv29_8_2TotalAnnotation Description
PFAMs
6,5956,7187,86510,1426,9517,3377,3786,5079,84469,337
111147 transmembrane receptor (rhodopsin family)
117 transmembrane receptor (Secretin family)
383746534143494449400ATPase family associated with various cellular activities (AAA)
343442763836474662415ABC transporter
44444444436ATP synthase alpha/beta family, nucleotide-binding domain
141414141414141414126Elongation factor Tu GTP binding domain
99111213131091096Helix-loop-helix DNA-binding domain
22333323526Hsp20/alpha crystallin family
77979877869Hsp70 protein
89888988975KH domain
112Ribulose bisphosphate carboxylase large chain, catalytic domain
1111111119SH2 domain
222323232123242422205SH3 domain
10109791077978Actin
22309813129419063171675Ankyrin repeat
1117132429PAN domain
77887777765ADP-ribosylation factor family
8818181622201621147Eukaryotic aspartyl protease
44344444435Cyclic nucleotide-binding domain
1111111119Cytochrome c
221132112Double-stranded RNA binding motif
171817211720232018171EF hand
11111111194Fe-4S binding domain
22332211218Fibronectin type III domain
22222122217Globin
1010101889131027115Glutathione S-transferase, C-terminal domain
22111111212Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
5561256851163Homeodomain
33334332327lactate/malate dehydrogenase, NAD binding domain
55555444542Myosin head (motor domain)
48528314252596369118686Cytochrome P450
1141151171491171341101061261,088Protein kinase domain
101016241213151425139Pyridine nucleotide-disulphide oxidoreductase
212123252424222325208Ras family
121212151111151314115Response regulator receiver domain
23363122527RNase H
575861585862565957526RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
110741113Reverse transcriptase (RNA-dependent DNA polymerase)
11331322218Copper/zinc superoxide dismutase (SODC)
33222222321Iron/manganese superoxide dismutases, alpha-hairpin domain
771329810381529156Subtilase family
29294724742421007686698Sugar (and other) transporter
111111141112111114106Thioredoxin
11131111212Trypsin
44374456542Tubulin/FtsZ family, GTPase domain
33532232427von Willebrand factor type A domain
4750511245360826763597Zinc finger, C2H2 type
363732384140303238324Zinc finger, C3HC4 type (RING finger)
36476137659102Zinc knuckle
22222232219Protein-tyrosine phosphatase
56578425956941571181811,062short chain dehydrogenase
3737511553242915392590Zinc-binding dehydrogenase
55585566550Thiolase, N-terminal domain
161629151819221726178Beta-ketoacyl synthase, N-terminal domain
555655555462Fe-2S iron-sulfur cluster binding domain
1113Papain family cysteine protease
11121121212Enolase, C-terminal TIM barrel domain
71210Cytochrome C and Quinol oxidase polypeptide I
6891298771076Glutamine amidotransferase class-I
1010109101010101089TCP-1/cpn60 chaperonin family
33444422430Glutamine synthetase, catalytic domain
22222222218Triosephosphate isomerase
191913281412151619155E1-E2 ATPase
99788977973Core histone H2A/H2B/H3/H4
33788444546Alpha amylase, catalytic domain
22222212217Phorbol esters/diacylglycerol binding domain (C1 domain)
798987981277Bacterial transferase hexapeptide (six repeats)
44573486445tRNA synthetases class I (I, L, M and V)
665125787965Cyclin, N-terminal domain
221845914181228148Carboxylesterase family
44444444436DNA polymerase family B
44555564442ATP synthase subunit C
44344466742Peroxidase
11355617818100Beta-lactamase
33223321221C-5 cytosine-specific DNA methylase
252624312429292732247Calcineurin-like phosphoesterase
33814813841071Cellulase (glycosyl hydrolase family 5)
77777888867tRNA synthetases class II (D, K and N)
353636473735363538335Mitochondrial carrier protein
11recA bacterial DNA recombination protein
151513251212171629154Aminotransferase class I and II
88912810108881Phosphoribosyl transferase domain
10101010101010101090Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111111119Phosphoglycerate kinase
22222222218Ribosomal protein S4/S9 N-terminal domain
22221222318Ribosomal protein S12/S23
113128Bacterial regulatory helix-turn-helix proteins, AraC family
1111111119Chaperonin 10 Kd subunit
111113161311121413114C2 domain
161714171715181917150PH domain
11117118911111493bZIP transcription factor
111112651315242031202Aldehyde dehydrogenase family
80871064781011222701923101,746Fungal Zn(2)-Cys(6) binuclear cluster domain
222418352122232125211Cytochrome b5-like Heme/Steroid binding domain
22252224425Oxidoreductase molybdopterin binding domain
121214251314151423142Oxidoreductase NAD-binding domain
222229332326282527235SNF2 family N-terminal domain
22222222218Ribosomal protein S7p/S5e
192020202020192020178Ubiquitin-conjugating enzyme
55695577857Isocitrate/isopropylmalate dehydrogenase
2222222216Ribosomal Proteins L2, RNA binding domain
1111111119Hsp90 protein
22222212217Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
111111118Dihydrofolate reductase
557122362547Chitin recognition protein
11141133318Cysteine-rich secretory protein family
1111111119Ribosomal protein S3, C-terminal domain
362153424Cupin
33333232224Annexin
11121111110Eukaryotic-type carbonic anhydrase
2212119Chalcone and stilbene synthases, N-terminal domain
333433334292-oxoacid dehydrogenases acyltransferase (catalytic domain)
22382177739Catalase
11131111111Disintegrin
211127UDP-glucoronosyl and UDP-glucosyl transferase
7771967881079Aminotransferase class-III
22222222218Ribosomal protein S19
1111111119DNA gyrase B
335104374948Thiamine pyrophosphate enzyme, central domain
33253333328Lyase
22222222218Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
2237Sodium:neurotransmitter symporter family
1111111119Adenylate and Guanylate cyclase catalytic domain
1111111119ATP synthase delta (OSCP) subunit
1111111119Orotidine 5'-phosphate decarboxylase / HUMPS family
1111111119Indole-3-glycerol phosphate synthase
1111116Aromatic amino acid lyase
11112111110Pyruvate kinase, barrel domain
1010111110109111092Kinesin motor domain
242525282426262625229DnaJ domain
141413141314141414124Proteasome subunit
22151167833Major intrinsic protein
1111111119ATP synthase
11151142218Glycosyl hydrolase family 1
11111111193'5'-cyclic nucleotide phosphodiesterase
1111111119Profilin
1111111119Ribosomal protein L22p/L17e
22222222218Ribosomal protein L14p/L23e
121210111181081294Ubiquitin family
55333433534Cofilin/tropomyosin-type actin-binding protein
2222222231914-3-3 protein
33554223330Alkaline phosphatase
66373244439Zinc carboxypeptidase
151718541423352745248Aldo/keto reductase family
121317121716141415130Myb-like DNA-binding domain
44444444436Forkhead domain
3611112Glycosyl hydrolases family 32 N-terminal domain
111111118Ribosomal protein L16p/L10e
22212211215Ribosomal protein S14p/S29e
33334433329FKBP-type peptidyl-prolyl cis-trans isomerase
1111111119Glutathione peroxidase
22122212216
556136677863Flavodoxin
11Protamine P1
1111111119Calreticulin family
4414591032455Common central domain of tyrosinase
66758743854Aminotransferase class-V
1111111119Ribonucleotide reductase, small chain
383946563938454936386DEAD/DEAH box helicase
667185877273747573676Helicase conserved C-terminal domain
1111111119EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22222212217Ribosomal protein L23
11112111110Pyridoxal-dependent decarboxylase, C-terminal sheet domain
11222222216Ribosomal protein L5
335105586752Pyridoxal-dependent decarboxylase conserved domain
22232222219Citrate synthase, C-terminal domain
55556555546GHMP kinases N terminal domain
55495565751Biotin carboxylase, N-terminal domain
1111111119Tryptophan synthase alpha chain
1010923108121215109Pyridoxal-phosphate dependent enzyme
141613181314191522144NUDIX domain
34746534541pfkB family carbohydrate kinase
11192764637Glycosyl hydrolases family 28
1113Luciferase-like monooxygenase
22222222218Ribosomal protein L3
22222222218Ribosomal protein L11, RNA binding domain
111113131112761296Histidine phosphatase superfamily (branch 1)
1111111119Thymidylate synthase
122117Lipoxygenase
44444444436ATP synthase alpha/beta chain, C terminal domain
55455555544Calponin homology (CH) domain
66544444643Glutamine amidotransferases class-II
22222122217Ribosomal protein S15
1113Thaumatin family
22221122216Fructose-1-6-bisphosphatase, N-terminal domain
1111111119Ribonucleotide reductase, all-alpha domain
22222222218Ribosomal protein S2
22222222218SRF-type transcription factor (DNA-binding and dimerisation domain)
78486866861GATA zinc finger
161718871921333336280Amino acid permease
33463221529Prolyl oligopeptidase family
22112222216Ribosomal protein L30p/L7e
33586444845Histidine phosphatase superfamily (branch 2)
1111111119Respiratory-chain NADH dehydrogenase, 30 Kd subunit
44684464646Aconitase family (aconitate hydratase)
33734611230Glycosyl hydrolase family 10
33122211318Glycosyl hydrolases family 17
22222212217Ribosomal protein S5, N-terminal domain
1111111119Nucleoside diphosphate kinase
11221111111Ribosomal protein S10p/S20e
33354423229Arrestin (or S-antigen), N-terminal domain
1111111119Phosphoglucose isomerase
1111111119Carbohydrate phosphorylase
1111111119SecY translocase
1111111119Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22221222217Ribosomal protein L6
33434433330Polyprenyl synthetase
33444444535Hexokinase
889988991179Dynamin family
11212211112Transcription factor TFIID (or TATA-binding protein, TBP)
453144434445Rieske [2Fe-2S] domain
325Proton-conducting membrane transporter
777976861067Biotin-requiring enzyme
1111111119Phosphofructokinase
22222222218Ribosomal protein S17
1111111119Hydroxymethylglutaryl-coenzyme A reductase
44343333330FGGY family of carbohydrate kinases, N-terminal domain
11114Sodium:dicarboxylate symporter family
101072387141218109Enoyl-CoA hydratase/isomerase
22222222218Ribosomal protein S9/S16
22222222218Transcription factor TFIIB repeat
55688676657Cytidine and deoxycytidylate deaminase zinc-binding region
11211211111Molybdopterin oxidoreductase
772847731973Chromo (CHRromatin Organisation MOdifier) domain
23473344434Phosphatidylinositol-specific phospholipase C, Y domain
44493356644Phosphatidylinositol-specific phospholipase C, X domain
6661467951271D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
22222222218Malic enzyme, N-terminal domain
1113PEP-utilising enzyme, mobile domain
111112211116-phosphogluconate dehydrogenase, C-terminal domain
34812611108971Multicopper oxidase
12129119911101093WW domain
1111111119Ribosomal RNA adenine dimethylase
11Yeast PIR protein repeat
1011041131261061081391231481,068WD domain, G-beta repeat
55484555546Heavy-metal-associated domain
33343434330Adenylate kinase
22122122216Phosphoglucomutase/phosphomannomutase, C-terminal domain
11222112214Ribosomal protein S8
11121211111Ribosomal protein S11
44454444437LIM domain
55Matrixin
12222321116Regulator of chromosome condensation (RCC1) repeat
22221222217Ribosomal protein S13/S18
22222222218chorismate binding enzyme
3333333332760s Acidic ribosomal protein
44554434437Prenyltransferase and squalene oxidase repeat
66646555851Protein kinase C terminal domain
1111111119Single-strand binding protein family
1111111119S-adenosylmethionine synthetase, N-terminal domain
88887877768Bromodomain
8881478981080Acyl-CoA dehydrogenase, C-terminal domain
141414151414141514128Ubiquitin carboxyl-terminal hydrolase
111115Ribosomal protein L36
112143517Ribonuclease T2 family
33233333427HSF-type DNA-binding
22222222218SRP54-type protein, GTPase domain
111111118Urease alpha-subunit, N-terminal domain
556175565761Serine carboxypeptidase
88889888873Phosphatidylinositol 3- and 4-kinase
11151122216Transketolase, thiamine diphosphate binding domain
66938543448Glycosyl hydrolases family 11
33556544540Inositol monophosphatase family
44433333431Glutaredoxin
22242222422Isocitrate lyase family
22332222220Serine hydroxymethyltransferase
11161122318Iron-containing alcohol dehydrogenase
22122222217Ribosomal protein L10
33363256334KOW motif
112Ribosomal protein L34
33122322321RF-1 domain
33163345533Sodium:solute symporter family
111111118Imidazoleglycerol-phosphate dehydratase
1111111119DNA polymerase family A
1111111119IMP dehydrogenase / GMP reductase domain
1111111119Glucose-6-phosphate dehydrogenase, NAD binding domain
55676566753Protein phosphatase 2C
22222233321Nucleotidyl transferase
333434841042Carbonic anhydrase
11111112110Phosphoribulokinase / Uridine kinase family
55685576653Fatty acid desaturase
66666666654MutS domain V
1111111119Delta-aminolevulinic acid dehydratase
22151133422Arginase family
66666666654MCM P-loop domain
11121111110Squalene/phytoene synthase
81199810981284FHA domain
11NADH-ubiquinone/plastoquinone oxidoreductase chain 6
383945503127473764378AMP-binding enzyme
33343433329G-protein alpha subunit
88116109771076HMG (high mobility group) box
112NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
11Cytochrome c oxidase subunit III
888118812101184His Kinase A (phospho-acceptor) domain
33233333326Armadillo/beta-catenin-like repeat
202027252124372440238Tetratricopeptide repeat
33232435429Ion transport protein
1111111119DNA gyrase/topoisomerase IV, subunit A
998101079111184BRCA1 C Terminus (BRCT) domain
66877656657Glycosyl transferases group 1
55393333337Glycosyl transferase family 2
1141233116SAM domain (Sterile alpha motif)
1111111119linker histone H1 and H5 family
1111111119Ribosomal protein L7/L12 C-terminal domain
226125128Pectate lyase
22212121215ribonuclease
111111118Urease, gamma subunit
33444355536CoA-ligase
202125191617291943209Phosphopantetheine attachment site
44333233328Formyl transferase
6681188981074Metallopeptidase family M24
151411141615161613130Leucine Rich Repeat
202126412526372277295alpha/beta hydrolase fold
33333333327RNA polymerase Rpb2, domain 6
44444444436PB1 domain
22222222218Staphylococcal nuclease homologue
111191091010101090Rab-GTPase-TBC domain
1111111119Tudor domain
12111111110WH1 domain
33163345331Zinc finger, ZZ type
11112211111HRDC domain
99788989976CBS domain
22221222217Ribosomal protein L13
22222222218Ribosomal protein L4/L1 family
1111111119Clp protease
45233335533S1 RNA binding domain
1111111119HIUase/Transthyretin family
22252243426AhpC/TSA family
44444444436tRNA synthetases class I (W and Y)
111115UvrD/REP helicase N-terminal domain
55465664849Rhodanese-like domain
22222222218Universal stress protein family
212322612831484065339Acetyltransferase (GNAT) family
111111118SecE/Sec61-gamma subunits of protein translocation complex
1111111119C-terminal regulatory domain of Threonine dehydratase
22222222218AIR synthase related protein, N-terminal domain
889981088977tRNA synthetase class II core domain (G, H, P, S and T)
1111111119SpoU rRNA Methylase family
22222222218Tetrapyrrole (Corrin/Porphyrin) Methylases
111111118Glycosyl transferase family, a/b domain
2112118PDZ domain
221122243331Class II Aldolase and Adducin N-terminal domain
34444444435Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
44434533535Fes/CIP4, and EFC/F-BAR homology domain
67545465547IQ calmodulin-binding motif
22222222218Phosphoinositide 3-kinase family, accessory domain (PIK domain)
34556665545Phospholipase D Active site motif
11121111110Regulator of G protein signaling domain
44444444436GTPase-activator protein for Ras-like GTPase
44444434435RasGEF domain
44424432431RasGEF N-terminal motif
88109101088879RhoGAP domain
66556655650RhoGEF domain
33333543330SPRY domain
33333333327RNA polymerase Rpb1, domain 2
33233223324Guanylate kinase
33543444434Gelsolin repeat
888611987974UBA/TS-N domain
141414161615171519140PHD-finger
111111118GGL domain
66666566653HECT-domain (ubiquitin-transferase)
11223232117Helix-hairpin-helix motif
1111111119MSP (Major sperm protein) domain
33335434533Ribonuclease III domain
33213322322Region in Clathrin and VPS
33323333326RanBP1 domain
22121222216PPIC-type PPIASE domain
23222332322Zn-finger in Ran binding protein and others
141515191217151516138Zinc finger C-x8-C-x5-C-x3-H type (and similar)
22212211316Poly(ADP-ribose) polymerase catalytic domain
1111116Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
3436431213946695161500F-box domain
1111111119Elongation factor 1 gamma, conserved domain
22252333426Calpain family cysteine protease
113222213Copper fist DNA binding domain
54666655649CRAL/TRIO domain
557895251056BTB/POZ domain
11112254421Ricin-type beta-trefoil lectin domain
22111111111Inhibitor of Apoptosis domain
33333333327Voltage gated chloride channel
22342232424Caspase domain
771621111085893GDSL-like Lipase/Acylhydrolase
1111111119Poly-adenylate binding protein, unique domain
161620392019252536216ABC transporter transmembrane region
13611140Integrase core domain
555125566756FAD binding domain
10101510104181029116Condensation domain
1111111119S-adenosyl-L-homocysteine hydrolase, NAD binding domain
1111111119HAMP domain
22222222218ribosomal L5P family C-terminus
55554655545Insulinase (Peptidase family M16)
33353333430Dehydrogenase E1 component
1111111119Lumazine binding domain
66566555650Elongation factor G C-terminus
55564444542HMGL-like
44444444436DnaJ central domain
22222331118Starch binding domain
22122232218Ribosomal protein L1p/L10e family
111191886891191Cation transporting ATPase, C-terminus
11111017977101395Cation transporter/ATPase, N-terminus
11211111211dUTPase
44684464646Aconitase C-terminal domain
33343343430Amino acid kinase family
1111111119N-(5'phosphoribosyl)anthranilate (PRA) isomerase
161627151516221726170Acyl transferase domain
111111118Urease beta subunit
553133576754Dihydrodipicolinate synthetase family
303030503030323140303haloacid dehalogenase-like hydrolase
5561178871067Glycosyl hydrolases family 2
1414172381328