PFAM Domains • Abortiporus biennis CCBS 521 v1.0
Annotations/GenomesAbobi1Abobie1Cerun2Clibor1Panru1Phchr2PosplRSB12_1TotalAnnotation Description
PFAMs
9,5419,4608,0469,6377,9178,2287,74660,575
40374141454742293ATPase family associated with various cellular activities (AAA)
50524639384946320ABC transporter
444444428ATP synthase alpha/beta family, nucleotide-binding domain
112EGF-like domain
15141415141714103Elongation factor Tu GTP binding domain
111110119111174Helix-loop-helix DNA-binding domain
10987119559Hsp20/alpha crystallin family
76121288962Hsp70 protein
778988956KH domain
11114SH2 domain
14162518252221141SH3 domain
1111101110101073Actin
66284282529126Ankyrin repeat
888677751ADP-ribosylation factor family
43463348425945316Eukaryotic aspartyl protease
233333421Cyclic nucleotide-binding domain
22Cytochrome b(C-terminal)/b6/petD
22Cytochrome b/b6/petB
11111117Cytochrome c
776565945Double-stranded RNA binding motif
1119319231581EF hand
111144Fe-4S binding domain
11114Fibronectin type III domain
112Globin
13121611172219110Glutathione S-transferase, C-terminal domain
11112118Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
11Hemopexin
11912999867Homeodomain
11Laminin EGF domain
222222214lactate/malate dehydrogenase, NAD binding domain
5441255439Myosin head (motor domain)
1331331851361191551971,058Cytochrome P450
2302292092272001531501,398Protein kinase domain
13121412162517109Pyridine nucleotide-disulphide oxidoreductase
31302528252826193Ras family
111110111111974Response regulator receiver domain
3487169148RNase H
63606966657162456RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
11111117Copper/zinc superoxide dismutase (SODC)
222423217Iron/manganese superoxide dismutases, alpha-hairpin domain
101051664253Subtilase family
34323334302730220Sugar (and other) transporter
1010101012101072Thioredoxin
557555537Tubulin/FtsZ family, GTPase domain
21049227von Willebrand factor type A domain
24244629585295328Zinc finger, C2H2 type
7106711696155280Zinc finger, C3HC4 type (RING finger)
1081611271495181Zinc knuckle
222222214Protein-tyrosine phosphatase
797994779883105615short chain dehydrogenase
42423944555958339Zinc-binding dehydrogenase
555556536Thiolase, N-terminal domain
334322724Beta-ketoacyl synthase, N-terminal domain
1131333152Fe-2S iron-sulfur cluster binding domain
221212111Enolase, C-terminal TIM barrel domain
123Cytochrome C and Quinol oxidase polypeptide I
888978957Glutamine amidotransferase class-I
101010131010972TCP-1/cpn60 chaperonin family
11ATP synthase A chain
444334426Glutamine synthetase, catalytic domain
11111117Triosephosphate isomerase
1414161610121395E1-E2 ATPase
16161816171615114Core histone H2A/H2B/H3/H4
33122415Copper binding proteins, plastocyanin/azurin family
779768650Alpha amylase, catalytic domain
666566540Phorbol esters/diacylglycerol binding domain (C1 domain)
445346430Bacterial transferase hexapeptide (six repeats)
443434224tRNA synthetases class I (I, L, M and V)
1515121810101191Cyclin, N-terminal domain
1314171114121697Carboxylesterase family
444444125DNA polymerase family B
334433424ATP synthase subunit C
1615201714172101Peroxidase
552743632Beta-lactamase
434455429C-5 cytosine-specific DNA methylase
11NADH dehydrogenase
21222423252624165Calcineurin-like phosphoesterase
18191018111412102Cellulase (glycosyl hydrolase family 5)
667576643tRNA synthetases class II (D, K and N)
38383938383837266Mitochondrial carrier protein
16151415141519108Aminotransferase class I and II
447376637Phosphoribosyl transferase domain
15141416141414101Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
21111118Phosphoglycerate kinase
221222213Ribosomal protein S4/S9 N-terminal domain
222222214Ribosomal protein S12/S23
11111117Chaperonin 10 Kd subunit
14131614141515101C2 domain
1010229212319114PH domain
111171067456bZIP transcription factor
20181714192119128Aldehyde dehydrogenase family
63656562768644461Fungal Zn(2)-Cys(6) binuclear cluster domain
21212225232425161Cytochrome b5-like Heme/Steroid binding domain
332234421Oxidoreductase molybdopterin binding domain
111110913161080Oxidoreductase NAD-binding domain
24232125232624166SNF2 family N-terminal domain
222222214Ribosomal protein S7p/S5e
23232125212222157Ubiquitin-conjugating enzyme
555555535Isocitrate/isopropylmalate dehydrogenase
222222214Ribosomal Proteins L2, RNA binding domain
222223215Hsp90 protein
222122213Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111117Dihydrofolate reductase
224232217Cysteine-rich secretory protein family
11111117Ribosomal protein S3, C-terminal domain
8108889758Cupin
33Chalcone and stilbene synthases, N-terminal domain
3333323202-oxoacid dehydrogenases acyltransferase (catalytic domain)
333355426Catalase
1111116Disintegrin
12146555148UDP-glucoronosyl and UDP-glucosyl transferase
767555540Aminotransferase class-III
222322215Ribosomal protein S19
11111117DNA gyrase B
334333322Thiamine pyrophosphate enzyme, central domain
333333321Lyase
11211219Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
11111117Adenylate and Guanylate cyclase catalytic domain
11111117ATP synthase delta (OSCP) subunit
11111117Orotidine 5'-phosphate decarboxylase / HUMPS family
11111128Indole-3-glycerol phosphate synthase
111321110Aromatic amino acid lyase
11111117Pyruvate kinase, barrel domain
89911910864Kinesin motor domain
32313434313232226DnaJ domain
14141515161413101Proteasome subunit
554449233Major intrinsic protein
11111117ATP synthase
225322218Glycosyl hydrolase family 1
111111173'5'-cyclic nucleotide phosphodiesterase
11111117Profilin
222222214Ribosomal protein L22p/L17e
222222214Ribosomal protein L14p/L23e
16171615161919118Ubiquitin family
555556536Cofilin/tropomyosin-type actin-binding protein
22222231514-3-3 protein
32218Alkaline phosphatase
11111117Zinc carboxypeptidase
66675150455659394Aldo/keto reductase family
7610513141368Myb-like DNA-binding domain
555555535Forkhead domain
11Glycosyl hydrolases family 32 N-terminal domain
221211110Ribosomal protein L16p/L10e
222222214Ribosomal protein S14p/S29e
335533325FKBP-type peptidyl-prolyl cis-trans isomerase
11111117Glutathione peroxidase
22217
11Dehydrin
8875814656Flavodoxin
11111218Calreticulin family
33311112Common central domain of tyrosinase
886769650Aminotransferase class-V
223484225Ribonucleotide reductase, small chain
57525462784948400DEAD/DEAH box helicase
847787821078882607Helicase conserved C-terminal domain
11121118EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
222222214Ribosomal protein L23
11111117Pyridoxal-dependent decarboxylase, C-terminal sheet domain
11111117Ribosomal protein L5
333535426Pyridoxal-dependent decarboxylase conserved domain
543433426Citrate synthase, C-terminal domain
555556536GHMP kinases N terminal domain
557656640Biotin carboxylase, N-terminal domain
11111117Tryptophan synthase alpha chain
8888810959Pyridoxal-phosphate dependent enzyme
16151614171714109NUDIX domain
444444327pfkB family carbohydrate kinase
779555846Glycosyl hydrolases family 28
222222214Ribosomal protein L3
222222214Ribosomal protein L11, RNA binding domain
98101089963Histidine phosphatase superfamily (branch 1)
11111117Thymidylate synthase
444444428ATP synthase alpha/beta chain, C terminal domain
554435430Calponin homology (CH) domain
225255425Glutamine amidotransferases class-II
222122213Ribosomal protein S15
733246227Thaumatin family
11111117Fructose-1-6-bisphosphatase, N-terminal domain
111161112Ribonucleotide reductase, all-alpha domain
212222213Ribosomal protein S2
522222116SRF-type transcription factor (DNA-binding and dimerisation domain)
988999961GATA zinc finger
109238212025116Amino acid permease
869866548Prolyl oligopeptidase family
222211111Ribosomal protein L30p/L7e
8813910101270Histidine phosphatase superfamily (branch 2)
11111117Respiratory-chain NADH dehydrogenase, 30 Kd subunit
444644430Aconitase family (aconitate hydratase)
665456335Glycosyl hydrolase family 10
11111117Glycosyl hydrolases family 17
222222214Ribosomal protein S5, N-terminal domain
222242216Nucleoside diphosphate kinase
441411217Tetraspanin family
222222214Ribosomal protein S10p/S20e
551868437Arrestin (or S-antigen), N-terminal domain
11111117Phosphoglucose isomerase
11111117Carbohydrate phosphorylase
211116SecY translocase
11111117Respiratory-chain NADH dehydrogenase, 49 Kd subunit
222222214Ribosomal protein L6
333334524Polyprenyl synthetase
122222213Hexokinase
111171377662Dynamin family
11111117Transcription factor TFIID (or TATA-binding protein, TBP)
334344425Rieske [2Fe-2S] domain
11114Phytochrome region
224Proton-conducting membrane transporter
778979855Biotin-requiring enzyme
11111218Phosphofructokinase
212222213Ribosomal protein S17
111141110Hydroxymethylglutaryl-coenzyme A reductase
333433322FGGY family of carbohydrate kinases, N-terminal domain
998899961Enoyl-CoA hydratase/isomerase
222222214Ribosomal protein S9/S16
224242218Transcription factor TFIIB repeat
675778848Cytidine and deoxycytidylate deaminase zinc-binding region
11111117Molybdopterin oxidoreductase
66861410555Chromo (CHRromatin Organisation MOdifier) domain
11111117Phosphatidylinositol-specific phospholipase C, Y domain
11221119Phosphatidylinositol-specific phospholipase C, X domain
776777849D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
222223316Malic enzyme, N-terminal domain
1122122116-phosphogluconate dehydrogenase, C-terminal domain
1212141195467Multicopper oxidase
871061011759WW domain
222223215Ribosomal RNA adenine dimethylase
117118124130124140117870WD domain, G-beta repeat
445355430Heavy-metal-associated domain
333333321Adenylate kinase
332222216Phosphoglucomutase/phosphomannomutase, C-terminal domain
221212111Ribosomal protein S8
222221112Ribosomal protein S11
896576445LIM domain
213Matrixin
554733330Regulator of chromosome condensation (RCC1) repeat
222222214Ribosomal protein S13/S18
11NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
222222214chorismate binding enzyme
33314321960s Acidic ribosomal protein
334545428Prenyltransferase and squalene oxidase repeat
556666741Protein kinase C terminal domain
11111117Single-strand binding protein family
11111117S-adenosylmethionine synthetase, N-terminal domain
101011101091171Bromodomain
8881179859Acyl-CoA dehydrogenase, C-terminal domain
14151515161514104Ubiquitin carboxyl-terminal hydrolase
111115Ribosomal protein L36
333332219Ribonuclease T2 family
555554231HSF-type DNA-binding
222222214SRP54-type protein, GTPase domain
11111117Urease alpha-subunit, N-terminal domain
17161417162215117Serine carboxypeptidase
888988857Phosphatidylinositol 3- and 4-kinase
222232215Transketolase, thiamine diphosphate binding domain
112Glycosyl hydrolases family 11
1113WHEP-TRS domain
322232216Inositol monophosphatase family
444445429Glutaredoxin
223234319Isocitrate lyase family
11111117Serine hydroxymethyltransferase
335364327Iron-containing alcohol dehydrogenase
222321214Ribosomal protein L10
555453532KOW motif
1111116Ribosomal protein L34
112Ribosomal protein L33
333533222RF-1 domain
332223419Sodium:solute symporter family
11111117Imidazoleglycerol-phosphate dehydratase
11111117DNA polymerase family A
11111117IMP dehydrogenase / GMP reductase domain
11111117Glucose-6-phosphate dehydrogenase, NAD binding domain
666679646Protein phosphatase 2C
334333221Nucleotidyl transferase
443434224Carbonic anhydrase
1211117Phosphoribulokinase / Uridine kinase family
91016201471288Fatty acid desaturase
776666846MutS domain V
11111117Delta-aminolevulinic acid dehydratase
444457533Arginase family
666666642MCM P-loop domain
221211110Squalene/phytoene synthase
81014911151077FHA domain
11NADH-ubiquinone/plastoquinone oxidoreductase chain 6
33323237264535240AMP-binding enzyme
1313141315131596G-protein alpha subunit
17161417151726122HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
11Cytochrome c oxidase subunit III
666777544His Kinase A (phospho-acceptor) domain
443333424Armadillo/beta-catenin-like repeat
13143115302834165Tetratricopeptide repeat
333333422Ion transport protein
11111117DNA gyrase/topoisomerase IV, subunit A
671141010957BRCA1 C Terminus (BRCT) domain
556466638Glycosyl transferases group 1
335246427Glycosyl transferase family 2
2215SAM domain (Sterile alpha motif)
113232315linker histone H1 and H5 family
11111117Ribosomal protein L7/L12 C-terminal domain
111115Pectate lyase
1111217ribonuclease
11111117Urease, gamma subunit
333233320CoA-ligase
4558410642Phosphopantetheine attachment site
222222214Formyl transferase
131391110111178Metallopeptidase family M24
11Vpu protein
2215319151571Leucine Rich Repeat
57438355832188alpha/beta hydrolase fold
333333321RNA polymerase Rpb2, domain 6
545556535PB1 domain
222222214Staphylococcal nuclease homologue
121210121011976Rab-GTPase-TBC domain
22111119Tudor domain
222222214WH1 domain
333335323Zinc finger, ZZ type
1111116HRDC domain
669799854CBS domain
222222214Ribosomal protein L13
222222214Ribosomal protein L4/L1 family
11111117Clp protease
443553327S1 RNA binding domain
11111117HIUase/Transthyretin family
555576437AhpC/TSA family
444444428tRNA synthetases class I (W and Y)
12121119UvrD/REP helicase N-terminal domain
101041056449Rhodanese-like domain
222222214Universal stress protein family
17213018334330192Acetyltransferase (GNAT) family
11111117SecE/Sec61-gamma subunits of protein translocation complex
11111117C-terminal regulatory domain of Threonine dehydratase
222222214AIR synthase related protein, N-terminal domain
556666640tRNA synthetase class II core domain (G, H, P, S and T)
224222216Tetrapyrrole (Corrin/Porphyrin) Methylases
11111117Glycosyl transferase family, a/b domain
221117Class II Aldolase and Adducin N-terminal domain
443333323Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
454344327Fes/CIP4, and EFC/F-BAR homology domain
225245323IQ calmodulin-binding motif
222222214Phosphoinositide 3-kinase family, accessory domain (PIK domain)
223334421Phospholipase D Active site motif
331511216Regulator of G protein signaling domain
444444529GTPase-activator protein for Ras-like GTPase
10108975655RasGEF domain
789896754RasGEF N-terminal motif
1213121213131287RhoGAP domain
1314131413141394RhoGEF domain
644445431SPRY domain
334343323RNA polymerase Rpb1, domain 2
11111117Guanylate kinase
334344324Gelsolin repeat
7885109754UBA/TS-N domain
12151713161716106PHD-finger
221222112GGL domain
545444430HECT-domain (ubiquitin-transferase)
11223211Helix-hairpin-helix motif
22111119MSP (Major sperm protein) domain
659598749Ribonuclease III domain
442422220Region in Clathrin and VPS
434443325RanBP1 domain
222132214PPIC-type PPIASE domain
11Phosphotyrosine interaction domain (PTB/PID)
213241215Zn-finger in Ran binding protein and others
15132316272714135Zinc finger C-x8-C-x5-C-x3-H type (and similar)
11111117B-box zinc finger
559559745Poly(ADP-ribose) polymerase catalytic domain
222222214Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
474713128132141114640F-box domain
11111117Elongation factor 1 gamma, conserved domain
1111116Calpain family cysteine protease
223223317Copper fist DNA binding domain
777877952CRAL/TRIO domain
60593167272736307BTB/POZ domain
741214Ricin-type beta-trefoil lectin domain
11111117Inhibitor of Apoptosis domain
333333321Voltage gated chloride channel
1091114791070Caspase domain
451781111561GDSL-like Lipase/Acylhydrolase
222211111Poly-adenylate binding protein, unique domain
11111117POLO box duplicated region
11NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
28282417162420157ABC transporter transmembrane region
666578543FAD binding domain
112234114Condensation domain
11112118S-adenosyl-L-homocysteine hydrolase, NAD binding domain
11121118HAMP domain
222222214ribosomal L5P family C-terminus
666767644Insulinase (Peptidase family M16)
434444427Dehydrogenase E1 component
11111117Lumazine binding domain
766667644Elongation factor G C-terminus
444444731HMGL-like
454445430DnaJ central domain
644232122Starch binding domain
332322116Ribosomal protein L1p/L10e family
555444532Cation transporting ATPase, C-terminus
668555742Cation transporter/ATPase, N-terminus
111111713dUTPase
444544429Aconitase C-terminal domain
333333321Amino acid kinase family
11111117N-(5'phosphoribosyl)anthranilate (PRA) isomerase
334322825Acyl transferase domain
11111117Urease beta subunit
334334222Dihydrodipicolinate synthetase family
11112811292834152haloacid dehalogenase-like hydrolase
112127Glycosyl hydrolases family 2
881091010964Glycosyl hydrolases family 18
1111116Proliferating cell nuclear antigen, N-terminal domain
1113Translation initiation factor IF-3, C-terminal domain
11111117Acylphosphatase
11111117Adenylosuccinate synthetase
11111117Asparaginase, N-terminal
333333220Peptidase S24-like
331111111Inorganic pyrophosphatase
131341045756Glycosyl hydrolases family 16
643322222Glycosyl hydrolases family 15
11111691462087NADH:flavin oxidoreductase / NADH oxidase family
111111173-hydroxyacyl-CoA dehydrogenase, C-terminal domain
454444328Glycosyl hydrolase family 20, catalytic domain
555555636HhH-GPD superfamily base excision DNA repair protein
11111117AIR carboxylase
19182430243527177GMC oxidoreductase
222222214Asparagine synthase
273020222733159Fungal cellulose binding domain
666955643Septin
1111116EF-1 guanine nucleotide exchange domain
11111117Homoserine dehydrogenase
664635232Flavin-binding monooxygenase-like
343433323tRNA synthetases class I (E and Q), catalytic domain
11121118tRNA synthetases class I (R)
555656537XPG N-terminal domain
7811611161170Metallo-beta-lactamase superfamily
111115F5/8 type C domain
444465431Choline/Carnitine o-acyltransferase
11111117Putative esterase
11Furin-like cysteine rich region
1111116Glycosyl hydrolase family 9
11111117Ferrochelatase
222222214Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
11111117Arginosuccinate synthase
1111217Electron transfer flavoprotein FAD-binding domain
433333322RNB domain
443325223Dioxygenase
564434329CNH domain
222222214Diacylglycerol kinase catalytic domain
1212121411111385Dual specificity phosphatase, catalytic domain
1111116MyTH4 domain
235434425P21-Rho-binding domain
15151315151613102PX domain
333533424Ras association (RalGDS/AF-6) domain
544434428UBX domain
555655536VHS domain
11111117Phosphoinositide 3-kinase C2
222222214DAHP synthetase I family
665444332Carbon-nitrogen hydrolase
112N-acetyltransferase
11111117Prephenate dehydratase
445455431Syntaxin
555555535Pumilio-family RNA binding repeat
876667646Histone-like transcription factor (CBF/NF-Y) and archaeal histone
11111117Pterin binding enzyme
11111117ER lumen protein retaining receptor
222222214Glycoprotease family
11111117Histidinol dehydrogenase
333333321impB/mucB/samB family
12115
11111117Ribosomal L15
331311113Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
11111117Ribosomal prokaryotic L21 protein
11111117Ribosomal L28 family
11111117Ribosomal L29 protein
11111117Ribosomal L39 protein
11111117Ribosomal S17
11111117Ribulose-phosphate 3 epimerase family
11111117Translationally controlled tumour protein
44454829Glycosyl hydrolase family 7
322432218RNA pseudouridylate synthase
666669645Histone deacetylase domain
222321113POT family
222221213PWWP domain
32291724201516153SET domain
777559242Isochorismatase family
222222113Permease family
11111117Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
799657649XPG I-region
11111117Acetokinase family
11111117DNA photolyase
111115Cation-independent mannose-6-phosphate receptor repeat
1111149Cytosol aminopeptidase family, catalytic domain
11114Sulfatase
111111176,7-dimethyl-8-ribityllumazine synthase
11111117Ribosomal protein S16
333233320Acyl CoA binding protein
545556737Cullin family