PFAM Domains • Panaeolus papilionaceus CIRM-BRFM 715 v1.0
Annotations/GenomesAgrped1Bolvit1Corgl3Crevar1Galma1Gymch1Gymjun1Hebcy2Hypsu1Panpap1Phoaln1Phocon1TotalAnnotation Description
PFAMs
8,7259,9628,17910,1289,4978,85610,0917,6758,51210,98011,3778,677112,659
227 transmembrane receptor (rhodopsin family)
394543384852454550394242528ATPase family associated with various cellular activities (AAA)
646651526861554450657961716ABC transporter
44444444448452ATP synthase alpha/beta family, nucleotide-binding domain
1214EGF-like domain
151616171515161817151817195Elongation factor Tu GTP binding domain
121011111111101211101310132Helix-loop-helix DNA-binding domain
12151078151377121211129Hsp20/alpha crystallin family
899111313141211121510137Hsp70 protein
961298887887898KH domain
11111117SH2 domain
291632222926152829162028290SH3 domain
121313121110111111131212141Actin
3114617438931375744324Ankyrin repeat
7128119888810108107ADP-ribosylation factor family
231923172827291524161923263Eukaryotic aspartyl protease
33333343333337Cyclic nucleotide-binding domain
112Cytochrome b(C-terminal)/b6/petD
22Cytochrome b/b6/petB
11112111111113Cytochrome c
76896648594577Double-stranded RNA binding motif
2131711719119181216135EF hand
111111174Fe-4S binding domain
111111118Fibronectin type III domain
121515201414951115618154Glutathione S-transferase, C-terminal domain
21112122121117Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
2417Hemopexin
97888989109119105Homeodomain
11114Laminin EGF domain
23222222223226lactate/malate dehydrogenase, NAD binding domain
11Lectin C-type domain
55565465756463Myosin head (motor domain)
170103171175174173141891541631781361,827Cytochrome P450
1671431651601921872302061521692441982,213Protein kinase domain
221515152021141719161216202Pyridine nucleotide-disulphide oxidoreductase
312725313528342930372828363Ras family
878988979710898Response regulator receiver domain
12319610995976297RNase H
696069606970566562587263773RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
113216Reverse transcriptase (RNA-dependent DNA polymerase)
11111112121215Copper/zinc superoxide dismutase (SODC)
22223232222226Iron/manganese superoxide dismutases, alpha-hairpin domain
81762416101512828158167Subtilase family
323326373938412233485035434Sugar (and other) transporter
9121110131010101010911125Thioredoxin
57565659658673Tubulin/FtsZ family, GTPase domain
467557438von Willebrand factor type A domain
33WAP-type (Whey Acidic Protein) 'four-disulfide core'
692871236054225875202861569Zinc finger, C2H2 type
674591374713566614673506Zinc finger, C3HC4 type (RING finger)
27143211391410201614812217Zinc knuckle
23343242246237Protein-tyrosine phosphatase
9342596580939248115791051301,001short chain dehydrogenase
573329333546402537413541452Zinc-binding dehydrogenase
4455445541010666Thiolase, N-terminal domain
83968954556573Beta-ketoacyl synthase, N-terminal domain
333133134113292Fe-2S iron-sulfur cluster binding domain
11Papain family cysteine protease
21111211232320Enolase, C-terminal TIM barrel domain
1113Cytochrome C and Quinol oxidase polypeptide I
11Cytochrome C oxidase subunit II, periplasmic domain
881088797798796Glutamine amidotransferase class-I
101010101011131113111410133TCP-1/cpn60 chaperonin family
112ATP synthase A chain
33433444433442Glutamine synthetase, catalytic domain
11112111111113Triosephosphate isomerase
121716181412161414202012185E1-E2 ATPase
181415121518171623172016201Core histone H2A/H2B/H3/H4
113111210Copper binding proteins, plastocyanin/azurin family
77578768598683Alpha amylase, catalytic domain
65556644545560Phorbol esters/diacylglycerol binding domain (C1 domain)
65533245353448Bacterial transferase hexapeptide (six repeats)
34345343355345tRNA synthetases class I (I, L, M and V)
111610121514121113121911156Cyclin, N-terminal domain
511615283428241640303434350Carboxylesterase family
43444444549453DNA polymerase family B
33433323333336ATP synthase subunit C
153164342317822181722199Peroxidase
114Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
1294101214157812813124Beta-lactamase
44444534444448C-5 cytosine-specific DNA methylase
112NADH dehydrogenase
272727253030223129272324322Calcineurin-like phosphoesterase
133110252220311014312914250Cellulase (glycosyl hydrolase family 5)
56557556855567tRNA synthetases class II (D, K and N)
393640364140383736434138465Mitochondrial carrier protein
112recA bacterial DNA recombination protein
151412161613161413161312170Aminotransferase class I and II
74738746743767Phosphoribosyl transferase domain
121712121212121214121712156Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11111111111112Phosphoglycerate kinase
21222222222223Ribosomal protein S4/S9 N-terminal domain
22222222222224Ribosomal protein S12/S23
11111112111113Chaperonin 10 Kd subunit
21824142716141722151414206C2 domain
2272072420516189719174PH domain
498854866810682bZIP transcription factor
181721181816141217161821206Aldehyde dehydrogenase family
695661596364426666435365707Fungal Zn(2)-Cys(6) binuclear cluster domain
232722222724212423252325286Cytochrome b5-like Heme/Steroid binding domain
21213224212325Oxidoreductase molybdopterin binding domain
66879988878993Oxidoreductase NAD-binding domain
252223312932262731243224326SNF2 family N-terminal domain
22223222222225Ribosomal protein S7p/S5e
222324232322242323273023287Ubiquitin-conjugating enzyme
65856665676672Isocitrate/isopropylmalate dehydrogenase
21222222222223Ribosomal Proteins L2, RNA binding domain
22223932332235Hsp90 protein
32223322223228Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111111111112Dihydrofolate reductase
1111113211Chitin recognition protein
32184225222336Cysteine-rich secretory protein family
11111111111112Ribosomal protein S3, C-terminal domain
22581221412232Cupin
1111111221113Annexin
333333334333372-oxoacid dehydrogenases acyltransferase (catalytic domain)
53425932334346Catalase
11111111111112Disintegrin
12126101166336470UDP-glucoronosyl and UDP-glucosyl transferase
655510555556567Aminotransferase class-III
22223222224227Ribosomal protein S19
1111111111111DNA gyrase B
34424553443344Thiamine pyrophosphate enzyme, central domain
43444543544448Lyase
22112222222222Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
11111212212217Adenylate and Guanylate cyclase catalytic domain
11111111111112ATP synthase delta (OSCP) subunit
11111111111112Orotidine 5'-phosphate decarboxylase / HUMPS family
11111111112113Indole-3-glycerol phosphate synthase
22325364222235Aromatic amino acid lyase
11111111111112Pyruvate kinase, barrel domain
9998889999119107Kinesin motor domain
363138333834303231293633401DnaJ domain
141714141414141414141614173Proteasome subunit
85797666446472Major intrinsic protein
21111111111113ATP synthase
33225333343337Glycosyl hydrolase family 1
111111211111133'5'-cyclic nucleotide phosphodiesterase
11111111111112Profilin
12121222122119Ribosomal protein L22p/L17e
22222222222224Ribosomal protein L14p/L23e
171618192020151618151614204Ubiquitin family
58556555555564Cofilin/tropomyosin-type actin-binding protein
1111116111111714-3-3 protein
3221322211322Alkaline phosphatase
11131111161119Zinc carboxypeptidase
633136484742412537344945498Aldo/keto reductase family
1571381313712157812130Myb-like DNA-binding domain
1184661064875681Forkhead domain
21115Glycosyl hydrolases family 32 N-terminal domain
12121121122117Ribosomal protein L16p/L10e
22222222222224Ribosomal protein S14p/S29e
363104943794365FKBP-type peptidyl-prolyl cis-trans isomerase
21112111111114Glutathione peroxidase
22212211
64736625853560Flavodoxin
11111111112113Calreticulin family
101988495311996101Common central domain of tyrosinase
1011711799779107104Aminotransferase class-V
222341622382248Ribonucleotide reductase, small chain
556070584959645256608354720DEAD/DEAH box helicase
87831069288101849110384105871,111Helicase conserved C-terminal domain
11111121111113Fructose-bisphosphate aldolase class-I
11111111111314EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
23222222223125Ribosomal protein L23
11111111111112Pyridoxal-dependent decarboxylase, C-terminal sheet domain
11111112111113Ribosomal protein L5
53864755576566Pyridoxal-dependent decarboxylase conserved domain
34344453346346Citrate synthase, C-terminal domain
55555556556562GHMP kinases N terminal domain
76657776777779Biotin carboxylase, N-terminal domain
11111111111112Tryptophan synthase alpha chain
77787777779787Pyridoxal-phosphate dependent enzyme
11'Paired box' domain
181616141818181817152217207NUDIX domain
45544456456456pfkB family carbohydrate kinase
753917652775477Glycosyl hydrolases family 28
22222322222225Ribosomal protein L3
22222212222223Ribosomal protein L11, RNA binding domain
87118111110989138113Histidine phosphatase superfamily (branch 1)
11111121111113Thymidylate synthase
113142113Lipoxygenase
44444444448452ATP synthase alpha/beta chain, C terminal domain
46654344434451Calponin homology (CH) domain
62627935522554Glutamine amidotransferases class-II
22222222222224Ribosomal protein S15
27162523443544Thaumatin family
11111111111112Fructose-1-6-bisphosphatase, N-terminal domain
112131231111128Ribonucleotide reductase, all-alpha domain
22222222222224Ribosomal protein S2
33536442333645SRF-type transcription factor (DNA-binding and dimerisation domain)
1010139121111911101111128GATA zinc finger
268218312510183091227225Amino acid permease
116679896891210101Prolyl oligopeptidase family
12121111133118Ribosomal protein L30p/L7e
910699109710778101Histidine phosphatase superfamily (branch 2)
11111111111112Respiratory-chain NADH dehydrogenase, 30 Kd subunit
64454654545456Aconitase family (aconitate hydratase)
8232695517225699Glycosyl hydrolase family 10
56364433264349Glycosyl hydrolases family 17
23222222222225Ribosomal protein S5, N-terminal domain
22122222221222Nucleoside diphosphate kinase
54134452247243Tetraspanin family
3115Galactoside-binding lectin
22222222223225Ribosomal protein S10p/S20e
54359316652453Arrestin (or S-antigen), N-terminal domain
61122131211122Phosphoglucose isomerase
11111111111112Carbohydrate phosphorylase
21111111115218SecY translocase
11111111111112Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222222222224Ribosomal protein L6
55749975444467Polyprenyl synthetase
22224324323332Hexokinase
713787787914910106Dynamin family
11211212111115Transcription factor TFIID (or TATA-binding protein, TBP)
43535434433445Rieske [2Fe-2S] domain
1214Phytochrome region
336Proton-conducting membrane transporter
10798101099109910110Biotin-requiring enzyme
11111111111112Phosphofructokinase
22222222222224Ribosomal protein S17
12111111111214Hydroxymethylglutaryl-coenzyme A reductase
42333333333336FGGY family of carbohydrate kinases, N-terminal domain
97881099899148108Enoyl-CoA hydratase/isomerase
22222222222224Ribosomal protein S9/S16
22223323424231Transcription factor TFIIB repeat
67666777866678Cytidine and deoxycytidylate deaminase zinc-binding region
11111121111113Molybdopterin oxidoreductase
1491571211971511913132Chromo (CHRromatin Organisation MOdifier) domain
33733443444345Phosphatidylinositol-specific phospholipase C, Y domain
33753453455350Phosphatidylinositol-specific phospholipase C, X domain
76656786677677D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
43333444333340Malic enzyme, N-terminal domain
111111111111126-phosphogluconate dehydrogenase, C-terminal domain
13587966313111211104Multicopper oxidase
81097910810119119111WW domain
22223222222225Ribosomal RNA adenine dimethylase
1851211811291662071421421411161431311,804WD domain, G-beta repeat
33434333435341Heavy-metal-associated domain
33333343334338Adenylate kinase
13231231122223Phosphoglucomutase/phosphomannomutase, C-terminal domain
14121151122122Ribosomal protein S8
22222222223225Ribosomal protein S11
76677767777579LIM domain
2136Matrixin
35332243236238Regulator of chromosome condensation (RCC1) repeat
22222322222225Ribosomal protein S13/S18
11NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
22222232222225chorismate binding enzyme
3342532323233560s Acidic ribosomal protein
45444446446453Prenyltransferase and squalene oxidase repeat
74647635745866Protein kinase C terminal domain
11111111111112Single-strand binding protein family
11111111211113S-adenosylmethionine synthetase, N-terminal domain
10101011101110101010810120Bromodomain
998109999109910110Acyl-CoA dehydrogenase, C-terminal domain
141514151918171415171515188Ubiquitin carboxyl-terminal hydrolase
1111111111111Ribosomal protein L36
23422323223230Ribonuclease T2 family
11Gonadotropin-releasing hormone
459416466446573HSF-type DNA-binding
22222222222224SRP54-type protein, GTPase domain
11111111112113Urease alpha-subunit, N-terminal domain
15119171413161017231414173Serine carboxypeptidase
11Scorpion short toxin, BmKK2
89889889888899Phosphatidylinositol 3- and 4-kinase
22222223222225Transketolase, thiamine diphosphate binding domain
32538222131362Glycosyl hydrolases family 11
1111111119WHEP-TRS domain
22222222222224Inositol monophosphatase family
43544455444551Glutaredoxin
645254241223554Isocitrate lyase family
11111111111112Serine hydroxymethyltransferase
22222222222224Iron-containing alcohol dehydrogenase
22222222222224Ribosomal protein L10
635485455510565KOW motif
11111111111112Ribosomal protein L34
111115Ribosomal protein L33
32332332234333RF-1 domain
11213221423527Sodium:solute symporter family
1111111111111Imidazoleglycerol-phosphate dehydratase
11111111111112DNA polymerase family A
11111111111112IMP dehydrogenase / GMP reductase domain
11211111111113Glucose-6-phosphate dehydrogenase, NAD binding domain
88139141010109101812131Protein phosphatase 2C
33132333333333Nucleotidyl transferase
683761187687784Carbonic anhydrase
12111111121114Phosphoribulokinase / Uridine kinase family
151010101414131111191412153Fatty acid desaturase
67666666666673MutS domain V
11111111111112Delta-aminolevulinic acid dehydratase
31334535432339Arginase family
669676766712684MCM P-loop domain
12121231122119Squalene/phytoene synthase
11Bacterial extracellular solute-binding proteins, family 3
1579111381181391115130FHA domain
11NADH-ubiquinone/plastoquinone oxidoreductase chain 6
452531263434332532334537400AMP-binding enzyme
181814192419241721162421235G-protein alpha subunit
351817132032231323171822251HMG (high mobility group) box
112NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
1113Cytochrome c oxidase subunit III
54755444535455His Kinase A (phospho-acceptor) domain
43444433232440Armadillo/beta-catenin-like repeat
391430153834163836201665361Tetratricopeptide repeat
44334333335442Ion transport protein
11111111111112DNA gyrase/topoisomerase IV, subunit A
1281031010711107611105BRCA1 C Terminus (BRCT) domain
65847756857674Glycosyl transferases group 1
53337436424650Glycosyl transferase family 2
31313124322126SAM domain (Sterile alpha motif)
44434234423441linker histone H1 and H5 family
11111111111112Ribosomal protein L7/L12 C-terminal domain
132224115Pectate lyase
12216ribonuclease
11111111111112Urease, gamma subunit
33333543334340CoA-ligase
106891076851013799Phosphopantetheine attachment site
22222222222224Formyl transferase
1010910991191014119121Metallopeptidase family M24
1511441617213142315116Leucine Rich Repeat
48104412444993147171646373alpha/beta hydrolase fold
53333333334339RNA polymerase Rpb2, domain 6
596555555