PFAM Domains • Lecythophora sp. AK0013 v1.0
Annotations/GenomesConPMI546Conli1Conlig1LecAK0013_1Neucr2Podan2ThoPMI491_1TotalAnnotation Description
PFAMs
8,5048,9999,24610,1858,0348,06715,98469,019
1237 transmembrane receptor (rhodopsin family)
11357 transmembrane receptor (Secretin family)
41454647435098370ATPase family associated with various cellular activities (AAA)
485457453738102381ABC transporter
444444428ATP synthase alpha/beta family, nucleotide-binding domain
14141315181415103Elongation factor Tu GTP binding domain
11141512201516103Helix-loop-helix DNA-binding domain
222335522Hsp20/alpha crystallin family
8779881158Hsp70 protein
1011118139870KH domain
11114SH2 domain
23212114262225152SH3 domain
9991011101068Actin
5011188195385241647Ankyrin repeat
2233131226PAN domain
788997755ADP-ribosylation factor family
22232425192264199Eukaryotic aspartyl protease
444464430Cyclic nucleotide-binding domain
11Cytochrome b(C-terminal)/b6/petD
11Cytochrome b/b6/petB
11111117Cytochrome c
221117Double-stranded RNA binding motif
1920182181821116EF hand
121321104Fe-4S binding domain
322332318Fibronectin type III domain
222222214Globin
141095673182Glutathione S-transferase, C-terminal domain
12111118Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
6775771049Homeodomain
433344425lactate/malate dehydrogenase, NAD binding domain
555455433Myosin head (motor domain)
6795957841102353831Cytochrome P450
112120125109134102166868Protein kinase domain
18192012131646144Pyridine nucleotide-disulphide oxidoreductase
30272929282633202Ras family
14171718171524122Response regulator receiver domain
333322218RNase H
60626254746158431RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
11Retroviral aspartyl protease
5128Reverse transcriptase (RNA-dependent DNA polymerase)
232432218Copper/zinc superoxide dismutase (SODC)
122132213Iron/manganese superoxide dismutases, alpha-hairpin domain
1923281782066181Subtilase family
639896763834241646Sugar (and other) transporter
1213141211131590Thioredoxin
1221111220Trypsin
444454530Tubulin/FtsZ family, GTPase domain
576164938von Willebrand factor type A domain
66717722645398451Zinc finger, C2H2 type
4136404424444251Zinc finger, C3HC4 type (RING finger)
61067129555Zinc knuckle
323223318Protein-tyrosine phosphatase
117140141846682353983short chain dehydrogenase
657380383348151488Zinc-binding dehydrogenase
555655536Thiolase, N-terminal domain
13202217112351157Beta-ketoacyl synthase, N-terminal domain
5553659382Fe-2S iron-sulfur cluster binding domain
1221129Papain family cysteine protease
111231110Enolase, C-terminal TIM barrel domain
123Cytochrome C and Quinol oxidase polypeptide I
213Cytochrome C oxidase subunit II, periplasmic domain
89991181064Glutamine amidotransferase class-I
1012101010101072TCP-1/cpn60 chaperonin family
11ATP synthase A chain
444455430Glutamine synthetase, catalytic domain
111122311Triosephosphate isomerase
14141519131622113E1-E2 ATPase
89991081063Core histone H2A/H2B/H3/H4
123Copper binding proteins, plastocyanin/azurin family
111314121081482Alpha amylase, catalytic domain
222122213Phorbol esters/diacylglycerol binding domain (C1 domain)
98789101162Bacterial transferase hexapeptide (six repeats)
344533426tRNA synthetases class I (I, L, M and V)
777775545Cyclin, N-terminal domain
18191914111497192Carboxylesterase family
444444428DNA polymerase family B
666646640ATP synthase subunit C
5667644175Peroxidase
91111126946104Beta-lactamase
332323319C-5 cytosine-specific DNA methylase
29293222322740211Calcineurin-like phosphoesterase
1515151851022100Cellulase (glycosyl hydrolase family 5)
789789755tRNA synthetases class II (D, K and N)
37363838403743269Mitochondrial carrier protein
1113recA bacterial DNA recombination protein
16151815141435127Aminotransferase class I and II
1099610101064Phosphoribosyl transferase domain
1010101011101273Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11111117Phosphoglycerate kinase
222222214Ribosomal protein S4/S9 N-terminal domain
222232215Ribosomal protein S12/S23
111115Bacterial regulatory helix-turn-helix proteins, AraC family
11111128Chaperonin 10 Kd subunit
1312131014131489C2 domain
1918168281717123PH domain
1010913981271bZIP transcription factor
18232120161465177Aldehyde dehydrogenase family
2151762881691391267241,837Fungal Zn(2)-Cys(6) binuclear cluster domain
24252422232341182Cytochrome b5-like Heme/Steroid binding domain
333343423Oxidoreductase molybdopterin binding domain
14151713151727118Oxidoreductase NAD-binding domain
22292626282435190SNF2 family N-terminal domain
212221212Ribosomal protein S7p/S5e
23222222202023152Ubiquitin-conjugating enzyme
757575945Isocitrate/isopropylmalate dehydrogenase
222222214Ribosomal Proteins L2, RNA binding domain
11111117Hsp90 protein
222222214Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111117Dihydrofolate reductase
5367242754Chitin recognition protein
3444331132Cysteine-rich secretory protein family
11111117Ribosomal protein S3, C-terminal domain
754713835Cupin
222232316Annexin
222211111Eukaryotic-type carbonic anhydrase
122112110Chalcone and stilbene synthases, N-terminal domain
3333334222-oxoacid dehydrogenases acyltransferase (catalytic domain)
666534535Catalase
222111110Disintegrin
322913929UDP-glucoronosyl and UDP-glucosyl transferase
6767972264Aminotransferase class-III
222222214Ribosomal protein S19
11112118DNA gyrase B
7765651248Thiamine pyrophosphate enzyme, central domain
355333527Lyase
222222214Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
11112118Adenylate and Guanylate cyclase catalytic domain
11111128ATP synthase delta (OSCP) subunit
12111118Orotidine 5'-phosphate decarboxylase / HUMPS family
11112118Indole-3-glycerol phosphate synthase
111126Aromatic amino acid lyase
112121210Pyruvate kinase, barrel domain
1017122213111297Kinesin motor domain
25282930332829202DnaJ domain
14141414161414100Proteasome subunit
656411528Major intrinsic protein
11111117ATP synthase
333321823Glycosyl hydrolase family 1
111121183'5'-cyclic nucleotide phosphodiesterase
11112118Profilin
11121118Ribosomal protein L22p/L17e
222222214Ribosomal protein L14p/L23e
141613151491495Ubiquitin family
555565536Cofilin/tropomyosin-type actin-binding protein
22233221614-3-3 protein
444276734Alkaline phosphatase
322224419Zinc carboxypeptidase
26353627192288253Aldo/keto reductase family
1515156201719107Myb-like DNA-binding domain
444444428Forkhead domain
54542525Glycosyl hydrolases family 32 N-terminal domain
11121118Ribosomal protein L16p/L10e
212222213Ribosomal protein S14p/S29e
446344530FKBP-type peptidyl-prolyl cis-trans isomerase
11111117Glutathione peroxidase
12222110
6985691154Flavodoxin
11Protamine P1
11Tropomyosin
143111112Calreticulin family
1411111591440114Common central domain of tyrosinase
8899881565Aminotransferase class-V
11121118Ribonucleotide reductase, small chain
39434242413743287DEAD/DEAH box helicase
77808172807788555Helicase conserved C-terminal domain
11111128EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
111222110Ribosomal protein L23
11111117Pyridoxal-dependent decarboxylase, C-terminal sheet domain
222222214Ribosomal protein L5
778666848Pyridoxal-dependent decarboxylase conserved domain
322343320Citrate synthase, C-terminal domain
545565535GHMP kinases N terminal domain
577665844Biotin carboxylase, N-terminal domain
11111117Tryptophan synthase alpha chain
1089911111674Pyridoxal-phosphate dependent enzyme
17161715182027130NUDIX domain
466595742pfkB family carbohydrate kinase
101010622159Glycosyl hydrolases family 28
111241818Luciferase-like monooxygenase
222222214Ribosomal protein L3
222222214Ribosomal protein L11, RNA binding domain
1212131312131590Histidine phosphatase superfamily (branch 1)
11111117Thymidylate synthase
111112310Lipoxygenase
444444428ATP synthase alpha/beta chain, C terminal domain
555585437Calponin homology (CH) domain
644255632Glutamine amidotransferases class-II
222222214Ribosomal protein S15
11111117Thaumatin family
222222214Fructose-1-6-bisphosphatase, N-terminal domain
11111117Ribonucleotide reductase, all-alpha domain
222222214Ribosomal protein S2
221122313SRF-type transcription factor (DNA-binding and dimerisation domain)
8889108960GATA zinc finger
30363813222386248Amino acid permease
4554331236Prolyl oligopeptidase family
222222214Ribosomal protein L30p/L7e
9999771262Histidine phosphatase superfamily (branch 2)
11111117Respiratory-chain NADH dehydrogenase, 30 Kd subunit
666444939Aconitase family (aconitate hydratase)
777648847Glycosyl hydrolase family 10
444353427Glycosyl hydrolases family 17
122222213Ribosomal protein S5, N-terminal domain
11111117Nucleoside diphosphate kinase
112Tetraspanin family
122212111Ribosomal protein S10p/S20e
544444429Arrestin (or S-antigen), N-terminal domain
11111117Phosphoglucose isomerase
11111117Carbohydrate phosphorylase
11111117SecY translocase
11111117Respiratory-chain NADH dehydrogenase, 49 Kd subunit
222222214Ribosomal protein L6
334333524Polyprenyl synthetase
444444428Hexokinase
1011913781674Dynamin family
11121219Transcription factor TFIID (or TATA-binding protein, TBP)
455444834Rieske [2Fe-2S] domain
1113Phytochrome region
11Proton-conducting membrane transporter
7998871159Biotin-requiring enzyme
11111117Phosphofructokinase
222221213Ribosomal protein S17
11111117Hydroxymethylglutaryl-coenzyme A reductase
444433325FGGY family of carbohydrate kinases, N-terminal domain
11Sodium:dicarboxylate symporter family
1212139791981Enoyl-CoA hydratase/isomerase
222222315Ribosomal protein S9/S16
222232215Transcription factor TFIIB repeat
8898991263Cytidine and deoxycytidylate deaminase zinc-binding region
11211118Molybdopterin oxidoreductase
6111111128766Chromo (CHRromatin Organisation MOdifier) domain
444444428Phosphatidylinositol-specific phospholipase C, Y domain
444664432Phosphatidylinositol-specific phospholipase C, X domain
6997662467D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
222232215Malic enzyme, N-terminal domain
11114PEP-utilising enzyme, mobile domain
111122196-phosphogluconate dehydrogenase, C-terminal domain
15161813101338123Multicopper oxidase
11Granulin
101212129101176WW domain
11121118Ribosomal RNA adenine dimethylase
11114Yeast PIR protein repeat
109104111105114114133790WD domain, G-beta repeat
468554436Heavy-metal-associated domain
433444325Adenylate kinase
222212213Phosphoglucomutase/phosphomannomutase, C-terminal domain
222232215Ribosomal protein S8
11121118Ribosomal protein S11
443454428LIM domain
426Matrixin
333523221Regulator of chromosome condensation (RCC1) repeat
222222214Ribosomal protein S13/S18
233232217chorismate binding enzyme
33334332260s Acidic ribosomal protein
11CUB domain
455444733Prenyltransferase and squalene oxidase repeat
555386840Protein kinase C terminal domain
11112118Single-strand binding protein family
11112118S-adenosylmethionine synthetase, N-terminal domain
7771089856Bromodomain
910999111875Acyl-CoA dehydrogenase, C-terminal domain
14141413171415101Ubiquitin carboxyl-terminal hydrolase
11114Ribosomal protein L36
222411517Ribonuclease T2 family
333333220HSF-type DNA-binding
222322215SRP54-type protein, GTPase domain
11112118Urease alpha-subunit, N-terminal domain
151615124637105Serine carboxypeptidase
888888957Phosphatidylinositol 3- and 4-kinase
134111415Transketolase, thiamine diphosphate binding domain
676526739Glycosyl hydrolases family 11
454455532Inositol monophosphatase family
444454530Glutaredoxin
4432321028Isocitrate lyase family
222232215Serine hydroxymethyltransferase
555411627Iron-containing alcohol dehydrogenase
222232215Ribosomal protein L10
444342223KOW motif
1111116Ribosomal protein L34
11Ribosomal protein L33
222333318RF-1 domain
253422826Sodium:solute symporter family
11111117Imidazoleglycerol-phosphate dehydratase
11111117DNA polymerase family A
11111117IMP dehydrogenase / GMP reductase domain
11111117Glucose-6-phosphate dehydrogenase, NAD binding domain
556575740Protein phosphatase 2C
222322215Nucleotidyl transferase
6554331339Carbonic anhydrase
11121118Phosphoribulokinase / Uridine kinase family
5766571147Fatty acid desaturase
666666642MutS domain V
11111117Delta-aminolevulinic acid dehydratase
444553934Arginase family
666666642MCM P-loop domain
222332115Squalene/phytoene synthase
11Bacterial extracellular solute-binding proteins, family 5 Middle
1097101091166FHA domain
37383732283995306AMP-binding enzyme
333346628G-protein alpha subunit
87610158862HMG (high mobility group) box
1114141513122099His Kinase A (phospho-acceptor) domain
222232215Armadillo/beta-catenin-like repeat
24282814263439193Tetratricopeptide repeat
444332424Ion transport protein
11112118DNA gyrase/topoisomerase IV, subunit A
11Binding-protein-dependent transport system inner membrane component
999510101163BRCA1 C Terminus (BRCT) domain
9997991062Glycosyl transferases group 1
654244530Glycosyl transferase family 2
1113129SAM domain (Sterile alpha motif)
11112118linker histone H1 and H5 family
11111117Ribosomal protein L7/L12 C-terminal domain
2214312Pectate lyase
111122210ribonuclease
11112118Urease, gamma subunit
444444428CoA-ligase
1712131982253144Phosphopantetheine attachment site
333333422Formyl transferase
89991071264Metallopeptidase family M24
141717219161499Leucine Rich Repeat
35424252436139323alpha/beta hydrolase fold
333333321RNA polymerase Rpb2, domain 6
444444428PB1 domain
222222214Staphylococcal nuclease homologue
1010101210101072Rab-GTPase-TBC domain
11111117Tudor domain
11111117WH1 domain
455443530Zinc finger, ZZ type
11121118HRDC domain
109871181164CBS domain
222232215Ribosomal protein L13
222232215Ribosomal protein L4/L1 family
11111117Clp protease
544554532S1 RNA binding domain
11113119HIUase/Transthyretin family
444233424AhpC/TSA family
444444428tRNA synthetases class I (W and Y)
111115UvrD/REP helicase N-terminal domain
555947843Rhodanese-like domain
222252217Universal stress protein family
434042233133105317Acetyltransferase (GNAT) family
11111117SecE/Sec61-gamma subunits of protein translocation complex
11112118C-terminal regulatory domain of Threonine dehydratase
222222315AIR synthase related protein, N-terminal domain
9997108961tRNA synthetase class II core domain (G, H, P, S and T)
11111117SpoU rRNA Methylase family
222222214Tetrapyrrole (Corrin/Porphyrin) Methylases
11111117Glycosyl transferase family, a/b domain
11114PDZ domain
8675222252Class II Aldolase and Adducin N-terminal domain
444454429Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
445544430Fes/CIP4, and EFC/F-BAR homology domain
565285435IQ calmodulin-binding motif
222222214Phosphoinositide 3-kinase family, accessory domain (PIK domain)
666366538Phospholipase D Active site motif
111421212Regulator of G protein signaling domain
444474431GTPase-activator protein for Ras-like GTPase
444464430RasGEF domain
444464430RasGEF N-terminal motif
999915101071RhoGAP domain
766775947RhoGEF domain
333434525SPRY domain
333233320RNA polymerase Rpb1, domain 2
222222315Guanylate kinase
544244629Gelsolin repeat
81077109657UBA/TS-N domain
15171716181418115PHD-finger
11111117GGL domain
6666106646HECT-domain (ubiquitin-transferase)
133121213Helix-hairpin-helix motif
11111117MSP (Major sperm protein) domain
444454631Ribonuclease III domain
322433320Region in Clathrin and VPS
333243321RanBP1 domain
222131213PPIC-type PPIASE domain
233243219Zn-finger in Ran binding protein and others
1617208151413103Zinc finger C-x8-C-x5-C-x3-H type (and similar)
232312316Poly(ADP-ribose) polymerase catalytic domain
11111117Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
56617210444780370F-box domain
11111117Elongation factor 1 gamma, conserved domain
444455531Calpain family cysteine protease
223122214Copper fist DNA binding domain
555565536CRAL/TRIO domain
119815861269BTB/POZ domain
333232925Ricin-type beta-trefoil lectin domain
11111117Inhibitor of Apoptosis domain
455443429Voltage gated chloride channel
3343231230Caspase domain
1712118101333104GDSL-like Lipase/Acylhydrolase
12211119Poly-adenylate binding protein, unique domain
112POLO box duplicated region
26333323201867220ABC transporter transmembrane region
347Integrase core domain
5875591251FAD binding domain
1056123112774Condensation domain
11112118S-adenosyl-L-homocysteine hydrolase, NAD binding domain
11111117HAMP domain
222222214ribosomal L5P family C-terminus
644665839Insulinase (Peptidase family M16)
333333422Dehydrogenase E1 component
11111117Lumazine binding domain
666585642Elongation factor G C-terminus
444564633HMGL-like
444464430DnaJ central domain
444434326Starch binding domain
222322215Ribosomal protein L1p/L10e family
87787101461Cation transporting ATPase, C-terminus
98798111668Cation transporter/ATPase, N-terminus
11121118dUTPase
666444939Aconitase C-terminal domain
333343423Amino acid kinase family
11112118N-(5'phosphoribosyl)anthranilate (PRA) isomerase
13202115102248149Acyl transferase domain
11112118Urease beta subunit
5344451641Dihydrodipicolinate synthetase family
31323214293449221haloacid dehalogenase-like hydrolase
7886671658Glycosyl hydrolases family 2
1214131791861144Glycosyl hydrolases family 18
11111117Proliferating cell nuclear antigen, N-terminal domain
1113Translation initiation factor IF-3, C-terminal domain
1111116Acylphosphatase
211211311Adenylosuccinate synthetase
222142417Asparaginase, N-terminal
11Beta defensin
123333217Peptidase S24-like
111122210Inorganic pyrophosphatase
1211131513102195Glycosyl hydrolases family 16
333323219Glycosyl hydrolases family 15
8788352160NADH:flavin oxidoreductase / NADH oxidase family
2333435233-hydroxyacyl-CoA dehydrogenase, C-terminal domain
211121715Glycosyl hydrolase family 20, catalytic domain
444564532HhH-GPD superfamily base excision DNA repair protein
11111117AIR carboxylase
2016171972762168GMC oxidoreductase
222223417Asparagine synthase
30222531213028187Fungal cellulose binding domain
555665537Septin
122111210EF-1 guanine nucleotide exchange domain
11111117Homoserine dehydrogenase
55562831Flavin-binding monooxygenase-like
112LPXTG cell wall anchor motif
344333323tRNA synthetases class I (E and Q), catalytic domain
111211310tRNA synthetases class I (R)
444544429XPG N-terminal domain
131418713836109Metallo-beta-lactamase superfamily
21222413F5/8 type C domain
233222216Choline/Carnitine o-acyltransferase
122212212Putative esterase
11111117Ferrochelatase
222242216Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
222121111Arginosuccinate synthase
11111117Electron transfer flavoprotein FAD-binding domain
11Ezrin/radixin/moesin family
333333321RNB domain
7777451653Dioxygenase
222343319CNH domain
222231214Diacylglycerol kinase catalytic domain
9999781061Dual specificity phosphatase, catalytic domain
333253322P21-Rho-binding domain
1210121316121287PX domain
333243321Ras association (RalGDS/AF-6) domain
545464533UBX domain
444544429VHS domain
11111117Phosphoinositide 3-kinase C2
222222214DAHP synthetase I family
6101081182578Carbon-nitrogen hydrolase
22112210N-acetyltransferase
11112118Prephenate dehydratase
444475432Syntaxin
11Pentapeptide repeats (8 copies)
555485537Pumilio-family RNA binding repeat
677796648Histone-like transcription factor (CBF/NF-Y) and archaeal histone
11111117Pterin binding enzyme
224222216ER lumen protein retaining receptor
222232215Glycoprotease family
222211212Histidinol dehydrogenase
444454429impB/mucB/samB family
1111116
11111117Ribosomal L15
11131119Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
11Ribosomal prokaryotic L21 protein
11111117Ribosomal L28 family
11111117Ribosomal L29 protein
1111116Ribosomal L39 protein
11111117Ribosomal S17
11111117Ribulose-phosphate 3 epimerase family
11111117Translationally controlled tumour protein
98