PFAM Domains • Irpex lacteus CCBAS Fr. 238 617/93 v1.0
Annotations/GenomesBjead1_1Cerun2Hydfim1Irplac1Panru1Phaca1Phchr2Phlgi1Trace1TotalAnnotation Description
PFAMs
8,5588,0469,48310,4297,9178,2098,2287,6957,49476,059
504138424549474239393ATPase family associated with various cellular activities (AAA)
464644503848494536402ABC transporter
44444444436ATP synthase alpha/beta family, nucleotide-binding domain
111115EGF-like domain
151414141413171414129Elongation factor Tu GTP binding domain
121013129911111299Helix-loop-helix DNA-binding domain
788911594465Hsp20/alpha crystallin family
81210108787777Hsp70 protein
88778787767KH domain
11111117SH2 domain
262516132524222225198SH3 domain
10101010101010111091Actin
2228552834252422193Ankyrin repeat
78787576762ADP-ribosylation factor family
553341564268593931424Eukaryotic aspartyl protease
33323433327Cyclic nucleotide-binding domain
11Cytochrome b(C-terminal)/b6/petD
112Cytochrome b/b6/petB
1111111119Cytochrome c
76646454648Double-stranded RNA binding motif
2219131920232118146EF hand
1111111184Fe-4S binding domain
11111117Fibronectin type III domain
21111129Globin
261618211733221711181Glutathione S-transferase, C-terminal domain
11112111110Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
11Hemopexin
111281095913986Homeodomain
112Laminin EGF domain
22232222219lactate/malate dehydrogenase, NAD binding domain
54555655444Myosin head (motor domain)
189185127157119251155126861,395Cytochrome P450
2012092072062001531531601551,644Protein kinase domain
221410121634252515173Pyridine nucleotide-disulphide oxidoreductase
242529292523282626235Ras family
111011151111111112103Response regulator receiver domain
128911163911483RNase H
706963696559716969604RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
213Reverse transcriptase (RNA-dependent DNA polymerase)
21111118Copper/zinc superoxide dismutase (SODC)
22232232220Iron/manganese superoxide dismutases, alpha-hairpin domain
3591163411456Subtilase family
303336393031273024280Sugar (and other) transporter
121012111211109996Thioredoxin
57555555547Tubulin/FtsZ family, GTPase domain
10104697349von Willebrand factor type A domain
634622245847525954425Zinc finger, C2H2 type
736711136956616459473Zinc finger, C3HC4 type (RING finger)
25167102723141112145Zinc knuckle
22332322221Protein-tyrosine phosphatase
6994741099870837872747short chain dehydrogenase
453944765555594234449Zinc-binding dehydrogenase
45455465442Thiolase, N-terminal domain
54322222224Beta-ketoacyl synthase, N-terminal domain
331133333232Fe-2S iron-sulfur cluster binding domain
11111121110Enolase, C-terminal TIM barrel domain
112Cytochrome C and Quinol oxidase polypeptide I
88887787768Glutamine amidotransferase class-I
91010121091091089TCP-1/cpn60 chaperonin family
64443544640Glutamine synthetase, catalytic domain
1111111119Triosephosphate isomerase
121619151010121013117E1-E2 ATPase
151814201718161616150Core histone H2A/H2B/H3/H4
21112243218Copper binding proteins, plastocyanin/azurin family
99786988973Alpha amylase, catalytic domain
46556465546Phorbol esters/diacylglycerol binding domain (C1 domain)
45344466541Bacterial transferase hexapeptide (six repeats)
33433443330tRNA synthetases class I (I, L, M and V)
141214121010101111104Cyclin, N-terminal domain
161722351417121612161Carboxylesterase family
44334444434DNA polymerase family B
34333333328ATP synthase subunit C
212011111412171010126Peroxidase
72454233434Beta-lactamase
54545555442C-5 cytosine-specific DNA methylase
262424262529262625231Calcineurin-like phosphoesterase
121019241116141214132Cellulase (glycosyl hydrolase family 5)
677671066661tRNA synthetases class II (D, K and N)
373939423833383736339Mitochondrial carrier protein
11recA bacterial DNA recombination protein
151415171416151515136Aminotransferase class I and II
77437767755Phosphoribosyl transferase domain
141414141416141413127Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111111119Phosphoglycerate kinase
21222222217Ribosomal protein S4/S9 N-terminal domain
22222222218Ribosomal protein S12/S23
1111111119Chaperonin 10 Kd subunit
151618141416151526149C2 domain
2022892118231917157PH domain
67886677560bZIP transcription factor
191717201925211718173Aldehyde dehydrogenase family
696562587656866174607Fungal Zn(2)-Cys(6) binuclear cluster domain
262222222322242424209Cytochrome b5-like Heme/Steroid binding domain
62463544438Oxidoreductase molybdopterin binding domain
121011121315161412115Oxidoreductase NAD-binding domain
272123302328262425227SNF2 family N-terminal domain
22222222218Ribosomal protein S7p/S5e
212122242121222221195Ubiquitin-conjugating enzyme
55565555546Isocitrate/isopropylmalate dehydrogenase
22222222218Ribosomal Proteins L2, RNA binding domain
22222233220Hsp90 protein
22222222218Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111111119Dihydrofolate reductase
64333322329Cysteine-rich secretory protein family
111111118Ribosomal protein S3, C-terminal domain
8871081596778Cupin
1223210Chalcone and stilbene synthases, N-terminal domain
333333233262-oxoacid dehydrogenases acyltransferase (catalytic domain)
33435452332Catalase
1111111119Disintegrin
96345652242UDP-glucoronosyl and UDP-glucosyl transferase
57565555548Aminotransferase class-III
22222222218Ribosomal protein S19
1111111119DNA gyrase B
34333333328Thiamine pyrophosphate enzyme, central domain
33343333328Lyase
22221221418Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1111111119Adenylate and Guanylate cyclase catalytic domain
111111118ATP synthase delta (OSCP) subunit
11111117Orotidine 5'-phosphate decarboxylase / HUMPS family
21111111110Indole-3-glycerol phosphate synthase
21112612117Aromatic amino acid lyase
1111111119Pyruvate kinase, barrel domain
10911159910101194Kinesin motor domain
313431343127322732279DnaJ domain
141515141613141414129Proteasome subunit
104654997559Major intrinsic protein
31111111111ATP synthase
25222222221Glycosyl hydrolase family 1
11111111193'5'-cyclic nucleotide phosphodiesterase
1111111119Profilin
22222121216Ribosomal protein L22p/L17e
22222222218Ribosomal protein L14p/L23e
171619191616191616154Ubiquitin family
55655565547Cofilin/tropomyosin-type actin-binding protein
2223222221914-3-3 protein
332222216Alkaline phosphatase
1111111119Zinc carboxypeptidase
645142554572565237474Aldo/keto reductase family
121073131314121599Myb-like DNA-binding domain
55585555649Forkhead domain
11Glycosyl hydrolases family 32 N-terminal domain
11221111111Ribosomal protein L16p/L10e
22222122217Ribosomal protein S14p/S29e
35433133429FKBP-type peptidyl-prolyl cis-trans isomerase
11121111110Glutathione peroxidase
222221213
97668101411677Flavodoxin
11111121110Calreticulin family
63111123431Common central domain of tyrosinase
76796598663Aminotransferase class-V
13228242226Ribonucleotide reductase, small chain
495468857844494446517DEAD/DEAH box helicase
86878910910782887877803Helicase conserved C-terminal domain
11111211110EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22222222218Ribosomal protein L23
1111111119Pyridoxal-dependent decarboxylase, C-terminal sheet domain
1111111119Ribosomal protein L5
53343455335Pyridoxal-dependent decarboxylase conserved domain
33443333329Citrate synthase, C-terminal domain
55555364543GHMP kinases N terminal domain
77685666657Biotin carboxylase, N-terminal domain
11121111110Tryptophan synthase alpha chain
8881189109879Pyridoxal-phosphate dependent enzyme
161615141716171616143NUDIX domain
44554544540pfkB family carbohydrate kinase
697854510660Glycosyl hydrolases family 28
22222222218Ribosomal protein L3
22222222218Ribosomal protein L11, RNA binding domain
10108108899880Histidine phosphatase superfamily (branch 1)
1111111119Thymidylate synthase
44444444436ATP synthase alpha/beta chain, C terminal domain
54553554541Calponin homology (CH) domain
55235655541Glutamine amidotransferases class-II
22222222218Ribosomal protein S15
53234467337Thaumatin family
1111111119Fructose-1-6-bisphosphatase, N-terminal domain
11116111114Ribonucleotide reductase, all-alpha domain
22222222218Ribosomal protein S2
22222222218SRF-type transcription factor (DNA-binding and dimerisation domain)
988999981079GATA zinc finger
2623882123202524178Amino acid permease
69666766658Prolyl oligopeptidase family
12221111112Ribosomal protein L30p/L7e
111313141012101114108Histidine phosphatase superfamily (branch 2)
1111111119Respiratory-chain NADH dehydrogenase, 30 Kd subunit
54544545440Aconitase family (aconitate hydratase)
45565564444Glycosyl hydrolase family 10
1111111119Glycosyl hydrolases family 17
22212222217Ribosomal protein S5, N-terminal domain
22224122219Nucleoside diphosphate kinase
11341211216Tetraspanin family
22232221218Ribosomal protein S10p/S20e
411186186752Arrestin (or S-antigen), N-terminal domain
1111111119Phosphoglucose isomerase
1111111119Carbohydrate phosphorylase
1111111119SecY translocase
1111111119Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222222218Ribosomal protein L6
33333343328Polyprenyl synthetase
22222222218Hexokinase
879117776769Dynamin family
1111111119Transcription factor TFIID (or TATA-binding protein, TBP)
44234444433Rieske [2Fe-2S] domain
11114Phytochrome region
224Proton-conducting membrane transporter
78777898768Biotin-requiring enzyme
11111121110Phosphofructokinase
22222222218Ribosomal protein S17
11114911120Hydroxymethylglutaryl-coenzyme A reductase
33343433430FGGY family of carbohydrate kinases, N-terminal domain
88889898773Enoyl-CoA hydratase/isomerase
22232122218Ribosomal protein S9/S16
24224222222Transcription factor TFIIB repeat
65877586759Cytidine and deoxycytidylate deaminase zinc-binding region
1111111119Molybdopterin oxidoreductase
19867148108888Chromo (CHRromatin Organisation MOdifier) domain
1111111119Phosphatidylinositol-specific phospholipase C, Y domain
12211111111Phosphatidylinositol-specific phospholipase C, X domain
66667677758D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
32332233324Malic enzyme, N-terminal domain
121212221146-phosphogluconate dehydrogenase, C-terminal domain
2143191055251Multicopper oxidase
10109111091191089WW domain
22222232219Ribosomal RNA adenine dimethylase
2121241341451242171401281571,381WD domain, G-beta repeat
45525253536Heavy-metal-associated domain
33333333327Adenylate kinase
22232222219Phosphoglucomutase/phosphomannomutase, C-terminal domain
21221122215Ribosomal protein S8
22232112217Ribosomal protein S11
66567666654LIM domain
213Matrixin
44653134434Regulator of chromosome condensation (RCC1) repeat
22222122217Ribosomal protein S13/S18
22222222218chorismate binding enzyme
3333443232860s Acidic ribosomal protein
54444454438Prenyltransferase and squalene oxidase repeat
76666667757Protein kinase C terminal domain
1111111119Single-strand binding protein family
1111111119S-adenosylmethionine synthetase, N-terminal domain
1111101010109101091Bromodomain
88897899874Acyl-CoA dehydrogenase, C-terminal domain
141515171612151514133Ubiquitin carboxyl-terminal hydrolase
1111116Ribosomal protein L36
23333222323Ribonuclease T2 family
45545343437HSF-type DNA-binding
22222222218SRP54-type protein, GTPase domain
11111211110Urease alpha-subunit, N-terminal domain
331423241624222218196Serine carboxypeptidase
888108888874Phosphatidylinositol 3- and 4-kinase
22223222219Transketolase, thiamine diphosphate binding domain
111328Glycosyl hydrolases family 11
11WHEP-TRS domain
42213322221Inositol monophosphatase family
34444254434Glutaredoxin
113233444438Isocitrate lyase family
1111111119Serine hydroxymethyltransferase
45346343335Iron-containing alcohol dehydrogenase
12232212217Ribosomal protein L10
55345434538KOW motif
1111116Ribosomal protein L34
112Ribosomal protein L33
33433333429RF-1 domain
32222333222Sodium:solute symporter family
111111118Imidazoleglycerol-phosphate dehydratase
1111111119DNA polymerase family A
1111111119IMP dehydrogenase / GMP reductase domain
11121111110Glucose-6-phosphate dehydrogenase, NAD binding domain
86877798868Protein phosphatase 2C
24333333327Nucleotidyl transferase
53253345333Carbonic anhydrase
1111111119Phosphoribulokinase / Uridine kinase family
15161110141571411113Fatty acid desaturase
66676666655MutS domain V
1111111119Delta-aminolevulinic acid dehydratase
54435475441Arginase family
86666666656MCM P-loop domain
11221111111Squalene/phytoene synthase
2014121111715811109FHA domain
423234402690454233384AMP-binding enzyme
161413161517131314131G-protein alpha subunit
151412121514171418131HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
867107878869His Kinase A (phospho-acceptor) domain
33323433327Armadillo/beta-catenin-like repeat
273119153026282532233Tetratricopeptide repeat
23323233223Ion transport protein
1111111119DNA gyrase/topoisomerase IV, subunit A
1011561091081180BRCA1 C Terminus (BRCT) domain
66546766652Glycosyl transferases group 1
45324464436Glycosyl transferase family 2
11114SAM domain (Sterile alpha motif)
33213223322linker histone H1 and H5 family
1111111119Ribosomal protein L7/L12 C-terminal domain
1113Pectate lyase
61121222118ribonuclease
11111211110Urease, gamma subunit
33333333327CoA-ligase
65109424107681Phosphopantetheine attachment site
22232222219Formyl transferase
109111310911101093Metallopeptidase family M24
1515411912151415110Leucine Rich Repeat
5043983553584534335alpha/beta hydrolase fold
33343333328RNA polymerase Rpb2, domain 6
65565665549PB1 domain
22322223220Staphylococcal nuclease homologue
1110121510101110998Rab-GTPase-TBC domain
31221111113Tudor domain
22222222117WH1 domain
53333954338Zinc finger, ZZ type
1111111119HRDC domain
997791299980CBS domain
22222222218Ribosomal protein L13
22222222218Ribosomal protein L4/L1 family
111111118Clp protease
33445435435S1 RNA binding domain
1111111119HIUase/Transthyretin family
65567766654AhpC/TSA family
44454444538tRNA synthetases class I (W and Y)
11561111118UvrD/REP helicase N-terminal domain
34995564550Rhodanese-like domain
22222222218Universal stress protein family
373019233334433632287Acetyltransferase (GNAT) family
1111111119SecE/Sec61-gamma subunits of protein translocation complex
11121111110C-terminal regulatory domain of Threonine dehydratase
22222222218AIR synthase related protein, N-terminal domain
66556566651tRNA synthetase class II core domain (G, H, P, S and T)
24222222220Tetrapyrrole (Corrin/Porphyrin) Methylases
1111111119Glycosyl transferase family, a/b domain
112Class II Aldolase and Adducin N-terminal domain
43443332329Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
54554345540Fes/CIP4, and EFC/F-BAR homology domain
35224454332IQ calmodulin-binding motif
22222222218Phosphoinositide 3-kinase family, accessory domain (PIK domain)
43113444428Phospholipase D Active site motif
11331111113Regulator of G protein signaling domain
44444344435GTPase-activator protein for Ras-like GTPase
58897556659RasGEF domain
69789667765RasGEF N-terminal motif
131211141312131312113RhoGAP domain
131313171312141313121RhoGEF domain
54444356439SPRY domain
34344333330RNA polymerase Rpb1, domain 2
1111111119Guanylate kinase
44454544438Gelsolin repeat
885510898970UBA/TS-N domain
151715161612171820146PHD-finger
21222122216GGL domain
45444444437HECT-domain (ubiquitin-transferase)
12112132114Helix-hairpin-helix motif
11111411112MSP (Major sperm protein) domain
109459889870Ribonuclease III domain
22442322223Region in Clathrin and VPS
34334233328RanBP1 domain
22123122217PPIC-type PPIASE domain
112Phosphotyrosine interaction domain (PTB/PID)
2314212318Zn-finger in Ran binding protein and others
282310142720272725201Zinc finger C-x8-C-x5-C-x3-H type (and similar)
1111111119B-box zinc finger
995951194566Poly(ADP-ribose) polymerase catalytic domain
22132222218Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
184131324713292141108114981F-box domain
1111111119Elongation factor 1 gamma, conserved domain
11111117Calpain family cysteine protease
23222232220Copper fist DNA binding domain
77887977767CRAL/TRIO domain
523144612724272319308BTB/POZ domain
6741624Ricin-type beta-trefoil lectin domain
1111111119Inhibitor of Apoptosis domain
33333333428Voltage gated chloride channel
2111151371091318117Caspase domain
1517431141110883GDSL-like Lipase/Acylhydrolase
12111111110Poly-adenylate binding protein, unique domain
11121111110POLO box duplicated region
202420221625242416191ABC transporter transmembrane region
76114Integrase core domain
56557787454FAD binding domain
323114225Condensation domain
11112111110S-adenosyl-L-homocysteine hydrolase, NAD binding domain
11121112111HAMP domain
22222222218ribosomal L5P family C-terminus
86666676657Insulinase (Peptidase family M16)
44444444436Dehydrogenase E1 component
1111111119Lumazine binding domain
66676676656Elongation factor G C-terminus
44444444436HMGL-like
44444554438DnaJ central domain
24113322119Starch binding domain
22332122219Ribosomal protein L1p/L10e family
55874444647Cation transporting ATPase, C-terminus
68985555758Cation transporter/ATPase, N-terminus
1111151112dUTPase
44544445438Aconitase C-terminal domain
33333333327Amino acid kinase family
21111111110N-(5'phosphoribosyl)anthranilate (PRA) isomerase
34322222222Acyl transferase domain
11111211110Urease beta subunit
34333443330Dihydrodipicolinate synthetase family
282815122927282733227haloacid dehalogenase-like hydrolase
11132112214Glycosyl hydrolases family 2
1510118101010111196Glycosyl hydrolases family 18
1111111119Proliferating cell nuclear antigen, N-terminal domain
1113Translation initiation factor IF-3, C-terminal domain
1