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PFAM Domains • Uncinocarpus reesii UAMH 1704
Annotations/GenomesBlade1Cocim1Gymau1Gymci1_1Hisca1Micca1Triru1Uncre1TotalAnnotation Description
PFAMs
7,6126,7717,1347,1555,9396,9946,6486,08954,342
4640413862423839346ATPase family associated with various cellular activities (AAA)
4141384130453933308ABC transporter
4444444432ATP synthase alpha/beta family, nucleotide-binding domain
1414141414141414112Elongation factor Tu GTP binding domain
8888588760Helix-loop-helix DNA-binding domain
2238211221Hsp20/alpha crystallin family
81277777762Hsp70 protein
118881089769KH domain
11111117SH2 domain
2323232318222222176SH3 domain
131010101010101083Actin
65479311744614453524Ankyrin repeat
21115PAN domain
8787777657ADP-ribosylation factor family
6466577546Eukaryotic aspartyl protease
5544344433Cyclic nucleotide-binding domain
11Cytochrome b(C-terminal)/b6/petD
111111118Cytochrome c
1111217Double-stranded RNA binding motif
2522171718171714147EF hand
22112221134Fe-4S binding domain
1232243219Fibronectin type III domain
112Globin
67101061312771Glutathione S-transferase, C-terminal domain
111111118Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
112Hemopexin
5688445545Homeodomain
2222222216lactate/malate dehydrogenase, NAD binding domain
11Low-density lipoprotein receptor repeat class B
5534555537Myosin head (motor domain)
4341746036795939431Cytochrome P450
1611461421321311631321481,155Protein kinase domain
11111010913121288Pyridine nucleotide-disulphide oxidoreductase
2726242422222223190Ras family
1291010677970Response regulator receiver domain
3165134225RNase H
7767576156606154493RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
4812Reverse transcriptase (RNA-dependent DNA polymerase)
111115Serpin (serine protease inhibitor)
2121121111Copper/zinc superoxide dismutase (SODC)
3122211113Iron/manganese superoxide dismutases, alpha-hairpin domain
51784617161992Subtilase family
2926363721212224216Sugar (and other) transporter
8889898664Thioredoxin
111111219Trypsin
5455444435Tubulin/FtsZ family, GTPase domain
6233143224von Willebrand factor type A domain
6758534949484542411Zinc finger, C2H2 type
5042394434403733319Zinc finger, C3HC4 type (RING finger)
118512876663Zinc knuckle
2222223217Protein-tyrosine phosphatase
6154636140604948436short chain dehydrogenase
3227373822272728238Zinc-binding dehydrogenase
5567544541Thiolase, N-terminal domain
31311942714889Beta-ketoacyl synthase, N-terminal domain
64555442352Fe-2S iron-sulfur cluster binding domain
212211211Enolase, C-terminal TIM barrel domain
81099798868Glutamine amidotransferase class-I
91010101110101080TCP-1/cpn60 chaperonin family
11ATP synthase A chain
4323344427Glutamine synthetase, catalytic domain
2222122215Triosephosphate isomerase
1516151413161614119E1-E2 ATPase
916119777773Core histone H2A/H2B/H3/H4
11Copper binding proteins, plastocyanin/azurin family
7455522434Alpha amylase, catalytic domain
3422222219Phorbol esters/diacylglycerol binding domain (C1 domain)
9967799864Bacterial transferase hexapeptide (six repeats)
3333433325tRNA synthetases class I (I, L, M and V)
8777467551Cyclin, N-terminal domain
45121231011360Carboxylesterase family
4444344431DNA polymerase family B
3333133221ATP synthase subunit C
2333323322Peroxidase
6576386748Beta-lactamase
3443333326C-5 cytosine-specific DNA methylase
3027252620273228215Calcineurin-like phosphoesterase
23531115Cellulase (glycosyl hydrolase family 5)
9777777758tRNA synthetases class II (D, K and N)
3835363632363435282Mitochondrial carrier protein
1519171713182015134Aminotransferase class I and II
871010788765Phosphoribosyl transferase domain
12101010101010981Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
111111118Phosphoglycerate kinase
211111119Ribosomal protein S4/S9 N-terminal domain
2222222216Ribosomal protein S12/S23
111111118Bacterial regulatory helix-turn-helix proteins, AraC family
111111118Chaperonin 10 Kd subunit
171611121111101098C2 domain
2216161516161713131PH domain
8768786858bZIP transcription factor
1814171512141314117Aldehyde dehydrogenase family
123100110119641099960784Fungal Zn(2)-Cys(6) binuclear cluster domain
2519212318242016166Cytochrome b5-like Heme/Steroid binding domain
4222333221Oxidoreductase molybdopterin binding domain
1410111291310988Oxidoreductase NAD-binding domain
2624242522252422192SNF2 family N-terminal domain
2222222216Ribosomal protein S7p/S5e
2222212119212219167Ubiquitin-conjugating enzyme
7766766651Isocitrate/isopropylmalate dehydrogenase
2222222216Ribosomal Proteins L2, RNA binding domain
111111118Hsp90 protein
2222222216Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111117Dihydrofolate reductase
41106243131Chitin recognition protein
224211113Cysteine-rich secretory protein family
111111118Ribosomal protein S3, C-terminal domain
1212219Cupin
3233222118Annexin
1112218Eukaryotic-type carbonic anhydrase
11114Chalcone and stilbene synthases, N-terminal domain
33543333272-oxoacid dehydrogenases acyltransferase (catalytic domain)
8233344330Catalase
111111118Disintegrin
11UDP-glucoronosyl and UDP-glucosyl transferase
12688755657Aminotransferase class-III
1222222114Ribosomal protein S19
111111118DNA gyrase B
7666555545Thiamine pyrophosphate enzyme, central domain
3333333223Lyase
2222222216Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
2226Sodium:neurotransmitter symporter family
21111118Adenylate and Guanylate cyclase catalytic domain
111111118ATP synthase delta (OSCP) subunit
2111122111Orotidine 5'-phosphate decarboxylase / HUMPS family
111111118Indole-3-glycerol phosphate synthase
11Aromatic amino acid lyase
111111118Pyruvate kinase, barrel domain
131010101011111186Kinesin motor domain
3327282824272626219DnaJ domain
1514141414141414113Proteasome subunit
2232233219Major intrinsic protein
111111118ATP synthase
11215Glycosyl hydrolase family 1
2111111193'5'-cyclic nucleotide phosphodiesterase
111112119Profilin
112111119Ribosomal protein L22p/L17e
2222222216Ribosomal protein L14p/L23e
1211121181111884Ubiquitin family
4344334328Cofilin/tropomyosin-type actin-binding protein
222222221614-3-3 protein
4566555541Alkaline phosphatase
1333144322Zinc carboxypeptidase
1714181712141216120Aldo/keto reductase family
2214151630192212150Myb-like DNA-binding domain
4444344431Forkhead domain
111111118Ribosomal protein L16p/L10e
2221222114Ribosomal protein S14p/S29e
2533434428FKBP-type peptidyl-prolyl cis-trans isomerase
112111119Glutathione peroxidase
1222122113
6576566748Flavodoxin
111111118Calreticulin family
8343711532Common central domain of tyrosinase
6587587652Aminotransferase class-V
111111118Ribonucleotide reductase, small chain
4239373843383737311DEAD/DEAH box helicase
8074727371727368583Helicase conserved C-terminal domain
111111118EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
2222222216Ribosomal protein L23
2222111213Pyridoxal-dependent decarboxylase, C-terminal sheet domain
121111119Ribosomal protein L5
6666667649Pyridoxal-dependent decarboxylase conserved domain
2222222216Citrate synthase, C-terminal domain
6566465442GHMP kinases N terminal domain
6676655647Biotin carboxylase, N-terminal domain
111111118Tryptophan synthase alpha chain
1112121281312989Pyridoxal-phosphate dependent enzyme
1010131681110886NUDIX domain
6565644440pfkB family carbohydrate kinase
1222222215Ribosomal protein L3
2222122114Ribosomal protein L11, RNA binding domain
13128981010777Histidine phosphatase superfamily (branch 1)
111111118Thymidylate synthase
4444444432ATP synthase alpha/beta chain, C terminal domain
5755555542Calponin homology (CH) domain
5435554435Glutamine amidotransferases class-II
2222222115Ribosomal protein S15
1113Thaumatin family
111111118Fructose-1-6-bisphosphatase, N-terminal domain
111111118Ribonucleotide reductase, all-alpha domain
2222122215Ribosomal protein S2
3422122218SRF-type transcription factor (DNA-binding and dimerisation domain)
10545755445GATA zinc finger
3330363920363533262Amino acid permease
4444554434Prolyl oligopeptidase family
3211211213Ribosomal protein L30p/L7e
6777566751Histidine phosphatase superfamily (branch 2)
111111118Respiratory-chain NADH dehydrogenase, 30 Kd subunit
4444444432Aconitase family (aconitate hydratase)
224Glycosyl hydrolase family 10
2333333323Glycosyl hydrolases family 17
2111222112Ribosomal protein S5, N-terminal domain
111111118Nucleoside diphosphate kinase
112Tetraspanin family
112Galactoside-binding lectin
1122112212Ribosomal protein S10p/S20e
4334333326Arrestin (or S-antigen), N-terminal domain
111111118Phosphoglucose isomerase
211111119Carbohydrate phosphorylase
111111118SecY translocase
111111118Respiratory-chain NADH dehydrogenase, 49 Kd subunit
2222222115Ribosomal protein L6
6566363540Polyprenyl synthetase
4554466741Hexokinase
98910595964Dynamin family
21111118Transcription factor TFIID (or TATA-binding protein, TBP)
7232522225Rieske [2Fe-2S] domain
6798766857Biotin-requiring enzyme
111111118Phosphofructokinase
3122221215Ribosomal protein S17
111112119Hydroxymethylglutaryl-coenzyme A reductase
4444444432FGGY family of carbohydrate kinases, N-terminal domain
11114Sodium:dicarboxylate symporter family
1314151413991198Enoyl-CoA hydratase/isomerase
3222222217Ribosomal protein S9/S16
2222222216Transcription factor TFIIB repeat
6687366446Cytidine and deoxycytidylate deaminase zinc-binding region
2111311212Molybdopterin oxidoreductase
710446134452Chromo (CHRromatin Organisation MOdifier) domain
2222222216Phosphatidylinositol-specific phospholipase C, Y domain
3333333324Phosphatidylinositol-specific phospholipase C, X domain
61087778760D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
211111119Malic enzyme, N-terminal domain
21221222146-phosphogluconate dehydrogenase, C-terminal domain
921276128Multicopper oxidase
11Granulin
119910689769WW domain
11111117Ribosomal RNA adenine dimethylase
126101111114101107104101865WD domain, G-beta repeat
5555255436Heavy-metal-associated domain
3443333326Adenylate kinase
3233322220Phosphoglucomutase/phosphomannomutase, C-terminal domain
2222221114Ribosomal protein S8
111111118Ribosomal protein S11
5444544434LIM domain
11Matrixin
1124111213Regulator of chromosome condensation (RCC1) repeat
2222222115Ribosomal protein S13/S18
2223222217chorismate binding enzyme
333332332360s Acidic ribosomal protein
4544554435Prenyltransferase and squalene oxidase repeat
91067577556Protein kinase C terminal domain
111111118Single-strand binding protein family
111111118S-adenosylmethionine synthetase, N-terminal domain
10777879762Bromodomain
111314131010101293Acyl-CoA dehydrogenase, C-terminal domain
2017161614161616131Ubiquitin carboxyl-terminal hydrolase
1111116Ribosomal protein L36
211111119Ribonuclease T2 family
3333332323HSF-type DNA-binding
2222222216SRP54-type protein, GTPase domain
121111119Urease alpha-subunit, N-terminal domain
17103351111767Serine carboxypeptidase
7777777655Phosphatidylinositol 3- and 4-kinase
111111118Transketolase, thiamine diphosphate binding domain
123Glycosyl hydrolases family 11
2233222218Inositol monophosphatase family
3454344431Glutaredoxin
2225322220Isocitrate lyase family
2222222216Serine hydroxymethyltransferase
3244132322Iron-containing alcohol dehydrogenase
2221223115Ribosomal protein L10
4554244533KOW motif
1111116Ribosomal protein L34
3312322218RF-1 domain
11111117Sodium:solute symporter family
112111119Imidazoleglycerol-phosphate dehydratase
111211119DNA polymerase family A
111112119IMP dehydrogenase / GMP reductase domain
211111119Glucose-6-phosphate dehydrogenase, NAD binding domain
7666555545Protein phosphatase 2C
2333222219Nucleotidyl transferase
2211311213Carbonic anhydrase
11111117Phosphoribulokinase / Uridine kinase family
6555365540Fatty acid desaturase
6666566647MutS domain V
111112119Delta-aminolevulinic acid dehydratase
3434222424Arginase family
6666666648MCM P-loop domain
1211112211Squalene/phytoene synthase
91077778560FHA domain
4939444441574543362AMP-binding enzyme
4333333325G-protein alpha subunit
12676666655HMG (high mobility group) box
5466344436His Kinase A (phospho-acceptor) domain
5322333324Armadillo/beta-catenin-like repeat
3226302422272422207Tetratricopeptide repeat
2222122114Ion transport protein
111111118DNA gyrase/topoisomerase IV, subunit A
12111110911111085BRCA1 C Terminus (BRCT) domain
5655666544Glycosyl transferases group 1
4434333327Glycosyl transferase family 2
1122111110SAM domain (Sterile alpha motif)
111111118linker histone H1 and H5 family
111111118Ribosomal protein L7/L12 C-terminal domain
33Pectate lyase
11125ribonuclease
121111119Urease, gamma subunit
5444344432CoA-ligase
131611149382516142Phosphopantetheine attachment site
2232122317Formyl transferase
14989998975Metallopeptidase family M24
12151114914131199Leucine Rich Repeat
2523272418272320187alpha/beta hydrolase fold
3333333425RNA polymerase Rpb2, domain 6
3454234328PB1 domain
2222222216Staphylococcal nuclease homologue
121111101112121089Rab-GTPase-TBC domain
111111118Tudor domain
211111119WH1 domain
5544345535Zinc finger, ZZ type
212222213HRDC domain
9898898867CBS domain
2222322116Ribosomal protein L13
2222222216Ribosomal protein L4/L1 family
111111118Clp protease
3444524430S1 RNA binding domain
211111119HIUase/Transthyretin family
1222222215AhpC/TSA family
4444444432tRNA synthetases class I (W and Y)
3446234329Rhodanese-like domain
3222222217Universal stress protein family
3534303025313128244Acetyltransferase (GNAT) family
111111118SecE/Sec61-gamma subunits of protein translocation complex
111111118C-terminal regulatory domain of Threonine dehydratase
2222222216AIR synthase related protein, N-terminal domain
14888798870tRNA synthetase class II core domain (G, H, P, S and T)
11111117SpoU rRNA Methylase family
2222222216Tetrapyrrole (Corrin/Porphyrin) Methylases
111111118Glycosyl transferase family, a/b domain
1111221110PDZ domain
5333623328Class II Aldolase and Adducin N-terminal domain
11Influenza non-structural protein (NS1)
6444343331Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
6455455539Fes/CIP4, and EFC/F-BAR homology domain
6544634638IQ calmodulin-binding motif
2222222216Phosphoinositide 3-kinase family, accessory domain (PIK domain)
7455533335Phospholipase D Active site motif
211111119Regulator of G protein signaling domain
3333333324GTPase-activator protein for Ras-like GTPase
5444444433RasGEF domain
5444444332RasGEF N-terminal motif
10777777759RhoGAP domain
6666566546RhoGEF domain
2222222216SPRY domain
3333333324RNA polymerase Rpb1, domain 2
2111113111Guanylate kinase
3444344430Gelsolin repeat
91077587760UBA/TS-N domain
3016181611161614137PHD-finger
11GGL domain
7666666649HECT-domain (ubiquitin-transferase)
1211112211Helix-hairpin-helix motif
11111117MSP (Major sperm protein) domain
7555666545Ribonuclease III domain
3123322218Region in Clathrin and VPS
4332333324RanBP1 domain
2222222216PPIC-type PPIASE domain
4322333121Zn-finger in Ran binding protein and others
1513182013141312118Zinc finger C-x8-C-x5-C-x3-H type (and similar)
2222222216Poly(ADP-ribose) polymerase catalytic domain
11111117Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
6153758137475437445F-box domain
111111118Elongation factor 1 gamma, conserved domain
111121119Calpain family cysteine protease
2212221214Copper fist DNA binding domain
6577566547CRAL/TRIO domain
571115344655BTB/POZ domain
21111118Inhibitor of Apoptosis domain
4333233324Voltage gated chloride channel
1111122110Caspase domain
3456353130GDSL-like Lipase/Acylhydrolase
111111118Poly-adenylate binding protein, unique domain
1416151512282314137ABC transporter transmembrane region
31114Integrase core domain
11Cathelicidin
5444455536FAD binding domain
77711622151186Condensation domain
111111118S-adenosyl-L-homocysteine hydrolase, NAD binding domain
211111119HAMP domain
2222222216ribosomal L5P family C-terminus
6556656645Insulinase (Peptidase family M16)
3333333324Dehydrogenase E1 component
111111118Lumazine binding domain
6666466646Elongation factor G C-terminus
6444544536HMGL-like
5444344331DnaJ central domain
1111116Starch binding domain
3232322219Ribosomal protein L1p/L10e family
97887910866Cation transporting ATPase, C-terminus
8109961111771Cation transporter/ATPase, N-terminus
1112121211dUTPase
4444444432Aconitase C-terminal domain
5333333326Amino acid kinase family
111111118N-(5'phosphoribosyl)anthranilate (PRA) isomerase
31398325131084Acyl transferase domain
121111119Urease beta subunit
3244233223Dihydrodipicolinate synthetase family
2730313026313024229haloacid dehalogenase-like hydrolase
2152111215Glycosyl hydrolases family 2
9831197201313120Glycosyl hydrolases family 18
121111119Proliferating cell nuclear antigen, N-terminal domain
11Translation initiation factor IF-3, C-terminal domain
1111116Acylphosphatase
111111219Adenylosuccinate synthetase
3111111110Asparaginase, N-terminal
134Beta defensin
3312222116Peptidase S24-like
112111119Inorganic pyrophosphatase
9466455443Glycosyl hydrolases family 16
12211119Glycosyl hydrolases family 15
2244311118NADH:flavin oxidoreductase / NADH oxidase family
12231111123-hydroxyacyl-CoA dehydrogenase, C-terminal domain
5333312323Glycosyl hydrolase family 20, catalytic domain
5545355436HhH-GPD superfamily base excision DNA repair protein
111111118AIR carboxylase
1151012854560GMC oxidoreductase
3222432220Asparagine synthase
22Fungal cellulose binding domain
7566555544Septin
111111118EF-1 guanine nucleotide exchange domain
111111118Homoserine dehydrogenase
2123132115Flavin-binding monooxygenase-like
11LPXTG cell wall anchor motif
5334344329tRNA synthetases class I (E and Q), catalytic domain
2111222112tRNA synthetases class I (R)
5444544434XPG N-terminal domain
561213687966Metallo-beta-lactamase superfamily
112F5/8 type C domain
3233222219Choline/Carnitine o-acyltransferase
111111118Putative esterase
111111118Ferrochelatase
2222222216Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
111111129Arginosuccinate synthase
111111118Electron transfer flavoprotein FAD-binding domain
4333333325RNB domain
4234211219Dioxygenase
2232432220CNH domain
3122222216Diacylglycerol kinase catalytic domain
8986688760Dual specificity phosphatase, catalytic domain
2222222216P21-Rho-binding domain
1312141513131410104PX domain
3333122320Ras association (RalGDS/AF-6) domain
5555455438UBX domain
4444444432VHS domain
111111118Phosphoinositide 3-kinase C2
4222222319DAHP synthetase I family
85910355550Carbon-nitrogen hydrolase
111111118N-acetyltransferase
111111118Prephenate dehydratase
2335333325Syntaxin
10555555545Pumilio-family RNA binding repeat
6666666547Histone-like transcription factor (CBF/NF-Y) and archaeal histone
111111118Pterin binding enzyme
121111