PFAM Domains • Monascus purpureus v1.0
Annotations/GenomesAspnid1Eurhe1Gymau1Monpu1Monru1Mycgr3Penex1Theau1TotalAnnotation Description
PFAMs
9,0748,2127,1347,2857,5466,4209,9627,07962,712
1127 transmembrane receptor (rhodopsin family)
4240414347424443342ATPase family associated with various cellular activities (AAA)
4948384249437234375ABC transporter
5444444433ATP synthase alpha/beta family, nucleotide-binding domain
11EGF-like domain
1314141414141414111Elongation factor Tu GTP binding domain
1398101010121082Helix-loop-helix DNA-binding domain
5233324426Hsp20/alpha crystallin family
8777777757Hsp70 protein
8888798864KH domain
11Ribulose bisphosphate carboxylase large chain, catalytic domain
111111118SH2 domain
2322232223232323182SH3 domain
10101010107101077Actin
5951933139419534443Ankyrin repeat
21141119PAN domain
7787777757ADP-ribosylation factor family
106698199875Eukaryotic aspartyl protease
4444444432Cyclic nucleotide-binding domain
112Cytochrome b(C-terminal)/b6/petD
11Cytochrome b/b6/petB
11111117Cytochrome c
2212221113Double-stranded RNA binding motif
1817171717201518139EF hand
1211111194Fe-4S binding domain
3232331118Fibronectin type III domain
21111118Globin
121310981620795Glutathione S-transferase, C-terminal domain
2111112211Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
22Hemopexin
7788737552Homeodomain
4325422224lactate/malate dehydrogenase, NAD binding domain
11Low-density lipoprotein receptor repeat class B
5534554435Myosin head (motor domain)
114777436427312350589Cytochrome P450
10495142114120113113102903Protein kinase domain
1916101314151914120Pyridine nucleotide-disulphide oxidoreductase
2323242324242423188Ras family
1917101010221910117Response regulator receiver domain
1016123326RNase H
6564576260576364492RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
20121Reverse transcriptase (RNA-dependent DNA polymerase)
11Serpin (serine protease inhibitor)
2221122113Copper/zinc superoxide dismutase (SODC)
2222222216Iron/manganese superoxide dismutases, alpha-hairpin domain
3585598447Subtilase family
106613643469311456555Sugar (and other) transporter
91089910101176Thioredoxin
211111119Trypsin
7454444436Tubulin/FtsZ family, GTPase domain
2231111213von Willebrand factor type A domain
6265535252628857491Zinc finger, C2H2 type
3942394142393638316Zinc finger, C3HC4 type (RING finger)
91252253442Zinc knuckle
2222223217Protein-tyrosine phosphatase
14111463698412415877830short chain dehydrogenase
73783739446810946494Zinc-binding dehydrogenase
7766677753Thiolase, N-terminal domain
371411131814397153Beta-ketoacyl synthase, N-terminal domain
55566445402Fe-2S iron-sulfur cluster binding domain
1222212214Enolase, C-terminal TIM barrel domain
22Cytochrome C and Quinol oxidase polypeptide I
11Cytochrome C oxidase subunit II, periplasmic domain
8898889967Glutamine amidotransferase class-I
1010109101091078TCP-1/cpn60 chaperonin family
3523323324Glutamine synthetase, catalytic domain
2222222216Triosephosphate isomerase
1813151516131818126E1-E2 ATPase
77117767759Core histone H2A/H2B/H3/H4
1255131313141287Alpha amylase, catalytic domain
2223322218Phorbol esters/diacylglycerol binding domain (C1 domain)
1010698912771Bacterial transferase hexapeptide (six repeats)
3333363327tRNA synthetases class I (I, L, M and V)
7778877758Cyclin, N-terminal domain
2417121214173611143Carboxylesterase family
444444428DNA polymerase family B
6534456437ATP synthase subunit C
3232244222Peroxidase
8178101013461Beta-lactamase
2342212319C-5 cytosine-specific DNA methylase
11NADH dehydrogenase
2827252627273425219Calcineurin-like phosphoesterase
124345411649Cellulase (glycosyl hydrolase family 5)
7877777757tRNA synthetases class II (D, K and N)
3839363636403836299Mitochondrial carrier protein
1113recA bacterial DNA recombination protein
2223171822132915159Aminotransferase class I and II
881010999972Phosphoribosyl transferase domain
11101010101291082Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
111111118Phosphoglycerate kinase
211111119Ribosomal protein S4/S9 N-terminal domain
2222222216Ribosomal protein S12/S23
11215Bacterial regulatory helix-turn-helix proteins, AraC family
111111118Chaperonin 10 Kd subunit
111011101013111288C2 domain
2017161819171619142PH domain
101169787866bZIP transcription factor
2828172627183818200Aldehyde dehydrogenase family
3052591101872021044071361,710Fungal Zn(2)-Cys(6) binuclear cluster domain
2826212122243122195Cytochrome b5-like Heme/Steroid binding domain
3422253324Oxidoreductase molybdopterin binding domain
1716111513122212118Oxidoreductase NAD-binding domain
2422242423262925197SNF2 family N-terminal domain
2222222216Ribosomal protein S7p/S5e
2120212121242021169Ubiquitin-conjugating enzyme
8866699860Isocitrate/isopropylmalate dehydrogenase
2222222216Ribosomal Proteins L2, RNA binding domain
111111118Hsp90 protein
2222222216Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
111111118Dihydrofolate reductase
7310145333Chitin recognition protein
2242242220Cysteine-rich secretory protein family
111111118Ribosomal protein S3, C-terminal domain
3164418Cupin
3132222116Annexin
111216Eukaryotic-type carbonic anhydrase
1113Chalcone and stilbene synthases, N-terminal domain
66Bacterial regulatory proteins, luxR family
34533343282-oxoacid dehydrogenases acyltransferase (catalytic domain)
41135538342Catalase
2211111110Disintegrin
141129UDP-glucoronosyl and UDP-glucosyl transferase
87877911663Aminotransferase class-III
1222222215Ribosomal protein S19
111111118DNA gyrase B
686910411660Thiamine pyrophosphate enzyme, central domain
4433355431Lyase
2222222216Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
12115Sodium:neurotransmitter symporter family
112Ferritin-like domain
111111118Adenylate and Guanylate cyclase catalytic domain
111111118ATP synthase delta (OSCP) subunit
1211211211Orotidine 5'-phosphate decarboxylase / HUMPS family
111111118Indole-3-glycerol phosphate synthase
11Neurohypophysial hormones, N-terminal Domain
21216Aromatic amino acid lyase
111111118Pyruvate kinase, barrel domain
111010101011111083Kinesin motor domain
2726282727282627216DnaJ domain
1514141414141414113Proteasome subunit
55344106239Major intrinsic protein
111111118ATP synthase
31126215Glycosyl hydrolase family 1
1111111183'5'-cyclic nucleotide phosphodiesterase
1111113110Profilin
112111119Ribosomal protein L22p/L17e
2222222216Ribosomal protein L14p/L23e
1191210121081082Ubiquitin family
4544427333Cofilin/tropomyosin-type actin-binding protein
222222221614-3-3 protein
4463333329Alkaline phosphatase
2131131113Zinc carboxypeptidase
4031182724224525232Aldo/keto reductase family
1715151314121514115Myb-like DNA-binding domain
4444464434Forkhead domain
3444116Glycosyl hydrolases family 32 N-terminal domain
111111118Ribosomal protein L16p/L10e
2222212215Ribosomal protein S14p/S29e
5333344328FKBP-type peptidyl-prolyl cis-trans isomerase
112111119Glutathione peroxidase
1222222215
7776688756Flavodoxin
11Protamine P1
111111118Calreticulin family
9341175333Common central domain of tyrosinase
65855411852Aminotransferase class-V
111111118Ribonucleotide reductase, small chain
3941373838464037316DEAD/DEAH box helicase
7071727470727569573Helicase conserved C-terminal domain
111111118EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
2222222216Ribosomal protein L23
1222223115Pyridoxal-dependent decarboxylase, C-terminal sheet domain
111112119Ribosomal protein L5
6666677650Pyridoxal-dependent decarboxylase conserved domain
3423333324Citrate synthase, C-terminal domain
5565556542GHMP kinases N terminal domain
8878868760Biotin carboxylase, N-terminal domain
1211212111Tryptophan synthase alpha chain
1414121213111411101Pyridoxal-phosphate dependent enzyme
1417131312151515114NUDIX domain
6565557544pfkB family carbohydrate kinase
1121229532Glycosyl hydrolases family 28
222219Luciferase-like monooxygenase
2222222216Ribosomal protein L3
2222212215Ribosomal protein L11, RNA binding domain
911881111161387Histidine phosphatase superfamily (branch 1)
111111118Thymidylate synthase
112Lipoxygenase
5444444433ATP synthase alpha/beta chain, C terminal domain
5555455539Calponin homology (CH) domain
5534445535Glutamine amidotransferases class-II
2222222216Ribosomal protein S15
11'Cold-shock' DNA-binding domain
112Thaumatin family
111111118Fructose-1-6-bisphosphatase, N-terminal domain
111111118Ribonucleotide reductase, all-alpha domain
2222222216Ribosomal protein S2
2222532220SRF-type transcription factor (DNA-binding and dimerisation domain)
7644587647GATA zinc finger
5236363938337233339Amino acid permease
6443325330Prolyl oligopeptidase family
2212212214Ribosomal protein L30p/L7e
97799710967Histidine phosphatase superfamily (branch 2)
111111118Respiratory-chain NADH dehydrogenase, 30 Kd subunit
6745553540Aconitase family (aconitate hydratase)
322123114Glycosyl hydrolase family 10
4332314323Glycosyl hydrolases family 17
2212221113Ribosomal protein S5, N-terminal domain
111111118Nucleoside diphosphate kinase
11Tetraspanin family
123Galactoside-binding lectin
2222222216Ribosomal protein S10p/S20e
6734526538Arrestin (or S-antigen), N-terminal domain
111111118Phosphoglucose isomerase
11111117Carbohydrate phosphorylase
111111118SecY translocase
111111118Respiratory-chain NADH dehydrogenase, 49 Kd subunit
2222222216Ribosomal protein L6
8663354338Polyprenyl synthetase
5756636543Hexokinase
7797769658Dynamin family
111112119Transcription factor TFIID (or TATA-binding protein, TBP)
9936759452Rieske [2Fe-2S] domain
11Bacterial regulatory proteins, lacI family
11114Phytochrome region
11Proton-conducting membrane transporter
910981089871Biotin-requiring enzyme
111111118Phosphofructokinase
1121121110Ribosomal protein S17
2111212111Hydroxymethylglutaryl-coenzyme A reductase
4445545435FGGY family of carbohydrate kinases, N-terminal domain
11Hemocyanin, copper containing domain
1113Sodium:dicarboxylate symporter family
11Prion/Doppel alpha-helical domain
1511158916141098Enoyl-CoA hydratase/isomerase
2222222216Ribosomal protein S9/S16
2222222216Transcription factor TFIIB repeat
7688888760Cytidine and deoxycytidylate deaminase zinc-binding region
2212211112Molybdopterin oxidoreductase
19545425347Chromo (CHRromatin Organisation MOdifier) domain
2221132215Phosphatidylinositol-specific phospholipase C, Y domain
2231152218Phosphatidylinositol-specific phospholipase C, X domain
11889969868D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
2213322217Malic enzyme, N-terminal domain
1113PEP-utilising enzyme, mobile domain
22222222166-phosphogluconate dehydrogenase, C-terminal domain
878789754Multicopper oxidase
11Granulin
10991010981176WW domain
111211119Ribosomal RNA adenine dimethylase
112108111108109104113109874WD domain, G-beta repeat
4457636540Heavy-metal-associated domain
3343323425Adenylate kinase
2232222217Phosphoglucomutase/phosphomannomutase, C-terminal domain
1122212213Ribosomal protein S8
111111118Ribosomal protein S11
4444443431LIM domain
11Matrixin
3122221114Regulator of chromosome condensation (RCC1) repeat
2222222216Ribosomal protein S13/S18
11NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
2222222216chorismate binding enzyme
333333332460s Acidic ribosomal protein
6644445437Prenyltransferase and squalene oxidase repeat
6767747650Protein kinase C terminal domain
11111117Single-strand binding protein family
1211112110S-adenosylmethionine synthetase, N-terminal domain
6577768753Bromodomain
1512141313151310105Acyl-CoA dehydrogenase, C-terminal domain
1415161514151416119Ubiquitin carboxyl-terminal hydrolase
1111116Ribosomal protein L36
2212222215Ribonuclease T2 family
11Gonadotropin-releasing hormone
3333333324HSF-type DNA-binding
2222222216SRP54-type protein, GTPase domain
121111119Urease alpha-subunit, N-terminal domain
573661311859Serine carboxypeptidase
6877786756Phosphatidylinositol 3- and 4-kinase
4312223219Transketolase, thiamine diphosphate binding domain
211116Glycosyl hydrolases family 11
3433444429Inositol monophosphatase family
4454424431Glutaredoxin
5525525534Isocitrate lyase family
2222222216Serine hydroxymethyltransferase
3343343326Iron-containing alcohol dehydrogenase
2222222115Ribosomal protein L10
3453364533KOW motif
11111117Ribosomal protein L34
2312222216RF-1 domain
4315523326Sodium:solute symporter family
112111119Imidazoleglycerol-phosphate dehydratase
11111117DNA polymerase family A
2111112110IMP dehydrogenase / GMP reductase domain
111111118Glucose-6-phosphate dehydrogenase, NAD binding domain
6766768652Protein phosphatase 2C
2232222318Nucleotidyl transferase
3113324219Carbonic anhydrase
11111218Phosphoribulokinase / Uridine kinase family
6555468443Fatty acid desaturase
4564466540MutS domain V
1112212111Delta-aminolevulinic acid dehydratase
4435545434Arginase family
6666666648MCM P-loop domain
1211121110Squalene/phytoene synthase
89710958965FHA domain
6746443944517036397AMP-binding enzyme
3333343325G-protein alpha subunit
7676676752HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
14126551816581His Kinase A (phospho-acceptor) domain
3323333323Armadillo/beta-catenin-like repeat
3225302322232523203Tetratricopeptide repeat
2222241217Ion transport protein
111111118DNA gyrase/topoisomerase IV, subunit A
101111111110111186BRCA1 C Terminus (BRCT) domain
89578412861Glycosyl transferases group 1
4235644331Glycosyl transferase family 2
1121141213SAM domain (Sterile alpha motif)
111111118linker histone H1 and H5 family
111111118Ribosomal protein L7/L12 C-terminal domain
63112417Pectate lyase
2211129ribonuclease
121111119Urease, gamma subunit
4745545438CoA-ligase
382111182215467178Phosphopantetheine attachment site
3433343225Formyl transferase
1298998111076Metallopeptidase family M24
1115111615161315112Leucine Rich Repeat
3032272733233830240alpha/beta hydrolase fold
3333333324RNA polymerase Rpb2, domain 6
3454434431PB1 domain
2222222216Staphylococcal nuclease homologue
111111111111121290Rab-GTPase-TBC domain
111111118Tudor domain
111111118WH1 domain
4544335533Zinc finger, ZZ type
122221212HRDC domain
108999910973CBS domain
2222222216Ribosomal protein L13
2222222216Ribosomal protein L4/L1 family
111111118Clp protease
4343333326S1 RNA binding domain
111111118HIUase/Transthyretin family
3323363225AhpC/TSA family
4444454433tRNA synthetases class I (W and Y)
11111128UvrD/REP helicase N-terminal domain
6443353533Rhodanese-like domain
2222222216Universal stress protein family
3523303435244424249Acetyltransferase (GNAT) family
111111118SecE/Sec61-gamma subunits of protein translocation complex
111111118C-terminal regulatory domain of Threonine dehydratase
2222222216AIR synthase related protein, N-terminal domain
7888878862tRNA synthetase class II core domain (G, H, P, S and T)
111112119SpoU rRNA Methylase family
2222322217Tetrapyrrole (Corrin/Porphyrin) Methylases
111111118Glycosyl transferase family, a/b domain
2111121211PDZ domain
5535558440Class II Aldolase and Adducin N-terminal domain
4444423429Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
4555545538Fes/CIP4, and EFC/F-BAR homology domain
5546744540IQ calmodulin-binding motif
2222222216Phosphoinositide 3-kinase family, accessory domain (PIK domain)
6555545540Phospholipase D Active site motif
1112211211Regulator of G protein signaling domain
3333333324GTPase-activator protein for Ras-like GTPase
5544445435RasGEF domain
5544425433RasGEF N-terminal motif
7777768756RhoGAP domain
5666646645RhoGEF domain
2322222217SPRY domain
2333333323RNA polymerase Rpb1, domain 2
1211311111Guanylate kinase
5544443433Gelsolin repeat
9677667654UBA/TS-N domain
1717181817131717134PHD-finger
1111116GGL domain
6666645645HECT-domain (ubiquitin-transferase)
2112221213Helix-hairpin-helix motif
111111118MSP (Major sperm protein) domain
4555646540Ribonuclease III domain
2323313320Region in Clathrin and VPS
3333112319RanBP1 domain
2222222216PPIC-type PPIASE domain
2223313117Zn-finger in Ran binding protein and others
1417181513131515120Zinc finger C-x8-C-x5-C-x3-H type (and similar)
2221113214Poly(ADP-ribose) polymerase catalytic domain
11111117Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
5345753848775942437F-box domain
111111118Elongation factor 1 gamma, conserved domain
2212222215Calpain family cysteine protease
2313213318Copper fist DNA binding domain
8775547548CRAL/TRIO domain
431154481049BTB/POZ domain
112Ricin-type beta-trefoil lectin domain
111111118Inhibitor of Apoptosis domain
3333343325Voltage gated chloride channel
3212213216Caspase domain
115533310545GDSL-like Lipase/Acylhydrolase
111111118Poly-adenylate binding protein, unique domain
2421152325194016183ABC transporter transmembrane region
162119Integrase core domain
11Cathelicidin
6645558645FAD binding domain
17871014830397Condensation domain
111111118S-adenosyl-L-homocysteine hydrolase, NAD binding domain
111111219HAMP domain
2222222216ribosomal L5P family C-terminus
6656656646Insulinase (Peptidase family M16)
3433334427Dehydrogenase E1 component
111111118Lumazine binding domain
5666656646Elongation factor G C-terminus
6645564541HMGL-like
4444443431DnaJ central domain
4143113Starch binding domain
2232223218Ribosomal protein L1p/L10e family
116867810864Cation transporting ATPase, C-terminus
13899108121382Cation transporter/ATPase, N-terminus
1111122110dUTPase
5745554540Aconitase C-terminal domain
3333335326Amino acid kinase family
111111118N-(5'phosphoribosyl)anthranilate (PRA) isomerase
36139101413365136Acyl transferase domain
121111119Urease beta subunit
8445538542Dihydrodipicolinate synthetase family
3730313234304336273haloacid dehalogenase-like hydrolase
75522710240Glycosyl hydrolases family 2
198316891514110Glycosyl hydrolases family 18
11111117Proliferating cell nuclear antigen, N-terminal domain
112Translation initiation factor IF-3, C-terminal domain
11111117Acylphosphatase
111111118Adenylosuccinate synthetase
2212225117Asparaginase, N-terminal
11Beta defensin
3312223319Peptidase S24-like
2121211212Inorganic pyrophosphatase
85645811552Glycosyl hydrolases family 16
2323313219Glycosyl hydrolases family 15
10124771015570NADH:flavin oxidoreductase / NADH oxidase family
55244483353-hydroxyacyl-CoA dehydrogenase, C-terminal domain
2131113214Glycosyl hydrolase family 20, catalytic domain
4444344431HhH-GPD superfamily base excision DNA repair protein
111111118AIR carboxylase
2525101311182614142GMC oxidoreductase
4322212319Asparagine synthase
62816Fungal cellulose binding domain
5565555541Septin
111111118EF-1 guanine nucleotide exchange domain
111111118Homoserine dehydrogenase
3222212317Flavin-binding monooxygenase-like
3333334325tRNA synthetases class I (E and Q), catalytic domain
111111118tRNA synthetases class I (R)
5445434332XPG N-terminal domain
171312111081713101Metallo-beta-lactamase superfamily
3115F5/8 type C domain
3232222218Choline/Carnitine o-acyltransferase
2111212111Putative esterase
111111118Ferrochelatase
2222222216Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
111111118Arginosuccinate synthase
111111118Electron transfer flavoprotein FAD-binding domain
3333323323RNB domain
10933438545Dioxygenase
2233222218CNH domain
22