PFAM Domains • Ceraceosorus guamensis MCA 4658 v1.0
Annotations/GenomesAcain1Cersp1Exova1Jamsp1Malgl1Psean1_1Psehu1Rhosp1Spore1Tilan2Tilwa1Ustma1Ustsp1TotalAnnotation Description
PFAMs
6,4415,6895,9785,3304,0575,9785,8525,7285,9005,2525,4555,6586,00473,322
11111111111117 transmembrane receptor (rhodopsin family)
32313432303129332930313029401ATPase family associated with various cellular activities (AAA)
32322925233737303431333833414ABC transporter
444444444344451ATP synthase alpha/beta family, nucleotide-binding domain
22EGF-like domain
14131414141314131413131314176Elongation factor Tu GTP binding domain
111188713138121191211134Helix-loop-helix DNA-binding domain
111111211111Hsp20/alpha crystallin family
777787777777994Hsp70 protein
8878778788888100KH domain
1111111111111SH2 domain
22242123152222232320222222281SH3 domain
101010109109910891010124Actin
14171615131716171616151515202Ankyrin repeat
13116PAN domain
768677878678893ADP-ribosylation factor family
101113151798128107910139Eukaryotic aspartyl protease
333323333333338Cyclic nucleotide-binding domain
112Cytochrome b(C-terminal)/b6/petD
112Cytochrome b/b6/petB
111111111111113Cytochrome c
22212223132123Double-stranded RNA binding motif
16151516131716131616151718203EF hand
1111222121121184Fe-4S binding domain
111111121111114Fibronectin type III domain
11Globin
10810727766584787Glutathione S-transferase, C-terminal domain
11111112111113Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
565615566456464Homeodomain
222222222222226lactate/malate dehydrogenase, NAD binding domain
454564454554560Myosin head (motor domain)
362226126181871514211922236Cytochrome P450
1039693948292939892919488991,215Protein kinase domain
1613141471617121411101313170Pyridine nucleotide-disulphide oxidoreductase
22222322142422212423222423286Ras family
131017104111216119101112146Response regulator receiver domain
23191125116133RNase H
55565855415860526156545658720RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
112Retroviral aspartyl protease
1326Reverse transcriptase (RNA-dependent DNA polymerase)
422222212232228Iron/manganese superoxide dismutases, alpha-hairpin domain
663434334754557Subtilase family
3920212684030342719212126332Sugar (and other) transporter
11989710101110981010122Thioredoxin
11Trypsin
444444454444453Tubulin/FtsZ family, GTPase domain
1131112121216von Willebrand factor type A domain
31293525153330333030282830377Zinc finger, C2H2 type
36313437213736353936323539448Zinc finger, C3HC4 type (RING finger)
11109105131081466118121Zinc knuckle
222222222212225Protein-tyrosine phosphatase
89506640124548444533404246600short chain dehydrogenase
41283620172730262518292325345Zinc-binding dehydrogenase
666536666556571Thiolase, N-terminal domain
9623164133251156Beta-ketoacyl synthase, N-terminal domain
4444453445444532Fe-2S iron-sulfur cluster binding domain
11112112111114Enolase, C-terminal TIM barrel domain
1113Cytochrome C and Quinol oxidase polypeptide I
112Cytochrome C oxidase subunit II, periplasmic domain
777767777776890Glutamine amidotransferase class-I
9999910999991010120TCP-1/cpn60 chaperonin family
11ATP synthase A chain
112112212112118Glutamine synthetase, catalytic domain
222222212222326Triosephosphate isomerase
131212129161391412131314162E1-E2 ATPase
881088671779779111Core histone H2A/H2B/H3/H4
11Bacterial regulatory helix-turn-helix protein, lysR family
11Copper binding proteins, plastocyanin/azurin family
54435444343447Alpha amylase, catalytic domain
343515515554551Phorbol esters/diacylglycerol binding domain (C1 domain)
565545565464464Bacterial transferase hexapeptide (six repeats)
333333333333339tRNA synthetases class I (I, L, M and V)
8610761061196788102Cyclin, N-terminal domain
181288199993899112Carboxylesterase family
444444444444452DNA polymerase family B
22322232221225ATP synthase subunit C
223223323223534Peroxidase
313224113222Beta-lactamase
222222222321C-5 cytosine-specific DNA methylase
11NADH dehydrogenase
20202121162421202218202121265Calcineurin-like phosphoesterase
7115644725475673Cellulase (glycosyl hydrolase family 5)
766565646566775tRNA synthetases class II (D, K and N)
37353934303637363637343635462Mitochondrial carrier protein
19131415101415171315141315187Aminotransferase class I and II
776667767767786Phosphoribosyl transferase domain
991010811101110109911127Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
111111111111113Phosphoglycerate kinase
222222222222226Ribosomal protein S4/S9 N-terminal domain
122222222222225Ribosomal protein S12/S23
112Bacterial regulatory helix-turn-helix proteins, AraC family
111111111111113Chaperonin 10 Kd subunit
111113127111111121010911139C2 domain
19182118131818181717201621234PH domain
665646787454775bZIP transcription factor
1881496161611149101616163Aldehyde dehydrogenase family
1146310050510193458752548386933Fungal Zn(2)-Cys(6) binuclear cluster domain
18171618101818191718181819224Cytochrome b5-like Heme/Steroid binding domain
32322212122123Oxidoreductase molybdopterin binding domain
877766767987792Oxidoreductase NAD-binding domain
21192020151819221917191721247SNF2 family N-terminal domain
223222222222227Ribosomal protein S7p/S5e
18181718111818191818181616223Ubiquitin-conjugating enzyme
756558778667784Isocitrate/isopropylmalate dehydrogenase
222221222221224Ribosomal Proteins L2, RNA binding domain
11111113111114Hsp90 protein
222222222221225Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
111111111111113Dihydrofolate reductase
112Chitin recognition protein
1131223212220Cysteine-rich secretory protein family
111111111111113Ribosomal protein S3, C-terminal domain
311117Cupin
1111111111111Annexin
3333233333333382-oxoacid dehydrogenases acyltransferase (catalytic domain)
533221222224Catalase
11111111111112Disintegrin
1211117UDP-glucoronosyl and UDP-glucosyl transferase
656545555555768Aminotransferase class-III
222221222222225Ribosomal protein S19
111111111111113DNA gyrase B
234152242222233Thiamine pyrophosphate enzyme, central domain
433333433333341Lyase
222212222222326Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
11Sodium:neurotransmitter symporter family
111111111111113Adenylate and Guanylate cyclase catalytic domain
111111111111113ATP synthase delta (OSCP) subunit
111111111111113Orotidine 5'-phosphate decarboxylase / HUMPS family
111111121111114Indole-3-glycerol phosphate synthase
1212111112215Aromatic amino acid lyase
111111111111113Pyruvate kinase, barrel domain
811899910810910109120Kinesin motor domain
26262626202827272726252628338DnaJ domain
14141413141514131414141414181Proteasome subunit
6611615685386677Major intrinsic protein
111111111111113ATP synthase
22111119Glycosyl hydrolase family 1
111143'5'-cyclic nucleotide phosphodiesterase
1111111111111Profilin
222223212122225Ribosomal protein L22p/L17e
222222222222226Ribosomal protein L14p/L23e
101398811914108111110132Ubiquitin family
334334344423545Cofilin/tropomyosin-type actin-binding protein
11111112111111414-3-3 protein
543214434344445Alkaline phosphatase
111111111110Zinc carboxypeptidase
2416231310171614159151315200Aldo/keto reductase family
1413101381010119981213140Myb-like DNA-binding domain
433335524435448Forkhead domain
22212212222323Glycosyl hydrolases family 32 N-terminal domain
111111111111113Ribosomal protein L16p/L10e
222211122221222Ribosomal protein S14p/S29e
333333333333339FKBP-type peptidyl-prolyl cis-trans isomerase
211111111111114Glutathione peroxidase
221221212122121
644332444554553Flavodoxin
11111111111112Calreticulin family
22311110Common central domain of tyrosinase
544338657547667Aminotransferase class-V
111111121111114Ribonucleotide reductase, small chain
41413837364040414039414038512DEAD/DEAH box helicase
69676167606867736961696769867Helicase conserved C-terminal domain
121111111111114EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
111111121111114Ribosomal protein L23
111111111111113Pyridoxal-dependent decarboxylase, C-terminal sheet domain
111111111111113Ribosomal protein L5
655533454555560Pyridoxal-dependent decarboxylase conserved domain
121111111221217Citrate synthase, C-terminal domain
555555555555565GHMP kinases N terminal domain
759448767665781Biotin carboxylase, N-terminal domain
111111111111113Tryptophan synthase alpha chain
9878511969771011107Pyridoxal-phosphate dependent enzyme
1112121071112111211121212145NUDIX domain
433343443344345pfkB family carbohydrate kinase
411312211319Glycosyl hydrolases family 28
11Luciferase-like monooxygenase
222222222222226Ribosomal protein L3
212222212221223Ribosomal protein L11, RNA binding domain
99910610911101071010120Histidine phosphatase superfamily (branch 1)
111111111111113Thymidylate synthase
11Lipoxygenase
444444454344452ATP synthase alpha/beta chain, C terminal domain
453424545445453Calponin homology (CH) domain
454546555555563Glutamine amidotransferases class-II
222222222222226Ribosomal protein S15
44'Cold-shock' DNA-binding domain
211138Thaumatin family
111111111111113Fructose-1-6-bisphosphatase, N-terminal domain
111111111111113Ribonucleotide reductase, all-alpha domain
222222222223227Ribosomal protein S2
221122232322226SRF-type transcription factor (DNA-binding and dimerisation domain)
99101087101010791010119GATA zinc finger
1812151281917171914111621199Amino acid permease
658523353553457Prolyl oligopeptidase family
112111112112116Ribosomal protein L30p/L7e
10888699786899105Histidine phosphatase superfamily (branch 2)
111111111111113Respiratory-chain NADH dehydrogenase, 30 Kd subunit
444454444444453Aconitase family (aconitate hydratase)
22222111Glycosyl hydrolase family 10
11112212112116Glycosyl hydrolases family 17
222222222222226Ribosomal protein S5, N-terminal domain
222223223313330Nucleoside diphosphate kinase
111115Tetraspanin family
112111111211216Ribosomal protein S10p/S20e
12212311114Arrestin (or S-antigen), N-terminal domain
11111111111213Phosphoglucose isomerase
11Carbohydrate phosphorylase
111111111111113SecY translocase
11111111111112Respiratory-chain NADH dehydrogenase, 49 Kd subunit
222222122222225Ribosomal protein L6
333333333333339Polyprenyl synthetase
222212222222225Hexokinase
335333333342341Dynamin family
112111111111114Transcription factor TFIID (or TATA-binding protein, TBP)
434324344244344Rieske [2Fe-2S] domain
123Proton-conducting membrane transporter
971064109898898105Biotin-requiring enzyme
111111111111113Phosphofructokinase
111122222112220Ribosomal protein S17
111111111111113Hydroxymethylglutaryl-coenzyme A reductase
32322322332330FGGY family of carbohydrate kinases, N-terminal domain
11101195111171211111112132Enoyl-CoA hydratase/isomerase
222223222222227Ribosomal protein S9/S16
223322222322229Transcription factor TFIIB repeat
767557757777986Cytidine and deoxycytidylate deaminase zinc-binding region
111111121111114Molybdopterin oxidoreductase
675737547373468Chromo (CHRromatin Organisation MOdifier) domain
222212212221223Phosphatidylinositol-specific phospholipase C, Y domain
222212212221223Phosphatidylinositol-specific phospholipase C, X domain
644236766236560D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
212111121111116Malic enzyme, N-terminal domain
1111111111111136-phosphogluconate dehydrogenase, C-terminal domain
942366546336865Multicopper oxidase
6109938668888897WW domain
222123222221225Ribosomal RNA adenine dimethylase
979710410091102104104103106961001041,308WD domain, G-beta repeat
323213223231330Heavy-metal-associated domain
11Dockerin type I domain
333332333333338Adenylate kinase
221321121221121Phosphoglucomutase/phosphomannomutase, C-terminal domain
211222222122223Ribosomal protein S8
212222222222225Ribosomal protein S11
465546646655668LIM domain
11Matrixin
122312222322327Regulator of chromosome condensation (RCC1) repeat
222222232222227Ribosomal protein S13/S18
222222222222226chorismate binding enzyme
33233333333333860s Acidic ribosomal protein
444434544444452Prenyltransferase and squalene oxidase repeat
665535656554667Protein kinase C terminal domain
111111111111113Single-strand binding protein family
111111111211114S-adenosylmethionine synthetase, N-terminal domain
1099910109910109109123Bromodomain
13910841111111111111110131Acyl-CoA dehydrogenase, C-terminal domain
13121314121313141312121313167Ubiquitin carboxyl-terminal hydrolase
1111111111111Ribosomal protein L36
21111222222119Ribonuclease T2 family
565525585654667HSF-type DNA-binding
222222222222226SRP54-type protein, GTPase domain
111111111111113Urease alpha-subunit, N-terminal domain
768656646776680Serine carboxypeptidase
8888788788868100Phosphatidylinositol 3- and 4-kinase
221112121111117Transketolase, thiamine diphosphate binding domain
111115Glycosyl hydrolases family 11
22211221114WHEP-TRS domain
333222232322332Inositol monophosphatase family
545434454444454Glutaredoxin
324233323223234Isocitrate lyase family
111111111111113Serine hydroxymethyltransferase
32322222122225Iron-containing alcohol dehydrogenase
212222323223228Ribosomal protein L10
54434445323344KOW motif
1111111111111Ribosomal protein L34
11Negative factor, (F-Protein) or Nef
111115Ribosomal protein L33
323123232222229RF-1 domain
44444424444446Sodium:solute symporter family
111111111111113Imidazoleglycerol-phosphate dehydratase
111111111111113DNA polymerase family A
121111111111114IMP dehydrogenase / GMP reductase domain
111111111111113Glucose-6-phosphate dehydrogenase, NAD binding domain
555555565555566Protein phosphatase 2C
111212222221221Nucleotidyl transferase
333111121121121Carbonic anhydrase
111111111111113Phosphoribulokinase / Uridine kinase family
454434444454453Fatty acid desaturase
666646666666676MutS domain V
11111111111112Delta-aminolevulinic acid dehydratase
312112221122323Arginase family
666676666566678MCM P-loop domain
222212222122224Squalene/phytoene synthase
745535686575773FHA domain
31272220122827142522252927309AMP-binding enzyme
344414444444448G-protein alpha subunit
778838878778995HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
11Cytochrome c oxidase subunit III
86136266136456788His Kinase A (phospho-acceptor) domain
433423222333337Armadillo/beta-catenin-like repeat
19212417202324192322202318273Tetratricopeptide repeat
11Envelope glycoprotein GP120
322322223313331Ion transport protein
111111111111113DNA gyrase/topoisomerase IV, subunit A
11Binding-protein-dependent transport system inner membrane component
7678755125944786BRCA1 C Terminus (BRCT) domain
546434494565564Glycosyl transferases group 1
536223353343446Glycosyl transferase family 2
1113SAM domain (Sterile alpha motif)
21312111111318linker histone H1 and H5 family
11111111111112Ribosomal protein L7/L12 C-terminal domain
111126Pectate lyase
12121221111217ribonuclease
111111111111113Urease, gamma subunit
457525535455560CoA-ligase
151265511938771112111Phosphopantetheine attachment site
343324424454446Formyl transferase
75667