PFAM Domains • Delphinella strobiligena CBS 735.71 v1.0
Annotations/GenomesAurpu_var_mel1Aurpu_var_nam1Aurpu_var_pul1Aurpu_var_sub1Delst1Horac1Linrh1TotalAnnotation Description
PFAMs
8,1358,0468,5678,2239,5379,4528,45860,418
3147 transmembrane receptor (Secretin family)
38384338424049288ATPase family associated with various cellular activities (AAA)
42464943363335284ABC transporter
444444428ATP synthase alpha/beta family, nucleotide-binding domain
14141414161515102Elongation factor Tu GTP binding domain
131313151291085Helix-loop-helix DNA-binding domain
223332217Hsp20/alpha crystallin family
77781191160Hsp70 protein
999977858KH domain
11114SH2 domain
19192019101312112SH3 domain
1010101010111071Actin
372746251449162Ankyrin repeat
811772136PAN domain
777777749ADP-ribosylation factor family
1113141212151087Eukaryotic aspartyl protease
444444428Cyclic nucleotide-binding domain
11111117Cytochrome c
322322115Double-stranded RNA binding motif
1718191744382EF hand
111144Fe-4S binding domain
222219Fibronectin type III domain
1111116Globin
1519181513207107Glutathione S-transferase, C-terminal domain
11221119Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
766645539Homeodomain
444422222lactate/malate dehydrogenase, NAD binding domain
11Low-density lipoprotein receptor repeat class B
11Lectin C-type domain
444444428Myosin head (motor domain)
52585869636158419Cytochrome P450
105109109110136104171844Protein kinase domain
1415141810121497Pyridine nucleotide-disulphide oxidoreductase
23232323272327169Ras family
38364640361510221Response regulator receiver domain
22122514RNase H
62646263545357415RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
11Reverse transcriptase (RNA-dependent DNA polymerase)
332232318Copper/zinc superoxide dismutase (SODC)
112122110Iron/manganese superoxide dismutases, alpha-hairpin domain
64641313753Subtilase family
79899493725849534Sugar (and other) transporter
9119911131173Thioredoxin
111115Trypsin
333333422Tubulin/FtsZ family, GTPase domain
435211117von Willebrand factor type A domain
53556455121517271Zinc finger, C2H2 type
45434441688195Zinc finger, C3HC4 type (RING finger)
645611427Zinc knuckle
224322217Protein-tyrosine phosphatase
1071011181149513374742short chain dehydrogenase
52536462485730366Zinc-binding dehydrogenase
555577640Thiolase, N-terminal domain
6781473348Beta-ketoacyl synthase, N-terminal domain
4453243252Fe-2S iron-sulfur cluster binding domain
212113111Enolase, C-terminal TIM barrel domain
888897856Glutamine amidotransferase class-I
1010101010101070TCP-1/cpn60 chaperonin family
11ATP synthase A chain
333334322Glutamine synthetase, catalytic domain
222221112Triosephosphate isomerase
1312121316161799E1-E2 ATPase
111010977862Core histone H2A/H2B/H3/H4
112Copper binding proteins, plastocyanin/azurin family
1115141385672Alpha amylase, catalytic domain
221122212Phorbol esters/diacylglycerol binding domain (C1 domain)
9991078456Bacterial transferase hexapeptide (six repeats)
333344525tRNA synthetases class I (I, L, M and V)
1177798857Cyclin, N-terminal domain
222330271798136Carboxylesterase family
44444424DNA polymerase family B
444443326ATP synthase subunit C
666642333Peroxidase
10886611655Beta-lactamase
333333321C-5 cytosine-specific DNA methylase
24272724202223167Calcineurin-like phosphoesterase
101218151451084Cellulase (glycosyl hydrolase family 5)
777777749tRNA synthetases class II (D, K and N)
41444241393936282Mitochondrial carrier protein
11114recA bacterial DNA recombination protein
18172218191714125Aminotransferase class I and II
1088854548Phosphoribosyl transferase domain
121212121211980Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11111117Phosphoglycerate kinase
222222113Ribosomal protein S4/S9 N-terminal domain
222222214Ribosomal protein S12/S23
1222119Bacterial regulatory helix-turn-helix proteins, AraC family
11111117Chaperonin 10 Kd subunit
11111111910871C2 domain
21192019101010109PH domain
66669121358bZIP transcription factor
17131814182518123Aldehyde dehydrogenase family
1981762132011321661001,186Fungal Zn(2)-Cys(6) binuclear cluster domain
27252425232918171Cytochrome b5-like Heme/Steroid binding domain
645435229Oxidoreductase molybdopterin binding domain
2018171714129107Oxidoreductase NAD-binding domain
25262727262624181SNF2 family N-terminal domain
223222215Ribosomal protein S7p/S5e
22222223222423158Ubiquitin-conjugating enzyme
778867649Isocitrate/isopropylmalate dehydrogenase
222222214Ribosomal Proteins L2, RNA binding domain
11111117Hsp90 protein
222222214Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111117Dihydrofolate reductase
3344115Chitin recognition protein
122224114Cysteine-rich secretory protein family
11111117Ribosomal protein S3, C-terminal domain
222124316Cupin
323222317Annexin
11114Eukaryotic-type carbonic anhydrase
112Chalcone and stilbene synthases, N-terminal domain
3333333212-oxoacid dehydrogenases acyltransferase (catalytic domain)
556464434Catalase
11111117Disintegrin
221163116UDP-glucoronosyl and UDP-glucosyl transferase
789798553Aminotransferase class-III
222222214Ribosomal protein S19
11111117DNA gyrase B
555679643Thiamine pyrophosphate enzyme, central domain
333345425Lyase
222221213Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
111115Sodium:neurotransmitter symporter family
11111117Adenylate and Guanylate cyclase catalytic domain
11111117ATP synthase delta (OSCP) subunit
11111117Orotidine 5'-phosphate decarboxylase / HUMPS family
11111117Indole-3-glycerol phosphate synthase
112116Aromatic amino acid lyase
11111117Pyruvate kinase, barrel domain
111191110111073Kinesin motor domain
26262526272724181DnaJ domain
1414141414141498Proteasome subunit
11121112136166Major intrinsic protein
11111117ATP synthase
466631228Glycosyl hydrolase family 1
111111173'5'-cyclic nucleotide phosphodiesterase
11111117Profilin
222222214Ribosomal protein L22p/L17e
222222214Ribosomal protein L14p/L23e
1110111099868Ubiquitin family
555444431Cofilin/tropomyosin-type actin-binding protein
22222331614-3-3 protein
455411323Alkaline phosphatase
11111128Zinc carboxypeptidase
28313729263023204Aldo/keto reductase family
14141315106577Myb-like DNA-binding domain
444545329Forkhead domain
355521122Glycosyl hydrolases family 32 N-terminal domain
111122210Ribosomal protein L16p/L10e
222222214Ribosomal protein S14p/S29e
444444428FKBP-type peptidyl-prolyl cis-trans isomerase
11111117Glutathione peroxidase
22228
897786651Flavodoxin
11111117Calreticulin family
444424628Common central domain of tyrosinase
119118109866Aminotransferase class-V
11111117Ribonucleotide reductase, small chain
41434141434140290DEAD/DEAH box helicase
74757574726669505Helicase conserved C-terminal domain
11Fructose-bisphosphate aldolase class-I
11111117EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
222222214Ribosomal protein L23
11111117Pyridoxal-dependent decarboxylase, C-terminal sheet domain
222221112Ribosomal protein L5
555565536Pyridoxal-dependent decarboxylase conserved domain
223333319Citrate synthase, C-terminal domain
555555535GHMP kinases N terminal domain
767867546Biotin carboxylase, N-terminal domain
11111117Tryptophan synthase alpha chain
12131312119979Pyridoxal-phosphate dependent enzyme
1415141313131395NUDIX domain
667545437pfkB family carbohydrate kinase
991310849Glycosyl hydrolases family 28
1116817Luciferase-like monooxygenase
222222214Ribosomal protein L3
222222113Ribosomal protein L11, RNA binding domain
16161616151611106Histidine phosphatase superfamily (branch 1)
11111117Thymidylate synthase
111115Lipoxygenase
444444428ATP synthase alpha/beta chain, C terminal domain
545556434Calponin homology (CH) domain
555521225Glutamine amidotransferases class-II
222222214Ribosomal protein S15
321111110Thaumatin family
11111117Fructose-1-6-bisphosphatase, N-terminal domain
11111117Ribonucleotide reductase, all-alpha domain
222222214Ribosomal protein S2
222232215SRF-type transcription factor (DNA-binding and dimerisation domain)
897977653GATA zinc finger
464849441976219Amino acid permease
322248425Prolyl oligopeptidase family
11111229Ribosomal protein L30p/L7e
121311131111778Histidine phosphatase superfamily (branch 2)
11111117Respiratory-chain NADH dehydrogenase, 30 Kd subunit
444444428Aconitase family (aconitate hydratase)
3343417Glycosyl hydrolase family 10
855521228Glycosyl hydrolases family 17
222222214Ribosomal protein S5, N-terminal domain
11111117Nucleoside diphosphate kinase
11Tetraspanin family
222222214Ribosomal protein S10p/S20e
445354328Arrestin (or S-antigen), N-terminal domain
11111117Phosphoglucose isomerase
11111117Carbohydrate phosphorylase
11111117SecY translocase
11111117Respiratory-chain NADH dehydrogenase, 49 Kd subunit
222222214Ribosomal protein L6
333343322Polyprenyl synthetase
444444428Hexokinase
446497842Dynamin family
11111218Transcription factor TFIID (or TATA-binding protein, TBP)
868734238Rieske [2Fe-2S] domain
1113Phytochrome region
11Proton-conducting membrane transporter
9891099761Biotin-requiring enzyme
11111117Phosphofructokinase
222222214Ribosomal protein S17
122221111Hydroxymethylglutaryl-coenzyme A reductase
544443327FGGY family of carbohydrate kinases, N-terminal domain
11Sodium:dicarboxylate symporter family
138911923881Enoyl-CoA hydratase/isomerase
222222214Ribosomal protein S9/S16
222222315Transcription factor TFIIB repeat
778786649Cytidine and deoxycytidylate deaminase zinc-binding region
11111218Molybdopterin oxidoreductase
444656332Chromo (CHRromatin Organisation MOdifier) domain
222223316Phosphatidylinositol-specific phospholipase C, Y domain
444446430Phosphatidylinositol-specific phospholipase C, X domain
9867810755D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
232232115Malic enzyme, N-terminal domain
2222322156-phosphogluconate dehydrogenase, C-terminal domain
1111117178671Multicopper oxidase
1099987860WW domain
11111117Ribosomal RNA adenine dimethylase
564651128Yeast PIR protein repeat
11010811110799103108746WD domain, G-beta repeat
445444631Heavy-metal-associated domain
333333422Adenylate kinase
222243318Phosphoglucomutase/phosphomannomutase, C-terminal domain
222222214Ribosomal protein S8
111122210Ribosomal protein S11
444444428LIM domain
113234317Regulator of chromosome condensation (RCC1) repeat
222222214Ribosomal protein S13/S18
222221213chorismate binding enzyme
33333332160s Acidic ribosomal protein
444443427Prenyltransferase and squalene oxidase repeat
666644335Protein kinase C terminal domain
11111117Single-strand binding protein family
11111117S-adenosylmethionine synthetase, N-terminal domain
91091188661Bromodomain
121091011191081Acyl-CoA dehydrogenase, C-terminal domain
15151515151613104Ubiquitin carboxyl-terminal hydrolase
1111116Ribosomal protein L36
33333217Ribonuclease T2 family
333333321HSF-type DNA-binding
222222214SRP54-type protein, GTPase domain
11111117Urease alpha-subunit, N-terminal domain
10101110812667Serine carboxypeptidase
888888856Phosphatidylinositol 3- and 4-kinase
233322116Transketolase, thiamine diphosphate binding domain
45331117Glycosyl hydrolases family 11
444532527Inositol monophosphatase family
444444428Glutaredoxin
343322219Isocitrate lyase family
222222214Serine hydroxymethyltransferase
443555430Iron-containing alcohol dehydrogenase
222222214Ribosomal protein L10
322333319KOW motif
111115Ribosomal protein L34
11Ribosomal protein L33
222233317RF-1 domain
344451324Sodium:solute symporter family
11111117Imidazoleglycerol-phosphate dehydratase
1111116DNA polymerase family A
11111117IMP dehydrogenase / GMP reductase domain
11111117Glucose-6-phosphate dehydrogenase, NAD binding domain
676666542Protein phosphatase 2C
333333422Nucleotidyl transferase
111116314Carbonic anhydrase
11112118Phosphoribulokinase / Uridine kinase family
778775445Fatty acid desaturase
666666642MutS domain V
11111117Delta-aminolevulinic acid dehydratase
555443430Arginase family
666666642MCM P-loop domain
322233318Squalene/phytoene synthase
7899881059FHA domain
42404647454826294AMP-binding enzyme
333333321G-protein alpha subunit
9107994755HMG (high mobility group) box
3533423632129199His Kinase A (phospho-acceptor) domain
333322117Armadillo/beta-catenin-like repeat
26232320151112130Tetratricopeptide repeat
334443324Ion transport protein
222121111DNA gyrase/topoisomerase IV, subunit A
1110910119666BRCA1 C Terminus (BRCT) domain
8810865651Glycosyl transferases group 1
447532227Glycosyl transferase family 2
222222315SAM domain (Sterile alpha motif)
11111117linker histone H1 and H5 family
11111117Ribosomal protein L7/L12 C-terminal domain
2455218Pectate lyase
121127ribonuclease
11111117Urease, gamma subunit
444446430CoA-ligase
981112189471Phosphopantetheine attachment site
335422221Formyl transferase
999999963Metallopeptidase family M24
1415161412264Leucine Rich Repeat
3737413610126179alpha/beta hydrolase fold
333333321RNA polymerase Rpb2, domain 6
333343322PB1 domain
222222214Staphylococcal nuclease homologue
1212121112121283Rab-GTPase-TBC domain
11111218Tudor domain
11111117WH1 domain
434333222Zinc finger, ZZ type
2212119HRDC domain
10109987659CBS domain
222222214Ribosomal protein L13
222222214Ribosomal protein L4/L1 family
11111117Clp protease
333344424S1 RNA binding domain
11111117HIUase/Transthyretin family
545555433AhpC/TSA family
455444531tRNA synthetases class I (W and Y)
11111117UvrD/REP helicase N-terminal domain
445478840Rhodanese-like domain
222222214Universal stress protein family
40334138192723221Acetyltransferase (GNAT) family
11111117SecE/Sec61-gamma subunits of protein translocation complex
11111117C-terminal regulatory domain of Threonine dehydratase
222222214AIR synthase related protein, N-terminal domain
777766747tRNA synthetase class II core domain (G, H, P, S and T)
222222214SpoU rRNA Methylase family
222222214Tetrapyrrole (Corrin/Porphyrin) Methylases
11111117Glycosyl transferase family, a/b domain
211116PDZ domain
565577540Class II Aldolase and Adducin N-terminal domain
333344424Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
444455531Fes/CIP4, and EFC/F-BAR homology domain
545423326IQ calmodulin-binding motif
222222214Phosphoinositide 3-kinase family, accessory domain (PIK domain)
566723332Phospholipase D Active site motif
111165520Regulator of G protein signaling domain
333333321GTPase-activator protein for Ras-like GTPase
444344427RasGEF domain
334333423RasGEF N-terminal motif
888888856RhoGAP domain
556566639RhoGEF domain
322232216SPRY domain
333333321RNA polymerase Rpb1, domain 2
21111118Guanylate kinase
334333322Gelsolin repeat
889997555UBA/TS-N domain
17181918141611113PHD-finger
11111117GGL domain
666666642HECT-domain (ubiquitin-transferase)
222211111Helix-hairpin-helix motif
11111117MSP (Major sperm protein) domain
454421323Ribonuclease III domain
121144518Region in Clathrin and VPS
233322217RanBP1 domain
22221211PPIC-type PPIASE domain
2121129Zn-finger in Ran binding protein and others
161515156111088Zinc finger C-x8-C-x5-C-x3-H type (and similar)
222221213Poly(ADP-ribose) polymerase catalytic domain
11111117Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
6149775313168277F-box domain
11111117Elongation factor 1 gamma, conserved domain
212222314Calpain family cysteine protease
122121211Copper fist DNA binding domain
565555536CRAL/TRIO domain
25233821262813174BTB/POZ domain
11Ricin-type beta-trefoil lectin domain
11111128Inhibitor of Apoptosis domain
444442426Voltage gated chloride channel
222234116Caspase domain
5119823442GDSL-like Lipase/Acylhydrolase
12211119Poly-adenylate binding protein, unique domain
11POLO box duplicated region
21242723161515141ABC transporter transmembrane region
11Integrase core domain
886776648FAD binding domain
236571125Condensation domain
11111117S-adenosyl-L-homocysteine hydrolase, NAD binding domain
11111117HAMP domain
222222214ribosomal L5P family C-terminus
555566638Insulinase (Peptidase family M16)
333333321Dehydrogenase E1 component
11111117Lumazine binding domain
666666642Elongation factor G C-terminus
555645434HMGL-like
444444428DnaJ central domain
11Sulfotransferase domain
3333416Starch binding domain
333333321Ribosomal protein L1p/L10e family
676777646Cation transporting ATPase, C-terminus
887887854Cation transporter/ATPase, N-terminus
222211111dUTPase
444444428Aconitase C-terminal domain
333333321Amino acid kinase family
11111117N-(5'phosphoribosyl)anthranilate (PRA) isomerase
6881483350Acyl transferase domain
11111117Urease beta subunit
7710752341Dihydrodipicolinate synthetase family
32313031121314163haloacid dehalogenase-like hydrolase
222314115Glycosyl hydrolases family 2
1077763343Glycosyl hydrolases family 18
11111117Proliferating cell nuclear antigen, N-terminal domain
1113Translation initiation factor IF-3, C-terminal domain
11111117Acylphosphatase
11111117Adenylosuccinate synthetase
222211111Asparaginase, N-terminal
433332321Peptidase S24-like
11111117Inorganic pyrophosphatase
1516171221712100Glycosyl hydrolases family 16
333331117Glycosyl hydrolases family 15
869867347NADH:flavin oxidoreductase / NADH oxidase family
7664432323-hydroxyacyl-CoA dehydrogenase, C-terminal domain
11111218Glycosyl hydrolase family 20, catalytic domain
545445532HhH-GPD superfamily base excision DNA repair protein
11111218AIR carboxylase
23222316181417133GMC oxidoreductase
333333220Asparagine synthase
45663327Fungal cellulose binding domain
454566636Septin
11111117EF-1 guanine nucleotide exchange domain
11111117Homoserine dehydrogenase
2321310223Flavin-binding monooxygenase-like
11LPXTG cell wall anchor motif
333333321tRNA synthetases class I (E and Q), catalytic domain
11111117tRNA synthetases class I (R)
445454430XPG N-terminal domain
1477111313974Metallo-beta-lactamase superfamily
123118F5/8 type C domain
222222214Choline/Carnitine o-acyltransferase
11111117Putative esterase
11114Glycosyl hydrolase family 9
22111119Ferrochelatase
222222214Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
12111118Arginosuccinate synthase
11111117Electron transfer flavoprotein FAD-binding domain
333333321RNB domain
768864645Dioxygenase
233333320CNH domain
222222214Diacylglycerol kinase catalytic domain
777778851Dual specificity phosphatase, catalytic domain
232322216P21-Rho-binding domain
1313131313131492PX domain
333322319Ras association (RalGDS/AF-6) domain
555555434UBX domain
444454429VHS domain
11111117Phosphoinositide 3-kinase C2
222222214DAHP synthetase I family
1181110119767Carbon-nitrogen hydrolase
223223115N-acetyltransferase
11111117Prephenate dehydratase
344443325Syntaxin
555544432Pumilio-family RNA binding repeat
11Apidaecin
666666743Histone-like transcription factor (CBF/NF-Y) and archaeal histone
11111117Pterin binding enzyme
222222214ER lumen protein retaining receptor
222222214Glycoprotease family
11212119Histidinol dehydrogenase
444444428impB/mucB/samB family
11114
11111117Ribosomal L15
111