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PFAM Domains • Hysterium pulicare
Annotations/GenomesDelco1Hyspu1_1Pyrtr1Rhyru1_1Stano2Tribi1TotalAnnotation Description
PFAMs
7,5929,0366,7139,3908,2916,67647,698
456239554842291ATPase family associated with various cellular activities (AAA)
334740484331242ABC transporter
44444424ATP synthase alpha/beta family, nucleotide-binding domain
112EGF-like domain
14141214151382Elongation factor Tu GTP binding domain
1010119121062Helix-loop-helix DNA-binding domain
43133317Hsp20/alpha crystallin family
87777844Hsp70 protein
89979951KH domain
11Ribulose bisphosphate carboxylase large chain, catalytic domain
1111116SH2 domain
212324192124132SH3 domain
1010711101058Actin
5010158906830397Ankyrin repeat
12244417PAN domain
76767740ADP-ribosylation factor family
612129121263Eukaryotic aspartyl protease
44444424Cyclic nucleotide-binding domain
1111116Cytochrome c
1121128Double-stranded RNA binding motif
171819161719106EF hand
12122194Fe-4S binding domain
22333215Fibronectin type III domain
111115Globin
131761811469Glutathione S-transferase, C-terminal domain
111115Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
11Hemopexin
6109910751Homeodomain
32324317lactate/malate dehydrogenase, NAD binding domain
11Low-density lipoprotein receptor repeat class B
55555429Myosin head (motor domain)
951598719611735689Cytochrome P450
10714710412711591691Protein kinase domain
16221219151195Pyridine nucleotide-disulphide oxidoreductase
232722222324141Ras family
151824192214112Response regulator receiver domain
1516114RNase H
626158655561362RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
11Reverse transcriptase (RNA-dependent DNA polymerase)
22223314Copper/zinc superoxide dismutase (SODC)
22221110Iron/manganese superoxide dismutases, alpha-hairpin domain
7119910854Subtilase family
4578881118119422Sugar (and other) transporter
1112910131065Thioredoxin
21214111Trypsin
44464426Tubulin/FtsZ family, GTPase domain
24353421von Willebrand factor type A domain
575470394757324Zinc finger, C2H2 type
467343554747311Zinc finger, C3HC4 type (RING finger)
7823125358Zinc knuckle
22222212Protein-tyrosine phosphatase
9617211317612172750short chain dehydrogenase
417560806132349Zinc-binding dehydrogenase
66766536Thiolase, N-terminal domain
18292341223136Beta-ketoacyl synthase, N-terminal domain
666664342Fe-2S iron-sulfur cluster binding domain
1211117Enolase, C-terminal TIM barrel domain
98698848Glutamine amidotransferase class-I
1010101091059TCP-1/cpn60 chaperonin family
34333218Glutamine synthetase, catalytic domain
22222111Triosephosphate isomerase
13131618161187E1-E2 ATPase
873166765Core histone H2A/H2B/H3/H4
1113Copper binding proteins, plastocyanin/azurin family
59696540Alpha amylase, catalytic domain
22222313Phorbol esters/diacylglycerol binding domain (C1 domain)
75868842Bacterial transferase hexapeptide (six repeats)
34845327tRNA synthetases class I (I, L, M and V)
76886641Cyclin, N-terminal domain
182822243124147Carboxylesterase family
44444424DNA polymerase family B
44444424ATP synthase subunit C
75766738Peroxidase
41971811463Beta-lactamase
22332214C-5 cytosine-specific DNA methylase
213126262422150Calcineurin-like phosphoesterase
141661413568Cellulase (glycosyl hydrolase family 5)
710788747tRNA synthetases class II (D, K and N)
383740424136234Mitochondrial carrier protein
112recA bacterial DNA recombination protein
1315920141283Aminotransferase class I and II
889109852Phosphoribosyl transferase domain
1011129101264Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111116Phosphoglycerate kinase
22222212Ribosomal protein S4/S9 N-terminal domain
21212210Ribosomal protein S12/S23
1113Bacterial regulatory helix-turn-helix proteins, AraC family
1111116Chaperonin 10 Kd subunit
11111111101165C2 domain
181718192019111PH domain
68896845bZIP transcription factor
162021311916123Aldehyde dehydrogenase family
11791921198186586Fungal Zn(2)-Cys(6) binuclear cluster domain
202022252318128Cytochrome b5-like Heme/Steroid binding domain
33345119Oxidoreductase molybdopterin binding domain
1112101714973Oxidoreductase NAD-binding domain
242726302619152SNF2 family N-terminal domain
22222212Ribosomal protein S7p/S5e
222521252323139Ubiquitin-conjugating enzyme
66797540Isocitrate/isopropylmalate dehydrogenase
22222212Ribosomal Proteins L2, RNA binding domain
1112117Hsp90 protein
22222212Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111116Dihydrofolate reductase
54636226Chitin recognition protein
33224216Cysteine-rich secretory protein family
1111116Ribosomal protein S3, C-terminal domain
77675335Cupin
22222212Annexin
1111217Eukaryotic-type carbonic anhydrase
11114Chalcone and stilbene synthases, N-terminal domain
333333182-oxoacid dehydrogenases acyltransferase (catalytic domain)
56574633Catalase
1111116Disintegrin
1214UDP-glucoronosyl and UDP-glucosyl transferase
678119546Aminotransferase class-III
22221211Ribosomal protein S19
1111116DNA gyrase B
49385433Thiamine pyrophosphate enzyme, central domain
44444323Lyase
22222212Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
325Sodium:neurotransmitter symporter family
1111116Adenylate and Guanylate cyclase catalytic domain
1111116ATP synthase delta (OSCP) subunit
1111116Orotidine 5'-phosphate decarboxylase / HUMPS family
1111116Indole-3-glycerol phosphate synthase
11Neurohypophysial hormones, N-terminal Domain
212218Aromatic amino acid lyase
1111116Pyruvate kinase, barrel domain
10131012131068Kinesin motor domain
283832312824181DnaJ domain
14141413141483Proteasome subunit
45767938Major intrinsic protein
1111116ATP synthase
33332115Glycosyl hydrolase family 1
11111163'5'-cyclic nucleotide phosphodiesterase
111115Profilin
1111127Ribosomal protein L22p/L17e
22212211Ribosomal protein L14p/L23e
1016111210968Ubiquitin family
54234422Cofilin/tropomyosin-type actin-binding protein
2222221214-3-3 protein
55446327Alkaline phosphatase
43738126Zinc carboxypeptidase
253521342419158Aldo/keto reductase family
19171411121386Myb-like DNA-binding domain
45444425Forkhead domain
1133513Glycosyl hydrolases family 32 N-terminal domain
1111116Ribosomal protein L16p/L10e
2123210Ribosomal protein S14p/S29e
44545527FKBP-type peptidyl-prolyl cis-trans isomerase
1111116Glutathione peroxidase
13121210
67786539Flavodoxin
22Protamine P1
1111116Calreticulin family
12136910555Common central domain of tyrosinase
89386640Aminotransferase class-V
1111116Ribonucleotide reductase, small chain
373952403839245DEAD/DEAH box helicase
707777827668450Helicase conserved C-terminal domain
11Serum albumin family
1111116EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22222212Ribosomal protein L23
1111116Pyridoxal-dependent decarboxylase, C-terminal sheet domain
21222211Ribosomal protein L5
67657637Pyridoxal-dependent decarboxylase conserved domain
32222213Citrate synthase, C-terminal domain
55554529GHMP kinases N terminal domain
76676638Biotin carboxylase, N-terminal domain
1111116Tryptophan synthase alpha chain
1111101212965Pyridoxal-phosphate dependent enzyme
14181415131387NUDIX domain
54566531pfkB family carbohydrate kinase
47674735Glycosyl hydrolases family 28
112Luciferase-like monooxygenase
22222212Ribosomal protein L3
22122211Ribosomal protein L11, RNA binding domain
1215101514975Histidine phosphatase superfamily (branch 1)
1111116Thymidylate synthase
112Lipoxygenase
44443423ATP synthase alpha/beta chain, C terminal domain
54453425Calponin homology (CH) domain
54543425Glutamine amidotransferases class-II
22222212Ribosomal protein S15
1111116Thaumatin family
2221119Fructose-1-6-bisphosphatase, N-terminal domain
1111116Ribonucleotide reductase, all-alpha domain
22222212Ribosomal protein S2
22222212SRF-type transcription factor (DNA-binding and dimerisation domain)
63565631GATA zinc finger
395432513326235Amino acid permease
43247424Prolyl oligopeptidase family
22222212Ribosomal protein L30p/L7e
81110912555Histidine phosphatase superfamily (branch 2)
1111116Respiratory-chain NADH dehydrogenase, 30 Kd subunit
54474428Aconitase family (aconitate hydratase)
43448225Glycosyl hydrolase family 10
45253423Glycosyl hydrolases family 17
22122211Ribosomal protein S5, N-terminal domain
1112117Nucleoside diphosphate kinase
11Tetraspanin family
1121229Ribosomal protein S10p/S20e
44455426Arrestin (or S-antigen), N-terminal domain
1111116Phosphoglucose isomerase
1111116Carbohydrate phosphorylase
1111116SecY translocase
1111116Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222212Ribosomal protein L6
43533321Polyprenyl synthetase
55545327Hexokinase
67975539Dynamin family
1111116Transcription factor TFIID (or TATA-binding protein, TBP)
44556327Rieske [2Fe-2S] domain
98996849Biotin-requiring enzyme
1111116Phosphofructokinase
22221211Ribosomal protein S17
1111116Hydroxymethylglutaryl-coenzyme A reductase
33333419FGGY family of carbohydrate kinases, N-terminal domain
112Sodium:dicarboxylate symporter family
911915111065Enoyl-CoA hydratase/isomerase
22222212Ribosomal protein S9/S16
22222212Transcription factor TFIIB repeat
68665637Cytidine and deoxycytidylate deaminase zinc-binding region
1111116Molybdopterin oxidoreductase
66276734Chromo (CHRromatin Organisation MOdifier) domain
22333215Phosphatidylinositol-specific phospholipase C, Y domain
22443217Phosphatidylinositol-specific phospholipase C, X domain
8971510756D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
22222111Malic enzyme, N-terminal domain
221222116-phosphogluconate dehydrogenase, C-terminal domain
1520916101181Multicopper oxidase
91010911958WW domain
1112117Ribosomal RNA adenine dimethylase
232119Yeast PIR protein repeat
118107103110100125663WD domain, G-beta repeat
44454425Heavy-metal-associated domain
11Transferrin
33433319Adenylate kinase
22322213Phosphoglucomutase/phosphomannomutase, C-terminal domain
1111228Ribosomal protein S8
2211118Ribosomal protein S11
43424421LIM domain
11215Matrixin
1121229Regulator of chromosome condensation (RCC1) repeat
21222211Ribosomal protein S13/S18
32212212chorismate binding enzyme
4435432360s Acidic ribosomal protein
44444929Prenyltransferase and squalene oxidase repeat
66567535Protein kinase C terminal domain
1111116Single-strand binding protein family
1111116S-adenosylmethionine synthetase, N-terminal domain
78788745Bromodomain
14151213141381Acyl-CoA dehydrogenase, C-terminal domain
16151716171495Ubiquitin carboxyl-terminal hydrolase
11114Ribosomal protein L36
22222212Ribonuclease T2 family
23332316HSF-type DNA-binding
22222212SRP54-type protein, GTPase domain
1111116Urease alpha-subunit, N-terminal domain
11161011111069Serine carboxypeptidase
88788847Phosphatidylinositol 3- and 4-kinase
13222111Transketolase, thiamine diphosphate binding domain
4432720Glycosyl hydrolases family 11
44445425Inositol monophosphatase family
44244422Glutaredoxin
35253321Isocitrate lyase family
22222212Serine hydroxymethyltransferase
45454224Iron-containing alcohol dehydrogenase
22222212Ribosomal protein L10
33634221KOW motif
1113Ribosomal protein L34
11Negative factor, (F-Protein) or Nef
22222212RF-1 domain
27342220Sodium:solute symporter family
1111116Imidazoleglycerol-phosphate dehydratase
1111116DNA polymerase family A
1111116IMP dehydrogenase / GMP reductase domain
1111116Glucose-6-phosphate dehydrogenase, NAD binding domain
66767537Protein phosphatase 2C
33332216Nucleotidyl transferase
35343321Carbonic anhydrase
111115Phosphoribulokinase / Uridine kinase family
45677433Fatty acid desaturase
66666636MutS domain V
1111116Delta-aminolevulinic acid dehydratase
45565328Arginase family
66666737MCM P-loop domain
22222111Squalene/phytoene synthase
11Bacterial extracellular solute-binding proteins, family 5 Middle
76978946FHA domain
414950644831283AMP-binding enzyme
44434322G-protein alpha subunit
9109106751HMG (high mobility group) box
12162316171195His Kinase A (phospho-acceptor) domain
33323216Armadillo/beta-catenin-like repeat
313128272319159Tetratricopeptide repeat
33322417Ion transport protein
1111116DNA gyrase/topoisomerase IV, subunit A
12111112121068BRCA1 C Terminus (BRCT) domain
710786745Glycosyl transferases group 1
34833829Glycosyl transferase family 2
41514318SAM domain (Sterile alpha motif)
1111116linker histone H1 and H5 family
1111116Ribosomal protein L7/L12 C-terminal domain
11253214Pectate lyase
221128ribonuclease
1111116Urease, gamma subunit
44444424CoA-ligase
25252542235145Phosphopantetheine attachment site
33323216Formyl transferase
711799750Metallopeptidase family M24
11171514131585Leucine Rich Repeat
295321484221214alpha/beta hydrolase fold
33333318RNA polymerase Rpb2, domain 6
43334421PB1 domain
21222211Staphylococcal nuclease homologue
1211101291165Rab-GTPase-TBC domain
1111116Tudor domain
1111116WH1 domain
43346424Zinc finger, ZZ type
22222111HRDC domain
81091191259CBS domain
22222212Ribosomal protein L13
22222212Ribosomal protein L4/L1 family
111115Clp protease
43333420S1 RNA binding domain
11114HIUase/Transthyretin family
45756431AhpC/TSA family
44454425tRNA synthetases class I (W and Y)
1211117UvrD/REP helicase N-terminal domain
45344525Rhodanese-like domain
21221210Universal stress protein family
355232453630230Acetyltransferase (GNAT) family
1111116SecE/Sec61-gamma subunits of protein translocation complex
1111116C-terminal regulatory domain of Threonine dehydratase
22222212AIR synthase related protein, N-terminal domain
87988848tRNA synthetase class II core domain (G, H, P, S and T)
22222212SpoU rRNA Methylase family
112Phage integrase family
22222212Tetrapyrrole (Corrin/Porphyrin) Methylases
1111116Glycosyl transferase family, a/b domain
1122118PDZ domain
475126236Class II Aldolase and Adducin N-terminal domain
34444423Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
55554428Fes/CIP4, and EFC/F-BAR homology domain
56665432IQ calmodulin-binding motif
22222212Phosphoinositide 3-kinase family, accessory domain (PIK domain)
65547532Phospholipase D Active site motif
1111116Regulator of G protein signaling domain
33333318GTPase-activator protein for Ras-like GTPase
44444424RasGEF domain
44344423RasGEF N-terminal motif
88888949RhoGAP domain
67666637RhoGEF domain
24324217SPRY domain
33333318RNA polymerase Rpb1, domain 2
1111116Guanylate kinase
43342420Gelsolin repeat
891097952UBA/TS-N domain
18161615151898PHD-finger
111115GGL domain
55555631HECT-domain (ubiquitin-transferase)
33232215Helix-hairpin-helix motif
1111116MSP (Major sperm protein) domain
64448531Ribonuclease III domain
22122211Region in Clathrin and VPS
22222212RanBP1 domain
22222111PPIC-type PPIASE domain
1111138Zn-finger in Ran binding protein and others
15202016131498Zinc finger C-x8-C-x5-C-x3-H type (and similar)
31122312Poly(ADP-ribose) polymerase catalytic domain
111115Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
4211472705130379F-box domain
1111116Elongation factor 1 gamma, conserved domain
33331316Calpain family cysteine protease
22127Copper fist DNA binding domain
65455530CRAL/TRIO domain
103261612480BTB/POZ domain
2226Ricin-type beta-trefoil lectin domain
1111116Inhibitor of Apoptosis domain
44444525Voltage gated chloride channel
22252114Caspase domain
111310278776GDSL-like Lipase/Acylhydrolase
1111116Poly-adenylate binding protein, unique domain
111115POLO box duplicated region
152418261915117ABC transporter transmembrane region
33Integrase core domain
56585433FAD binding domain
69151710259Condensation domain
1111116S-adenosyl-L-homocysteine hydrolase, NAD binding domain
1111116HAMP domain
22222212ribosomal L5P family C-terminus
55564631Insulinase (Peptidase family M16)
33333318Dehydrogenase E1 component
1111116Lumazine binding domain
66566635Elongation factor G C-terminus
11Viral RNA-dependent RNA polymerase
11Plectin repeat
54444425HMGL-like
43444423DnaJ central domain
3122311Starch binding domain
22232213Ribosomal protein L1p/L10e family
66789642Cation transporting ATPase, C-terminus
88798747Cation transporter/ATPase, N-terminus
1211117dUTPase
54473427Aconitase C-terminal domain
34343320Amino acid kinase family
1111116N-(5'phosphoribosyl)anthranilate (PRA) isomerase
19322038222133Acyl transferase domain
1111116Urease beta subunit
36586331Dihydrodipicolinate synthetase family
313232353429193haloacid dehalogenase-like hydrolase
446710233Glycosyl hydrolases family 2
6991413556Glycosyl hydrolases family 18
111115Proliferating cell nuclear antigen, N-terminal domain
111115Acylphosphatase
1111116Adenylosuccinate synthetase
21133111Asparaginase, N-terminal
13122312Peptidase S24-like
1111116Inorganic pyrophosphatase
1210998957Glycosyl hydrolases family 16
43243117Glycosyl hydrolases family 15
376126337NADH:flavin oxidoreductase / NADH oxidase family
222332143-hydroxyacyl-CoA dehydrogenase, C-terminal domain
35343119Glycosyl hydrolase family 20, catalytic domain
44444424HhH-GPD superfamily base excision DNA repair protein
1111116AIR carboxylase
24292634335151GMC oxidoreductase
32222213Asparagine synthase
14109121055Fungal cellulose binding domain
66665534Septin
1111116EF-1 guanine nucleotide exchange domain
1111116Homoserine dehydrogenase
135413Flavin-binding monooxygenase-like
34333319tRNA synthetases class I (E and Q), catalytic domain
23222112tRNA synthetases class I (R)
43443422XPG N-terminal domain
121351315664Metallo-beta-lactamase superfamily
1214F5/8 type C domain
22342215Choline/Carnitine o-acyltransferase
1111116Putative esterase
11Glycosyl hydrolase family 9
1111116Ferrochelatase
22122211Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1111116Arginosuccinate synthase
1111116Electron transfer flavoprotein FAD-binding domain
33333318RNB domain
46473327Dioxygenase
33333318CNH domain
22122211Diacylglycerol kinase catalytic domain
610277739Dual specificity phosphatase, catalytic domain
77
33232215P21-Rho-binding domain
14121210131374PX domain
32222415Ras association (RalGDS/AF-6) domain
56566533UBX domain
43444423VHS domain
1111116Phosphoinositide 3-kinase C2
32322214DAHP synthetase I family
71391010655Carbon-nitrogen hydrolase
2222210N-acetyltransferase
1111116Prephenate dehydratase
45345425Syntaxin
55555530Pumilio-family RNA binding repeat
77675638Histone-like transcription factor (CBF/NF-Y) and archaeal histone
1111116Pterin binding enzyme
22222212ER lumen protein retaining receptor
22222212tRNA N6-adenosine threonylcarbamoyltransferase
1121218Histidinol dehydrogenase
44344423impB/mucB/samB family
1111116
111115Ribosomal L15
1111116Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
1111116Ribosomal L28 family
1111116Ribosomal L29 protein
11114Ribosomal L39 protein
1111116Ribosomal S17
1111116Ribulose-phosphate 3 epimerase family
1111116Translationally controlled tumour protein
34345221Glycosyl hydrolase family 7
1111116RNA pseudouridylate synthase
44444525Histone deacetylase domain
45848332POT family
2111117PWWP domain
17241226209108SET domain
616101211459Isochorismatase family
34434321Permease family
1111116Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
43646427XPG I-region
111115Acetokinase family
1333313DNA photolyase
11NlpC/P60 family
11Cation-independent mannose-6-phosphate receptor repeat
11Nitroreductase family
15283221Sulfatase
11111166,7-dimethyl-8-ribityllumazine synthase
111115Ribosomal protein S16
22122211Acyl CoA binding protein
44344423Cullin family
101521511760FAD binding domain
122562816289O-methyltransferase domain
34544424EamA-like transporter family
22222212
88888848ThiF family
1111116Ribosomal family S4e
39356733Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
36535426Ammonium Transporter Family
44666531Sulfate permease family
1111116MATH domain
12232212Dehydratase family
13131110Transaldolase/Fructose-6-phosphate aldolase
23122212Mechanosensitive ion channel
1121117GTP cyclohydrolase II
11111163,4-dihydroxy-2-butanone 4-phosphate synthase
34344422Adaptor complexes medium subunit family
56696638Exonuclease
21223313Dipeptidyl peptidase IV (DPP IV) N-terminal region
516NB-ARC domain
1015121715776Glycosyl hydrolase family 3 N terminal domain
1111116Ribosomal protein L44
11Sodium:sulfate symporter transmembrane region
1111116DNA-dependent RNA polymerase
22212110FAD binding domain in molybdopterin dehydrogenase
1111116Glycosyl transferase family 4
21222211HCO3- transporter family
22222212Nucleosome assembly protein (NAP)
44444424Synaptobrevin
1111116GMP synthase C terminal domain
11Phage lysozyme
56646431Adenosine/AMP deaminase
875109443Oxidoreductase FAD-binding domain
264104127Thioesterase domain
22212211Histidine biosynthesis protein
33333318Glycosyltransferase family 20
311117UDP-glucose/GDP-mannose dehydrogenase family, central domain
22222212Carbamoyl-phosphate synthase small chain, CPSase domain
23121211PAS fold
112Diguanylate cyclase, GGDEF domain
22122211Probable molybdopterin binding domain
44444424Sec1 family
22222212GDP dissociation inhibitor
76359535Sodium/hydrogen exchanger family
22222212RNA polymerase Rpb3/RpoA insert domain
55455529Initiation factor 2 subunit family
2136PQQ enzyme repeat
2222210Electron transfer flavoprotein domain
1111116Uricase
1111116Ribosomal S3Ae family
1111116Ribosomal L27 protein
1131118GTP1/OBG
22232213Gamma-glutamyltranspeptidase
111115Ribosomal L40e family
1111116GrpE
22232213TatD related DNase
1111116Inhibitor of apoptosis-promoting Bax1