PFAM Domains • Acephala macrosclerotiorum EW76-UTF0540 v1.0
Annotations/GenomesAcema1Ascsa1Cadsp1Chalo1Marbr1Melbi2Phisc1Rhier1TotalAnnotation Description
PFAMs
11,8838,06814,03212,9827,17511,47112,05610,11587,782
111147 transmembrane receptor (rhodopsin family)
8252677138756356504ATPase family associated with various cellular activities (AAA)
5147828433646155477ABC transporter
4444444432ATP synthase alpha/beta family, nucleotide-binding domain
1414161414141514115Elongation factor Tu GTP binding domain
2014181910161719133Helix-loop-helix DNA-binding domain
7495344541Hsp20/alpha crystallin family
1271278810872Hsp70 protein
9913121110121288KH domain
11Ribulose bisphosphate carboxylase large chain, catalytic domain
11111117SH2 domain
2522272722292527204SH3 domain
101010101010101080Actin
19781194183272551351551,227Ankyrin repeat
5366166437PAN domain
7877778758ADP-ribosylation factor family
2613265010243327209Eukaryotic aspartyl protease
4454444433Cyclic nucleotide-binding domain
11Cytochrome b(C-terminal)/b6/petD
1112112110Cytochrome c
2223233320Double-stranded RNA binding motif
2217242119171920159EF hand
12112111104Fe-4S binding domain
2284224226Fibronectin type III domain
112Globin
1913263111212521167Glutathione S-transferase, C-terminal domain
1111122110Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
11Hemopexin
961311789871Homeodomain
4243244326lactate/malate dehydrogenase, NAD binding domain
5555545539Myosin head (motor domain)
18244214232461682261131,225Cytochrome P450
1851201901551041801521581,244Protein kinase domain
2920383314253021210Pyridine nucleotide-disulphide oxidoreductase
2923342923332628225Ras family
2918293118253127208Response regulator receiver domain
6615368448RNase H
6362696663686561517RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
11718Reverse transcriptase (RNA-dependent DNA polymerase)
1113Serpin (serine protease inhibitor)
2222222216Copper/zinc superoxide dismutase (SODC)
2121212314Iron/manganese superoxide dismutases, alpha-hairpin domain
2553619813188132Subtilase family
1316120615946138136104981Sugar (and other) transporter
1712131612141713114Thioredoxin
1131323216Trypsin
4444444432Tubulin/FtsZ family, GTPase domain
9356295544von Willebrand factor type A domain
1376614815155139110116922Zinc finger, C2H2 type
6048655942595951443Zinc finger, C3HC4 type (RING finger)
68811127860Zinc knuckle
2323222218Protein-tyrosine phosphatase
11Somatotropin hormone family
189133303271671752161361,490short chain dehydrogenase
9757144135369411961743Zinc-binding dehydrogenase
7687677755Thiolase, N-terminal domain
275253010323313175Beta-ketoacyl synthase, N-terminal domain
73884888542Fe-2S iron-sulfur cluster binding domain
112Papain family cysteine protease
2312122215Enolase, C-terminal TIM barrel domain
1191088710871Glutamine amidotransferase class-I
101011101010101081TCP-1/cpn60 chaperonin family
4375456438Glutamine synthetase, catalytic domain
2122222215Triosephosphate isomerase
1913231815231417142E1-E2 ATPase
9810101698878Core histone H2A/H2B/H3/H4
12115Copper binding proteins, plastocyanin/azurin family
10678578758Alpha amylase, catalytic domain
2222222216Phorbol esters/diacylglycerol binding domain (C1 domain)
8777889761Bacterial transferase hexapeptide (six repeats)
3333334325tRNA synthetases class I (I, L, M and V)
76117768759Cyclin, N-terminal domain
6517835821436430381Carboxylesterase family
444444428DNA polymerase family B
6566566646ATP synthase subunit C
5496558446Peroxidase
13633292252814150Beta-lactamase
5456446842C-5 cytosine-specific DNA methylase
3727293421353629248Calcineurin-like phosphoesterase
2216263211192319168Cellulase (glycosyl hydrolase family 5)
7787777858tRNA synthetases class II (D, K and N)
4136474136414241325Mitochondrial carrier protein
11114recA bacterial DNA recombination protein
2312262012162314146Aminotransferase class I and II
116101181110976Phosphoribosyl transferase domain
101010101010101080Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
111111219Phosphoglycerate kinase
2222222216Ribosomal protein S4/S9 N-terminal domain
2222222216Ribosomal protein S12/S23
111115Bacterial regulatory helix-turn-helix proteins, AraC family
111111118Chaperonin 10 Kd subunit
1210191615141313112C2 domain
1819191919192019152PH domain
128121091114985bZIP transcription factor
2616362915262320191Aldehyde dehydrogenase family
343180483527923294202582,632Fungal Zn(2)-Cys(6) binuclear cluster domain
2920332719253024207Cytochrome b5-like Heme/Steroid binding domain
6163235329Oxidoreductase molybdopterin binding domain
1813252011172115140Oxidoreductase NAD-binding domain
3630333124423237265SNF2 family N-terminal domain
2212222215Ribosomal protein S7p/S5e
2622242421272624194Ubiquitin-conjugating enzyme
86107777759Isocitrate/isopropylmalate dehydrogenase
2222222216Ribosomal Proteins L2, RNA binding domain
111111118Hsp90 protein
2222222216Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1211122111Dihydrofolate reductase
13510155812371Chitin recognition protein
5365345435Cysteine-rich secretory protein family
111111118Ribosomal protein S3, C-terminal domain
10137248549Cupin
2212222215Annexin
34132215Eukaryotic-type carbonic anhydrase
1121121110Chalcone and stilbene synthases, N-terminal domain
33333434262-oxoacid dehydrogenases acyltransferase (catalytic domain)
104810278857Catalase
1122221112Disintegrin
6246147232UDP-glucoronosyl and UDP-glucosyl transferase
13717881314787Aminotransferase class-III
2222222216Ribosomal protein S19
111111118DNA gyrase B
971287912973Thiamine pyrophosphate enzyme, central domain
5345354433Lyase
2222232217Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
11Sodium:neurotransmitter symporter family
1122122213Adenylate and Guanylate cyclase catalytic domain
111111118ATP synthase delta (OSCP) subunit
2122113113Orotidine 5'-phosphate decarboxylase / HUMPS family
111111118Indole-3-glycerol phosphate synthase
1221118Aromatic amino acid lyase
111211119Pyruvate kinase, barrel domain
101012121012111289Kinesin motor domain
4033373129353732274DnaJ domain
1414141414141414112Proteasome subunit
136141381012884Major intrinsic protein
111111118ATP synthase
6484345438Glycosyl hydrolase family 1
1111111183'5'-cyclic nucleotide phosphodiesterase
11Protease inhibitor/seed storage/LTP family
111111118Profilin
111111118Ribosomal protein L22p/L17e
2222222216Ribosomal protein L14p/L23e
1913212214171821145Ubiquitin family
5555555540Cofilin/tropomyosin-type actin-binding protein
222222221614-3-3 protein
5264433229Alkaline phosphatase
1141411114Zinc carboxypeptidase
5132815521495940388Aldo/keto reductase family
1416161713171919131Myb-like DNA-binding domain
4444454433Forkhead domain
2162133422Glycosyl hydrolases family 32 N-terminal domain
111111118Ribosomal protein L16p/L10e
2221222215Ribosomal protein S14p/S29e
3355343329FKBP-type peptidyl-prolyl cis-trans isomerase
111111118Glutathione peroxidase
2222222216
11Dehydrin
961212689971Flavodoxin
111111118Calreticulin family
21518201211177111Common central domain of tyrosinase
11101112911111085Aminotransferase class-V
111111118Ribonucleotide reductase, small chain
4043474241424343341DEAD/DEAH box helicase
8683888678918591688Helicase conserved C-terminal domain
1211121110EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
2122222215Ribosomal protein L23
111111118Pyridoxal-dependent decarboxylase, C-terminal sheet domain
2222222216Ribosomal protein L5
7686488653Pyridoxal-dependent decarboxylase conserved domain
2352232221Citrate synthase, C-terminal domain
5557555542GHMP kinases N terminal domain
6588577753Biotin carboxylase, N-terminal domain
111111118Tryptophan synthase alpha chain
131015111011161096Pyridoxal-phosphate dependent enzyme
1615261915211819149NUDIX domain
5555479545pfkB family carbohydrate kinase
21820225162413129Glycosyl hydrolases family 28
42411517Luciferase-like monooxygenase
2222222216Ribosomal protein L3
2222222216Ribosomal protein L11, RNA binding domain
2118221915172114147Histidine phosphatase superfamily (branch 1)
111111118Thymidylate synthase
132111312Lipoxygenase
4444444432ATP synthase alpha/beta chain, C terminal domain
5555555540Calponin homology (CH) domain
5566445439Glutamine amidotransferases class-II
2222222216Ribosomal protein S15
2213122114Thaumatin family
111111118Fructose-1-6-bisphosphatase, N-terminal domain
111211119Ribonucleotide reductase, all-alpha domain
2222222216Ribosomal protein S2
62112262334SRF-type transcription factor (DNA-binding and dimerisation domain)
89896119969GATA zinc finger
7639706431618145467Amino acid permease
4458235435Prolyl oligopeptidase family
2222112214Ribosomal protein L30p/L7e
1291213812151091Histidine phosphatase superfamily (branch 2)
111111118Respiratory-chain NADH dehydrogenase, 30 Kd subunit
5575445540Aconitase family (aconitate hydratase)
7487447243Glycosyl hydrolase family 10
6445447438Glycosyl hydrolases family 17
2222222216Ribosomal protein S5, N-terminal domain
112111119Nucleoside diphosphate kinase
112Tetraspanin family
2222122215Ribosomal protein S10p/S20e
5457454539Arrestin (or S-antigen), N-terminal domain
111111118Phosphoglucose isomerase
111111118Carbohydrate phosphorylase
111111118SecY translocase
1121112110Respiratory-chain NADH dehydrogenase, 49 Kd subunit
2222222216Ribosomal protein L6
3433434428Polyprenyl synthetase
4544354433Hexokinase
11111395119675Dynamin family
111111118Transcription factor TFIID (or TATA-binding protein, TBP)
5465256639Rieske [2Fe-2S] domain
113411213Phytochrome region
11Proton-conducting membrane transporter
9711107109972Biotin-requiring enzyme
111111118Phosphofructokinase
2222221215Ribosomal protein S17
1221222113Hydroxymethylglutaryl-coenzyme A reductase
4444445433FGGY family of carbohydrate kinases, N-terminal domain
112Sodium:dicarboxylate symporter family
15924188161512117Enoyl-CoA hydratase/isomerase
2222222216Ribosomal protein S9/S16
2222222216Transcription factor TFIIB repeat
118121081010978Cytidine and deoxycytidylate deaminase zinc-binding region
211111119Molybdopterin oxidoreductase
127128711111482Chromo (CHRromatin Organisation MOdifier) domain
3333332222Phosphatidylinositol-specific phospholipase C, Y domain
5433334227Phosphatidylinositol-specific phospholipase C, X domain
129169611121186D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
3333233323Malic enzyme, N-terminal domain
22321222166-phosphogluconate dehydrogenase, C-terminal domain
27827298323316180Multicopper oxidase
11Granulin
1881215810131094WW domain
111111118Ribosomal RNA adenine dimethylase
1111212110Yeast PIR protein repeat
125110163113101135119132998WD domain, G-beta repeat
6587595651Heavy-metal-associated domain
4453546435Adenylate kinase
3222323219Phosphoglucomutase/phosphomannomutase, C-terminal domain
2221212113Ribosomal protein S8
111111118Ribosomal protein S11
4444444432LIM domain
314Matrixin
2334233323Regulator of chromosome condensation (RCC1) repeat
2222222216Ribosomal protein S13/S18
11
2222235321chorismate binding enzyme
434333332660s Acidic ribosomal protein
5444455536Prenyltransferase and squalene oxidase repeat
6685657649Protein kinase C terminal domain
111111118Single-strand binding protein family
111111118S-adenosylmethionine synthetase, N-terminal domain
107109899870Bromodomain
171121158131514114Acyl-CoA dehydrogenase, C-terminal domain
1515151515151515120Ubiquitin carboxyl-terminal hydrolase
1111116Ribosomal protein L36
4343344328Ribonuclease T2 family
3334333325HSF-type DNA-binding
2222222216SRP54-type protein, GTPase domain
111111118Urease alpha-subunit, N-terminal domain
1591922516198113Serine carboxypeptidase
11Scorpion short toxin, BmKK2
11Apoptosis regulator proteins, Bcl-2 family
8888888864Phosphatidylinositol 3- and 4-kinase
3363143326Transketolase, thiamine diphosphate binding domain
6248257438Glycosyl hydrolases family 11
4334334327Inositol monophosphatase family
4444444432Glutaredoxin
8395256341Isocitrate lyase family
2242222218Serine hydroxymethyltransferase
7535347640Iron-containing alcohol dehydrogenase
2222222216Ribosomal protein L10
3423323222KOW motif
11111117Ribosomal protein L34
2222222216RF-1 domain
5364248436Sodium:solute symporter family
111112119Imidazoleglycerol-phosphate dehydratase
11111117DNA polymerase family A
111111118IMP dehydrogenase / GMP reductase domain
111111118Glucose-6-phosphate dehydrogenase, NAD binding domain
5777666751Protein phosphatase 2C
2223232319Nucleotidyl transferase
657132810859Carbonic anhydrase
111111118Phosphoribulokinase / Uridine kinase family
1171297108872Fatty acid desaturase
6666666648MutS domain V
111111118Delta-aminolevulinic acid dehydratase
5568354642Arginase family
6666666648MCM P-loop domain
3322232219Squalene/phytoene synthase
81181010109975FHA domain
5530736525636347421AMP-binding enzyme
3336344632G-protein alpha subunit
981187811870HMG (high mobility group) box
2315262715222723178His Kinase A (phospho-acceptor) domain
3333333324Armadillo/beta-catenin-like repeat
4134443323463542298Tetratricopeptide repeat
6235242428Ion transport protein
111111118DNA gyrase/topoisomerase IV, subunit A
141112111111101191BRCA1 C Terminus (BRCT) domain
1061099911670Glycosyl transferases group 1
6397379448Glycosyl transferase family 2
2293344431SAM domain (Sterile alpha motif)
111111118linker histone H1 and H5 family
111111118Ribosomal protein L7/L12 C-terminal domain
4116191133Pectate lyase
1114111212ribonuclease
111111118Urease, gamma subunit
4445444433CoA-ligase
2011222610293016164Phosphopantetheine attachment site
3333343325Formyl transferase
991110710101177Metallopeptidase family M24
2012171813171417128Leucine Rich Repeat
65479110830519248532alpha/beta hydrolase fold
3333333324RNA polymerase Rpb2, domain 6
4334444430PB1 domain
2232222217Staphylococcal nuclease homologue
11101110910111183Rab-GTPase-TBC domain
111111118Tudor domain
111111118WH1 domain
5547466441Zinc finger, ZZ type
11111139HRDC domain
1191110101011981CBS domain
2222222216Ribosomal protein L13
2222222216Ribosomal protein L4/L1 family
111111118Clp protease
3435433328S1 RNA binding domain
111111118HIUase/Transthyretin family
7347388545AhpC/TSA family
5444556437tRNA synthetases class I (W and Y)
2122222114UvrD/REP helicase N-terminal domain
7474657646Rhodanese-like domain
2222332218Universal stress protein family
6747769428697155507Acetyltransferase (GNAT) family
111111118SecE/Sec61-gamma subunits of protein translocation complex
111111118C-terminal regulatory domain of Threonine dehydratase
2232222318AIR synthase related protein, N-terminal domain
8989998868tRNA synthetase class II core domain (G, H, P, S and T)
111111118SpoU rRNA Methylase family
2222222216Tetrapyrrole (Corrin/Porphyrin) Methylases
111111118Glycosyl transferase family, a/b domain
11Vitamin K-dependent carboxylation/gamma-carboxyglutamic (GLA) domain
112111119PDZ domain
1131474510559Class II Aldolase and Adducin N-terminal domain
4444442430Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
5555555540Fes/CIP4, and EFC/F-BAR homology domain
5564545539IQ calmodulin-binding motif
2222222216Phosphoinositide 3-kinase family, accessory domain (PIK domain)
4576475543Phospholipase D Active site motif
2122112213Regulator of G protein signaling domain
4444444432GTPase-activator protein for Ras-like GTPase
4474454436RasGEF domain
4464454435RasGEF N-terminal motif
98998891070RhoGAP domain
6665676749RhoGEF domain
3335334428SPRY domain
3333333425RNA polymerase Rpb1, domain 2
2222222216Guanylate kinase
5454544334Gelsolin repeat
5755647544UBA/TS-N domain
2218232114212022161PHD-finger
111111118GGL domain
6666666648HECT-domain (ubiquitin-transferase)
2222222216Helix-hairpin-helix motif
1121211211MSP (Major sperm protein) domain
5366554640Ribonuclease III domain
2223222217Region in Clathrin and VPS
3333332323RanBP1 domain
2222222216PPIC-type PPIASE domain
3345334429Zn-finger in Ran binding protein and others
1820182214251920156Zinc finger C-x8-C-x5-C-x3-H type (and similar)
5124235325Poly(ADP-ribose) polymerase catalytic domain
111111118Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
9053938339759781611F-box domain
111111118Elongation factor 1 gamma, conserved domain
5356265638Calpain family cysteine protease
333322319Copper fist DNA binding domain
5565556542CRAL/TRIO domain
4321474618323133271BTB/POZ domain
236155426Ricin-type beta-trefoil lectin domain
112111119Inhibitor of Apoptosis domain
4344344430Voltage gated chloride channel
72482105644Caspase domain
1310311712181212125GDSL-like Lipase/Acylhydrolase
111111118Poly-adenylate binding protein, unique domain
11111117POLO box duplicated region
2520405315313127242ABC transporter transmembrane region
1111Integrase core domain
951285710864FAD binding domain
104111131012465Condensation domain
111111118S-adenosyl-L-homocysteine hydrolase, NAD binding domain
111111219HAMP domain
2222222216ribosomal L5P family C-terminus
7666467648Insulinase (Peptidase family M16)
3333343325Dehydrogenase E1 component
111111118Lumazine binding domain
6666666648Elongation factor G C-terminus
4455444535HMGL-like
4444444432DnaJ central domain
4323233424Starch binding domain
2222232419Ribosomal protein L1p/L10e family
1061297127972Cation transporting ATPase, C-terminus
118141081191081Cation transporter/ATPase, N-terminus
1122121111dUTPase
5575445540Aconitase C-terminal domain
4333334326Amino acid kinase family
111111118N-(5'phosphoribosyl)anthranilate (PRA) isomerase
235263010293513171Acyl transferase domain
111111118Urease beta subunit
9396369550Dihydrodipicolinate synthetase family
4334484233443739320haloacid dehalogenase-like hydrolase
661113266454Glycosyl hydrolases family 2
191126237241710137Glycosyl hydrolases family 18
111111118Proliferating cell nuclear antigen, N-terminal domain
1111116Acylphosphatase
4112111112Adenylosuccinate synthetase
2241112114Asparaginase, N-terminal
3213233320Peptidase S24-like
111111118Inorganic pyrophosphatase
121316176131211100Glycosyl hydrolases family 16
3333333324Glycosyl hydrolases family 15
137171931213791NADH:flavin oxidoreductase / NADH oxidase family
23551354283-hydroxyacyl-CoA dehydrogenase, C-terminal domain
3134233221Glycosyl hydrolase family 20, catalytic domain
4434343429HhH-GPD superfamily base excision DNA repair protein
111111118AIR carboxylase
427454719264015241GMC oxidoreductase
2242222218Asparagine synthase
1831281512131911147Fungal cellulose binding domain
6675756547Septin
111112119EF-1 guanine nucleotide exchange domain
2112111110Homoserine dehydrogenase
6210447235Flavin-binding monooxygenase-like
11LPXTG cell wall anchor motif
3344354329tRNA synthetases class I (E and Q), catalytic domain
1144141420tRNA synthetases class I (R)
4444444432XPG N-terminal domain
151027227141812125Metallo-beta-lactamase superfamily
3126F5/8 type C domain
322224