PFAM Domains • Massariosphaeria phaeospora CBS 611.86 v1.0
Annotations/GenomesAaoar1Amnli1Delco1Masph1Ophdi1Spofi1TotalAnnotation Description
PFAMs
10,1239,4207,59210,7419,8847,24555,005
505545575241300ATPase family associated with various cellular activities (AAA)
585033444333261ABC transporter
44444424ATP synthase alpha/beta family, nucleotide-binding domain
1113EGF-like domain
14151416141487Elongation factor Tu GTP binding domain
1013101011862Helix-loop-helix DNA-binding domain
33433218Hsp20/alpha crystallin family
978138752Hsp70 protein
810878950KH domain
111115SH2 domain
222221142722128SH3 domain
10101011101061Actin
71113502812636424Ankyrin repeat
2519522PAN domain
77787743ADP-ribosylation factor family
101263010977Eukaryotic aspartyl protease
44444424Cyclic nucleotide-binding domain
1111116Cytochrome c
1111329Double-stranded RNA binding motif
1720174181490EF hand
1111154Fe-4S binding domain
33212213Fibronectin type III domain
1111116Globin
1418131417783Glutathione S-transferase, C-terminal domain
2111117Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
109669848Homeodomain
53334321lactate/malate dehydrogenase, NAD binding domain
112Low-density lipoprotein receptor repeat class B
45544426Myosin head (motor domain)
1341359515115152718Cytochrome P450
164196107161160104892Protein kinase domain
14231614211199Pyridine nucleotide-disulphide oxidoreductase
242423272623147Ras family
222415192819127Response regulator receiver domain
2164215RNase H
576062536261355RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
33233317Copper/zinc superoxide dismutase (SODC)
22232213Iron/manganese superoxide dismutases, alpha-hairpin domain
141772312982Subtilase family
1397145546935413Sugar (and other) transporter
13111111101066Thioredoxin
21222110Trypsin
44444424Tubulin/FtsZ family, GTPase domain
35216320von Willebrand factor type A domain
757157207957359Zinc finger, C2H2 type
60874687460335Zinc finger, C3HC4 type (RING finger)
497361140Zinc knuckle
24222214Protein-tyrosine phosphatase
1791649613217585831short chain dehydrogenase
867341627943384Zinc-binding dehydrogenase
76666637Thiolase, N-terminal domain
23271824189119Beta-ketoacyl synthase, N-terminal domain
766364322Fe-2S iron-sulfur cluster binding domain
112Papain family cysteine protease
1111116Enolase, C-terminal TIM barrel domain
108988851Glutamine amidotransferase class-I
10101010101060TCP-1/cpn60 chaperonin family
43333319Glutamine synthetase, catalytic domain
22222212Triosephosphate isomerase
201713211715103E1-E2 ATPase
778179856Core histone H2A/H2B/H3/H4
112Copper binding proteins, plastocyanin/azurin family
108565337Alpha amylase, catalytic domain
22222212Phorbol esters/diacylglycerol binding domain (C1 domain)
68787642Bacterial transferase hexapeptide (six repeats)
53374325tRNA synthetases class I (I, L, M and V)
77788643Cyclin, N-terminal domain
332718203112141Carboxylesterase family
44444424DNA polymerase family B
44444424ATP synthase subunit C
57756636Peroxidase
141041315561Beta-lactamase
44233319C-5 cytosine-specific DNA methylase
293221232725157Calcineurin-like phosphoesterase
161214129669Cellulase (glycosyl hydrolase family 5)
77778844tRNA synthetases class II (D, K and N)
434138404038240Mitochondrial carrier protein
112recA bacterial DNA recombination protein
291913211514111Aminotransferase class I and II
98859847Phosphoribosyl transferase domain
10111010111062Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111116Phosphoglycerate kinase
22222212Ribosomal protein S4/S9 N-terminal domain
22222212Ribosomal protein S12/S23
111115Bacterial regulatory helix-turn-helix proteins, AraC family
1111116Chaperonin 10 Kd subunit
1212119111166C2 domain
191818102019104PH domain
11861210653bZIP transcription factor
402016202014130Aldehyde dehydrogenase family
332204117167212961,128Fungal Zn(2)-Cys(6) binuclear cluster domain
252320222621137Cytochrome b5-like Heme/Steroid binding domain
53335322Oxidoreductase molybdopterin binding domain
20161113191493Oxidoreductase NAD-binding domain
272624282723155SNF2 family N-terminal domain
22222212Ribosomal protein S7p/S5e
252422262722146Ubiquitin-conjugating enzyme
107667642Isocitrate/isopropylmalate dehydrogenase
22222212Ribosomal Proteins L2, RNA binding domain
1111116Hsp90 protein
22222212Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111217Dihydrofolate reductase
81157211870Chitin recognition protein
43334219Cysteine-rich secretory protein family
1111116Ribosomal protein S3, C-terminal domain
55776333Cupin
22222212Annexin
1112218Eukaryotic-type carbonic anhydrase
112Chalcone and stilbene synthases, N-terminal domain
333333182-oxoacid dehydrogenases acyltransferase (catalytic domain)
55566431Catalase
1111116Disintegrin
111216UDP-glucoronosyl and UDP-glucosyl transferase
1110677546Aminotransferase class-III
22222212Ribosomal protein S19
1111116DNA gyrase B
96466536Thiamine pyrophosphate enzyme, central domain
54444425Lyase
22222212Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
21115Sodium:neurotransmitter symporter family
1111116Adenylate and Guanylate cyclase catalytic domain
1111116ATP synthase delta (OSCP) subunit
1211218Orotidine 5'-phosphate decarboxylase / HUMPS family
1111116Indole-3-glycerol phosphate synthase
112116Aromatic amino acid lyase
1111116Pyruvate kinase, barrel domain
12101010111063Kinesin motor domain
323628263837197DnaJ domain
14141414141484Proteasome subunit
86459436Major intrinsic protein
1111116ATP synthase
62333219Glycosyl hydrolase family 1
11111163'5'-cyclic nucleotide phosphodiesterase
1111116Profilin
1112117Ribosomal protein L22p/L17e
22222212Ribosomal protein L14p/L23e
1213101112967Ubiquitin family
54555529Cofilin/tropomyosin-type actin-binding protein
2223221314-3-3 protein
45536427Alkaline phosphatase
76459637Zinc carboxypeptidase
352825273318166Aldo/keto reductase family
1214197151582Myb-like DNA-binding domain
44444424Forkhead domain
4311211Glycosyl hydrolases family 32 N-terminal domain
1112117Ribosomal protein L16p/L10e
32223315Ribosomal protein S14p/S29e
54445426FKBP-type peptidyl-prolyl cis-trans isomerase
1111116Glutathione peroxidase
221218
97678542Flavodoxin
11Protamine P1
1111116Calreticulin family
152012161621100Common central domain of tyrosinase
86889746Aminotransferase class-V
1111116Ribonucleotide reductase, small chain
413637434238237DEAD/DEAH box helicase
786970748169441Helicase conserved C-terminal domain
1111116EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
12222211Ribosomal protein L23
1111318Pyridoxal-dependent decarboxylase, C-terminal sheet domain
1221129Ribosomal protein L5
66667637Pyridoxal-dependent decarboxylase conserved domain
32332215Citrate synthase, C-terminal domain
55555530GHMP kinases N terminal domain
87758641Biotin carboxylase, N-terminal domain
2111117Tryptophan synthase alpha chain
1310111211966Pyridoxal-phosphate dependent enzyme
14161415151387NUDIX domain
75558636pfkB family carbohydrate kinase
51043628Glycosyl hydrolases family 28
1113Luciferase-like monooxygenase
22232213Ribosomal protein L3
22222212Ribosomal protein L11, RNA binding domain
15161214141384Histidine phosphatase superfamily (branch 1)
1111116Thymidylate synthase
1113Lipoxygenase
44444424ATP synthase alpha/beta chain, C terminal domain
55555429Calponin homology (CH) domain
44535425Glutamine amidotransferases class-II
22222212Ribosomal protein S15
11'Cold-shock' DNA-binding domain
1111116Thaumatin family
22221110Fructose-1-6-bisphosphatase, N-terminal domain
1111116Ribonucleotide reductase, all-alpha domain
22222212Ribosomal protein S2
21222211SRF-type transcription factor (DNA-binding and dimerisation domain)
76678640GATA zinc finger
555339154136239Amino acid permease
55465530Prolyl oligopeptidase family
32232315Ribosomal protein L30p/L7e
10118910654Histidine phosphatase superfamily (branch 2)
1111116Respiratory-chain NADH dehydrogenase, 30 Kd subunit
65544428Aconitase family (aconitate hydratase)
65456430Glycosyl hydrolase family 10
23424318Glycosyl hydrolases family 17
22222212Ribosomal protein S5, N-terminal domain
1111116Nucleoside diphosphate kinase
112Tetraspanin family
112217Ribosomal protein S10p/S20e
55455428Arrestin (or S-antigen), N-terminal domain
1111116Phosphoglucose isomerase
1111116Carbohydrate phosphorylase
1111116SecY translocase
1111116Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222212Ribosomal protein L6
33453321Polyprenyl synthetase
55545529Hexokinase
8106117648Dynamin family
11Biopterin-dependent aromatic amino acid hydroxylase
1114119Transcription factor TFIID (or TATA-binding protein, TBP)
65438430Rieske [2Fe-2S] domain
213Phytochrome region
989710851Biotin-requiring enzyme
1111116Phosphofructokinase
21222211Ribosomal protein S17
1111217Hydroxymethylglutaryl-coenzyme A reductase
33333318FGGY family of carbohydrate kinases, N-terminal domain
112Sodium:dicarboxylate symporter family
171197131269Enoyl-CoA hydratase/isomerase
22222212Ribosomal protein S9/S16
22223213Transcription factor TFIIB repeat
87677540Cytidine and deoxycytidylate deaminase zinc-binding region
1111217Molybdopterin oxidoreductase
46664632Chromo (CHRromatin Organisation MOdifier) domain
33233317Phosphatidylinositol-specific phospholipase C, Y domain
33243419Phosphatidylinositol-specific phospholipase C, X domain
1498910858D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
22222212Malic enzyme, N-terminal domain
11PEP-utilising enzyme, mobile domain
11212296-phosphogluconate dehydrogenase, C-terminal domain
1213151410468Multicopper oxidase
813910121163WW domain
1112117Ribosomal RNA adenine dimethylase
21222211Yeast PIR protein repeat
116110118105134103686WD domain, G-beta repeat
75455430Heavy-metal-associated domain
35344423Adenylate kinase
22232213Phosphoglucomutase/phosphomannomutase, C-terminal domain
22122211Ribosomal protein S8
22221110Ribosomal protein S11
44444424LIM domain
2211118Matrixin
22142213Regulator of chromosome condensation (RCC1) repeat
22222212Ribosomal protein S13/S18
22322213chorismate binding enzyme
4443432260s Acidic ribosomal protein
64444426Prenyltransferase and squalene oxidase repeat
65646633Protein kinase C terminal domain
1111116Single-strand binding protein family
1111116S-adenosylmethionine synthetase, N-terminal domain
887710848Bromodomain
1616149161485Acyl-CoA dehydrogenase, C-terminal domain
14151618151593Ubiquitin carboxyl-terminal hydrolase
1111116Ribosomal protein L36
22222111Ribonuclease T2 family
32233316HSF-type DNA-binding
22222212SRP54-type protein, GTPase domain
1111116Urease alpha-subunit, N-terminal domain
1014111112462Serine carboxypeptidase
88888848Phosphatidylinositol 3- and 4-kinase
42113112Transketolase, thiamine diphosphate binding domain
44433422Glycosyl hydrolases family 11
75435327Inositol monophosphatase family
44434423Glutaredoxin
43323318Isocitrate lyase family
22222212Serine hydroxymethyltransferase
44444323Iron-containing alcohol dehydrogenase
22222212Ribosomal protein L10
45344323KOW motif
111115Ribosomal protein L34
11Negative factor, (F-Protein) or Nef
32232214RF-1 domain
43212214Sodium:solute symporter family
1111116Imidazoleglycerol-phosphate dehydratase
1111116DNA polymerase family A
1111116IMP dehydrogenase / GMP reductase domain
1111116Glucose-6-phosphate dehydrogenase, NAD binding domain
66667536Protein phosphatase 2C
23333317Nucleotidyl transferase
33343319Carbonic anhydrase
1113118Phosphoribulokinase / Uridine kinase family
75467433Fatty acid desaturase
66666636MutS domain V
1111116Delta-aminolevulinic acid dehydratase
64446327Arginase family
66676637MCM P-loop domain
22232213Squalene/phytoene synthase
810788950FHA domain
544741345038264AMP-binding enzyme
44464426G-protein alpha subunit
979118852HMG (high mobility group) box
182112172516109His Kinase A (phospho-acceptor) domain
33333318Armadillo/beta-catenin-like repeat
30233194223158Tetratricopeptide repeat
34323217Ion transport protein
1111116DNA gyrase/topoisomerase IV, subunit A
1313127121168BRCA1 C Terminus (BRCT) domain
78766640Glycosyl transferases group 1
34324319Glycosyl transferase family 2
12442316SAM domain (Sterile alpha motif)
1111116linker histone H1 and H5 family
1111116Ribosomal protein L7/L12 C-terminal domain
85116223Pectate lyase
112228ribonuclease
1111116Urease, gamma subunit
44444424CoA-ligase
191825312011124Phosphopantetheine attachment site
33333318Formyl transferase
1097109853Metallopeptidase family M24
1312112151568Leucine Rich Repeat
493929135231213alpha/beta hydrolase fold
33333318RNA polymerase Rpb2, domain 6
34444423PB1 domain
22222212Staphylococcal nuclease homologue
12121212111271Rab-GTPase-TBC domain
1111116Tudor domain
1111116WH1 domain
44455325Zinc finger, ZZ type
33233317HRDC domain
91088101055CBS domain
22222212Ribosomal protein L13
22222212Ribosomal protein L4/L1 family
1111116Clp protease
22432316S1 RNA binding domain
1111116HIUase/Transthyretin family
57445429AhpC/TSA family
44444424tRNA synthetases class I (W and Y)
1111116UvrD/REP helicase N-terminal domain
56496636Rhodanese-like domain
22222212Universal stress protein family
525135294928244Acetyltransferase (GNAT) family
1111116SecE/Sec61-gamma subunits of protein translocation complex
1111116C-terminal regulatory domain of Threonine dehydratase
22222212AIR synthase related protein, N-terminal domain
88879848tRNA synthetase class II core domain (G, H, P, S and T)
22222212SpoU rRNA Methylase family
11Phage integrase family
22222212Tetrapyrrole (Corrin/Porphyrin) Methylases
1111116Glycosyl transferase family, a/b domain
2111117PDZ domain
107447638Class II Aldolase and Adducin N-terminal domain
44344423Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
55555530Fes/CIP4, and EFC/F-BAR homology domain
44535627IQ calmodulin-binding motif
22222212Phosphoinositide 3-kinase family, accessory domain (PIK domain)
65645531Phospholipase D Active site motif
1114119Regulator of G protein signaling domain
33333318GTPase-activator protein for Ras-like GTPase
44444424RasGEF domain
44444424RasGEF N-terminal motif
89888849RhoGAP domain
66666636RhoGEF domain
35253321SPRY domain
33333318RNA polymerase Rpb1, domain 2
1111116Guanylate kinase
54433423Gelsolin repeat
1188781153UBA/TS-N domain
18171812181699PHD-finger
1111116GGL domain
55555429HECT-domain (ubiquitin-transferase)
11311310Helix-hairpin-helix motif
1111116MSP (Major sperm protein) domain
46629633Ribonuclease III domain
22252215Region in Clathrin and VPS
22222212RanBP1 domain
22222212PPIC-type PPIASE domain
1111217Zn-finger in Ran binding protein and others
1720158231497Zinc finger C-x8-C-x5-C-x3-H type (and similar)
33342217Poly(ADP-ribose) polymerase catalytic domain
2112129Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
779342239868401F-box domain
1111116Elongation factor 1 gamma, conserved domain
33333318Calpain family cysteine protease
22231212Copper fist DNA binding domain
56655532CRAL/TRIO domain
161710502213128BTB/POZ domain
22221110Ricin-type beta-trefoil lectin domain
1111116Inhibitor of Apoptosis domain
34444322Voltage gated chloride channel
24234116Caspase domain
1513113151370GDSL-like Lipase/Acylhydrolase
1111116Poly-adenylate binding protein, unique domain
1113POLO box duplicated region
282415182114120ABC transporter transmembrane region
99579544FAD binding domain
9106710345Condensation domain
1111116S-adenosyl-L-homocysteine hydrolase, NAD binding domain
1111116HAMP domain
22222212ribosomal L5P family C-terminus
65565734Insulinase (Peptidase family M16)
33333318Dehydrogenase E1 component
1111116Lumazine binding domain
66666636Elongation factor G C-terminus
11RNA dependent RNA polymerase
44545426HMGL-like
44444424DnaJ central domain
31323214Starch binding domain
32232214Ribosomal protein L1p/L10e family
1096109852Cation transporting ATPase, C-terminus
1298810653Cation transporter/ATPase, N-terminus
2111218dUTPase
65544428Aconitase C-terminal domain
44334321Amino acid kinase family
1111116N-(5'phosphoribosyl)anthranilate (PRA) isomerase
22241921169111Acyl transferase domain
1111116Urease beta subunit
127346537Dihydrodipicolinate synthetase family
403431173629187haloacid dehalogenase-like hydrolase
95449233Glycosyl hydrolases family 2
121868181375Glycosyl hydrolases family 18
1111116Proliferating cell nuclear antigen, N-terminal domain
11Translation initiation factor IF-3, C-terminal domain
1111116Acylphosphatase
1111116Adenylosuccinate synthetase
33213113Asparaginase, N-terminal
13121210Peptidase S24-like
2111117Inorganic pyrophosphatase
8712178860Glycosyl hydrolases family 16
23443117Glycosyl hydrolases family 15
58369435NADH:flavin oxidoreductase / NADH oxidase family
222133133-hydroxyacyl-CoA dehydrogenase, C-terminal domain
43333218Glycosyl hydrolase family 20, catalytic domain
44454627HhH-GPD superfamily base excision DNA repair protein
1111116AIR carboxylase
273124233112148GMC oxidoreductase
22333215Asparagine synthase
10101478958Fungal cellulose binding domain
66666636Septin
1111217EF-1 guanine nucleotide exchange domain
1111116Homoserine dehydrogenase
41122212Flavin-binding monooxygenase-like
11LPXTG cell wall anchor motif
33333318tRNA synthetases class I (E and Q), catalytic domain
23212111tRNA synthetases class I (R)
45444425XPG N-terminal domain
181012912667Metallo-beta-lactamase superfamily
3212210F5/8 type C domain
23222314Choline/Carnitine o-acyltransferase
1111116Putative esterase
1111116Ferrochelatase
22222212Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1111116Arginosuccinate synthase
1111116Electron transfer flavoprotein FAD-binding domain
33333318RNB domain
77446432Dioxygenase
33333318CNH domain
1122118Diacylglycerol kinase catalytic domain
910677746Dual specificity phosphatase, catalytic domain
33332317P21-Rho-binding domain
12141413131177PX domain
23323316Ras association (RalGDS/AF-6) domain
56566634UBX domain
44444424VHS domain
1111116Phosphoinositide 3-kinase C2
23322214DAHP synthetase I family
109789750Carbon-nitrogen hydrolase
22212110N-acetyltransferase
1111116Prephenate dehydratase
22PKD domain
44434423Syntaxin
55545529Pumilio-family RNA binding repeat
68766740Histone-like transcription factor (CBF/NF-Y) and archaeal histone
1111116Pterin binding enzyme
22222212ER lumen protein retaining receptor
22222212Glycoprotease family
2111117Histidinol dehydrogenase
44444424impB/mucB/samB family
111115
1111116Ribosomal L15
1114119Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
111115Ribosomal L28 family
1111116Ribosomal L29 protein
1111116Ribosomal L39 protein
1111116Ribosomal S17
1111116Ribulose-phosphate 3 epimerase family
1111116Translationally controlled tumour protein
55364326Glycosyl hydrolase family 7
1111116RNA pseudouridylate synthase
44444424Histone deacetylase domain
118498444POT family
1121117PWWP domain
202417262412123SET domain
1086712649Isochorismatase family
33334319Permease family
1111116Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
55457531XPG I-region
1111116Acetokinase family
32133113DNA photolyase
111115NlpC/P60 family
1113Nitroreductase family
52124115Sulfatase
11111166,7-dimethyl-8-ribityllumazine synthase
1111116Ribosomal protein S16
22222212Acyl CoA binding protein
44444424Cullin family
11111059854FAD binding domain
1010122324685O-methyltransferase domain
33335522EamA-like transporter family
2222210
88888848ThiF family
1111116Ribosomal family S4e
119358541Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
56345326Ammonium Transporter Family
65466431Sulfate permease family
1112117MATH domain
42122213Dehydratase family
2111117Transaldolase/Fructose-6-phosphate aldolase
22222212Mechanosensitive ion channel
1112117GTP cyclohydrolase II
11111163,4-dihydroxy-2-butanone 4-phosphate synthase
44344423Adaptor complexes medium subunit family
66567535Exonuclease
22222212Dipeptidyl peptidase IV (DPP IV) N-terminal region
254213NB-ARC domain
2513101213780Glycosyl hydrolase family 3 N terminal domain
1111116Ribosomal protein L44
11Sodium:sulfate symporter transmembrane region
1111116DNA-dependent RNA polymerase
1221219FAD binding domain in molybdopterin dehydrogenase
1111116Glycosyl transferase family 4
31222111HCO3- transporter family
23222213Nucleosome assembly protein (NAP)
44444424Synaptobrevin
1111116GMP synthase C terminal domain
111115Phage lysozyme
67545229Adenosine/AMP deaminase
1178510748Oxidoreductase FAD-binding domain
22264218Thioesterase domain
22222212Histidine biosynthesis protein
33333318Glycosyltransferase family 20
112UDP-glucose/GDP-mannose dehydrogenase family, central domain
22222212Carbamoyl-phosphate synthase small chain, CPSase domain
4223314PAS fold
23222213Probable molybdopterin binding domain
44444424Sec1 family
22222212GDP dissociation inhibitor
77779643Sodium/hydrogen exchanger family
22222212RNA polymerase Rpb3/RpoA insert domain
55544528Initiation factor 2 subunit family
11PQQ enzyme repeat
22222212Electron transfer flavoprotein domain
1111116Uricase
1111116Ribosomal S3Ae family
1111116Ribosomal L27 protein
111111