PFAM Domains • Phyllosticta citrichinaensis CBS 130529 v1.0
Annotations/GenomesAplpr1Botdo1_1Dipse1Macph1Neopa1Phcit1Phcitr1Phycit1Sacpr1TotalAnnotation Description
PFAMs
8,19810,8907,6169,4228,5059,0358,8437,2837,32377,115
22157 transmembrane receptor (rhodopsin family)
1127 transmembrane receptor (Secretin family)
526345504644414139421ATPase family associated with various cellular activities (AAA)
425741544432322933364ABC transporter
44454444437ATP synthase alpha/beta family, nucleotide-binding domain
11EGF-like domain
141414141416161414130Elongation factor Tu GTP binding domain
101291671010101094Helix-loop-helix DNA-binding domain
23343333226Hsp20/alpha crystallin family
7797714127777Hsp70 protein
89999889978KH domain
11111117SH2 domain
232217211815132222173SH3 domain
101091191010101089Actin
10213532623112103521440Ankyrin repeat
7353111122PAN domain
77667767760ADP-ribosylation factor family
121717201814151216141Eukaryotic aspartyl protease
44333444433Cyclic nucleotide-binding domain
11Cytochrome b(C-terminal)/b6/petD
11Cytochrome b/b6/petB
11111222112Cytochrome c
113211211Double-stranded RNA binding motif
2021171920331919141EF hand
1222211114Fe-4S binding domain
12212112214Fibronectin type III domain
11111117Globin
142111171610101211122Glutathione S-transferase, C-terminal domain
11112111110Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
613295446756Homeodomain
22222222218lactate/malate dehydrogenase, NAD binding domain
111115Low-density lipoprotein receptor repeat class B
11Lectin C-type domain
45555444440Myosin head (motor domain)
90259117227199736968651,167Cytochrome P450
106139931069210210397105943Protein kinase domain
131817172111111112131Pyridine nucleotide-disulphide oxidoreductase
232421222023232222200Ras family
182616221119181819167Response regulator receiver domain
499204864266RNase H
666255585456546359527RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
67114Reverse transcriptase (RNA-dependent DNA polymerase)
22222332220Copper/zinc superoxide dismutase (SODC)
22221222217Iron/manganese superoxide dismutases, alpha-hairpin domain
5169111110117787Subtilase family
5611175919955535150641Sugar (and other) transporter
9910991110101087Thioredoxin
12111118Trypsin
45455434438Tubulin/FtsZ family, GTPase domain
45332114225von Willebrand factor type A domain
587242534123195153412Zinc finger, C2H2 type
5354304030574342304Zinc finger, C3HC4 type (RING finger)
6981611225362Zinc knuckle
22221222217Protein-tyrosine phosphatase
122201116167158767484971,095short chain dehydrogenase
5611659948949464748604Zinc-binding dehydrogenase
56566665550Thiolase, N-terminal domain
20361144298888172Beta-ketoacyl synthase, N-terminal domain
665643355432Fe-2S iron-sulfur cluster binding domain
1111111119Enolase, C-terminal TIM barrel domain
33Cytochrome C and Quinol oxidase polypeptide I
22Cytochrome C oxidase subunit II, periplasmic domain
89897888974Glutamine amidotransferase class-I
1010101010910101089TCP-1/cpn60 chaperonin family
22ATP synthase A chain
24332222222Glutamine synthetase, catalytic domain
22222222218Triosephosphate isomerase
141815191618181312143E1-E2 ATPase
877881288874Core histone H2A/H2B/H3/H4
1113Copper binding proteins, plastocyanin/azurin family
48898333450Alpha amylase, catalytic domain
22222222117Phorbol esters/diacylglycerol binding domain (C1 domain)
71381010667774Bacterial transferase hexapeptide (six repeats)
33333553331tRNA synthetases class I (I, L, M and V)
76665888660Cyclin, N-terminal domain
245129474426242423292Carboxylesterase family
44444445437DNA polymerase family B
54444444437ATP synthase subunit C
79799444457Peroxidase
1016111315656486Beta-lactamase
333333321C-5 cytosine-specific DNA methylase
112NADH dehydrogenase
232320242022222321198Calcineurin-like phosphoesterase
11141311121111911103Cellulase (glycosyl hydrolase family 5)
77677777762tRNA synthetases class II (D, K and N)
353834353837363837328Mitochondrial carrier protein
1113recA bacterial DNA recombination protein
202615181714141415153Aminotransferase class I and II
98888448865Phosphoribosyl transferase domain
10101010101010101090Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11121111110Phosphoglycerate kinase
22222222218Ribosomal protein S4/S9 N-terminal domain
22222222218Ribosomal protein S12/S23
11Bacterial regulatory helix-turn-helix proteins, AraC family
1111111119Chaperonin 10 Kd subunit
91111111099111192C2 domain
181917201811121818151PH domain
1017714813138797bZIP transcription factor
192722232714151313173Aldehyde dehydrogenase family
159210731161029696120951,067Fungal Zn(2)-Cys(6) binuclear cluster domain
202721212418191923192Cytochrome b5-like Heme/Steroid binding domain
3645611430Oxidoreductase molybdopterin binding domain
152214171611111215133Oxidoreductase NAD-binding domain
263122272028282525232SNF2 family N-terminal domain
22222222218Ribosomal protein S7p/S5e
222019202122222223191Ubiquitin-conjugating enzyme
77787666660Isocitrate/isopropylmalate dehydrogenase
22222222218Ribosomal Proteins L2, RNA binding domain
1111111119Hsp90 protein
22222222218Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111111119Dihydrofolate reductase
68454445343Chitin recognition protein
35456233233Cysteine-rich secretory protein family
1111111119Ribosomal protein S3, C-terminal domain
15244443330Cupin
22222222218Annexin
223211112Eukaryotic-type carbonic anhydrase
11Chalcone and stilbene synthases, N-terminal domain
343443333302-oxoacid dehydrogenases acyltransferase (catalytic domain)
44353333432Catalase
111111118Disintegrin
1113118UDP-glucoronosyl and UDP-glucosyl transferase
7109799108574Aminotransferase class-III
22222222218Ribosomal protein S19
1111111119DNA gyrase B
78678545555Thiamine pyrophosphate enzyme, central domain
45444444336Lyase
22222222218Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1113Sodium:neurotransmitter symporter family
1111111119Adenylate and Guanylate cyclase catalytic domain
1111111119ATP synthase delta (OSCP) subunit
22122111113Orotidine 5'-phosphate decarboxylase / HUMPS family
1111111119Indole-3-glycerol phosphate synthase
111211119Aromatic amino acid lyase
1111111119Pyruvate kinase, barrel domain
1011101010101010990Kinesin motor domain
292722212425242631229DnaJ domain
151414141414141414127Proteasome subunit
10141299777984Major intrinsic protein
1111111119ATP synthase
56465334339Glycosyl hydrolase family 1
11111111193'5'-cyclic nucleotide phosphodiesterase
1111111119Profilin
11121222214Ribosomal protein L22p/L17e
21222222217Ribosomal protein L14p/L23e
912111191010121195Ubiquitin family
33444444434Cofilin/tropomyosin-type actin-binding protein
2224223222114-3-3 protein
35445224332Alkaline phosphatase
24254111121Zinc carboxypeptidase
213633393621202020246Aldo/keto reductase family
161791411541313102Myb-like DNA-binding domain
44443554437Forkhead domain
44454222128Glycosyl hydrolases family 32 N-terminal domain
11111221111Ribosomal protein L16p/L10e
33111222318Ribosomal protein S14p/S29e
44534444436FKBP-type peptidyl-prolyl cis-trans isomerase
1111111119Glutathione peroxidase
232222114
7128711666871Flavodoxin
1111111119Calreticulin family
712121011443366Common central domain of tyrosinase
711688986770Aminotransferase class-V
1111111119Ribonucleotide reductase, small chain
414033383049453939354DEAD/DEAH box helicase
758468746575697173654Helicase conserved C-terminal domain
12121111111EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22222222218Ribosomal protein L23
13233222220Pyridoxal-dependent decarboxylase, C-terminal sheet domain
12222222116Ribosomal protein L5
77668555655Pyridoxal-dependent decarboxylase conserved domain
33333332326Citrate synthase, C-terminal domain
57545555546GHMP kinases N terminal domain
69888767766Biotin carboxylase, N-terminal domain
12222111113Tryptophan synthase alpha chain
121513131011111110106Pyridoxal-phosphate dependent enzyme
14161313912121312114NUDIX domain
44343444434pfkB family carbohydrate kinase
9910810555566Glycosyl hydrolases family 28
1111331112Luciferase-like monooxygenase
22222222218Ribosomal protein L3
22222222218Ribosomal protein L11, RNA binding domain
121212111113131212108Histidine phosphatase superfamily (branch 1)
1111111119Thymidylate synthase
11Lipoxygenase
44444444436ATP synthase alpha/beta chain, C terminal domain
44554454540Calponin homology (CH) domain
56556336645Glutamine amidotransferases class-II
22222333221Ribosomal protein S15
111111118Thaumatin family
1111111119Fructose-1-6-bisphosphatase, N-terminal domain
11211111110Ribonucleotide reductase, all-alpha domain
22222222218Ribosomal protein S2
23222222219SRF-type transcription factor (DNA-binding and dimerisation domain)
99572888662GATA zinc finger
375838424716163131316Amino acid permease
35343443332Prolyl oligopeptidase family
22212222116Ribosomal protein L30p/L7e
101111101099101191Histidine phosphatase superfamily (branch 2)
21111111110Respiratory-chain NADH dehydrogenase, 30 Kd subunit
56585444445Aconitase family (aconitate hydratase)
26255111225Glycosyl hydrolase family 10
56777124544Glycosyl hydrolases family 17
22222222218Ribosomal protein S5, N-terminal domain
111111118Nucleoside diphosphate kinase
111111118Tetraspanin family
11111221111Ribosomal protein S10p/S20e
58365445242Arrestin (or S-antigen), N-terminal domain
1111111119Phosphoglucose isomerase
1111111119Carbohydrate phosphorylase
1111111119SecY translocase
11121111110Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222223219Ribosomal protein L6
493107333345Polyprenyl synthetase
45464555442Hexokinase
10968610105569Dynamin family
11111111210Transcription factor TFIID (or TATA-binding protein, TBP)
46453434437Rieske [2Fe-2S] domain
111111118Phytochrome region
415Proton-conducting membrane transporter
811888898876Biotin-requiring enzyme
1111111119Phosphofructokinase
1111111119Ribosomal protein S17
12112111111Hydroxymethylglutaryl-coenzyme A reductase
34444333331FGGY family of carbohydrate kinases, N-terminal domain
81791212988891Enoyl-CoA hydratase/isomerase
22121222216Ribosomal protein S9/S16
32322222220Transcription factor TFIIB repeat
79976877868Cytidine and deoxycytidylate deaminase zinc-binding region
1111111119Molybdopterin oxidoreductase
66393445444Chromo (CHRromatin Organisation MOdifier) domain
22222222218Phosphatidylinositol-specific phospholipase C, Y domain
33333333327Phosphatidylinositol-specific phospholipase C, X domain
817111113998894D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
22222222218Malic enzyme, N-terminal domain
243422224256-phosphogluconate dehydrogenase, C-terminal domain
92016222115151413145Multicopper oxidase
10119998591181WW domain
1111111119Ribosomal RNA adenine dimethylase
121217Yeast PIR protein repeat
1071068910584102102104102901WD domain, G-beta repeat
47476455446Heavy-metal-associated domain
46433333332Adenylate kinase
32222332221Phosphoglucomutase/phosphomannomutase, C-terminal domain
41111221215Ribosomal protein S8
12222221115Ribosomal protein S11
44333444433LIM domain
1113Matrixin
21121442219Regulator of chromosome condensation (RCC1) repeat
22222222218Ribosomal protein S13/S18
11NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
22121222216chorismate binding enzyme
3333333332760s Acidic ribosomal protein
44444444436Prenyltransferase and squalene oxidase repeat
56666446548Protein kinase C terminal domain
1111111119Single-strand binding protein family
1111111119S-adenosylmethionine synthetase, N-terminal domain
77787777764Bromodomain
71710141311111213108Acyl-CoA dehydrogenase, C-terminal domain
151614161515151615137Ubiquitin carboxyl-terminal hydrolase
11111117Ribosomal protein L36
23333333326Ribonuclease T2 family
43333333328HSF-type DNA-binding
22222222218SRP54-type protein, GTPase domain
1111111119Urease alpha-subunit, N-terminal domain
91714141311111112112Serine carboxypeptidase
88888888872Phosphatidylinositol 3- and 4-kinase
22222222218Transketolase, thiamine diphosphate binding domain
112116Glycosyl hydrolases family 11
45554444439Inositol monophosphatase family
44444444436Glutaredoxin
67677223343Isocitrate lyase family
22222222117Serine hydroxymethyltransferase
44344324331Iron-containing alcohol dehydrogenase
22222222218Ribosomal protein L10
34443334230KOW motif
11114Ribosomal protein L34
11Ribosomal protein L33
2212333319RF-1 domain
36525655340Sodium:solute symporter family
1111111119Imidazoleglycerol-phosphate dehydratase
1111111119DNA polymerase family A
1111111119IMP dehydrogenase / GMP reductase domain
1111111119Glucose-6-phosphate dehydrogenase, NAD binding domain
56566666652Protein phosphatase 2C
33333332326Nucleotidyl transferase
13222111114Carbonic anhydrase
1111111119Phosphoribulokinase / Uridine kinase family
597118666664Fatty acid desaturase
66556666652MutS domain V
1111111119Delta-aminolevulinic acid dehydratase
58464444443Arginase family
66667666655MCM P-loop domain
22222332220Squalene/phytoene synthase
811785789669FHA domain
418140756238403842457AMP-binding enzyme
43333333328G-protein alpha subunit
79846788865HMG (high mobility group) box
22NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
11Cytochrome c oxidase subunit III
14211317615151616133His Kinase A (phospho-acceptor) domain
33333223325Armadillo/beta-catenin-like repeat
202323252015142221183Tetratricopeptide repeat
44344555539Ion transport protein
1111111119DNA gyrase/topoisomerase IV, subunit A
10118121077111288BRCA1 C Terminus (BRCT) domain
67696445653Glycosyl transferases group 1
44374225637Glycosyl transferase family 2
13221223319SAM domain (Sterile alpha motif)
1111111119linker histone H1 and H5 family
1111111119Ribosomal protein L7/L12 C-terminal domain
66466222337Pectate lyase
45364111227ribonuclease
1111111119Urease, gamma subunit
44444444436CoA-ligase
254214453018181315220Phosphopantetheine attachment site
32212222218Formyl transferase
78899998875Metallopeptidase family M24
1413111311451514100Leucine Rich Repeat
3372375349762735319alpha/beta hydrolase fold
33343324328RNA polymerase Rpb2, domain 6
33333333327PB1 domain
22222222218Staphylococcal nuclease homologue
911111291212101197Rab-GTPase-TBC domain
1111111119Tudor domain
1111111119WH1 domain
34344333431Zinc finger, ZZ type
2213122215HRDC domain
9101011977101184CBS domain
22222222218Ribosomal protein L13
22222222218Ribosomal protein L4/L1 family
1111111119Clp protease
34444333533S1 RNA binding domain
1111111119HIUase/Transthyretin family
56545446544AhpC/TSA family
46565554444tRNA synthetases class I (W and Y)
1121211211UvrD/REP helicase N-terminal domain
54454785547Rhodanese-like domain
22121222216Universal stress protein family
344432373120182222260Acetyltransferase (GNAT) family
211111119SecE/Sec61-gamma subunits of protein translocation complex
1111111119C-terminal regulatory domain of Threonine dehydratase
22222222218AIR synthase related protein, N-terminal domain
88888768869tRNA synthetase class II core domain (G, H, P, S and T)
2212222215SpoU rRNA Methylase family
22222222218Tetrapyrrole (Corrin/Porphyrin) Methylases
22212222217Glycosyl transferase family, a/b domain
11111112211PDZ domain
67366443544Class II Aldolase and Adducin N-terminal domain
34342444331Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
55545555544Fes/CIP4, and EFC/F-BAR homology domain
54474225639IQ calmodulin-binding motif
22222222218Phosphoinositide 3-kinase family, accessory domain (PIK domain)
44454335436Phospholipase D Active site motif
11111551117Regulator of G protein signaling domain
33333333327GTPase-activator protein for Ras-like GTPase
44444444436RasGEF domain
44343433432RasGEF N-terminal motif
98887888872RhoGAP domain
56564656649RhoGEF domain
22232524325SPRY domain
33332333326RNA polymerase Rpb1, domain 2
1111111119Guanylate kinase
44444333433Gelsolin repeat
101171176410874UBA/TS-N domain
1714614812121618117PHD-finger
1111111119GGL domain
66665666653HECT-domain (ubiquitin-transferase)
23122112216Helix-hairpin-helix motif
1111111119MSP (Major sperm protein) domain
65564334440Ribonuclease III domain
21221552222Region in Clathrin and VPS
23232222220RanBP1 domain
22222112216PPIC-type PPIASE domain
21111112111Zn-finger in Ran binding protein and others
201614141111101618130Zinc finger C-x8-C-x5-C-x3-H type (and similar)
211111119Poly(ADP-ribose) polymerase catalytic domain
1111111119Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
827532442811114641370F-box domain
1111111119Elongation factor 1 gamma, conserved domain
23232222220Calpain family cysteine protease
2211222214Copper fist DNA binding domain
55456555545CRAL/TRIO domain
243328151953412816257BTB/POZ domain
1111111119Inhibitor of Apoptosis domain
34444444435Voltage gated chloride channel
12111111211Caspase domain
111291111777782GDSL-like Lipase/Acylhydrolase
1111111119Poly-adenylate binding protein, unique domain
1111116POLO box duplicated region
11NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
193019221914141314164ABC transporter transmembrane region
161522Integrase core domain
6107810555763FAD binding domain
1123325175668104Condensation domain
1111111119S-adenosyl-L-homocysteine hydrolase, NAD binding domain
1111111119HAMP domain
22222222218ribosomal L5P family C-terminus
66665656652Insulinase (Peptidase family M16)
34334333329Dehydrogenase E1 component
1111111119Lumazine binding domain
66655666652Elongation factor G C-terminus
474105444446HMGL-like
44444444436DnaJ central domain
21111111110Starch binding domain
2232