Due to a planned NERSC power outage, JGI portals will be unavailable 6:00am PDT July 10 - 11:59pm PDT July 14. System Status updates available here.
PFAM Domains • Zymoseptoria brevis Zb18110
Annotations/GenomesCerzm1Clafu1Dotse1Mycfi2Mycgr3Sepmu1Seppo1Zasce1Zymar1Zymbr1Zymps1TotalAnnotation Description
PFAMs
8,2508,8778,1108,2796,4207,5277,17611,5767,8679,7678,12391,972
117 transmembrane receptor (Secretin family)
4449454942413952434544493ATPase family associated with various cellular activities (AAA)
3846324043323443354239424ABC transporter
4443444445444ATP synthase alpha/beta family, nucleotide-binding domain
112EGF-like domain
1414141414141414141714157Elongation factor Tu GTP binding domain
1214141310131213101211134Helix-loop-helix DNA-binding domain
2222222233325Hsp20/alpha crystallin family
78777778710782Hsp70 protein
88899978981093KH domain
112Ribulose bisphosphate carboxylase large chain, catalytic domain
1111111119SH2 domain
1923212123232322201419228SH3 domain
1010101079910101010105Actin
444137414131286547954438Ankyrin repeat
91665141111431998PAN domain
7777777767776ADP-ribosylation factor family
1312101319111019222124174Eukaryotic aspartyl protease
4444444444444Cyclic nucleotide-binding domain
1113Cytochrome b(C-terminal)/b6/petD
1111111111111Cytochrome c
412232322122Double-stranded RNA binding motif
181917182019172017318186EF hand
12111111212144Fe-4S binding domain
3333342332433Fibronectin type III domain
11111117Globin
1820211816141135201623212Glutathione S-transferase, C-terminal domain
1111111111111Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
4764356654555Homeodomain
3223233522229lactate/malate dehydrogenase, NAD binding domain
11Low-density lipoprotein receptor repeat class B
5555545455553Myosin head (motor domain)
881227891737463176668571987Cytochrome P450
1291171051061131181111211391361331,328Protein kinase domain
1623161915131335121112185Pyridine nucleotide-disulphide oxidoreductase
2326242424232428242525270Ras family
1922252022222123232324244Response regulator receiver domain
154532154434RNase H
6269656257595961575059660RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
123Reverse transcriptase (RNA-dependent DNA polymerase)
1331222211119Copper/zinc superoxide dismutase (SODC)
2222222223223Iron/manganese superoxide dismutases, alpha-hairpin domain
1012489641291612102Subtilase family
63795591935144154627469835Sugar (and other) transporter
111112101010912101211118Thioredoxin
4222111221220Trypsin
3443433343438Tubulin/FtsZ family, GTPase domain
2344133331330von Willebrand factor type A domain
5142614762464779411446536Zinc finger, C2H2 type
606952513948476250356537Zinc finger, C3HC4 type (RING finger)
2936531286752Zinc knuckle
2222222222222Protein-tyrosine phosphatase
12815913313812498833051231051301,526short chain dehydrogenase
65676060684941136525663717Zinc-binding dehydrogenase
7666765656666Thiolase, N-terminal domain
1514101014131226101712153Beta-ketoacyl synthase, N-terminal domain
534646610534562Fe-2S iron-sulfur cluster binding domain
1111111211112Enolase, C-terminal TIM barrel domain
426Cytochrome C and Quinol oxidase polypeptide I
11Cytochrome C oxidase subunit II, periplasmic domain
89108889989894Glutamine amidotransferase class-I
1010101010101010101010110TCP-1/cpn60 chaperonin family
112ATP synthase A chain
2323222522227Glutamine synthetase, catalytic domain
2222222212221Triosephosphate isomerase
1112101113121214121612135E1-E2 ATPase
8876628209676111Core histone H2A/H2B/H3/H4
11Bacterial regulatory helix-turn-helix protein, lysR family
1414111313121218121313145Alpha amylase, catalytic domain
2232222342428Phorbol esters/diacylglycerol binding domain (C1 domain)
987109910889794Bacterial transferase hexapeptide (six repeats)
4444654344446tRNA synthetases class I (I, L, M and V)
7766767668672Cyclin, N-terminal domain
1627172217161451171618231Carboxylesterase family
344444444439DNA polymerase family B
4545545555552ATP synthase subunit C
3443433643441Peroxidase
1212101110662510910121Beta-lactamase
3332133333330C-5 cytosine-specific DNA methylase
112NADH dehydrogenase
3126272627202131242429286Calcineurin-like phosphoesterase
109874551969688Cellulase (glycosyl hydrolase family 5)
7777777877778tRNA synthetases class II (D, K and N)
3937383840383743394040429Mitochondrial carrier protein
111115recA bacterial DNA recombination protein
1315151513151722131516169Aminotransferase class I and II
89989108895992Phosphoribosyl transferase domain
1212121212121213121213134Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111111111111Phosphoglycerate kinase
2112112212116Ribosomal protein S4/S9 N-terminal domain
2322222222223Ribosomal protein S12/S23
1113Bacterial regulatory helix-turn-helix proteins, AraC family
1111111111111Chaperonin 10 Kd subunit
121414131313131213813138C2 domain
1617181717171717181018182PH domain
9998888167117100bZIP transcription factor
2626222018151540181918237Aldehyde dehydrogenase family
151106152121104123112317103107891,485Fungal Zn(2)-Cys(6) binuclear cluster domain
2726262424232029242425272Cytochrome b5-like Heme/Steroid binding domain
4673554554553Oxidoreductase molybdopterin binding domain
1217191412141123121014158Oxidoreductase NAD-binding domain
2625232426222424262927276SNF2 family N-terminal domain
2222222211119Ribosomal protein S7p/S5e
2327262524232224212322260Ubiquitin-conjugating enzyme
88899889108994Isocitrate/isopropylmalate dehydrogenase
2222222222222Ribosomal Proteins L2, RNA binding domain
1111111111111Hsp90 protein
2222222222222Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111111111111Dihydrofolate reductase
232115115Chitin recognition protein
6534455733348Cysteine-rich secretory protein family
1111111111111Ribosomal protein S3, C-terminal domain
5934634946457Cupin
2222222222222Annexin
22221222217Eukaryotic-type carbonic anhydrase
11114Chalcone and stilbene synthases, N-terminal domain
33333333333332-oxoacid dehydrogenases acyltransferase (catalytic domain)
5663344634347Catalase
1111111111111Disintegrin
1124UDP-glucoronosyl and UDP-glucosyl transferase
89969881089892Aminotransferase class-III
2222222222222Ribosomal protein S19
1111111111111DNA gyrase B
898104541765581Thiamine pyrophosphate enzyme, central domain
5444533855551Lyase
2222222222222Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
2211111110Sodium:neurotransmitter symporter family
1111111111111Adenylate and Guanylate cyclase catalytic domain
1111111111111ATP synthase delta (OSCP) subunit
1111111111111Orotidine 5'-phosphate decarboxylase / HUMPS family
1111111111111Indole-3-glycerol phosphate synthase
11Neurohypophysial hormones, N-terminal Domain
111115Aromatic amino acid lyase
1111111111111Pyruvate kinase, barrel domain
1010101111101010131013118Kinesin motor domain
3127262828282530323032317DnaJ domain
1414141414141414141514155Proteasome subunit
111211111098141099114Major intrinsic protein
1111111111111ATP synthase
33242421223Glycosyl hydrolase family 1
11111111111113'5'-cyclic nucleotide phosphodiesterase
11Protease inhibitor/seed storage/LTP family
1111111111111Profilin
1111111112112Ribosomal protein L22p/L17e
2222222222222Ribosomal protein L14p/L23e
122216171010916171319161Ubiquitin family
4344244444441Cofilin/tropomyosin-type actin-binding protein
222222222322314-3-3 protein
6534344642445Alkaline phosphatase
6632333455545Zinc carboxypeptidase
2327283322211855222325297Aldo/keto reductase family
181715171216152018516169Myb-like DNA-binding domain
4554645656555Forkhead domain
4525433644646Glycosyl hydrolases family 32 N-terminal domain
1111111112112Ribosomal protein L16p/L10e
3323122323327Ribosomal protein S14p/S29e
4444444444444FKBP-type peptidyl-prolyl cis-trans isomerase
1111111111111Glutathione peroxidase
222222212219
8889866777882Flavodoxin
1113Protamine P1
11Tropomyosin
1111111111111Calreticulin family
108811711915121313117Common central domain of tyrosinase
10129849811911899Aminotransferase class-V
1111111111111Ribonucleotide reductase, small chain
4141394246404042434641461DEAD/DEAH box helicase
7573737572737272787578816Helicase conserved C-terminal domain
112Fructose-bisphosphate aldolase class-I
1111111111111EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
2222222122221Ribosomal protein L23
1112211121215Pyridoxal-dependent decarboxylase, C-terminal sheet domain
2222222222222Ribosomal protein L5
5556755677765Pyridoxal-dependent decarboxylase conserved domain
3232322235330Citrate synthase, C-terminal domain
5555555555555GHMP kinases N terminal domain
8777677766674Biotin carboxylase, N-terminal domain
1111111111111Tryptophan synthase alpha chain
1113101111111111101211122Pyridoxal-phosphate dependent enzyme
1616141415131317141213157NUDIX domain
6547566665662pfkB family carbohydrate kinase
51345255912253Glycosyl hydrolases family 28
1111222227223Luciferase-like monooxygenase
2122222222221Ribosomal protein L3
2222122212119Ribosomal protein L11, RNA binding domain
1216151611141216161716161Histidine phosphatase superfamily (branch 1)
1111111111111Thymidylate synthase
2211111222217Lipoxygenase
4444444444444ATP synthase alpha/beta chain, C terminal domain
5555555554554Calponin homology (CH) domain
6464444862452Glutamine amidotransferases class-II
2222222222222Ribosomal protein S15
1111111111111Thaumatin family
1111111211112Fructose-1-6-bisphosphatase, N-terminal domain
111111111110Ribonucleotide reductase, all-alpha domain
2222222222222Ribosomal protein S2
3224332322228SRF-type transcription factor (DNA-binding and dimerisation domain)
8979888898890GATA zinc finger
4547354833383782321534446Amino acid permease
5533255645548Prolyl oligopeptidase family
1111111211112Ribosomal protein L30p/L7e
8101010799149910105Histidine phosphatase superfamily (branch 2)
1111111111111Respiratory-chain NADH dehydrogenase, 30 Kd subunit
4556545864557Aconitase family (aconitate hydratase)
22112222216Glycosyl hydrolase family 10
3866165642653Glycosyl hydrolases family 17
2222222222222Ribosomal protein S5, N-terminal domain
1111111111111Nucleoside diphosphate kinase
1111211112113Ribosomal protein S10p/S20e
2222222234225Arrestin (or S-antigen), N-terminal domain
1111111111111Phosphoglucose isomerase
1111111111111Carbohydrate phosphorylase
1111111111111SecY translocase
1111111111111Respiratory-chain NADH dehydrogenase, 49 Kd subunit
2222222222222Ribosomal protein L6
3334544534341Polyprenyl synthetase
4343333422334Hexokinase
555566613710573Dynamin family
1111211122215Transcription factor TFIID (or TATA-binding protein, TBP)
6675555864562Rieske [2Fe-2S] domain
11Phytochrome region
235Proton-conducting membrane transporter
10998898988894Biotin-requiring enzyme
1111111111111Phosphofructokinase
1222222222221Ribosomal protein S17
2111111111112Hydroxymethylglutaryl-coenzyme A reductase
4444444444444FGGY family of carbohydrate kinases, N-terminal domain
1111116Sodium:dicarboxylate symporter family
2523222016131133171719216Enoyl-CoA hydratase/isomerase
2222222222222Ribosomal protein S9/S16
2222222222222Transcription factor TFIIB repeat
8578888998987Cytidine and deoxycytidylate deaminase zinc-binding region
1111111111111Molybdopterin oxidoreductase
6955255755559Chromo (CHRromatin Organisation MOdifier) domain
3333333333333Phosphatidylinositol-specific phospholipase C, Y domain
5555555556556Phosphatidylinositol-specific phospholipase C, X domain
7910868821888101D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
1221221222219Malic enzyme, N-terminal domain
22222112222206-phosphogluconate dehydrogenase, C-terminal domain
1317131488728897132Multicopper oxidase
97899881198995WW domain
1111111111111Ribosomal RNA adenine dimethylase
266553471948Yeast PIR protein repeat
1001021061011041021001091031081041,139WD domain, G-beta repeat
3433344333336Heavy-metal-associated domain
3543234534440Adenylate kinase
1222211213118Phosphoglucomutase/phosphomannomutase, C-terminal domain
1121111212114Ribosomal protein S8
1111111112112Ribosomal protein S11
4444455444446LIM domain
11Matrixin
2111211212216Regulator of chromosome condensation (RCC1) repeat
2222222222222Ribosomal protein S13/S18
11NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
2222222222222chorismate binding enzyme
324333333333360s Acidic ribosomal protein
4544444543445Prenyltransferase and squalene oxidase repeat
7676477654564Protein kinase C terminal domain
111111111110Single-strand binding protein family
1111111111111S-adenosylmethionine synthetase, N-terminal domain
7888676967678Bromodomain
231816141511820131314165Acyl-CoA dehydrogenase, C-terminal domain
1718151715171716151817182Ubiquitin carboxyl-terminal hydrolase
111111118Ribosomal protein L36
2122222222221Ribonuclease T2 family
11Gonadotropin-releasing hormone
3333333333333HSF-type DNA-binding
2222222222222SRP54-type protein, GTPase domain
1111111111111Urease alpha-subunit, N-terminal domain
91814161311917131614150Serine carboxypeptidase
8888888888888Phosphatidylinositol 3- and 4-kinase
2222222322223Transketolase, thiamine diphosphate binding domain
222111221115Glycosyl hydrolases family 11
4444444444545Inositol monophosphatase family
4344244444441Glutaredoxin
3434233842339Isocitrate lyase family
2222222222222Serine hydroxymethyltransferase
3333421543435Iron-containing alcohol dehydrogenase
2221221222119Ribosomal protein L10
3233622442435KOW motif
11114Ribosomal protein L34
11Ribosomal protein L33
3233233323229RF-1 domain
2542233522333Sodium:solute symporter family
1111111111111Imidazoleglycerol-phosphate dehydratase
111111111110DNA polymerase family A
1111111111111IMP dehydrogenase / GMP reductase domain
1111111111111Glucose-6-phosphate dehydrogenase, NAD binding domain
6666655666664Protein phosphatase 2C
3223222232225Nucleotidyl transferase
2332222512226Carbonic anhydrase
1111211112113Phosphoribulokinase / Uridine kinase family
5545666667662Fatty acid desaturase
6666666666666MutS domain V
1111111111111Delta-aminolevulinic acid dehydratase
4444444744447Arginase family
6666666666666MCM P-loop domain
2132222223223Squalene/phytoene synthase
11Bacterial extracellular solute-binding proteins, family 5 Middle
11Bacterial extracellular solute-binding proteins, family 3
7888588989886FHA domain
112NADH-ubiquinone/plastoquinone oxidoreductase chain 6
7378645551483981535555652AMP-binding enzyme
3333433333435G-protein alpha subunit
7776776787877HMG (high mobility group) box
112NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
11Cytochrome c oxidase subunit III
1517221418181619212021201His Kinase A (phospho-acceptor) domain
2222322232325Armadillo/beta-catenin-like repeat
2327212523232322241422247Tetratricopeptide repeat
2333432333433Ion transport protein
1111111111111DNA gyrase/topoisomerase IV, subunit A
91110810881311711106BRCA1 C Terminus (BRCT) domain
7777477797978Glycosyl transferases group 1
5657474743557Glycosyl transferase family 2
1111411111114SAM domain (Sterile alpha motif)
1111111111111linker histone H1 and H5 family
1111111111111Ribosomal protein L7/L12 C-terminal domain
2312222322223Pectate lyase
2111111211113ribonuclease
1111111111111Urease, gamma subunit
4444444444444CoA-ligase
2729182115222133182620250Phosphopantetheine attachment site
4453444444444Formyl transferase
71091088811101010101Metallopeptidase family M24
131412161614141517315149Leucine Rich Repeat
475446412333309940943465alpha/beta hydrolase fold
3333333333333RNA polymerase Rpb2, domain 6
3334333433335PB1 domain
2222222222222Staphylococcal nuclease homologue
1011111111111112111111121Rab-GTPase-TBC domain
1111111111111Tudor domain
1111111111111WH1 domain
3552333633339Zinc finger, ZZ type
111111121111HRDC domain
109109911912989105CBS domain
2222222222222Ribosomal protein L13
2222222222222Ribosomal protein L4/L1 family
1111111111111Clp protease
4434344344441S1 RNA binding domain
1111111111111HIUase/Transthyretin family
5353644533344AhpC/TSA family
4445544445548tRNA synthetases class I (W and Y)
1212111121215UvrD/REP helicase N-terminal domain
5665555658561Rhodanese-like domain
2222222222222Universal stress protein family
3437314024302663272129362Acetyltransferase (GNAT) family
1111111111111SecE/Sec61-gamma subunits of protein translocation complex
1111111111111C-terminal regulatory domain of Threonine dehydratase
2222222222222AIR synthase related protein, N-terminal domain
7776777776775tRNA synthetase class II core domain (G, H, P, S and T)
22222222